Methods and compositions for inhibition of membrane fusion-associated events, including HIV transmission

ABSTRACT

Parainfluenza virus types 1 to 4 (PIV1 to PIV4) are important human pathogens that cause upper and lower respiratory tract infections, particularly in infants and children. The claimed invention is directed toward novel methods for the inhibition of parainfluenza virus transmission to a cell involving the administration of synthetic peptide fusion inhibitors. These inhibitors are derived from the parainfluenza virus and vary in length between 16 to 39 amino acids. The peptides were identified by screening for the presence of fusion inhibitory motifs (e.g., ALLMOTI5, 107x178x4, and PLZIP) within the parainfluenza virus genome. A number of peptides were identified and their fusion inhibitory activities ascertained. These peptides should provide useful antiviral agents.

This is a division of application Ser. No. 08/470,896, filed Jun. 6,1995, which is a continuation-in-part of Ser. No. 08/360,107, filed Dec.20, 1994, now U.S. Pat. No. 6,017,536 which is a continuation-in-part ofSer. No. 08/255,208, filed Jun. 7, 1994, which is a continuation-in-partof Ser. No. 08/073,028, filed Jun. 7, 1993, now U.S. Pat. No. 5,464,933each of which is incorporated by reference in its entirety.

This invention was made with Government support under Grant No.AI-30411-02 awarded by the National Institutes of Health. The Governmenthas certain rights in the invention.

1. INTRODUCTION

The present invention relates, first, to DP178 (SEQ ID NO:1), a peptidecorresponding to amino acids 638 to 673 of the HIV-1_(LAI) transmembraneprotein (TM) gp41, and portions or analogs of DP178 (SEQ ID NO:1), whichexhibit anti-membrane fusion capability, antiviral activity, such as theability to inhibit HIV transmission to uninfected CD-4+ cells, or anability to modulate intracellular processes involving coiled-coilpeptide structures. Further, the invention relates to the use of DP178(SEQ ID NO:1) and DP178 portions and/or analogs as antifusogenic orantiviral compounds or as inhibitors of intracellular events involvingcoiled-coil peptide structures. The present invention also relates topeptides analogous to DP107 (SEQ ID NO:25), a peptide corresponding toamino acids 558 to 595 of the HIV-1_(LAI) transmembrane protein -(TM)gp41, having amino acid sequences present in other viruses, such asenveloped viruses, and/or other organisms, and further relates to theuses of such peptides. These peptides exhibit anti-membrane fusioncapability, antiviral activity, or the ability to modulate intracellularprocesses involving coiled-coil peptide structures. The presentinvention additionally relates to methods for identifying compounds thatdisrupt the interaction between DP178 and DP107, and/or betweenDP107-like and DP178-like peptides. Further, the invention relates tothe use of the peptides of the invention as diagnostic agents. Forexample, a DP178 peptide may be used as an HIV subtype-specificdiagnostic. The invention is demonstrated, first, by way of an Examplewherein DP178 (SEQ ID:1), and a peptide whose sequence is homologous toDP178 are each shown to be potent, non-cytotoxic inhibitors of HIV-1transfer to uninfected CD-4⁺ cells. The invention is furtherdemonstrated by Examples wherein peptides having structural and/or aminoacid motif similarity to DP107 and DP178 are identified in a variety ofviral and nonviral organisms, and in examples wherein a number of suchidentified peptides derived from several different viral systems aredemonstrated to exhibit antiviral activity.

2. BACKGROUND OF THE INVENTION 2.1 Membrane Fusion Events

Membrane fusion is a ubiquitous cell biological process (for a review,see White, J. M., 1992, Science 258:917-924). Fusion events whichmediate cellular housekeeping functions, such as endocytosis,constitutive secretion, and recycling of membrane components, occurcontinuously in all eukaryotic cells.

Additional fusion events occur in specialized cells. Intracellularly,for example, fusion events are involved in such processes as occur inregulated exocytosis of hormones, enzymes and neurotransmitters.Intercellularly, such fusion events feature prominently in, for example,sperm-egg fusion and myoblast fusion.

Fusion events are also associated with disease states. For example,fusion events are involved in the formation of giant cells duringinflammatory reactions, the entry of all enveloped viruses into cells,and, in the case of human immunodeficiency virus (HIV), for example, areresponsible for the virally induced cell-cell fusion which leads to celldeath.

2.2. The Human Immunodeficiency Virus

The human immunodeficiency virus (HIV) has been implicated as theprimary cause of the slowly degenerative immune system disease termedacquired immune deficiency syndrome (AIDS) (Barre-Sinoussi, F. et al.,1983, Science 220:868-870; Gallo, R. et al., 1984, Science 224:500-503).There are at least two distinct types of HIV: HIV-1 (Barre-Sinoussi, F.et al., 1983, Science 220:868-870; Gallo R. et al., 1984, Science224:500-503) and HIV-2 (Clavel, F. et al., 1986, Science 233:343-346;Guyader, M. et al., 1987, Nature 326:662-669). Further, a large amountof genetic heterogeneity exists within populations of each of thesetypes. Infection of human CD-4⁺ T-lymphocytes with an HIV virus leads todepletion of the cell type and eventually to opportunistic infections,neurological dysfunctions, neoplastic growth, and ultimately death.

HIV is a member of the lentivirus family of retroviruses (Teich, N. etal., 1984, RNA Tumor Viruses, Weiss, R. et al., eds., CSH-Press, pp.949-956). Retroviruses are small enveloped viruses that contain adiploid, single-stranded RNA genome, and replicate via a DNAintermediate produced by a virally-encoded reverse transcriptase, anRNA-dependent DNA polymerase (Varmus, H., 1988, Science 240:1427-1439).Other retroviruses include, for example, oncogenic viruses such as humanT-cell leukemia viruses (HTLV-I,-II,-III), and feline leukemia virus.

The HIV viral particle consists of a viral core, composed of capsidproteins, that contains the viral RNA genome and those enzymes requiredfor early replicative events. Myristylated Gag protein forms an outerviral shell around the viral core, which is, in turn, surrounded by alipid membrane enveloped derived from the infected cell membrane. TheHIV enveloped surface glycoproteins are synthesized as a single 160 Kdprecursor protein which is cleaved by a cellular protease during viralbudding into two glycoproteins, gp41 and gp120. gp41 is a transmembraneprotein and gp120 is an extracellular protein which remainsnon-covalently associated with gp4l, possibly in a trimeric ormultimeric form (Hammarskjold, M. and Rekosh, D., 1989, Biochem.Biophys. Acta 989:269-280).

HIV is targeted to CD-4⁺ cells because the CD-4 cell surface proteinacts as the cellular receptor for the HIV-1 virus (Dalgleish, A. et al.,1984, Nature 25 312:763-767; Klatzmann et al., 1984, Nature 312:767-768;Maddon et al., 1986, Cell 47:333-348). Viral entry into cells isdependent upon gp120 binding the cellular CD-4⁺ receptor molecules(McDougal, J. S. et al., 1986, Science 231:382-385; Maddon, P. J. etal., 1986, Cell 47:333-348) and thus explains HIV's tropism for CD-4⁺cells, while gp41 anchors the enveloped glycoprotein complex in theviral membrane.

2.3. HIV Treatment

HIV infection is pandemic and HIV associated diseases represent a majorworld health problem. Although considerable effort is being put into thesuccessful design of effective therapeutics, currently no curativeanti-retroviral drugs against AIDS exist. In attempts to develop suchdrugs, several stages of the HIV life cycle have been considered astargets for therapeutic intervention (Mitsuya, H. et al., 1991, FASEB J.5:2369-2381). For example, virally encoded reverse transcriptase hasbeen one focus of drug development. A number ofreverse-transcriptase-targeted drugs, including 2′,3′-dideoxynucleosideanalogs such as AZT, ddI, ddC, and d4T have been developed which havebeen shown to been active against HIV (Mitsuya, H. et al., 1991, Science249:1533-1544). While beneficial, these nucleoside analogs are notcurative, probably due to the rapid appearance of drug resistant HIVmutants (Lander, B. et al., 1989, Science 243:1731-1734). In addition,the drugs often exhibit toxic side effects such as bone marrowsuppression, vomiting, and liver function abnormalities.

Attempts are also being made to develop drugs which can inhibit viralentry into the cell, the earliest stage of HIV infection. Here, thefocus has thus far been on CD4, the cell surface receptor for HIV.Recombinant soluble CD4, for example, has been shown to inhibitinfection of CD-4⁺ T-cells by some HIV-1 strains (Smith, D. H. et al.,1987, Science 238:1704-1707). Certain primary HIV-1 isolates, however,are relatively less sensitive to inhibition by recombinant CD-4 (Daar,E. et al., 1990, Proc. Natl. Acad. Sci. USA 87:6574-6579). In addition,recombinant soluble CD-4 clinical trials have produced inconclusiveresults (Schooley, R. et al., 1990, Ann. Int. Med. 112:247-253; Kahn, J.O. et al., 1990, Ann. Int. Med. 112:254-261; Yarchoan, R. et al., 1989,Proc. Vth Int. Conf. on AIDS, p. 564, MCP 137).

The late stages of HIV replication, which involve crucial virus-specificsecondary processing of certain viral proteins, have also been suggestedas possible anti-HIV drug targets. Late stage processing is dependent onthe activity of a viral protease, and drugs are being developed whichinhibit this protease (Erickson, J., 1990, Science 249:527-533). Theclinical outcome of these candidate drugs is still in question.

Attention is also being given to the development of vaccines for thetreatment of HIV infection. The HIV-1 enveloped proteins (gp160, gp120,gp41) have been shown to be the major antigens for anti-HIV antibodiespresent in AIDS patients (Barin, et al., 1985, Science 228:1094-1096).Thus far, therefore, these proteins seem to be the most promisingcandidates to act as antigens for anti-HIV vaccine development. To thisend, several groups have begun to use various portions of gp160, gp120,and/or gp41 as immunogenic targets for the host immune system. See forexample, Ivanoff, L. et al., U.S. Pat. No. 5,141,867; Saith, G. et al.,WO 92/22,654; Shafferman, A., WO 91/09,872; Formoso, C. et al., WO90/07,119. Clinical results concerning these candidate vaccines,however, still remain far in the future.

Thus, although a great deal of effort is being directed to the designand testing of anti-retroviral drugs, a truly effective, non-toxictreatment is still needed.

3. SUMMARY OF THE INVENTION

The present invention relates, first, to DP178 (SEQ ID:1), a 36-aminoacid synthetic peptide corresponding to amino acids 638 to 673 of thetransmembrane protein (TM) gp41 from the HIV-1 isolate LAI(HIV-1_(LAI)), which exhibits potent anti-HIV-1 activity. As evidencedby the Example presented below, Section 6, the DP178 (SEQ ID:1)antiviral activity is so high that, on a weight basis, no other knownanti-HIV agent is effective at concentrations as low as those at whichDP178 (SEQ ID:1) exhibits its inhibitory effects.

The invention further relates to those portions and analogs of DP178which also show such antiviral activity, and/or show anti-membranefusion capability, or an ability to modulate intracellular processesinvolving coiled-coil peptide structures. The term “DP178 analog” refersto a peptide which contains an amino acid sequence corresponding to theDP178 peptide sequence present within the gp41 protein of HIV-L1_(LAI),but found in viruses and/or organisms other than HIV-1_(LAI). Such DP178analog peptides may, therefore, correspond to DP178-like amino acidsequences present in other viruses, such as, for example, envelopedviruses, such as retroviruses other than HIV-1_(LAI), as well asnon-enveloped viruses. Further, such analogous DP178 peptides may alsocorrespond to DP178-like amino acid sequences present in nonviralorganisms.

The invention further relates to peptides DP107 (SEQ ID NO:25) analogs.DP107 is a peptide corresponding to amino acids 558-595 of theHIV-1_(LAI) transmembrane protein (TM) gp41. The term “DP107 analog” asused herein refers to a peptide which contains an amino acid sequencecorresponding to the DP107 peptide sequence present within the gp41protein of HIV-1_(LAI), but found in viruses and organisms other thanHIV-1_(LAI). Such DP107 analog peptides may, therefore, correspond toDP107-like amino acid sequences present in other viruses, such as, forexample, enveloped viruses, such as retroviruses other than HIV-1_(LAI),as well as non-enveloped viruses. Further, such DP107 analog peptidesmay also correspond to DP107-like amino acid sequences present innonviral organisms.

Further, the peptides of the invention include DP107 analog and DP178analog peptides having amino acid sequences recognized or identified bythe 107x178x4, ALLMOTI5 and/or PLZIP search motifs described herein.

The peptides of the invention may, for example, exhibit antifusogenicactivity, antiviral activity, and/or may have the ability to modulateintracellular processes which involve coiled-coil peptide structures.With respect to the antiviral activity of the peptides of the invention,such an antiviral activity includes, but is not limited to theinhibition of HIV transmission to uninfected CD-4⁺ cells. Additionally,the antifusogenic capability, antiviral activity or intracellularmodulatory activity of the peptides of the invention merely requires thepresence of the peptides of the invention, and, specifically, does notrequire the stimulation of a host immune response directed against suchpeptides.

The peptides of the invention may be used, for example, as inhibitors ofmembrane fusion-asociated events, such as, for example, the inhibitionof human and non-human retroviral, especially HIV, transmission touninfected cells. It is further contemplated that the peptides of theinvention may be used as modulators of intracellular events involvingcoiled-coil peptide structures.

The peptides of the invention may, alternatively, be used to identifycompounds which may themselves exhibit antifusogenic, antiviral, orintracellular modulatory activity. Additional uses include, for example,the use of the peptides of the invention as organism or viral typeand/or subtype-specific diagnostic tools.

The terms “antifusogenic” and “anti-membrane fusion”, as used herein,refer to an agent's ability to inhibit or reduce the level of membranefusion events between two or more moieties relative to the level ofmembrane fusion which occurs between said moieties in the absence of thepeptide. The moieties may be, for example, cell membranes or viralstructures, such as viral envelopes or pili. The term “antiviral”, asused herein, refers to the compound's ability to inhibit viral infectionof cells, via, for example, cell-cell fusion or free virus infection.Such infection may involve membrane fusion, as occurs in the case ofenveloped viruses, or some other fusion event involving a viralstructure and a cellular structure (e.g., such as the fusion of a viralpilus and bacterial membrane during bacterial conjugation).

It is also contemplated that the peptides of the invention may exhibitthe ability to modulate intracellular events involving coiled-coilpeptide structures. “Modulate”, as used herein, refers to a stimulatoryor inhibitory effect on the intracellular process of interest relativeto the level or activity of such a process in the absence of a peptideof the invention.

Embodiments of the invention are demonstrated below wherein an extremelylow concentration of DP178 (SEQ ID:1), and very low concentrations of aDP178 homolog (SEQ ID:3) are shown to be potent inhibitors of HIV-1mediated CD-4⁺ cell-cell fusion (i.e., syncytial formation) andinfection of CD-4⁺ cells by cell-free virus. Further, it is shown thatDP178 (SEQ ID:1) is not toxic to cells, even at concentrations 3 logshigher than the inhibitory DP-178 (SEQ ID:1) concentration.

The present invention is based, in part, on the surprising discoverythat the DP107 and DP178 domains of the HIV gp41 protein non-covalentlycomplex with each other, and that their interaction is required for thenormal infectivity of the virus. This discovery is described in theExample presented, below, in Section 8. The invention, therefore,further relates to methods for identifying antifusogenic, includingantiviral, compounds that disrupt the interaction between DP107 andDP178, and/or between DP107-like and DP178-like peptides.

Additional embodiments of the invention (specifically, the Examplespresents in Sections 9-16 and 19-25, below) are demonstrated, below,wherein peptides, from a variety of viral and nonviral sources, havingstructural and/or amino acid motif similarity to DP107 and DP178 areidentified, and search motifs for their identification are described.

Further, Examples (in Sections 17, 18, 25-29) are presented wherein anumber of the peptides of the invention are demonstrated exhibitsubstantial antiviral activity or activity predictive of antiviralactivity.

3.1. Definitions

Peptides are defined herein as organic compounds comprising two or moreamino acids covalently joined by peptide bonds. Peptides may be referredto with respect to the number of constituent amino acids, i.e., adipeptide contains two amino acid residues, a tripeptide contains three,etc. Peptides containing ten or fewer amino acids may be referred to asoligopeptides, while those with more than ten amino acid residues arepolypeptides. Such peptides may also include any of the modificationsand additional amino and carboxy groups as are described herein.

Peptide sequences defined herein are represented by one-letter symbolsfor amino acid residues as follows:

-   A (alanine)-   R (arginine)-   N (asparagine)-   D (aspartic acid)-   C (cysteine)-   Q (glutamine)-   E (glutamic acid)-   G (glycine)-   H (histidine)-   I (isoleucine)-   L (leucine)-   K (lysine)-   M (methionine)-   F (phenylalanine)-   P (proline)-   S (serine)-   T (threonine)-   W (tryptophan)-   Y (tyrosine)-   V (valine)

4. BRIEF DESCRIPTION OF THE FIGURES

FIG. 1. Amino acid sequence of DP178 (SEQ ID:1) derived from HIV_(LAI);DP178 homologs derived from HIV-1_(SF2) (DP-185; SEQ ID:3), HIV-1_(RF)(SEQ ID:4), and HIV-1_(MN) (SEQ ID:5); DP178 homologs derived from aminoacid sequences of two prototypic HIV-2 isolates, namely, HIV-2_(rod)(SEQ ID:6) and HIV-2_(NIHZ) (SEQ ID:7); control peptides: DP-180 (SEQID:2), a peptide incorporating the amino acid residues of DP178 in ascrambled sequence; DP-118 (SEQ ID:10) unrelated to DP178, whichinhibits HIV-1 cell free virus infection; DP-125 (SEQ ID:8), unrelatedto DP178, also inhibits HIV-1 cell free virus infection; DP-116 (SEQID:9), unrelated to DP178, is negative for inhibition of HIV-1 infectionwhen tested using a cell-free virus infection assay. Throughout thefigures, the one letter amino acid code is used.

FIG. 2. Inhibition of HIV-1 cell-free virus infection by syntheticpeptides. IC₅₀ refers to the concentration of peptide that inhibits RTproduction 20 from infected cells by 50% compared to the untreatedcontrol. Control: the level of RT produced by untreated cell culturesinfected with the same level of virus as treated cultures.

FIG. 3. Inhibition of HIV-1 and HIV-2 cell-free virus infection by thesynthetic peptide DP178 (SEQ ID:1). IC₅₀: concentration of peptide thatinhibits RT production by 50% compared to the untreated control.Control: Level of RT produced by untreated cell cultures infected withthe same level of virus as treated cultures.

FIGS. 4A-4B. Fusion Inhibition Assays. FIG. 4A: DP178 (SEQ ID:1)inhibition of HIV-1 prototypic isolate-mediated syncytial formation;data represents the number of virus-induced syncytial per cell. FIG. 4B:DP-180 (SEQ ID:2) represents a scrambled control peptide; DP-185 (SEQID:3) represents a DP178 homolog derived from HIV-1_(SF2) isolate;Control, refers to the number of syncytial produced in the absence ofpeptide.

FIG. 5. Fusion inhibition assay: HIV-1 vs. HIV-2. Data represents thenumber of virus-induced syncytial per well. ND: not done.

FIG. 6. Cytotoxicity study of DP178 (SEQ ID:1) and DP-116 (SEQ ID:9) onCEM cells. Cell proliferation data is shown.

FIG. 7. Schematic representation of HIV-gp41 and maltose binding protein(MBP)-gp41 fusion proteins. DP107 and DP178 are synthetic peptides basedon the two putative helices of gp41. The letter P in the DP107 boxesdenotes an Ile to Pro mutation at amino acid number 578. Amino acidresidues are numbered according to Meyers et al., “Human Retrovirusesand AIDS”, 1991, Theoret. Biol. and Biophys. Group, Los Alamos Natl.Lab., Los Alamos, N. Mex. The proteins are more fully described, below,in Section 8.1.1.

FIG. 8. A point mutation alters the conformation and anti-HIV activityof M41.

FIG. 9. Abrogation of DP178 anti-HIV activity. Cell fusion assays werecarried out in the presence of 10 nM DP178 and various concentrations ofM41Δ1178 or M41PΔ178.

FIG. 10. Binding of DP178 to leucine zipper of gp41 analyzed by FAb-DELISA.

FIG. 11A-B. Models for a structural transition in the HIV-1 TM protein.Two models are proposed which indicate a structural transition from anative oligomer to a fusogenic state following a trigger event (possiblygp120 binding to CD4). Common features of both models include (1) thenative state is held together by noncovalent protein-proteininteractions to form the heterodimer of gp120/41 and other interactions,principally though gp41 interactive sites, to form homo-oligomers on thevirus surface of the gp120/41 complexes; (2) shielding of thehydrophobic fusogenic peptide at the N-terminus (F) in the native state;and (3) the leucine zipper domain (DP107) exists as a homo-oligomercoiled coil only in the fusogenic state. The major differences in thetwo models include the structural state (native or fusogenic) in whichthe DP107 and DP178 domains are complexed to each other. In the firstmodel (FIG. 11A) this interaction occurs in the native state and in thesecond (FIG. 11B), it occurs during the fusogenic state. When triggered,the fusion complex in the model depicted in (A) is generated throughformation of coiled-coil interactions in homologous DP107 domainsresulting in an extended α-helix. This conformational change positionsthe fusion peptide for interaction with the cell membrane. In the secondmodel (FIG. 11B), the fusogenic complex is stabilized by the associationof the DP178 domain with the DP107 coiled-coil.

FIG. 12. Motif design using heptad repeat positioning of amino acids ofknown coiled-coils.

FIG. 13. Motif design using proposed heptad repeat positioning of aminoacids of DP107 and DP178.

FIG. 14. Hybrid motif design crossing GCN4 and DP107.

FIG. 15. Hybrid motif design crossing GCN4 and DP178.

FIG. 16. Hybrid motif design 107x178x4, crossing DP107 and DP178. Thismotif was found to be the most consistent at identifying relevantDP107-like and DP178-like peptide regions.

FIG. 17. Hybrid motif design crossing GCN4, DP107, and DP178.

FIG. 18. Hybrid motif design ALLMOTI5 crossing GCN4, DP107, DP178, c-Fosc-Jun, c-Myc, and Flu Loop 36.

FIG. 19. PLZIP motifs designed to identify N-terminal proline-leucinezipper motifs.

FIG. 20. Search results for HIV-1 (BRU isolate) enveloped protein gp41.Sequence search motif designations: Spades (

): 107x178x4; Hearts (♥) ALLMOTI5; Clubs (

): PLZIP; Diamonds (

): transmembrane region (the putative transmembrane domains wereidentified using a PC/Gene program designed to search for such peptideregions). Asterisk (*): Lupas method. The amino acid sequencesidentified by each motif are bracketed by the respective characters.Representative sequences chosen based on 107x178x4 searches areunderlined and in bold. DP107 and DP178 sequences are marked, andadditionally double-underlined and italicized.

FIG. 21. Search results for human respiratory syncytial virus (RSV)strain A2 fusion glycoprotein F1. Sequence search motif designations areas in FIG. 20.

FIG. 22. Search results for simian immunodeficiency virus (SIV)enveloped protein gp41 (AGM3 isolate). Sequence search motifdesignations are as in FIG. 20.

FIG. 23. Search results for canine distemper virus (strainOnderstepoort) fusion glycoprotein 1. Sequence search motif designationsare as in FIG. 20.

FIG. 24. Search results for newcastle disease virus (strainAustralia-Victoria/32) fusion glycoprotein F1. Sequence search motifdesignations are as in FIG. 20.

FIG. 25. Search results for human parainfluenza 3 virus (strain NIH47885) fusion fglycoprotein F1. Sequence search motif designations areas in FIG. 20.

FIG. 26. Search results for influenza A virus (strain A/AICHI/2/68)hemagglutinin precursor HA2. Sequence search designations are as in FIG.20.

FIGS. 27A-D. Respiratory Syncytial Virus (RSV) peptide antiviral andcircular dichroism data. FIGS. 27A-B: Peptides derived from the F2DP178/DP107-like region. Antiviral and CD data. FIGS. 27C-D: Peptidesderived from the F1 DP107-like region. Peptide and CD data.

Antiviral activity (AV) is represented by the following qualitativesymbols:

“−”, negative antiviral activity;

“+/−”, antiviral activity at greater than 100 μg/ml;

“+”, antiviral activity at between 50-100 μg/ml;

“++”, antiviral activity at between 20-50 μg/ml;

“+++”, antiviral activity at between 1-20 μg/ml;

“++++”, antiviral activity at <1 μg/ml.

CD data, referring to the level of helicity is represented by thefollowing qualitative symbol:

“−”, no helicity;

“+”, 25-50% helicity;

“++”, 50-75% helicity;

“+++”, 75-100% helicity.

IC₅₀ refers to the concentration of peptide necessary to produce only50% of the number of syncytial relative to infected control culturescontaining no peptide. IC₅₀ values were obtained using purified peptidesonly.

FIGS. 28A-B. Respiratory Syncytial Virus (RSV) DP178-like region (F1)peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC50are as in FIGS. 27A-D. IC₅₀ values were obtained using purified peptidesonly.

FIGS. 29A-B. Peptides derived from the HPIV3 F1 DP107-like region.Peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC₅₀are as in FIGS. 27A-D. Purified peptides were used to obtain IC₅₀values, except where the values are marked by an asterisk (*), in whichcases, the IC₅₀ values were obtained using a crude peptide preparation.

FIGS. 30A-B. Peptides derived from the HPIV3 F1 DP178-like region.Peptide antiviral and CD data. Antiviral symbols, CD symbols, and IC₅₀are as in FIGS. 27A-D. Purified peptides were used to obtain IC₅₀values, except where the values are marked by an asterisk (*), in whichcases, the IC₅₀ values were obtained using a crude peptide preparation.

FIG. 31. Motif search results for simian immunodeficiency virus (SIV)isolate MM251, enveloped polyprotein gp41. Sequence search designationsare as in FIG. 20.

FIG. 32. Motif search results for Epstein-Barr Virus (Strain B95-8),glycoprotein gp110 precursor (designated gp115). BALF4. Sequence searchdesignations are as in FIG. 20.

FIG. 33. Motif search results for Epstein-Barr Virus (Strain B95-8),BZLF1 trans-activator protein (designated EB1 or Zebra). Sequence searchdesignations are as in FIG. 20. Additionally, “@” refers to a well knownDNA binding domain and “+” refers to a well known dimerization domain,as defined by Flemington and Speck (Flemington, E. and Speck, S. H.,1990, Proc. Natl. Acad. Sci. USA 87:9459-9463).

FIG. 34. Motif search results for measles virus (strain Edmonston),fusion glycoprotein F1. Sequence search designations are as in FIG. 20.

FIG. 35. Motif search results for Hepatitis B Virus (Subtype AYW), majorsurface antigen precursor S. Sequence search designations are as in FIG.20.

FIG. 36. Motif search results for simian Mason-Pfizer monkey virus,enveloped (TM) protein gp20. Sequence search designations are as in FIG.20.

FIG. 37. Motif search results for Pseudomonas aerginosa, fimbrialprotein (Pilin). Sequence search designations are as in FIG. 20.

FIG. 38. Motif search results for Neisseria gonorrhoeae fimbrial protein(Pilin). Sequence search designations are as in FIG. 20.

FIG. 39. Motif search results for Hemophilus influenzae fimbrialprotein. Sequence search designations are as in FIG. 20.

FIG. 40. Motif search results for Staphylococcus aureus, toxic shocksyndrome toxin-1. Sequence search designations are as in FIG. 20.

FIG. 41. Motif search results for Staphylococcus aureus enterotoxin TypeE. Sequence search designations are as in FIG. 20.

FIG. 42. Motif search results for Staphylococcus aureus enterotoxin A.Sequence search designations are as in FIG. 20.

FIG. 43. Motif search results for Escherichia coli, heat labileenterotoxin A. Sequence search designations are as in FIG. 20.

FIG. 44. Motif search results for human c-fos proto-oncoprotein.Sequence search designations are as in FIG. 20.

FIG. 45. Motif search results for human lupus KU autoantigen proteinP70. Sequence search designations are as in FIG. 20.

FIG. 46. Motif search results for human zinc finger protein 10. Sequencesearch designations are as in FIG. 20.

FIG. 47. Measles virus (MeV) fusion protein DP178-like region antiviraland CD data. Antiviral symbols, CD symbols, and IC₅₀ are as in FIGS.27A-D. IC₅₀ values were obtained using purified peptides.

FIG. 48. Simian immunodeficiency virus (SIV) TM (fusion) proteinDP178-like region antiviral data. Antiviral symbols are as in FIGS.27A-D “NT”, not tested.

FIGS. 49A-C. DP178-derived peptide antiviral data. The peptides listedherein were derived from the region surrounding the HIV-1 BRU isolateDP178 region (e.g., gp41 amino acid residues 615-717).

In instances where peptides contained DP178 point mutations, the mutatedamino acid residues are shown with a shaded background. In instances inwhich the test peptide has had an amino and/or carboxy-terminal groupadded or removed (apart from the standard amido- and acetyl-blockinggroups found on such peptides), such modifications are indicated. FIG.49A: The column to the immediate right of the name of the test peptideindicates the size of the test peptide and points out whether thepeptide is derived from a one amino acid peptide “walk” across the DP178region. The next column to the right indicates whether the test peptidecontains a point mutation, while the column to its right indicateswhether certain amino acid residues have been added to or removed fromthe DP178-derived amino acid sequence. FIG. 49B: The column to theimmediate right of the test peptide name indicates whether the peptiderepresents a DP178 truncation, the next column to the right points outwhether the peptide contains a point mutation, and the column to itsright indicates whether the peptide contains amino acids which have beenadded to or removed from the DP178 sequence itself. FIG. 49C: The columnto the immediate right of the test peptide name indicates whether thetest peptide contains a point mutation, while the column to its rightindicates whether amino acid residues have been added to or removed fromthe DP178 sequence itself. IC₅₀ is as defined in FIGS. 27A-D, and IC₅₀values were obtained using purified peptides except where marked with anasterisk (*), in which case the IC₅₀ was obtained using a crude peptidepreparation.

FIG. 50. DP107 and DP107 gp41 region truncated peptide antiviral data.IC₅₀ as defined in FIGS. 27A-D, and IC₅₀ values were obtained usingpurified peptides except where marked with an asterisk (*), in whichcase the IC₅₀ was obtained using a crude peptide preparation.

FIGS. 51A-B. Epstein-Barr virus Strain B95-8 BZLF1 DP178/DP107 analogregion peptide walks and electrophoretic mobility shift assay results.The peptides (T-423 to T-446, FIG. 51A; T-447 to T-461, FIG. 51B)represent one amino acid residue “walks” through the EBV Zebra proteinregion from amino acid residue 173 to 246.

The amino acid residue within this region which corresponds to the firstamino acid residue of each peptide is listed to the left of eachpeptide, while the amino acid residue within this region whichcorresponds to the last amino acid residue of each peptide is listed tothe right of each peptide. The length of each test peptide is listed atthe far right of each line, under the heading “Res”.

“ACT” refers to a test peptide's ability to inhibit Zebra binding to itsresponse element. “+” refers to a visible, but incomplete, abrogation ofthe response element/Zebra homodimer complex; “+++” refers to a completeabrogation of the complex; and “−” represents a lack of complexdisruption.

FIGS. 52A-B. Hepatitis B virus subtype AYW major surface antigenprecursor S protein DP178/DP107 analog region and peptide walks. 52Adepicts Domain I (S protein amino acid residues 174-220), which containsa potential DP178/DP107 analog region. In addition, peptides are listedwhich represent one amino acid peptide “walks” through domain I. 52Bdepicts Domain II (S protein amino acid residues 233-291), whichcontains a second potential DP178/DP107 analog region. In addition,peptides are listed which represent one amino acid peptide “walks”through domain II.

5. DETAILED DESCRIPTION OF THE INVENTION

Described herein are peptides which may exhibit antifusogenic activity,antiviral capability, and/or the ability to modulate intracellularprocesses involving coiled-coil peptide structures. The peptidesdescribed include, first, DP178 (SEQ ID NO:1), a gp41-derived 36 aminoacid peptide and fragments and analogs of DP178.

In addition, the peptides of the invention described herein includepeptides which are DP107 analogs. DP107 (SEQ ID NO:25) is a 38 aminoacid peptide corresponding to residues 558 to 595 of the HIV-1_(LAI)transmembrane (TM) gp41 protein. Such DP107 analogs may exhibitantifusogenic capability, antiviral activity or an ability to modulateintracellular processes involving coiled-coil structures.

Further, peptides of the invention include DP107 and DP178 are describedherein having amino acid sequences recognized by the 107x178x4,ALLMOTI5, and PLZIP search motifs. Such motifs are also discussed.

Also described here are antifusogenic, antiviral, intracellularmodulatory, and diagnostic uses of the peptides of the invention.Further, procedures are described for the use of the peptides of theinvention for the identification of compounds exhibiting antifusogenic,antiviral or intracellular modulatory activity.

While not limited to any theory of operation, the following model isproposed to explain the potent anti-HIV activity of DP178, based, inpart, on the experiments described in the Examples, infra. In the HIVprotein, gp41, DP178 corresponds to a putative α-helix region located inthe C-terminal end of the gp41 ectodomain, and appears to associate witha distal site on gp41 whose interactive structure is influenced by theleucine zipper motif, a coiled-coil structure, referred to as DP107. Theassociation of these two domains may reflect a molecular linkage or“molecular clasp” intimately involved in the fusion process. It is ofinterest that mutations in the C-terminal α-helix motif of gp41 (i.e.,the D178 domain) tend to enhance the fusion ability of gp41, whereasmutations in the leucine zipper region (i.e., the DP107 domain) decreaseor abolish the fusion ability of the viral protein. It may be that theleucine zipper motif is involved in membrane fusion while the C-terminalα-helix motif serves as a molecular safety to regulate the availabilityof the leucine zipper during virus-induced membrane fusion.

On the basis of the foregoing, two models are proposed of gp41-mediatedmembrane fusion which are schematically shown in FIGS. 11A-B. The reasonfor proposing two models is that the temporal nature of the interactionbetween the regions defined by DP107 and DP178 cannot, as yet, bepinpointed. Each model envisions two conformations for gp41—one in a“native” state as it might be found on a resting virion. The other in a“fusogenic” state to reflect conformational changes triggered followingbinding of gp120 to CD4 and just prior to fusion with the target cellmembrane. The strong binding affinity between gp120 and CD4 may actuallyrepresent the trigger for the fusion process obviating the need for a pHchange such as occurs for viruses that fuse within intracellularvesicles. The two major features of both models are: (1) the leucinezipper sequences (DP107) in each chain of oligomeric enveloped are heldapart in the native state and are only allowed access to one another inthe fusogenic state so as to form the extremely stable coiled-coils, and(2) association of the DP178 and DP107 sites as they exist in gp41 occureither in the native or fusogenic state. FIG. 11A depicts DP178/DP107interaction in the native state as a molecular clasp. On the other hand,if one assumes that the most stable form of the enveloped occurs in thefusogenic state, the model in FIG. 11B can be considered.

When synthesized as peptides, both DP107 and DP178 are potent inhibitorsof HIV infection and fusion, probably by virtue of their ability to formcomplexes with viral gp41 and interfere with its fusogenic process;e.g., during the structural transition of the viral protein from thenative structure to the fusogenic state, the DP178 and DP107 peptidesmay gain access to their respective binding sites on the viral gp41, andexert a disruptive influence. DP107 peptides which demonstrate anti-HIVactivity are described in Applicants' co-pending application Ser. No.08/264,531, filed Jun. 23, 1994, which is incorporated by referenceherein in its entirety.

As shown in the Examples, infra, a truncated recombinant gp41 proteincorresponding to the ectodomain of gp41 containing both DP107 and DP178domains (excluding the fusion peptide, transmembrane region andcytoplasmic domain of gp41) did not inhibit HIV-1 induced fusion.However, when a single mutation was introduced to disrupt thecoiled-coil structure of the DP107 domain—a mutation which results in atotal loss of biological activity of DP107 peptides—the inactiverecombinant protein was transformed to an active inhibitor of HIV-1induced fusion. This transformation may result from liberation of thepotent DP178 domain from a molecular clasp with the leucine zipper,DP107 domain.

For clarity of discussion, the invention will be described primarily forDP178 peptide inhibitors of HIV. However, the principles may beanalogously applied to other viruses, both enveloped and nonenveloped,and to other non-viral organisms.

5.1. DP178 and DP178-like Peptides

The DP178 peptide (SEQ ID:1) of the invention corresponds to amino acidresidues 638 to 673 of the transmembrane protein gp41 from theHIV-1_(LAI) isolate, and has the 36 amino acid sequence (reading fromamino to carboxy terminus):

-   NH₂-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:1)

In addition to the full-length DP178 (SEQ ID:1) 36-mer, the peptides ofthe invention may include truncations of the DP178 (SEQ ID:1) peptidewhich exhibit antifusogenic activity, antiviral activity and/or theability to modulate intracellular processes involving coiled-coilpeptide structures. Truncations of DP178 (SEQ ID:1) peptides maycomprise peptides of between 3 and 36 amino acid residues (i.e.,peptides ranging in size from a tripeptide to a 36-mer polypeptide), asshown in Tables I and IA, below. Peptide sequences in these tables arelisted from amino (left) to carboxy (right) terminus. “X” may representan amino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group.Alternatively, “X” may represent a hydrophobic group, including but notlimited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attachedmacromolecular group, including but not limited to a lipid-fatty acidconjugate, polyethylene glycol, carbohydrate or peptide group. Further,“Z” may represent an amido group; a T-butoxycarbonyl group; or acovalently attached macromolecular group, including but not limited to alipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptidegroup. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE I DP178 (SEQ ID: 1) CARBOXY TRUNCATIONS X-YTS-Z X-YTSL-Z X-YTSLI-ZX-YTSLIH-Z X-YTSLIHS-Z X-YTSLIHSL-Z X-YTSLIHSLI-Z X-YTSLIHSLIE-ZX-YTSLIHSLIEE-Z X-YTSLIHSLIEES-Z X-YTSLIHSLIEESQ-Z X-YTSLIHSLIEESQN-ZX-YTSLIHSLIEESQNQ-Z X-YTSLIHSLIEESQNQQ-Z X-YTSLIHSLIEESQNQQE-ZX-YTSLIHSLIEESQNQQEK-Z X-YTSLIHSLIEESQNQQEKN-Z X-YTSLIHSLIEESQNQQEKNE-ZX-YTSLIHSLIEESQNQQEKNEQ-Z X-YTSLIHSLIEESQNQQEKNEQE-ZX-YTSLIHSLIEESQNQQEKNEQEL-Z X-YTSLIHSLIEESQNQQEKNEQELL-ZX-YTSLIHSLIEESQNQQEKNEQELLE-Z X-YTSLIHSLIEESQNQQEKNEQELLEL-ZX-YTSLIHSLIEESQNQQEKNEQELLELD-Z X-YTSLIHSLIEESQNQQEKNEQELLELDK-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKW-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWA-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWAS-Z X-YTSLIHSLIEESQNQQEKNEQELLELDKWASL-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLW-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWN-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IA DP178 (SEQ ID: 1) AMINO TRUNCATIONS X-NWF-Z X-WNWF-Z X-LWNWF-ZX-SLWNWF-Z X-ASLWNWF-Z X-WASLWNWF-Z X-KWASLWNWF-Z X-DKWASLWNWF-ZX-LDKWASLWNWF-Z X-ELDKWASLWNWF-Z X-LELDKWASLWNWF-Z X-LLELDKWASLWNWF-ZX-ELLELDKWASLWNWF-Z X-QELLELDKWASLWNWF-Z X-EQELLELDKWASLWNWF-ZX-NEQELLELDKWASLWNWF-Z X-KNEQELLELDKWASLWNWF-Z X-EKNEQELLELDKWASLWNWF-ZX-QEKNEQELLELDKWASLWNWF-Z X-QQEKNEQELLELDKWASLWNWF-ZX-NQQEKNEQELLELDKWASLWNWF-Z X-QNQQEKNEQELLELDKWASLWNWF-ZX-SQNQQEKNEQELLELDKWASLWNWF-Z X-ESQNQQEKNEQELLELDKWASLWNWF-ZX-EESQNQQEKNEQELLELDKWASLWNWF-Z X-IEESQNQQEKNEQELLELDKWASLWNWF-ZX-LIEESQNQQEKNEQELLELDKWASLWNWF-Z X-SLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-HSLIEESQNQQEKNEQELLELDKWASLWNWF-Z X-IHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-LIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-SLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-TSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-ZX-YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl group; a macromolecular carriergroup including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP178-like peptides.“DP178-like”, as used herein, refers, first, to DP178 and DP178truncations which contain one or more amino acid substitutions,insertions and/or deletions. Second, “DP-178-like” refers to peptidesequences identified or recognized by the ALLMOTI5, 107x178x4 and PLZIPsearch motifs described herein, having structural and/or amino acidmotif similarity to DP178. The DP178-like peptides of the invention mayexhibit antifusogenic or antiviral activity, or may exhibit the abilityto modulate intracellular processes involving coiled-coil peptides.Further, such DP178-like peptides may possess additional advantageousfeatures, such as, for example, increased bioavailability, and/orstability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but thereexists a striking amino acid conservation within the DP178-correspondingregions of HIV-1 and HIV-2. The amino acid conservation is of a periodicnature, suggesting some conservation of structure and/or function.Therefore, one possible class of amino acid substitutions would includethose amino acid changes which are predicted to stabilize the structureof the DP178 peptides of the invention. Utilizing the DP178 and DP178analog sequences described herein, the skilled artisan can readilycompile DP178 consensus sequences and ascertain from these, conservedamino acid residues which would represent preferred amino acidsubstitutions.

The amino acid substitutions may be of a conserved or non-conservednature. Conserved amino acid substitutions consist of replacing one ormore amino acids of the DP178 (SEQ ID:1) peptide sequence with aminoacids of similar charge, size, and/or hydrophobicity characteristics,such as, for example, a glutamic acid (E) to aspartic acid (D) aminoacid substitution. Non-conserved substitutions consist of replacing oneor more amino acids of the DP178 (SEQ ID:1) peptide sequence with aminoacids possessing dissimilar charge, size, and/or hydrophobicitycharacteristics, such as, for example, a glutamic acid (E) to valine (V)substitution.

Amino acid insertions may consist of single amino acid residues orstretches of residues. The insertions may be made at the carboxy oramino terminal end of the DP178 or DP178 truncated peptides, as well asat a position internal to the peptide. Such insertions will generallyrange from 2 to 15 amino acids in length. It is contemplated thatinsertions made at either the carboxy or amino terminus of the peptideof interest may be of a broader size range, with about 2 to about 50amino acids being preferred. One or more such insertions may beintroduced into DP178 (SEQ.ID:1) or DP178 truncations, as long as suchinsertions result in peptides which may still be recognized by the107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may,alternatively, exhibit antifusogenic or antiviral activity, or exhibitthe ability to modulate intracellular processes involving coiled-coilpeptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging fromabout 2 to about 50 amino acid residues in length, corresponding to gp41protein regions either amino to or carboxy to the actual DP178 gp41amino acid sequence, respectively. Thus, a preferred amino terminal orcarboxy terminal amino acid insertion would contain gp41 amino acidsequences found immediately amino to or carboxy to the DP178 region ofthe gp41 protein.

Deletions of DP178 (SEQ ID:1) or DP178 truncations are also within thescope of the invention. Such deletions consist of the removal of one ormore amino acids from the DP178 or DP178-like peptide sequence, with thelower limit length of the resulting peptide sequence being 4 to 6 aminoacids. Such deletions may involve a single contiguous or greater thanone discrete portion of the peptide sequences. One or more suchdeletions may be introduced into DP178 (SEQ.ID:1) or DP178 truncations,as long as such deletions result in peptides which may still berecognized by the 107x178x4, ALLMOTI5 or PLZIP search motifs describedherein, or may, alternatively, exhibit antifusogenic or antiviralactivity, or exhibit the ability to modulate intracellular processesinvolving coiled-coil peptide structures.

DP178 analogs are further described, below, in Section 5.3.

5.2. DP107 and DP107-like Peptides

Further, the peptides of the invention include peptides having aminoacid sequences corresponding to DP107 analogs. DP107 is a 38 amino acidpeptide which exhibits potent antiviral activity, and corresponds toresidues 558 to 595 of HIV-L1_(LAI) transmembrane (TM) gp41 protein, asshown here:

-   NH₂-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-COOH (SEQ ID:25)

In addition to the full-length DP107 (SEQ ID:25) 38-mer, the peptides ofthe invention may include truncations of the DP107 (SEQ ID:25) peptidewhich exhibit antifusogenic activity, antiviral activity and/or theability to modulate intracellular processes involving coiled-coilpeptide structures. Truncations of DP107 (SEQ ID:25) peptides maycomprise peptides of between 3 and 38 amino acid residues (i.e.,peptides ranging in size from a tripeptide to a 38-mer polypeptide), asshown in Tables II and IIA, below. Peptide sequences in these tables arelisted from amino (left) to carboxy (right) terminus. “X” may representan amino group (—NH₂) and “Z” may represent a carboxyl (—COOH) group.Alternatively, “X” may represent a hydrophobic group, including but notlimited to carbobenzyl, dansyl, or T-butoxycarbonyl; an acetyl group; a9-fluorenylmethoxy-carbonyl (FMOC) group; or a covalently attachedmacromolecular group, including but not limited to a lipid-fatty acidconjugate, polyethylene glycol, carbohydrate or peptide group. Further,“Z” may represent an amido group; a T-butoxycarbonyl group; or acovalently attached macromolecular group, including but not limited to alipid-fatty acid conjugate, polyethylene glycol, carbohydrate or peptidegroup. A preferred “X” or “Z” macromolecular group is a peptide group.

TABLE II DP107 CARBOXY TRUNCATIONS X-NNL-Z X-NNLL-Z X-NNLLR-Z X-NNLLRA-ZX-NNLLRAI-Z X-NNLLRAIE-Z X-NNLLRAIEA-Z X-NNLLRAIEAQ-Z X-NNLLRAIEAQQ-ZX-NNLLRAIEAQQH-Z X-NNLLRAIEAQQHL-Z X-NNLLRAIEAQQHLL-ZX-NNLLRAIEAQQHLLQ-Z X-NNLLRAIEAQQHLLQL-Z X-NNLLRAIEAQQHLLQLT-ZX-NNLLRAIEAQQHLLQLTV-Z X-NNLLRAIEAQQHLLQLTVW-Z X-NNLLRAIEAQQHLLQLTVWQ-ZX-NNLLRAIEAQQHLLQLTVWQI-Z X-NNLLRAIEAQQHLLQLTVWQIK-ZX-NNLLRAIEAQQHLLQLTVWQIKQ-Z X-NNLLRAIEAQQHLLQLTVWQIKQL-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQ-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQA-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQAR-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQARI-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARIL-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQARILA-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAV-Z X-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVE-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVER-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERY-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYL-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLK-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKD-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-Z The one letter amino acidcode is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IIA DP178 (SEQ ID:25) AMINO TRUNCATIONS X-KDQ-Z X-LKDQ-Z X-YLKDQ-ZX-RYLKDQ-Z X-ERYLKDQ-Z X-VERYLKDQ-Z X-AVERYLKDQ-Z X-LAVERYLKDQ-ZX-ILAVERYLKDQ-Z X-RILAVERYLKDQ-Z X-ARILAVERYLKDQ-Z X-QARILAVERYLKDQ-ZX-LQARILAVERYLKDQ-Z X-QLQARILAVERYLKDQ-Z X-KQLQARILAVERYLKDQ-ZX-IKQLQARILAVERYLKDQ-Z X-QIKQLQARILAVERYLKDQ-Z X-WQIKQLQARILAVERYLKDQ-ZX-VWQIKQLQARILAVERYLKDQ-Z X-TVWQIKQLQARILAVERYLKDQ-ZX-LTVWQIKQLQARILAVERYLKDQ-Z X-QLTVWQIKQLQARILAVERYLKDQ-ZX-LQLTVWQIKQLQARILAVERYLKDQ-Z X-LLQLTVWQIKQLQARILAVERYLKDQ-ZX-HLLQLTVWQIKQLQARILAVERYLKDQ-Z X-QHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-QQHLLQLTVWQIKQLQARILAVERYLKDQ-Z X-AQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-EAQQHLLQLTVWQIKQLQARILAVERYLKDQ-Z X-IEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-AIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-RAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-LRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-LLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-NLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-ZX-NNLLRAIEAQQHLLQLTVWQIKQLQARILAVERYLKDQ-Z The one letter amino acidcode is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl group; a macromolecula carriergroup including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

The peptides of the invention also include DP107-like peptides.“DP107-like”, as used herein, refers, first, to DP107 and DP107truncations which contain one or more amino acid substitutions,insertions and/or deletions. Second, “DP-107-like” refers to peptidesequences identified or recognized by the ALLMOTI5, 107x178x4 and PLZIPsearch motifs described herein, having structural and/or amino acidmotif similarity to DP107. The DP107-like peptides of the invention mayexhibit antifusogenic or antiviral activity, or may exhibit the abilityto modulate intracellular processes involving coiled-coil peptides.Further, such DP107-like peptides may possess additional advantageousfeatures, such as, for example, increased bioavailability, and/orstability, or reduced host immune recognition.

HIV-1 and HIV-2 enveloped proteins are structurally distinct, but thereexists a striking amino acid conservation within the DP107-correspondingregions of HIV-1 and HIV-2. The amino acid conservation is of a periodicnature, suggesting some conservation of structure and/or function.Therefore, one possible class of amino acid substitutions would includethose amino acid changes which are predicted to stabilize the structureof the DP107 peptides of the invention. Utilizing the DP107 and DP107analog sequences described herein, the skilled artisan can readilycompile DP107 consensus sequences and ascertain from these, conservedamino acid residues which would represent preferred amino acidsubstitutions.

The amino acid substitutions may be of a conserved or non-conservednature. Conserved amino acid substitutions consist of replacing one ormore amino acids of the DP107 (SEQ ID:25) peptide sequence with aminoacids of similar charge, size, and/or hydrophobicity characteristics,such as, for example, a glutamic acid (E) to aspartic acid (D) aminoacid substitution. Non-conserved substitutions consist of replacing oneor more amino acids of the DP107 (SEQ ID:25) peptide sequence with aminoacids possessing dissimilar charge, size, and/or hydrophobicitycharacteristics, such as, for example, a glutamic acid (E) to valine (V)substitution.

Amino acid insertions may consist of single amino acid residues orstretches of residues. The insertions may be made at the carboxy oramino terminal end of the DP107 or DP107 truncated peptides, as well asat a position internal to the peptide. Such insertions will generallyrange from 2 to 15 amino acids in length. It is contemplated thatinsertions made at either the carboxy or amino terminus of the peptideof interest may be of a broader size range, with about 2 to about 50amino acids being preferred. One or more such insertions may beintroduced into DP107 (SEQ.ID:25) or DP107 truncations, as long as suchinsertions result in peptides which may still be recognized by the107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may,alternatively, exhibit antifusogenic or antiviral activity, or exhibitthe ability to modulate intracellular processes involving coiled-coilpeptide structures.

Preferred amino or carboxy terminal insertions are peptides ranging fromabout 2 to about 50 amino acid residues in length, corresponding to gp41protein regions either amino to or carboxy to the actual DP107 gp41amino acid sequence, respectively. Thus, a preferred amino terminal orcarboxy terminal amino acid insertion would contain gp41 amino acidsequences found immediately amino to or carboxy to the DP107 region ofthe gp41 protein.

Deletions of DP107 (SEQ ID:25) or DP178 truncations are also within thescope of the invention. Such deletions consist of the removal of one ormore amino acids from the DP107 or DP107-like peptide sequence, with thelower limit length of the resulting peptide sequence being 4 to 6 aminoacids. Such deletions may involve a single contiguous or greater thanone discrete portion of the peptide sequences One or more such deletionsmay be introduced into DP107 (SEQ.ID:25) or DP107 truncations, as longas such deletions result in peptides which may still be recognized bythe 107x178x4, ALLMOTI5 or PLZIP search motifs described herein, or may,alternatively, exhibit antifusogenic or antiviral activity, or exhibitthe ability to modulate intracellular processes involving coiled-coilpeptide structures.

DP107 and DP107 truncations are more fully described in Applicants'co-pending U.S. patent application Ser. No. 08/374,666, filed Jan. 27,1995, and which is incorporated herein by reference in its entirety.DP107 analogs are further described, below, in Section 5.3.

5.3. DP107 and DP178 Aanalogs

Peptides corresponding to analogs of the DP178, DP178 truncations, DP107and DP107 truncation sequences of the invention, described, above, inSections 5.1 and 5.2 may be found in other viruses, including, forexample, non-HIV-1_(LAI) enveloped viruses, non-enveloped viruses andother non-viral organisms.

The term “analog”, as used herein, refers to a peptide which isrecognized or identified via the 107x178x4, ALLMOTI5 and/or PLZIP searchstrategies discussed below. Further, such peptides may exhibitantifusogenic capability, antiviral activity, or the ability to modulateintracellular processes involving coiled-coil structures.

Such DP178 and DP107 analogs may, for example, correspond to peptidesequences present in TM proteins of enveloped viruses and may,additionally correspond to peptide sequences present in non envelopedand non-viral organisms. Such peptides may exhibit antifusogenicactivity, antiviral activity, most particularly antiviral activity whichis specific to the virus in which their native sequences are found, ormay exhibit an ability to modulate intracellular processes involvingcoiled-coil peptide structures.

DP178 analogs are peptides whose amino acid sequences are comprised ofthe amino acid sequences of peptide regions of, for example, other(i.e., other than HIV-1_(LAI)) viruses that correspond to the gp41peptide region from which DP178 (SEQ ID:1) was derived. Such viruses mayinclude, but are not limited to, other HIV-1 isolates and HIV-2isolates. DP178 analogs derived from the corresponding gp41 peptideregion of other (i.e., non HIV-1_(LAI)) HIV-1 isolates may include, forexample, peptide sequences as shown below.

-   NH₂-YTNTIYTLLEESQNQQEKNEQELLELDKWASLWNWF-COOH (DP-185; SEQ ID:3);-   NH₂-YTGIIYNLLEESQNQQEKNEQELLELDKWANLWNWF-COOH (SEQ ID:4);-   NH₂-YTSLIYSLLEKSQIQQEKNEQELLELDKWASLWNWF-COOH (SEQ ID:5).    SEQ ID:3 (DP-185), SEQ ID:4, and SEQ ID:5 are derived from    HIV-1_(SF2), HIV-1_(RF), and HIV-1_(MN) isolates, respectively.    Underlined amino acid residues refer to those residues that differ    from the corresponding position in the DP178 (SEQ ID:1) peptide. One    such DP178 analog, DP-185 (SEQ ID:3), is described in the Example    presented in Section 6, below, where it is demonstrated that DP-185    (SEQ ID:3) exhibits antiviral activity. The DP178 analogs of the    invention may also include truncations, as described above. Further,    the analogs of the invention modifications such those described for    DP178 analogs in Section 5.1., above. It is preferred that the DP178    analogs of the invention represent peptides whose amino acid    sequences correspond to the DP178 region of the gp41protein, it is    also contemplated that the peptides of the invention may,    additionally, include amino sequences, ranging from about 2 to about    50 amino acid residues in length, corresponding to gp41 protein    regions either amino to or carboxy to the actual DP178 amino acid    sequence.

Striking similarities, as shown in FIG. 1, exist within the regions ofHIV-1 and HIV-2 isolates which correspond to the DP178 sequence. A DP178analog derived from the HIV-2_(NIHZ) isolate has the 36 amino acidsequence (reading from amino to carboxy terminus):

-   NH₂-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-COOH (SEQ ID:7)    Table III and Table IV show some possible truncations of the    HIV-2_(NIHZ) DP178 analog, which may comprise peptides of between 3    and 36 amino acid residues (i.e., peptides ranging in size from a    tripeptide to a 36-mer polypeptide). Peptide sequences in these    tables are listed from amino (left) to carboxy (right) terminus. “X”    may represent an amino group (—NH₂) and “Z” may represent a carboxyl    (—COOH) group. Alternatively, “X” may represent a hydrophobic group,    including but not limited to carbobenzyl, dansyl, or    T-butoxycarbonyl; an acetyl group; a 9-fluorenylmethoxy-carbonyl    (FMOC) group; or a covalently attached macromolecular group,    including but not limited to a lipid-fatty acid conjugate,    polyethylene glycol, carbohydrate or peptide group. Further, “Z” may    represent an amido group; a T-butoxycarbonyl group; or a covalently    attached macromolecular group, including but not limited to a    lipid-fatty acid conjugate, polyethylene glycol, carbohydrate or    peptide group. A preferred “X” or “Z” macromolecular group is a    peptide group.

TABLE III HIV-2_(NIHZ) DP178 analog carboxy truncations. X-LEA-ZX-LEAN-Z X-LEANI-Z X-LEANIS-Z X-LEANISQ-Z X-LEANISQS-Z X-LEANISQSL-ZX-LEANISQSLE-Z X-LEANISQSLEQ-Z X-LEANISQSLEQA-Z X-LEANISQSLEQAQ-ZX-LEANISQSLEQAQI-Z X-LEANISQSLEQAQIQ-Z X-LEANISQSLEQAQIQQ-ZX-LEANISQSLEQAQIQQE-Z X-LEANISQSLEQAQIQQEK-Z X-LEANISQSLEQAQIQQEKN-ZX-LEANISQSLEQAQIQQEKNM-Z X-LEANISQSLEQAQIQQEKNMY-ZX-LEANISQSLEQAQIQQEKNMYE-Z X-LEANISQSLEQAQIQQEKNMYEL-ZX-LEANISQSLEQAQIQQEKNMYELQ-Z X-LEANISQSLEQAQIQQEKNMYELQK-ZX-LEANISQSLEQAQIQQEKNMYELQKL-Z X-LEANISQSLEQAQIQQEKNMYELQKLN-ZX-LEANISQSLEQAQIQQEKNMYELQKLNS-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSW-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWD-Z X-LEANISQSLEQAQIQQEKNMYELQKLNSWDV-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVF-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFT-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTN-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNW-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.

“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE IV HIV-2_(NIHZ) DP178 analog amino truncations. X-NWL-Z X-TNWL-ZX-FTNWL-Z X-VFTNWL-Z X-DVFTNWL-Z X-WDVFTNWL-Z X-SWDVFTNWL-ZX-NSWDVFTNWL-Z X-LNSWDVFTNWL-Z X-KLNSWDVFTNWL-Z X-QKLNSWDVFTNWL-ZX-LQKLNSWDVFTNWL-Z X-ELQKLNSWDVFTNWL-Z X-YELQKLNSWDVFTNWL-ZX-MYELQKLNSWDVFTNWL-Z X-NMYELQKLNSWDVFTNWL-Z X-KNMYELQKLNSWDVFTNWL-ZX-EKNMYELQKLNSWDVFTNWL-Z X-QEKNMYELQKLNSWDVFTNWL-ZX-QQEKNMYELQKLNSWDVFTNWL-Z X-IQQEKNMYELQKLNSWDVFTNWL-ZX-QIQQEKNMYELQKLNSWDVFTNWL-Z X-AQIQQEKNMYELQKLNSWDVFTNWL-ZX-QAQIQQEKNMYELQKLNSWDVFTNWL-Z X-EQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-LEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-QSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z X-SQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-ISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-NISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-ANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-EANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-ZX-LEANISQSLEQAQIQQEKNMYELQKLNSWDVFTNWL-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

DP178 and DP107 analogs are recognized or identified, for example, byutilizing one or more of the 107x178x4, ALLMOTI5 or PLZIPcomputer-assisted search strategies described and demonstrated, below,in the Examples presented in Sections 9 through 16 and 19 through 25.The search strategy identifies additional peptide regions which arepredicted to have structural and/or amino acid sequence features similarto those of DP107 and/or DP178.

The search strategies are described fully, below, in the Examplepresented in Section 9. While this search strategy is based, in part, ona primary amino acid motif deduced from DP107 and DP178, it is not basedsolely on searching for primary amino acid sequence homologies, as suchprotein sequence homologies exist within, but not between major groupsof viruses. For example, primary amino acid sequence homology is highwithin the TM protein of different strains of HIV-1 or within the TMprotein of different isolates of simian immunodeficiency virus (SIV).Primary amino acid sequence homology between HIV-1 and SIV, however, islow enough so as not to be useful. It is not possible, therefore, tofind peptide regions similar to DP107 or DP178 within other viruses, orwithin non-viral organisms, whether structurally, or otherwise, based onprimary sequence homology, alone.

Further, while it would be potentially useful to identify primarysequence arrangements of amino acids based on, for example, the physicalchemical characteristics of different classes of amino acids rather thanbased on the specific amino acids themselves, such search strategieshave, until now, proven inadequate. For example, a computer algorithmdesigned by Lupas et al. to identify coiled-coil propensities of regionswithin proteins (Lupas, A., et al., 1991 Science 252:1162-1164) isinadequate for identifying protein regions analogous to DP107 or DP178.

Specifically, analysis of HIV-1 gp160 (containing both gp120 and gp41)using the Lupas algorithm does not identify the coiled-coil regionwithin DP107. It does, however, identify a region within DP178 beginningeight amino acids N-terminal to the start of DP178 and ending eightamino acids from the C-terminus. The DP107 peptide has been shownexperimentally to form a stable coiled coil. A search based on the Lupassearch algorithm, therefore, would not have identified the DP107coiled-coil region. Conversely, the Lupas algorithm identified the DP178region as a potential coiled-coil motif. However, the peptide derivedfrom the DP178 region failed to form a coiled coil in solution.

A possible explanation for the inability of the Lupas search algorithmto accurately identify coiled-coil sequences within the HIV-1 TM, isthat the Lupas algorithm is based on the structure of coiled coils fromproteins that are not structurally or functionally similar to the TMproteins of viruses, antiviral peptides (e.g. DP107 and DP178) of whichare an object of this invention.

The computer search strategy of the invention, as demonstrated in theExamples presented below, in Sections 9 through 16 and 19 through 25,successfully identifies regions of proteins similar to DP107 or DP178.This search strategy was designed to be used with acommercially-available sequence database package, preferably PC/Gene.

A series of search motifs, the 107x178x4, ALLMOTI5 and PLZIP motifs,were designed and engineered to range in stringency from strict tobroad, as discussed in this Section and in Section 9, with 107x178x4being preferred. The sequences identified via such search motifs, suchas those listed in Tables V-XIV, below, potentially exhibitantifusogenic, such as antiviral, activity, may additionally be usefulin the identification of antifusogenic, such as antiviral, compounds,and are intended to be within the scope of the invention.

Coiled-coiled sequences are thought to consist of heptad amino acidrepeats. For ease of description, the amino acid positions within theheptad repeats are sometimes referred to as A through G, with the firstposition being A, the second B, etc. The motifs used to identifyDP107-like and DP178-like sequences herein are designed to specificallysearch for and identify such heptad repeats. In the descriptions of eachof the motifs described, below, amino acids enclosed by brackets , i.e.,[ ], designate the only amino acid residues that are acceptable at thegiven position, while amino acids enclosed by braces, i.e., { },designate the only amino acids which are unacceptable at the givenheptad position. When a set of bracketed or braced amino acids isfollowed by a number in parentheses i.e., ( ), it refers to the numberof subsequent amino acid positions for which the designated set of aminoacids hold, e.g, a (2) means “for the next two heptad amino acidpositions”.

The ALLMOTI5 is written as follows:

-   {CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)--   {CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)--   {CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)--   {CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)--   {CDGHP}-{CFP}(2)-{CDGHP}-{CFP}(3)-

Translating this motif, it would read: “at the first (A) position of theheptad, any amino acid residue except C, D, G, H, or P is acceptable, atthe next two (B, C) amino acid positions, any amino acid residue exceptC, F, or P is acceptable, at the fourth heptad position (D), any aminoacid residue except C, D, G, H, or P is acceptable, at the next three(E, F, G) amino acid positions, any amino acid residue except C, F, or Pis acceptable. This motif is designed to search for five consecutiveheptad repeats (thus the repeat of the first line five times), meaningthat it searches for 35-mer sized peptides. It may also be designed tosearch for 28-mers, by only repeating the initial motif four times. Withrespect to the ALLMOTI5 motif, a 35-mer search is preferred. Those viral(non-bacteriophage) sequences identified via such an ALLMOTI5 motif arelisted in Table V, below, at the end of this Section. The viralsequences listed in Table V potentially exhibit antiviral activity, maybe useful in the the identification of antiviral compounds, and areintended to be within the scope of the invention. In those instanceswherein a single gene exhibits greater than one sequence recognized bythe ALLMOTI5 search motif, the amino a acid residue numbers of thesesequences are listed under “Area 2”, Area 3”, etc. This convention isused for each of the Tables listed, below, at the end of this Section.

The 107x178x4 motif is written as follows:

-   [EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)--   [EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)--   [EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)--   [EFIKLNQSTVWY]-{CFMP}(2)-[EFIKLNQSTVWY]-{CFMP}(3)-

Translating this motif, it would read: “at the first (A) position of theheptad, only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y isacceptable, at the next two (B,C) amino acid positions, any amino acidresidue except C, F, M or P is acceptable, at the fourth position (D),only amino acid residue E, F, I, K, L, N, Q, S, T, V, W, or Y isacceptable, at the next three (E, F, G) amino acid positions, any aminoacid residue except C, F, M or P is acceptable. This motif is designedto search for four consecutive heptad repeats (thus the repeat of thefirst line four times), meaning that it searches for 28-mer sizedpeptides. It may also be designed to search for 35-mers, by repeatingthe initial motif five times. With respect to the 107x178x4 motif, a28-mer search is preferred.

Those viral (non-bacteriophage) sequences identified via such a107x178x4 motif are listed in Table VI, below, at the end of thisSection, with those viral (non-bacteriophage) sequences listed in TableVII, below at the end of this Section, being preferred.

The 107x178x4 search motif was also utilized to identify non-viralprocaryotic protein sequences, as listed in Table VIII, below, at theend of this Section. Further, this search motif was used to reveal anumber of human proteins. The results of this human protein 107x178x4search is listed in Table IX, below, at the end of this Section. Thesequences listed in Tables VIII and IX, therefore, reveal peptides whichmay be useful as antifusogenic compounds or in the identification ofantifusogenic compounds, and are intended to be within the scope of theinvention.

The PLZIP series of motifs are as listed in FIG. 19. These motifs aredesigned to identify leucine zipper coiled-coil like heptads wherein atleast one proline residue is present at some predefined distanceN-terminal to the repeat. These PLZIP motifs find regions of proteinswith similarities to HIV-1 DP178 generally located just N-terminal tothe transmembrane anchor. These motifs may be translated according tothe same convention described above. Each line depicted in FIG. 19represents a single, complete search motif. “X” in these motifs refersto any amino acid residue. In instances wherein a motif contains twonumbers within parentheses, this refers to a variable number of aminoacid residues. For example, X (1, 12) is translated to “the next one totwelve amino acid residues, inclusive, may be any amino acid”.

Tables X through XIV, below, at the end of this Section, list sequencesidentified via searches conducted with such PLZIP motifs. Specifically,Table X lists viral sequences identified via PCTLZIP, PLCTLZIP andP2CTLZIP search motifs, Table XI lists viral sequences identified viaP3CTLZIP, P4CTLZIP, P5CTLZIP and P6CTLZIP search motifs, Table XII lstsviral sequences identified via P7CTLZIP, P8CTLZIP and P9CTLZIP searchmotifs, Table XIII lists viral sequences identified via P12LZIPCsearches and Table XIV lists viral sequences identified via P23TLZIPCsearch motifs The viral sequences listed in these tables representpeptides which potentially exhibit antiviral activity, may be useful inthe identification of antiviral compounds, and are intended to be withinthe scope of the invention.

The Examples presented in Sections 17, 18, 26 and 27 below, demonstratethat viral sequences identified via the motif searches described hereinidentify substantial antiviral characteristics. Specifically, theExample presented in Section 17 describes peptides with anti-respiratorysyncytial virus activity, the Example presented in Section 18 describespeptides with anti-parainfluenza virus activity, the Example presentedin Section 26 describes peptides with anti-measles virus activity andthe Example presented in Section 27 describes peptides with anti-simianimmunodeficiency virus activity.

The DP107 and DP178 analogs may, further, contain any of the additionalgroups described for DP178, above, in Section 5.1. For example, thesepeptides may include any of the additional amino-terminal groups asdescribed above for “X” groups, and may also include any of thecarboxy-terminal groups as described, above, for “Z” groups.

Additionally, truncations of the identified DP107 and DP178 peptides areamong the peptides of the invention. Further, such DP107 and DP178analogs and DP107/DP178 analog truncations may exhibit one or more aminoacid substitutions, insertion, and/or deletions. The DP178 analog aminoacid substitutions, insertions and deletions, are as described, above,for DP178-like peptides in Section 5.1. The DP-107 analog amino acidsubstitutions, insertions and deletions are also as described, above,for DP107-like peptides in Section 5.2.

Tables XV through XXII, below, present representative examples of suchDP107/DP178 truncations. Specifically, Table XV presents RespiratorySyncytial Virus F1 region DP107 analog carboxy truncations, Table XVIpresents Respiratory Syncytial Virus F1 region DP107 analog aminotruncations, Table XVII presents Respiratory Syncytial Virus F1 regionDP178 analog carboxy truncations, Table XVIII presents RespiratorySyncytial Virus F1region DP178 analog amino truncations, Table XIXpresents Human Parainfluenza Virus 3 F1 region DP178 analog carboxytruncations, Table XX presents Human Parainfluenza Virus 3 F1 regionDP178 analog amino truncations, Table XXI presents Human ParainfluenzaVirus 3 F1 region DP107 analog carboxy truncations and Table XXIIpresents Human Parainfluenza Virus 3 F1region DP107 analog aminotruncations. Further, Table XXIII, below, presents DP107/DP178 analogsand analog truncations which exhibit substantial antiviral activity.These antiviral peptides are grouped according to the specific viruswhich they inhibit, including respiratory syncytial virus, humanparainfluenza virus 3, simian immunodeficiency virus and measles virus.

TABLE V ALLMOTI5 SEARCH RESULTS SUMMARY FOR ALL VIRAL(NON-BACTERIOPHAGE) PROTEINS PCGENE ALLMOTI5 All Viruses (nobacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA5 AREA 6 AREA 7 AREA 8 P170K_TRVPS POTENTIAL 170 KD PROTEIN TOBACCORATTLE VIRUS (STRAIN PSG) 113-153 P194K_TRVSY POTENTIAL 194 KD PROTEINTOBACCO RATTLE VIRUS (STRAIN SYM 144-178 214-248 391-446 644-678 1045-1135- 1335- 1618- 1079 1176 1376 1656 P55KD_HSV6U 55 8 KD PROTEIN HERPESSIMPLEX VIRUS 228-262 (TYPE 6/STRAIN UGANDA-1102) PAANT_HDVAM DELTAANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN)  3-48 100-144PAANT_HDVD3 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE D380)  7-48100-144 PAANT_HDVTT DELTA ANTIGEN (ALPHA ANTIGEN) HEPATITIS DELTA VIRUS(ISOLATE ITALIAN)  3-48 100-144 PAANT_HDVL1 DELTA ANTIGEN HEPATITISDELTA VIRUS (ISOLATE LEBANON-1)  3-48 PAANT_HDVM1 DELTA ANTIGENHEPATITIS DELTA VIRUS  3-48 100-144 (ISOLATE JAPANESE M-1) PAANT_HDVM2DELTA ANTIGEN HEPATITIS DELTA VIRUS  3-48 100-144 (ISOLATE JAPANESE M-2)PAANT_HDVNA DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE NAURU)  3-48100-144 PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS  1-49 100-144(ISOLATE JAPANESE S-1) PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 1-49 100-144 (ISOLATE JAPANESE S-2) PAANT_HDVWO DELTA ANTIGEN HEPATITISDELTA VIRUS  3-48 100-144 (ISOLATE WOODCHUCK) PAT3H_FOWPMANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438)  71-110PAT11_VACCV 94 KD A-TYPE INCLUSION PROTEIN VACCINIA VIRUS (STRAIN WR)14-57 420-564 570-625 PAT11_VARV 81 KD A-TYPE INCLUSION PROTEIN VARIOLAVIRUS 425-525 531-565 571-628 PAT12_HSV11 ALPHA TRANS-INDUCING FACTORHERPES SIMPLEX VIRUS (TYPE 1) 304-345 PAT12_HSV1F ALPHA TRANS-INDUCINGFACTOR HERPES SIMPLEX VIRUS (TYPE 1) 102-139 304-345 PAT12_HSVEB ALPHATRANS-INDUCING FACTOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 101-147268-331 PAT12_VACCC PUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN)  79-124 219-263 PAT12_VACCV PUTATIVE A-TYPEINCLUSION PROTEIN VACCINIA VIRUS  79-124 PAT12_VZVD ALPHA TRANS-INDUCINGFACTOR VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 298-361 395-429 PAT13_VACCVPUTATIVE A-TYPE INCLUSION PROTEIN VACCINIA VIRUS 51-95 PATIN_HSV23 ALPHATRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEX VIRUS (TYPE 2) 178-219324-381 PATIN_HSV2H ALPHA TRANS-INDUCING PROTEIN (VMW65) HERPES SIMPLEXVIRUS (TYPE 2) 177-222 324-381 PATIN_HSVBP ALPHA TRANS-INDUCING PROTEINBOVINE HERPESVIRUS TYPE 1 195-256 PATIN_HSVEB ALPHA TRANS-INDUCINGPROTEIN EQUINE HERPESVIRUS TYPE 1 241-289 PATIN_VZVD ALPHATRANS-INDUCING PROTEIN ( VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 206-252PATI_COWPX A-TYPE INCLUSION PROTEIN COWPOX VIRUS 14-57 426-526 532-566572-629 803-989 1106- 1150 PBDL2_EBV PROTEIN BDLF2 EPSTEIN-BARR VIRUS(STRAIN B95-8)  90-131 PBRL1_EBV TRANSCRIPTION ACTIVATOR BRLF1EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-187 PCOA1_POVBA COAT PROTEIN VP1POLYOMAVIRUS BK 107-141 PCOA1_POVBK COAT PROTEIN VP1 POLYOMAVIRUS BK107-141 PCOA1_POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-195PCOA1_SV40 COAT PROTEIN VP1 SIMIAN VIRUS 40 109-143 PCOA2_BFDV COATPROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 141-213 PCOA2_POVBA COATPROTEIN VP2 POLYOMAVIRUS BK (STRAIN AS) 14-64 317-351 PCOA2_POVBK COATPROTEIN VP2 POLYOMAVIRUS BK 14-64 317-351 PCOA2_POVBO COAT PROTEIN VP2BOVINE POLYOMAVIRUS 35-76 153-216 PCOA2_POVHA COAT PROTEIN VP2 HAMSTERPOLYOMAVIRUS  7-48 174-208 PCOA2_POVIC COAT PROTEIN VP2 POLYOMAVIRUS JC14-64 233-267 PCOA2_POVLY COAT PROTEIN VP2 LYMPHOTROPIC POLYOMAVIRUS14-78 156-206 PCOA2_POVM3 COAT PROTEIN VP2 MOUSE POLYOMAVIRUS (STRAIN 3) 5-72 137-185 PCOA2_POVMA COAT PROTEIN VP2 MOUSE POLYOMAVIRUS  5-72137-185 PCOA2_POVMC COAT PROTEIN VP2 MOUSE POLYOMAVIRUS  5-72 137-185PCOA2_POVMK COAT PROTEIN VP2 MOUSE POLYOMAVIRUS 15-56 177-211 PCOA2_SV40COAT PROTEIN VP2 SIMIAN VIRUS 40 14-62 228-262 318-352 PCOAT_ABMVW COATPROTEIN ABUTILON MOSAIC VIRUS 180-214 (ISOLATE WEST INDIA PCOAT_ACLSVCOAT PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS 154-188 PCOAT_AEDEV COATPROTEIN VP1 AEDES DENSONUCLEOSIS VIRUS 243-284 PCOAT_AMCV COAT PROTEINARTICHOKE MOTTLED CRINKLE VIRUS 36-70 100-134 PCOAT_BLRV COAT PROTEINBEAN LEAFROLL VIRUS  89-123 PCOAT_BMV COAT PROTEIN BROME MOSAIC VIRUS36-73 PCOAT_BYDV1 COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197PCOAT_BYDVM COAT PROTEIN BARLEY YELLOW DWARF VIRUS 163-197 PCOAT_BYDVPCOAT PROTEIN BARLEY YELLOW DWARF VIRUS 164-198 PCOAT_BYDVR COAT PROTEINBARLEY YELLOW DWARF VIRUS 164-198 PCOAT_CAMVC COAT PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN 56-90 186-223 PCOAT_CAMVD COAT PROTEIN CAULIFLOWERMOSAIC VIRUS 53-91 187-224 PCOAT_CAMVE COAT PROTEIN CAULIFLOWER MOSAICVIRUS 56-90 186-223 PCOAT_CAMVN COAT PROTEIN CAULIFLOWER MOSAIC VIRUS56-90 185-222 PCOAT_CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS 53-91187-224 PCOAT_CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 13-51 PCOAT_CCMVCOAT PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 141-178 PCOAT_CERV PROBABLECOAT PROTEIN CARNATION ETCHED RING VIRUS 192-226 PCOAT_CHVP1 MAJORCAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 1 393-435 PCOAT_CLVKCOAT PROTEIN CASSAVA LATENT VIRUS 197-231 PCOAT_CLVN COAT PROTEINCASSAVA LATENT VIRUS 197-231 PCOAT_CMVFC COAT PROTEIN CUCUMBER MOSAICVIRUS 153-187 PCOAT_CMVI COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187PCOAT_CMVP6 COAT PROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVQ COATPROTEIN CUCUMBER MOSAIC VIRUS 153-187 PCOAT_CMVWL COAT PROTEIN CUCUMBERMOSAIC VIRUS 153-187 PCOAT_CMVY COAT PROTEIN CUCUMBER MOSAIC VIRUS153-187 PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-365PCOAT_CSMV COAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 184-218 PCOAT_CTV36COAT PROTEIN CITRUS TRISTEZA VIRUS  79-120 PCOAT_CYMV COAT PROTEINCLOVER YELLOW MOSAIC VIRUS 162-204 PCOAT_EPMV COAT PROTEIN EGGPLANTMOSAIC VIRUS 40-74 PCOAT_FCVC6 COAT PROTEIN FELINE CALICIVIRUS 432-466566-600 PCOAT_FCVF4 COAT PROTEIN FELINE CALICIVIRUS 502-550 566-600PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS 519-553 569-603 PCOAT_FMVDPROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS 144-199 206-247 449-483PCOAT_FXMV COAT PROTEIN FOXTAIL MOSAIC VIRUS 168-220 PCOAT_IRV1 CAPSIDPROTEIN TIPULA IRIDESCENT VIRUS  90-124 PCOAT_IRV22 CAPSID PROTEINSIMULIUM IRIDESCENT VIRUS  90-124 PCOAT_IRV6 CAPSID PROTEIN CHILOIRIDESCENT VIRUS 51-85 PCOAT_LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS32-70 255-289 PCOAT_MSTV COAT PROTEIN MAIZE STRIPE VIRUS  7-76  84-121PCOAT_MSVK COAT PROTEIN MAIZE STREAK VIRUS 187-221 PCOAT_MSVN COATPROTEIN MAIZE STREAK VIRUS 187-221 PCOAT_MSVS COAT PROTEIN MAIZE STREAKVIRUS 187-221 PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS105-139 PCOAT_PAVBO COAT PROTEIN VP2 BOVINE PARVOVIRUS 380-414 444-480PCOAT_PAVC7 COAT PROTEIN VP1 CANINE PARVOVIRUS 497-531 PCOAT_PEBV COATPROTEIN PEA EARLY BROWNING VIRUS  73-114 PCOAT_POPMV COAT PROTEIN POPLARMOSAIC VIRUS 36-81 PCOAT_PPMVS COAT PROTEIN PEPPER MILD MOTTLE VIRUS104-138 PCOAT_PVSP COAT PROTEIN POTATO VIRUS 38-72 251-292 PCOAT_PYMVVCOAT PROTEIN POTATO YELLOW MOSAIC VIRUS 190-224 PCOAT_RBDV COAT PROTEINRASPBERRY BUSHY DWARF VIRUS 10-44 140-199 PCOAT_RCNMV COAT PROTEIN REDCLOVER NECROTIC MOSAIC VIRUS 272-306 PCOAT_RSV COAT PROTEIN RICE STRIPEVIRUS 34-68  83-120 259-309 PCOAT_SLCV COAT PROTEIN SQUASH LEAF CURLVIRUS 190-224 PCOAT_SMWLM COAT PROTEIN SATELLITE MAIZE WHITE LINE MOSAICVIRUS  66-100 PCOAT_SOCMV COAT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS128-166 PCOAT_STNV1 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 1 2-50 PCOAT_STNV2 COAT PROTEIN SATELLITE TOBACCO NECROSIS VIRUS 2 38-72PCOAT_TAMV GENOME POLYPROTEIN TAMARILLO MOSAIC VIRUS  7-55 PCOAT_TAVCOAT PROTEIN TOMATO ASPERMY VIRUS 14-48 PCOAT_TBSVB COAT PROTEIN TOMATOBUSHY STUNT VIRUS  1-37 43-77 PCOAT_TBSVC COAT PROTEIN TOMATO BUSHYSTUNT VIRUS 44-78 100-134 PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS12-46 PCOAT_TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 186-220PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 103-137PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMV06 COATPROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVCO COAT PROTEIN TOBACCOMOSAIC VIRUS  76-138 PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS103-137 PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVO COATPROTEIN TOBACCO MOSAIC VIRUS 103-137 PCOAT_TMVOM COAT PROTEIN TOBACCOMOSAIC VIRUS 103-137 PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS103-137 PCOAT_TRVCA COAT PROTEIN TOBACCO RATTLE VIRUS  71-109PCOAT_TRVTC COAT PROTEIN TOBACCO RATTLE VIRUS  69-103 PCOAT_TYDVA COATPROTEIN TOBACCO YELLOW DWARF VIRUS  2-36 PCOAT_TYMV COAT PROTEIN TURNIPYELLOW MOSAIC VIRUS 41-75 PCOAT_TYMVA COAT PROTEIN TURNIP YELLOW MOSAICVIRUS 41-75 PCOAT_WCMVO COAT PROTEIN WHITE CLOVER MOSAIC VIRUS 163-197PCORA_HPBGS CORE ANTIGEN GROUND SQUIRREL HEPATITIS VIRUS  94-135PCORA_HPBV9 CORE ANTIGEN HEPATITIS B VIRUS 111-149 PCORA_WHV1 COREANTIGEN WOODCHUCK HEPATITIS VIRUS 1  62-106 PCORA_WHV8 CORE ANTIGENWOODCHUCK HEPATITIS VIRUS 8  62-106 PD250_ASFB7 PROTEIN D250R AFRICANSWINE FEVER VIRUS 198-232 PDNB2_ADE02 EARLY E2A DNA-BINDING PROTEINHUMAN ADENOVIRUS TYPE 2 291-336 PDNB2_ADE05 EARLY E2A DNA-BINDINGPROTEIN HUMAN ADENOVIRUS TYPE 5 291-336 PDNB1_EBV MAJOR DNA-BINDINGPROTEIN EPSTEIN-BARR VIRUS 251-252 718-752  974- 1027- 1009 1068PDNB1_HCMVA MAJOR DNA-BINDING PROTEIN HUMAN CYTOMEGALOVIRUS 338-3721013- 1070 PDNB1_HSV11 MAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS557-595 599-640 769-803 1079- 1140 PDNB1_HSV1F MAJOR DNA-BINDING PROTEINHERPES SIMPLEX VIRUS 557-595 599-640 769-803 1079- 1140 PDNB1_HSV1KMAJOR DNA-BINDING PROTEIN HERPES SIMPLEX VIRUS 557-595 599-640 769-8031079- 1140 PDNB1_HSVB2 MAJOR DNA-BINDING PROTEIN BOVINE HERPESVIRUS TYPE2 552-591 599-633 1048- 1131 PDNB1_HSVE1 MAJOR DNA-BINDING PROTEINEQUINE HERPESVIRUS TYPE 1 273-314 PDNB1_HSVEB MAJOR DNA-BINDING PROTEINEQUINE HERPESVIRUS TYPE 1 617-658 1107- 1148 PDNB1_HSVSA MAJORDNA-BINDING PROTEIN HERPESVIRUS SAIMIRI 222-259 330-367 506-557 873-907PDNB1_MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS 584-618 987- 1125 PDNB1_SCMVC MAJOR DNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS525-562 PDNB1_VZVD MAJOR DNA-BINDING PROTEIN VARICELLA-ZOSTER VIRUS613-650 1043- 1077 PDNL1_ASFM2 DNA LIGASE AFRICAN SWINE FEVER VIRUS 72-106 PDNL1_VACCC DNA LIGASE VACCINIA VIRUS 395-436 PDNL1_VACCV DNALIGASE VACCINIA VIRUS 395-436 PDNL1_VARV DNA LIGASE VARIOLA VIRUS395-436 PDPOL_ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 667-743PDPOL_ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 667-743 PDPOL_ADE07DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 733-809 PDPOL_ADE12 DNAPOLYMERASE HUMAN ADENOVIRUS TYPE 12 665-741 PDPOL_CBEPV DNA POLYMERASECHORISTONEURA BIENNIS ENTOMOPOXVIRUS 23-64 202-240 PDPOL_CHVN2 DNAPOLYMERASE CHLORELLA VIRUS NY-2A 247-284 PDPOL_CHVP1 DNA POLYMERASEPARAMECIUM BURSARIA CHLORELLA VIRUS 1 247-284 PDPOL_FOWPV DNA POLYMERASEFOWLPOX VIRUS 17-51  80-114 371-412 PDPOL_HCMVA DNA POLYMERASE HUMANCYTOMEGALOVIRUS (STRAIN AD169) 753-787 1033- 1074 PDPOL_HPBDB DNAPOLYMERASE DUCK HEPATITIS B VIRUS  5-39 PDPOL_HPBDC DNA POLYMERASE DUCKHEPATITIS B VIRUS (STRAIN CHINA)  5-39 PDPOL_HPBDW DNA POLYMERASE DUCKHEPATITIS B VIRUS  5-39 297-338 (WHITE SHANGHAI DUCK ISOLATE S3PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 291-325PDPOL_HPBHE DNA POLYMERASE HERON HEPATITIS B VIRUS  5-39 224-265 557-595PDPOL_HPBVY DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE AYW) 201-235PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 201-235PDPOL_HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)511-559 PDPOL_HSV1A DNA POLYMERASE HERPES SIMPLEX VIRUS 511-559 (TYPE1/STRAIN ANGELOTTI PDPOL_HSV1K DNA POLYMERASE HERPES SIMPLEX VIRUS (TYPE1/STRAIN KOS) 511-559 PDPOL_HSV1S DNA POLYMERASE HERPES SIMPLEX VIRUS(TYPE 1/STRAIN SC16) 511-559 PDPOL_HSV21 DNA POLYMERASE HERPES SIMPLEXVIRUS (TYPE 2/STRAIN 186) 512-560 PDPOL_HSVEB DNA POLYMERASE EQUINEHERPESVIRUS TYPE 1 (STRAIN AB4P) 494-528 PDPOL_HSV11 DNA POLYMERASEICTALURID HERPESVIRUS 1 33-67 328-366 401-435 706-749 808-858 (CHANNELCATFISH VIRUS) PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHA CALIFORNICA NUCLEAR595-646 POLYHEDROSIS VIRUS PDPOL_VACCC DNA POLYMERASE VACCINIA VIRUS(STRAIN COPENHAGEN) 627-683 770-818 828-862 PDPOL_VACCV DNA POLYMERASEVACCINIA VIRUS (STRAIN WR) 627-683 770-818 828-862 PDPOL_VARV DNAPOLYMERASE VARIOLA VIRUS 626-682 769-817 827-861 PDPOL_VZVD DNAPOLYMERASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 473-533 PDPOL_WHV1 DNAPOLYMERASE WOODCHUCK HEPATITIS VIRUS 1 285-326 PDPOL_WHV59 DNAPOLYMERASE WOODCHUCK HEPATITIS VIRUS 59 290-331 PDPOL_WHV7 DNAPOLYMERASE WOODCHUCK HEPATITIS VIRUS 7 290-331 PDPOL_WHV8 DNA POLYMERASEWOODCHUCK HEPATITIS VIRUS 8 289-330 PDPOL_WHV81 DNA POLYMERASE WOODCHUCKHEPATITIS VIRUS 8 290-331 (INFECTIOUS CLONE) PDPOM_HPBVY DNA POLYMERASEHEPATITIS B VIRUS (SUBTYPE AYW) 201-235 PDUT_HSVEB DEOXYURIDINE5′-TRIPHOSPHATE EQUINE HERPES VIRUS TYPE 1 (STRAIN AB4P 135-169NUCLEOTIDOHY PDUT_HSVSA DEOXYURIDINE 5′-TRIPHOSPHATE HERPESVIRUS SAIMIRI(STRAIN 11) 179-223 NUCLEOTIDOHY PE1A_ADE41 EARLY E1A 27 KD PROTEINHUMAN ADENOVIRUS TYPE 41 107-141 PE1BL_ADE40 E1B PROTEIN, LARGET-ANTIGEN HUMAN ADENOVIRUS TYPE 40 102-166 PE1BS_ADE02 E1B PROTEIN,SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 2 103-137 PE1BS_ADE05 E1B PROTEIN,SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 5 103-137 PE1BS_ADE12 E1B PROTEIN,SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 12  96-131 PE1BS_ADE40 E1BPROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 40 100-134 PE1BS_ADE41E1B PROTEIN, SMALL T-ANTIGEN HUMAN ADENOVIRUS TYPE 41 100-134PE1BS_ADEM1 E1B PROTEIN, SMALL T-ANTIGEN MOUSE ADENOVIRUS TYPE 1 199-173PE314_ADE02 EARLY E3B 14 KD PROTEIN HUMAN ADENOVIRUS TYPE 2  2-39PE314_ADE03 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 3  8-49PE314_ADE05 EARLY E3 14.5 KD PROTEIN HUMAN ADENOVIRUS TYPE 5  2-39PE314_ADE07 EARLY E3 15.3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7  7-48PE320_ADE35 EARLY E3 20.3 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE 35 70-107 PE321_ADE35 EARLY E3 20.6 KD GLYCOPROTEIN HUMAN ADENOVIRUS TYPE35 125-169 PE411_ADE02 PROBABLE EARLY E4 11 KD PROTEIN HUMAN ADENOVIRUSTYPE 2 10-44 PE411_ADE05 PROBABLE EARLY E4 11 KD PROTEIN HUMANADENOVIRUS TYPE 5 10-44 PEAR_EBV EARLY ANTIGEN PROTEIN R EPSTEIN-BARRVIRUS (STRAIN B95-8) 123-157 PEBN4_EBV EBNA-4 NUCLEAR PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 487-521 PEFT1_VARV EARLY TRANSCRIPTIONFACTOR VARIOLA VIRUS 23-71 307-341 70 KD SUBUNIT PENV1_FRSFV ENVPOLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS 341-375PENV2_FRSFV ENV POLYPROTEIN PRECURSOR FRIEND SPLEEN FOCUS-FORMING VIRUS341-378 PENV_AVIRE ENV POLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS420-472 PENV_AVISN ENV POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 426-478PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 390-456PENV_BIV06 ENV POLYPROTEIN PRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44 88-122 221-255 530-610 635-691 (ISOLATE 106) PENV_BIV27 ENV POLYPROTEINPRECURSOR BOVINE IMMUNODEFICIENCY VIRUS 10-44  88-122 159-193 250-284559-639 664-724 (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIAVIRUS 304-379 (AMERICAN ISOLATE FLK) PENV_BLVAU ENV POLYPROTEIN BOVINELEUKEMIA VIRUS 304-379 (AUSTRALIAN ISOLATE) PENV_BLVAV ENV POLYPROTEINBOVINE LEUKEMIA VIRUS 304-379 (AMERICAN ISOLATE VDM) PENV_BLVB2 ENVPOLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (BELGIUM ISOLATE LB285)PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 BELGIUM ISOLATELB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-379 (JAPANESEISOLATE BLV-1) PENV_CAEVC ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITISENCEPHALITIS VIRUS 157-196 615-720 751-785 847-895 (STRAIN CORK)PENV_CAEVG ENV POLYPROTEIN PRECURSOR CAPRINE ARTHRITIS ENCEPHALITISVIRUS 154-193 613-718 749-783 845-893 (STRAIN G63) PENV_EIAV1 ENVPOLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525559-593 668-716 (CLONE P3.2-1) PENV_EIAV2 ENV POLYPROTEIN PRECURSOREQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-692 (CLONEP3.2-2) PENV_EIAV3 ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIAVIRUS 39-76 436-525 559-593 658-716 (CLONE P3.2-3) PENV_EIAV5 ENVPOLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 38-76 437-526560-594 659-693 (CLONE P3.2-5) PENV_EIAV9 ENV POLYPROTEIN PRECURSOREQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (CLONE1369) PENV_EIAVC ENV POLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIAVIRUS 39-76 436-525 559-593 658-716 (CLONE CL22) PENV_EIAVW ENVPOLYPROTEIN PRECURSOR EQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525559-593 658-716 (STRAIN WSU5) PENV_EIAVY ENV POLYPROTEIN PRECURSOREQUINE INFECTIOUS ANEMIA VIRUS 39-76 436-525 559-593 658-716 (ISOLATEWYOMING) PENV_FENV1 ENV POLYPROTEIN PRECURSOR FELINE ENDOGENOUS VIRUSECE1 503-555 567-604 PENV_FIVPE ENVELOPE POLYPROTEIN PRECURSOR FELINEIMMUNODEFICIENCY VIRUS 610-690 715-756 (ISOLATE PETALUMA) PENV_FIVSDENVELOPE POLYPROTEIN PRECURSOR FELINE IMMUNODEFICIENCY VIRUS 601-688713-754 (ISOLATE SAN DIEGO) PENV_FIVT2 ENVELOPE POLYPROTEIN PRECURSORFELINE IMMUNODEFICIENCY VIRUS  60-122 609-689 714-755 (ISOLATE TM2)PENV_FLVC6 ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA PROVIRUS (CLONECFE-6) 497-549 561-595 PENV_FLVGL ENV POLYPROTEIN PRECURSOR FELINELEUKEMIA VIRUS 478-530 542-576 (STRAIN A/GLASGOW-1) PENV_FLVLB ENVPOLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS 498-550 562-596 (STRAINLAMBDA-B1) PENV_FLVSA ENV POLYPROTEIN PRECURSOR FELINE LEUKEMIA VIRUS(STRAIN SARMA) 475-527 539-573 PENV_FOAMV ENV POLYPROTEIN HUMANSPUMARETROVIRUS  1-41 154-205 321-355 563-693 866-903 PENV_FSVGA ENVPOLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-550 562-596 (STRAINGARDNER-ARNSTEIN) PENV_FSVGB ENV POLYPROTEIN PRECURSOR FELINE SARCOMAVIRUS 478-530 542-576 (STRAIN GA) PENV_FSVSM ENV POLYPROTEIN PRECURSORFELINE SARCOMA VIRUS 481-524 545-579 (STRAIN SM) PENV_FSVST ENVPOLYPROTEIN PRECURSOR FELINE SARCOMA VIRUS 498-532 (STRAINSNYDER-THEILEN) PENV_GALV ENV POLYPROTEIN PRECURSOR GIBBON APE LEUKEMIAVIRUS 523-575 587-621 PENV_HTL1A ENV POLYPROTEIN HUMAN T-CELL LEUKEMIAVIRUS TYPE 1 321-383 (STRAIN ATK) PENV_HTL1C ENV POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS TYPE 1 316-383 (CARIBBEAN ISOLATE) PENV_HTL1M ENVPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 321-383 (ISOLATE MT-2)PENV_HTLV2 ENV POLYPROTEIN PRECURSOR HUMAN T-CELL LEUKEMIA VIRUS TYPE II317-377 PENV_HV1A2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 497-593 612-711 766-845 PRECURSOR (ARV2/SF2 ISOLATEPENV_HV1B1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 505-594 610-712 767-843 PRECURSOR (BH10 ISOLATE) PENV_HV1B8 ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-589 605-707762-838 PRECURSOR (BH8 ISOLATE) PENV_HV1BN ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365 501-590 609-708 763-831PRECURSOR (CONT (BRAIN ISOLATE) PENV_HV1BR ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 510-599 615-717 772-841 PRECURSOR(BRU ISOLATE) PENV_HV1C4 ENVELOPE POLYPROTEIN GP160 HUMANIMMUNODEFICIENCY VIRUS TYPE 1 342-376 510-606 626-724 779-855 PRECURSOR(CDC-451 ISOLATE) PENV_HV1EL ENVELOPE POLYPROTEIN GP160 HUMANIMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 607-709 768-829 PRECURSOR(ELI ISOLATE) PENV_HV1H2 ENVELOPE POLYPROTEIN GP160 HUMANIMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712 767-836 PRECURSOR (HXB2ISOLATE) PENV_HV1H3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 505-594 610-712 767-843 PRECURSOR (HXB3 ISOLATE) PENV_HV1J3ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-377517-605 622-723 778-843 PRECURSOR (JH3 ISOLATE) PENV_HV1JR ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 329-363 497-586603-704 759-835 PRECURSOR (JRCSF ISOLATE) PENV_HV1KB ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  88-122 338-372511-545 555-599 618-677 681-718 772-848 PRECURSOR (STRAIN KB-1-GP32)PENV_HV1MA ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 259-300 507-596 617-714 770-825 PRECURSOR (MAL ISOLATE) PENV_HV1MFENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 503-592622-710 765-841 PRECURSOR (MFA ISOLATE) PENV_HV1MN ENVELOPE POLYPROTEINGP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370 506-595 617-713774-841 PRECURSOR (MN ISOLATE) PENV_HV1N5 ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 326-360 PRECURSOR (NEW YORK-5 ISOLPENV_HV1ND ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 249-290 495-584 601-702 757-825 PRECURSOR (NDK ISOLATE) PENV_HV1OYENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-370497-593 610-711 766-842 PRECURSOR (OY1 ISOLATE) PENV_HV1PV ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 505-594 610-712767-843 PRECURSOR (PV22 ISOLATE) PENV_HV1RH ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 344-378 507-603 619-721 776-852PRECURSOR (RF/HAT ISOLATE) PENV_HV1S1 ENVELOPE POLYPROTEIN GP160 HUMANIMMUNODEFICIENCY VIRUS TYPE 1 496-585 602-703 758-830 PRECURSOR (SF162ISOLATE) PENV_HV1S3 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 332-366 494-590 607-708 763-837 PRECURSOR (SF33 ISOLATE)PENV_HV1SC ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 331-365 498-584 611-712 767-834 PRECURSOR (SC ISOLATE) PENV_HV1W1ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 331-365498-594 611-712 767-836 PRECURSOR (WMJ1 ISOLATE) PENV_HV1W2 ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 327-361 489-594602-703 758-827 PRECURSOR (WMJ2 ISOLATE) PENV_HV1Z2 ENVELOPE POLYPROTEINGP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 502-591 610-709764-831 PRECURSOR (Z2/CDC-Z34 ISOLAT PENV_HV1Z3 ENVELOPE POLYPROTEINGP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 251-292 PRECURSOR (ZAIRE 3ISOLATE) PENV_HV1Z6 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 256-297 504-593 609-711 766-840 PRECURSOR (ZAIRE 6 ISOLATE)PENV_HV1Z8 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 266-307 512-601 617-675 682-719 774-831 PRECURSOR (Z-84 ISOLATE)PENV_HV1ZH ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE1 522-594 612-671 675-712 777-839 PRECURSOR (ZAIRE HZ321 ISOLAPENV_HV2BE ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE2 447-481 510-595 617-680 PRECURSOR (ISOLATE BEN) PENV_HV2CA ENVELOPEPOLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 512-597 619-709PRECURSOR (ISOLATE CAM2) PENV_HV2D1 ENVELOPE POLYPROTEIN GP160 HUMANIMMUNODEFICIENCY VIRUS TYPE 2 501-586 608-698 PRECURSOR (ISOLATE D194)PENV_HV2G1 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE2 439-473 502-587 609-699 PRECURSOR (ISOLATE GHANA-1) PENV_HV2NZENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 488-587609-699 PRECURSOR (ISOLATE NIH-Z) PENV_HV2RO ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 511-596 618-708 PRECURSOR (ISOLATEROD) PENV_HV2S2 ENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 442-476 505-590 612-702 PRECURSOR (ISOLATE ST/24.1C# PENV_HV2SBENVELOPE POLYPROTEIN GP160 HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 526-588614-700 PRECURSOR (ISOLATE SBLISY) PENV_HV2ST ENVELOPE POLYPROTEIN GP160HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 442-476 505-590 612-702 PRECURSOR(ISOLATE ST) PENV_IPMAE ENV POLYPROTEIN PRECURSOR MOUSE INTRACISTERNALA-PARTICLE 367-422 465-527 PENV_JSRV ENV POLYPROTEIN PRECURSOR SHEEPPULMONARY ADENOMATOSIS VIRUS 403-455 571-605 PENV_MCFF ENV POLYPROTEINPRECURSOR MINK CELL FOCUS-FORMING MURINE 473-525 537-571 LEUKEMIA VIRUSPENV_MCFF3 ENV POLYPROTEIN PRECURSOR MINK CELL FOCUS-FORMING MURINE474-526 538-572 (COAT POLYPROTE LEUKEMIA VIRUS (ISOLA PENV_MLVAV ENVPOLYPROTEIN PRECURSOR AKV MURINE LEUKEMIA VIRUS 503-555 567-601PENV_MLVCB ENV POLYPROTEIN PRECURSOR CAS-BR-E MURINE LEUKEMIA VIRUS498-550 562-596 PENV_MLVF5 ENV POLYPROTEIN PRECURSOR FRIEND MURINELEUKEMIA VIRUS (ISOLATE 57) 520-564 576-610 PENV_MLVFF ENV POLYPROTEINPRECURSOR FRIEND MURINE LEUKEMIA VIRUS 520-564 576-610 (ISOLATE FB29)PENV_MLVFP ENV POLYPROTEIN PRECURSOR FRIEND MURINE LEUKEMIA VIRUS520-564 576-610 (ISOLATE PVC-211) PENV_MLVHO ENV POLYPROTEIN PRECURSORHOMULV MURINE LEUKEMIA VIRUS 504-551 563-597 PENV_MLVKI ENV POLYPROTEINKIRSTEN MURINE LEUKEMIA VIRUS 40-92 104-138 PENV_MLVMO ENV POLYPROTEINPRECURSOR MOLONEY MURINE LEUKEMIA VIRUS 502-554 566-600 PENV_MLVRD ENVPOLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS 497-549 561-595PENV_MLVRK ENV POLYPROTEIN PRECURSOR RADIATION MURINE LEUKEMIA VIRUS497-549 561-595 (STRAIN KAPLAN) PENV_MMTVB ENV POLYPROTEIN MOUSE MAMMARYTUMOR VIRUS (STRAIN BR6) 477-539 556-612 PENV_MMTVG ENV POLYPROTEINMOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 477-539 556-612 PENV_MPMV ENVPOLYPROTEIN SIMIAN MASON-PFIZER VIRUS 408-474 PENV_MSVFB ENV POLYPROTEINFBJ MURINE OSTEOSARCOMA VIRUS 43-95 107-141 PENV_OMVVS ENV POLYPROTEINPRECURSOR OVINE LENTIVIRUS (STRAIN SA-OMVV) 22-64 185-223 664-746780-816 PENV_RMCFV ENV POLYPROTEIN PRECURSOR RAUSCHER MINK CELLFOCUS-INDUCING VIRUS 484-528 540-574 PENV_RSFFV ENV POLYPROTEINPRECURSOR RAUSCHER SPLEEN FOCUS-FORMING VIRUS 342-376 PENV_SFV1 ENVPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1)  1-41 101-140 154-205 321-355563-651 658-693 866-904 PENV_SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS(TYPE 3/  5-46 158-209 319-357 560-706 863-901 STRAIN LK3) PENV_SIVA1ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 269-310 551-623643-693 PRECURSOR (AGM155 ISOLATE) PENV_SIVAG ENVELOPE POLYPROTEIN GP160SIMIAN IMMUNODEFICIENCY VIRUS 556-628 651-699 808-852 PRECURSOR (AGM3ISOLATE) PENV_SIVAI ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCYVIRUS 257-291 336-370 535-607 627-684 792-840 PRECURSOR (ISOLATEAGM/CLONE GR1 PENV_SIVAT ENVELOPE POLYPROTEIN GP160 SIMIANIMMUNODEFICIENCY VIRUS 264-298 549-621 644-692 796-833 PRECURSOR (TYO-1ISOLATE) PENV_SIVCZ ENVELOPE POLYPROTEIN GP160 CHIMPANZEEIMMUNODEFICIENCY VIRUS 253-291 330-365 512-584 669-703 803-837 PRECURSOR(SIV(CPZ)) PENV_SIVGB ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCYVIRUS 566-654 677-725 PRECURSOR (ISOLATE GB1) PENV_SIVM1 ENVELOPEPOLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 114-151 465-506 528-613635-725 809-864 PRECURSOR (MM142-83 ISOLATE) PENV_SIVM2 ENVELOPEPOLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS  71-109 161-219 245-286PRECURSOR (MM251 ISOLATE) PENV_SIVMK ENVELOPE POLYPROTEIN GP160 SIMIANIMMUNODEFICIENCY VIRUS 464-505 540-612 638-724 PRECURSOR (K6W ISOLATE)PENV_SIVML ENVELOPE POLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS464-505 540-612 638-724 PRECURSOR (K78 ISOLATE) PENV_SIVS4 ENVELOPEPOLYPROTEIN GP160 SIMIAN IMMUNODEFICIENCY VIRUS 466-509 517-616 638-728812-853 PRECURSOR (F236/SMH4 ISOLATE) PENV_SIVSP ENVELOPE POLYPROTEINGP160 SIMIAN IMMUNODEFICIENCY VIRUS 470-513 521-620 642-732 811-848PRECURSOR (PBJ/BC13 ISOLATE) PENV_SMRVH ENV POLYPROTEIN PRECURSORSQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-466 PENV_SRV1 ENV POLYPROTEINSIMIAN RETROVIRUS SRV-1 409-475 PENV_VILV ENV POLYPROTEIN PRECURSORVISNA LENTIVIRUS (STRAIN 1514) 21-62 184-222 637-740 773-809 PENV_VILV1ENV POLYPROTEIN PRECURSOR VISNA LENTIVIRUS 21-62 184-222 643-746 780-816(STRAIN 1514/CLONE LV1-1KS1) PENV_VILV2 ENV POLYPROTEIN PRECURSOR VISNALENTIVIRUS 21-62 184-222 645-748 782-818 (STRAIN 1514/CLONE LV1-1KS2)PERBA_AVIER ERBA ONCOGENE PROTEIN AVIAN ERYTHROBLASTOSIS VIRUS 106-140(STRAIN ES4) PETF1_FOWP1 EARLY TRANSCRIPTION FACTOR FOWLPOX VIRUS(STRAIN FP-1) 190-224 553-587 70 KD SUBUNIT PETF1_SFVKA EARLYTRANSCRIPTION FACTOR SHOPE FIBROMA VIRUS (STRAIN KASZA) 37-71 267-340550-587 70 KD SUBUNIT PETF1_VACCC EARLY TRANSCRIPTION FACTOR VACCINIAVIRUS (STRAIN COPENHAGEN) 23-71 307-341 70 KD SUBUNIT PETF1_VACCV EARLYTRANSCRIPTION FACTOR VACCINIA VIRUS (STRAIN WR) 23-71 307-341 70 KDSUBUNIT PETF2_VACCC EARLY TRANSCRIPTION FACTOR VACCINIA VIRUS (STRAINCOPENHAGEN) 52-97 174-208 82 KD SUBUNIT PETF2_VARV EARLY TRANSCRIPTIONFACTOR VARIOLA VIRUS 52-97 174-208 82 KD SUBUNIT PEXON_HCMVA ALKALINEEXONUCLEASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  80-114 PEXON_HSVEBALKALINE EXONUCLEASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  89-141PEXON_PRVNJ ALKALINE EXONUCLEASE PSEUDORABIES VIRUS (STRAIN NIA-3) 82-120 PEXON_VZVD ALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAINDUMAS) 109-157 342-383 PFIB2_ADE40 41.4 KD FIBER PROTEIN HUMANADENOVIRUS TYPE 40 182-237 PFIB2_ADE41 41.4 KD FIBER PROTEIN HUMANADENOVIRUS TYPE 41 182-223 PFIBP_ADE03 FIBER PROTEIN HUMAN ADENOVIRUSTYPE 3 156-194 PFIBP_ADE07 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 7 176-210PFIBP_ADE40 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 303-352 PFIBP_ADE41FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 320-366 PFIBP_ADEB3 FIBER PROTEINBOVINE ADENOVIRUS TYPE 3 181-215 585-626 PFOSX_MSVFR V-FOS/FOXTRANSFORMING PROTEIN FBR MURINE OSTEOSARCOMA VIRUS 131-169 PFOS_AVINKP55-V-FOS TRANSFORMING PROTEIN AVIAN RETROVIRUS NK24 109-152 PFOS_MSVFBP55-V-FOS TRANSFORMING PROTEIN FBJ MURINE OSTEOSARCOMA VIRUS 155-193PGAGC_AVISC P47(GAG-CRK) PROTEIN AVIAN SARCOMA VIRUS (STRAIN CT10) 57-101 PGAG_AVEV1 GAG POLYPROTEIN AVIAN ENDOGENOUS VIRUS EV-1 57-94PGAG_AVEV2 GAG POLYPROTEIN AVIAN ENDOGENOUS ROUS-ASSOCIATED  6-43VIRUS-0 PGAG_AVIMC GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC2957-94 PGAG_AVIMD GAG POLYPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HB1 57-94PGAG_AVISU CORE PROTEIN P19 AVIAN SARCOMA VIRUS (STRAIN UR2) 57-94PGAG_AVISY GAG POLYPROTEIN AVIAN SARCOMA VIRUS (STRAIN Y73) 57-94PGAG_BIV06 GAG POLYPROTEIN (P53) BOVINE IMMUNODEFICIENCY VIRUS  1-41(ISOLATE 106) PGAG_EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 61-118 (CLONE CL22) PGAG_FIVPE GAG POLYPROTEIN FELINE IMMUNODEFICIENCYVIRUS  76-110 (ISOLATE PETALUMA) PGAG_FIVSD GAG POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS  76-110 (ISOLATE SAN DIEGO) PGAG_FIVT2 GAGPOLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS  76-110 (ISOLATE TM2) PGAG_FLVGAG POLYPROTEIN FELINE LEUKEMIA VIRUS 496-537 PGAG_FOAMV GAG POLYPROTEINHUMAN SPUMARETROVIRUS 130-186 391-425 439-480 607-655 PGAG_FSVMD GAGPOLYPROTEIN FELINE SARCOMA VIRUS (STRAIN MCDONOUGH) 499-534 PGAG_FUJSVGAG POLYPROTEIN FUJINAMI SARCOMA VIRUS 57-94 PGAG_GALV GAG POLYPROTEINGIBBON APE LEUKEMIA VIRUS 393-444 PGAG_HV1A2 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  87-133 294-328 (ARV2/SF2 ISOLATEPGAG_HV1B1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131292-326 (BH10 ISOLATE) PGAG_HV1B5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  90-131 292-326 (BH5 ISOLATE) PGAG_HV1BR GAG POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (BRU ISOLATE)PGAG_HV1C4 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131292-326 (CDC-451 ISOLATE) PGAG_HV1EL GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  93-131 292-326 (ELI ISOLATE) PGAG_HV1H2GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326(HXB2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1  87-131 292-326 (JH3 ISOLATE) PGAG_HV1JR GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  87-131 292-326 (JRCSF ISOLATE) PGAG_HV1MAGAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-137 (MALISOLATE) PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-134 295-329 (MN ISOLATE) PGAG_HV1N5 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (NEW YORK-5 ISOLPGAG_HV1ND GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-128289-323 (NDK ISOLATE) PGAG_HV1OY GAG POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  90-131 292-326 (OYI ISOLATE) PGAG_HV1PV GAG POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131 292-326 (PV22 ISOLATE)PGAG_HV1RH GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  90-131292-326 (RF/HAT ISOLATE) PGAG_HV1U4 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  87-127 (STRAIN UGANDAN PGAG_HV1W2 GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 292-326 (WMJ2 ISOLATE)PGAG_HV1Z2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  87-132293-327 (Z2/CDC-Z34 ISOLAT PGAG_HV2SB GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 292-326 293-327 (ISOLATE SBLISY) PGAG_IPHARETROVIRUS-RELATED GAG POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 93-127 320-357 PGAG_IPMA RETROVIRUS-RELATED GAG POLYPROTEIN MOUSEINTRACISTERNAL A-PARTICLE  67-103 PGAG_IPMAE RETROVIRUS-RELATED GAGPOLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE  89-133 138-172 PGAG_JSRVGAG POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 470-504 PGAG_MMTVBGAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6)  83-151 156-190PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR)  83-151156-190 PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 222-260PGAG_RSVP GAG POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C) 57-94PGAG_SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A 102-139490-531 (SCV-L-A) PGAG_SFV1 GAG POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1)128-177 378-416 583-634 PGAG_SFV3L GAG POLYPROTEIN SIMIAN FOAMY VIRUS(TYPE 3/ 373-407 435-522 591-632 STRAIN LK3) PGAG_SIVA1 GAG POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 302-336 (AGM155 ISOLATE) PGAG_SIVAG GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 306-340 (AGM3 ISOLATE)PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 183-217 473-507(ISOLATE AGM/CLONE GR1 PGAG_SIVAT GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 302-336 (TYO-1 ISOLATE) PGAG_SIVCZ GAGPOLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 301-335 (SIV(CPZ))PGAG_SIVGB GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 163-204 223-267283-317 (ISOLATE GB1) PGAG_SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS394-431 PHELI_HSV11 PROBABLE HELICASE HERPES SIMPLEX VIRUS (TYPE1/STRAIN 17) 172-206 769-820 PHELI_HSV2H PROBABLE HELICASE HERPESSIMPLEX VIRUS (TYPE 2/STRAIN HG52) 468-502 670-721 PHELI_HSVSA PROBABLEHELICASE HERPESVIRUS SAIMIRI (STRAIN 11) 158-203 413-449 599-633PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)445-517 782-821 PHEMA_CVBF HEMAGGLUTININ-ESTERASE PRECURSOR BOVINECORONAVIRUS (STRAIN F15) 208-242 PHEMA_CVBLY HEMAGGLUTININ-ESTERASEPRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 208-242 PHEMA_CVBMHEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS)208-242 PHEMA_CVBQ HEMAGGLUTININ-ESTERASE PRECURSOR BOVINE CORONAVIRUS(STRAIN QUEBEC), 208-242 PHEMA_CVHOC HEMAGGLUTININ-ESTERASE PRECURSORHUMAN CORONAVIRUS (STRAIN OC43) 208-242 PHEMA_IAAIC HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/AICHI/2/68) 380-456 PHEMA_IABANHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/BANGKOK/1/79)364-440 PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454(STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PHEMA_IACKA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 378-454 (STRAIN A/CHICKEN/ALABAMA/1/75) PHEMA_IACKGHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 108-142 375-475 494-528(STRAIN A/CHICKEN/GERMANY/N/49) PHEMA_IACKP HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 360-452 487-532 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83)PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-452 487-532(STRAIN A/CHICKEN/PENNSYLVANIA/1370/ PHEMA_IACKS HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 377-469 504-549 (STRAIN A/CHICKEN/SCOTLAND/59)PHEMA_IACKV HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 377-469(STRAIN A/CHICKEN/VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 378-454 (STRAIN A/DUCK/ALBERTA/28/76) PHEMA_IADA2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 495-547 (STRAINA/DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 380-453 (STRAIN A/DUCK/ALBERTA/78/76) PHEMA_IADA4 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAINA/DUCK/ALBERTA/35/76) PHEMA_IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 378-454 (STRAIN A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 377-472 (STRAINA/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/8/80)PHEMA_IADH3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAINA/DUCK/HOKKAIDO/33/80) PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/21/82)PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAINA/DUCK/HOKKAIDO/9/85) PHEMA_IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 364-440 (STRAIN A/DUCK/HOKKAIDO/10/85) PHEMA_IADIR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 379-471 506-551 (STRAINA/DUCK/IRELAND/113/83) PHEMA_IADM1 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 21-55 (STRAIN A/DUCK/MEMPHIS/546/76) PHEMA_IADM2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/DUCK/MEMPHIS/928/74)PHEMA_IADNY HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAINA/DUCK/NEW YORK/12/78) PHEMA_IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 378-454 (STRAIN A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAINA/DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 380-456 (STRAIN A/DUCK/UKRAINE/1/63) PHEMA_IAEN7 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/ENGLAND/321/77 PHEMA_IAFPRHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-477 (STRAIN A/FOWL PLAGUEVIRUS/ROSTOCK PHEMA_IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS378-454 (STRAIN A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 378-473 (STRAIN A/GULL/MARYLAND/704/77)PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-476 (STRAINA/GULL/ASTRAKHAN/227/84) PHEMA_IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 379-455 (STRAIN A/EQUINE/ALGIERS/72) PHEMA_IAHC6 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 112-146 360-484 503-537 (STRAINA/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/CAMBRIDGE/1/73)PHEMA_IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 360-484 503-537(STRAIN A/EQUINE/C.DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 360-484 503-537 (STRAIN A/EQUINE/DETROIT/1/64)PHEMA_IAHFO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAINA/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS 379-455 (STRAIN A/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAINA/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/LEXINGTON/1/66)PHEMA_IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484503-537 (STRAIN A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/MIAMI/1/63PHEMA_IAHNM HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAINA/EQUINE/NEW MARKET/76) PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/NEW MARKET/1/77)PHEMA_IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484503-537 (STRAIN A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/ROMANIA/80)PHEMA_IAHSA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAINA/EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 112-146 360-484 503-537 (STRAIN A/EQUINE/SAO PAULO/1/76)PHEMA_IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 112-146 360-484503-537 (STRAIN A/EQUINE/SWITZERLAND/137/72) PHEMA_IAHTE HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 379-455 (STRAIN A/EQUINE/TENNESSEE/5/86)PHEMA_IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-455 (STRAINA/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS379-455 (STRAIN A/EQUINE/URUGUAY/1/63) PHEMA_IAJAP HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 375-467 502-547 (STRAIN A/JAPAN/305/57PHEMA_IAKIE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 376-478 506-541(STRAIN A/KIEV/59/79) PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 376-478 506-548 (STRAIN A/LENINGRAD/54/1) PHEMA_IAMAAHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 377-453 (STRAINA/MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 382-458 (STRAIN A/MALLARD/ASTRAKHAN/263/82)PHEMA_IAMAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAINA/MALLARD/NEW YORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 380-456 (STRAIN A/MEMPHIS/1/71) PHEMA_IAME2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAINA/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS364-440 (STRAIN A/MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 108-142 375-475 (STRAIN A/MINKS/SWEDEN/84) PHEMA_IANT6HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/NT/60/68)PHEMA_IAPIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-477 496-534(STRAIN A/PILOT WHALE/MAINE/328/84) PHEMA_IAPUE HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 376-478 506-548 (STRAIN A/PUERTO RICO/8/34)PHEMA_IARUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 378-454 (STRAINA/RUDDY TURNSTONE/NEW JERSE PHEMA_IASE2 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 378-454 (STRAIN A/SEAL/MASSACHUSETTS/133/82)PHEMA_IASH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-474 506-552(STRAIN A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTA HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 112-146 377-469 (STRAIN A/STARLING/VICTORIA/5156/85)PHEMA_IATKI HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-471 506-551(STRAIN A/TURKEY/IRELAND/1378/83) PHEMA_IATKM HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS 378-454 (STRAIN A/TURKEY/MINNESOTA/833/80 PHEMA_IATKOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 392-470 504-548 (STRAINA/TURKEY/ONTARIO/7732/66) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS 378-454 493-540 (STRAIN A/TURKEY/ONTARIO/6118/68) PHEMA_IATKRHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 30-64 374-474 (STRAINA/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 373-472 487-539 (STRAIN A/TURKEY/WISCONSIN/1/66) PHEMA_IATRAHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 21-55 (STRAINA/TERN/AUSTRALIA/G70C/75) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS 387-456 (STRAIN A/UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 376-478 506-548 (STRAIN A/USSR/90/77PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 381-457 (STRAINA/VICTORIA/3/75) PHEMA_IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS375-477 505-547 (STRAIN A/WILSON-SMITH/33) PHEMA_IAZCO HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS 380-456 (STRAIN A/SWINE/COLORADO/1/77)PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 364-440 (STRAINA/SWINE/HONG KONG/81/78) PHEMA_IAZH3 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 364-440 (STRAIN A/SWINE/HONG KONG/126/82) PHEMA_IAZINHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 379-478 506-548 (STRAINA/SWINE/INDIANA/1726/88) PHEMA_IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS 379-478 506-547 (STRAIN A/SWINE/NEW JERSEY/11/76) PHEMA_IAZUKHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS 380-456 (STRAINA/SWINE/UKKEL/1/84 PHEMA_INBBE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS388-473 (STRAIN B/BEIJING/1/87 PHEMA_INBBO HEMAGGLUTININ PRECURSORINFLUENZA B VIRUS 378-463 (STRAIN B/BONN/43) PHEMA_INBEN HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/ENGLAND/222/82)PHEMA_INBHK HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 381-463 (STRAINB/HONG KONG/8/73) PHEMA_INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS387-472 (STRAIN B/LEE/40) PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZAB VIRUS 377-462 (STRAIN B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS 381-468 (STRAIN B/MEMPHIS/6/86) PHEMA_INBORHEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAIN B/OREGON/5/80)PHEMA_INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 386-471 (STRAINB/SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS 379-464 (STRAIN B/USSR/100/83) PHEMA_INBVI HEMAGGLUTININ PRECURSORINFLUENZA B VIRUS 381-466 (STRAIN B/VICTORIA/3/85) PHEMA_INBVKHEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS 388-473 (STRAINB/VICTORIA/2/87) PHEMA_INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS483-571 (STRAIN C/CALIFORNIA/78) PHEMA_INCEN HEMAGGLUTININ PRECURSORINFLUENZA C VIRUS 471-559 (STRAIN C/ENGLAND/892/83) PHEMA_INCGLHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/GREATLAKES/1167/54) PHEMA_INCHY HEMAGGLUTININ INFLUENZA C VIRUS 470-558(STRAIN C/HYOGO/1/83) PHEMA_INCJH HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS 484-572 (STRAIN C/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTINININFLUENZA C VIRUS 470-558 (STRAIN C/KYOTO/41/82) PHEMA_INCMIHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 470-558 (STRAINC/MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ INFLUENZA C VIRUS 470-558(STRAIN C/NARA/82) PHEMA_INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS471-559 (STRAIN C/PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ PRECURSORINFLUENZA C VIRUS 471-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA_INCP3MEASLES VIRUS (STRAIN HALLE) INFLUENZA C VIRUS 471-559 (STRAINC/PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS 471-559 (STRAIN C/TAYLOR/1233/47 PHEMA_INCYA HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS 471-559 (STRAIN C/YAMAGATA/10/81)PHEMA_MEASE HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAIN EDMONSTON)46-90 PHEMA_MEASH HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS (STRAINHALLE) 46-90 PHEMA_MEASI HEMAGGLUTININ-NEURAMINIDASE MEASLES VIRUS(STRAIN IP-3-CA) 46-87 PHEMA_MEASY HEMAGGLUTININ-NEURAMINIDASE MEASLESVIRUS (STRAIN YAMAGATA-1) 46-87 PHEMA_MUMP1 HEMAGGLUTININ-NEURAMINIDASEMUMPS VIRUS (STRAIN SBL-1 34-99 PHEMA_MUMPM HEMAGGLUTININ-NEURAMINIDASEMUMPS VIRUS (STRAIN MIYAHARA VACCINE) 34-99 PHEMA_MUMPRHEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN RW) 34-99 PHEMA_MUMPSHEMAGGLUTININ-NEURAMINIDASE MUMPS VIRUS (STRAIN SBL) 34-99 PHEMA_NDVAHEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  8-52 477-529(STRAIN AUSTRALIA-VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ-NEURAMINIDASENEWCASTLE DISEASE VIRUS  1-49 (STRAIN BEAUDETTE C/45) PHEMA_NDVDHEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-52 (STRAIND26/76) PHEMA_NDVM HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ-NEURAMINIDASENEWCASTLE DISEASE VIRUS  1-52 (STRAIN QUEENSLAND/66) PHEMA_NDVTGHEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS  1-49 (STRAIN TEXASG.B./48) PHEMA_NDVU HEMAGGLUTININ-NEURAMINIDASE NEWCASTLE DISEASE VIRUS 1-52 (STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ-NEURAMINIDASE PHOCINEDISTEMPER VIRUS 39-73 PHEMA_PI1HW HEMAGGLUTININ-NEURAMINIDASE HUMANPARAINFLUENZA 1 VIRUS  66-110 (STRAIN WASHINGTON/1957) PHEMA_PI2HHEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS 247-281PHEMA_PI2HT HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 2 VIRUS247-281 (STRAIN TOSHIBA) PHEMA_PI3B HEMAGGLUTININ-NEURAMINIDASE BOVINEPARAINFLUENZA 3 VIRUS 38-93 PHEMA_PI3H4 HEMAGGLUTININ-NEURAMINIDASEHUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN NIH 47885)PHEMA_PI3HA HEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS 20-110 394-428 (STRAIN AUS/124854/74) PHEMA_PI3HTHEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428(STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ-NEURAMINIDASE HUMANPARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN TEX/9305/82) PHEMA_PI3HVHEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428(STRAIN TEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ-NEURAMINIDASE HUMANPARAINFLUENZA 3 VIRUS  13-110 394-428 (STRAIN WASH/641/79) PHEMA_PI3HXHEMAGGLUTININ-NEURAMINIDASE HUMAN PARAINFLUENZA 3 VIRUS  13-110 394-428(STRAIN WASH/1511/73) PHEMA_PI4HA HEMAGGLUTININ-NEURAMINIDASE HUMANPARAINFLUENZA 4A VIRUS 54-88 (STRAIN TOSHIBA) PHEMA_RACVI HEMAGGLUTININPRECURSOR RACCOON POXVIRUS 166-214 256-290 PHEMA_RINDKHEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN KABETE O) 46-87PHEMA_RINDL HEMAGGLUTININ-NEURAMINIDASE RINDERPEST VIRUS (STRAIN L)46-87 191-225 PHEMA_SEND5 HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS(STRAIN Z/HOST MUTANTS)  57-110 PHEMA_SENDF HEMAGGLUTININ-NEURAMINIDASESENDAI VIRUS (STRAIN FUSHIMI)  57-110 PHEMA_SENDHHEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HARRIS)  57-110PHEMA_SENDJ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN HVJ) 57-110 PHEMA_SENDZ HEMAGGLUTININ-NEURAMINIDASE SENDAI VIRUS (STRAIN Z) 57-110 PHEMA_SV41 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 41 18-52387-421 PHEMA_SV5 HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (STRAIN W3)27-82 PHEMA_SV5LN HEMAGGLUTININ-NEURAMINIDASE SIMIAN VIRUS 5 (ISOLATEHUMAN/LN) 27-82 PHEMA_VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS 177-211PHEX3_ADE02 PERIPENTONAL HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 2 90-134 PROTEIN PHEX3_ADE05 PERIPENTONAL HEXON-ASSOCIATED HUMANADENOVIRUS TYPE 5  90-134 PROTEIN PHEX9_ADE02 HEXON-ASSOCIATED PROTEINHUMAN ADENOVIRUS TYPE 2  85-134 PHEX9_ADE05 HEXON-ASSOCIATED PROTEINHUMAN ADENOVIRUS TYPE 5  85-134 PHEX9_ADE07 HEXON-ASSOCIATED PROTEINHUMAN ADENOVIRUS TYPE 7,  93-138 AND HUMAN ADENOVIRUS TYPE PHEX9_ADE12HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 12  88-137 PHEX9_ADE41HEXON-ASSOCIATED PROTEIN HUMAN ADENOVIRUS TYPE 41  67-126 PHEX9_ADEC2HEXON-ASSOCIATED PROTEIN CANINE ADENOVIRUS TYPE 2  53-103 PHEX9_ADENTHEXON-ASSOCIATED PROTEIN TUPAIA ADENOVIRUS  61-109 PHEX_ADE02 HEXONPROTEIN HUMAN ADENOVIRUS TYPE 2 341-386 433-467 583-624 PHEX_ADE05 HEXONPROTEIN HUMAN ADENOVIRUS TYPE 5 330-379 PHEX_ADE40 HEXON PROTEIN HUMANADENOVIRUS TYPE 40 303-352 408-449 553-587 PHEX_ADE41 HEXON PROTEINHUMAN ADENOVIRUS TYPE 41 306-355 555-589 PHEX_ADEB3 HEXON PROTEIN BOVINEADENOVIRUS TYPE 3 301-346 385-419 544-578 705-739 PHRG_COWPX HOST RANGEPROTEIN COWPOX VIRUS 320-395 455-489 PI226_ASFB7 LATE PROTEIN 1226RAFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 110-151 PIBMP_CAMV4 INCLUSIONBODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D4)  3-44 378-419PIBMP_CAMVB INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS(STRAIN BARI 1) 379-420 PIBMP_CAMVC INCLUSION BODY MATRIX PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841)  3-37 378-419 PIBMP_CAMVDINCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 3-44 378-419 PIBMP_CAMVE INCLUSION BODY MATRIX PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN BBC)  3-37 378-419 PIBMP_CAMVJ INCLUSION BODYMATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS  3-37 378-419 (STRAIN S-JAPAN)PIBMP_CAMVN INCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS(STRAIN NY8153)  3-37 378-419 PIBMP_CAMVP INCLUSION BODY MATRIX PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN PV147)  3-37 374-419 PIBMP_CAMVSINCLUSION BODY MATRIX PROTEIN CAULIFLOWER MOSAIC VIRUS  3-37 378-419(STRAIN STRASBOURG) PIBMP_CERV INCLUSION BODY MATRIX PROTEIN CARNATIONETCHED RING VIRUS  3-37 PIBMP_FMVD INCLUSION BODY MATRIX PROTEIN FIGWORTMOSAIC VIRUS (STRAIN DXS)  1-51 372-406 PIBMP_SOCMV INCLUSION BODYMATRIX PROTEIN  1-48 132-179 PIC18_HCMVA PROBABLE PROCESSING ANDTRANSPORT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 53-98 290-324 498-532PROTEIN PIC18_HSV11 PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 331-365 PIC18_HSV1A PROCESSING AND TRANSPORTPROTEIN HERPES SIMPLEX VIRUS (TYPE 1/ 331-365 STRAIN ANGELOTTI)PIC18_HSV1F PROCESSING AND TRANSPORT PROTEIN HERPES SIMPLEX VIRUS (TYPE1/STRAIN F) 324-362 PIC18_HSVB2 PROBABLE PROCESSING AND TRANSPORT BOVINEHERPESVIRUS TYPE 2 (STRAIN BMV) 466-500 PROTEIN PIC18_HSVEB PROBABLEPROCESSING AND TRANSPORT HERPESVIRUS TYPE 1 (ISOLATE HVS25A) 341-375PROTEIN PIC18_HSVSA PROBABLE PROCESSING AND TRANSPORT HERPESVIRUSSAIMIRI (STRAIN 11) 58-99 361-395 PROTEIN PIC18_MCMVS PROBABLEPROCESSING AND TRANSPORT MURINE CYTOMEGALOVIRUS (STRAIN SMITH)  60-112290-340 647-691 PROTEIN PIC18_PRVIF PROBABLE PROCESSING AND TRANSPORTPSEUDORABIES VIRUS 299-333 303-337 PROTEIN (STRAININDIANA-FUNKHAUSER/BECKE PICP0_HSVBJ TRANS-ACTING TRANSCRIPTIONAL BOVINEHERPESVIRUS TYPE 1 (STRAIN JURA) 190-224 PROTEIN ICP0 PICP0_HSVBKTRANS-ACTING TRANSCRIPTIONAL BOVINE HERPESVIRUS TYPE 1 (STRAIN K22)190-224 PROTEIN ICP0 PICP4_HSVMG TRANS-ACTING TRANSCRIPTIONAL MAREK'SDISEASE HERPESVIRUS (STRAIN GA) 1022- ACTIVATOR PR 1056 PICP4_VZVDTRANS-ACTING TRANSCRIPTIONAL VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)920-954 PROTEIN ICP4 PIE63_HCMVA TRANSCRIPTIONAL REGULATOR IE63 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 207-241 HOMOLOG PIE63_HSV11TRANSCRIPTIONAL REGULATOR IE63 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)241-275 PIE63_HSVEB TRANSCRIPTIONAL REGULATOR IE63 EQUINE HERPESVIRUSTYPE 1 (STRAIN AB4P) 282-316 HOMOLOG PIE63_VZVD TRANSCRIPTIONALREGULATOR IE63 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 195-229 258-306HOMOLOG PIE68_HSVE4 IMMEDIATE-EARLY PROTEIN IE68 EQUINE HERPESVIRUS TYPE4 (STRAIN 1942)  87-121 PIE68_HSVEB IMMEDIATE-EARLY PROTEIN IE68 EQUINEHERPESVIRUS TYPE 1 (STRAIN AB4P)  99-133 PIE68_HSVSA IMMEDIATE-EARLYPROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-85 PIR05_HCMVA HYPOTHETICALPROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)_(—) 13-47 PIR12_HCMVAHYPOTHETICAL PROTEIN IRL12 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  74-162PKABL_FSVHY TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 280-314TRANSFORMING PROT (STRAIN HARDY-ZUCKERMAN 2) PKABL_MLVABTYROSINE-PROTEIN KINASE ABELSON MURINE LEUKEMIA VIRUS 217-251TRANSFORMING PROT PKAKT_MLVAT AKT KINASE TRANSFORMING PROTEIN AKT8MURINE LEUKEMIA VIRUS 172-227 263-304 PKFES_FSVGA TYROSINE-PROTEINKINASE FELINE SARCOMA VIRUS 23-64 104-178 TRANSFORMING PROT (STRAINGARDNER-ARNSTEIN) PKFGR_FSVGR TYROSINE-PROTEIN KINASE FELINE SARCOMAVIRUS 218-252 TRANSFORMING PROT (STRAIN GARDNER-RASHEED) PKFMS_FSVMD FMSTYROSINE KINASE TRANSFORMING FELINE SARCOMA VIRUS 313-362 638-679812-849 PROTEIN (STRAIN MCDONOUGH) PKFPS_AVISP TYROSINE-PROTEIN KINASEAVIAN SARCOMA VIRUS (STRAIN PRCII) 65-99 TRANSFORMING PROT PKFPS_FUJSVTYROSINE-PROTEIN KINASE FUJINAMI SARCOMA VIRUS 65-99 152-251 348-398TRANSFORMING PROT PKITH_AMEPV THYMIDINE KINASE AMSACTA MOOREIENTOMOPOXVIRUS 47-81 PKITH_CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAINKS-1 38-82 PKITH_EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS (STRAIN B95-8)228-262 431-472 PKITH_HSV11 THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE1/STRAIN 17)  90-124 PKITH_HSV1C THYMIDINE KINASE HERPES SIMPLEX VIRUS(TYPE 1/STRAIN CL101)  90-124 PKITH_HSV1E THYMIDINE KINASE HERPESSIMPLEX VIRUS (TYPE 1/STRAIN HFEM)  90-124 PKITH_HSV1K THYMIDINE KINASEHERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS)  90-124 PKITH_HSV1S THYMIDINEKINASE HERPES SIMPLEX VIRUS (TYPE 1/STRAIN SC16)  90-124 PKITH_HSV23THYMIDINE KINASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333)  91-125PKITH_HSVBM THYMIDINE KINASE BOVINE HERPES VIRUS TYPE 3 (STRAIN WC11)616-665 PKITH_HSVE4 THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 4 (STRAIN1942) 19-53 178-219 PKITH_HSVEB THYMIDINE KINASE EQUINE HERPESVIRUS TYPE1 (STRAIN AB4P) 19-53 178-230 PKITH_HSVF THYMIDINE KINASE FELINEHERPESVIRUS (FELID HERPESVIRUS 1) 180-214 PKITH_HSVMR THYMIDINE KINASEMARMOSET HERPESVIRUS 52-86 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUSSAIMIRI (STRAIN 11) 337-389 PKITH_PRVN3 THYMIDINE KINASE PSEUDORABIESVIRUS (STRAIN NIA-3) 161-202 PKMIL_AVIMH MIL SERINE/THREONINE-PROTEINKINASE AVIAN RETROVIRUS MH2  69-103 TRANSF PKR15_HSVI1 GENE 15 PROTEINKINASE ICTALURID HERPESVIRUS 1 190-224 PKR2_HSVI1 PROBABLESERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 57-91281-315 KINASE PKR74_HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPESVIRUS1 487-528 597-631 PKRAF_MSV36 RAF SERINE/THREONINE-PROTEIN MURINESARCOMA VIRUS 3611 11-45 KINASE TRANSF PKRB1_VACCC 30 KD PROTEIN KINASEHOMOLOG VACCINIA VIRUS (STRAIN COPENHAGEN) 127-168 PKRB1_VACCV 30 KDPROTEIN KINASE HOMOLOG VACCINIA VIRUS (STRAIN WR) 127-168 PKRB1_VARV 30KD PROTEIN KINASE HOMOLOG VARIOLA VIRUS 123-171 PKRB2_VACCC POSSIBLEPROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-181PKRB2_VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN WR)147-181 PKRF1_VACCC POSSIBLE PROTEIN KINASE F10 VACCINIA VIRUS (STRAINCOPENHAGEN) 169-203 PKRF1_VACCP POSSIBLE PROTEIN KINASE F10 VACCINIAVIRUS (STRAIN L-1VP) 136-170 PKRF1_VARV POSSIBLE PROTEIN KINASE F10VARIOLA VIRUS 169-203 PKROS_AVISU ROS TYROSINE KINASE TRANSFORMING AVIANSARCOMA VIRUS (STRAIN UR2) 111-145 PROTEIN PKRYK_AVIR3 TYROSINE-PROTEINKINASE AVIAN RETROVIRUS RPL30 15-66 TRANSFORMING PROT PKTHY_VACCVTHYMIDYLATE KINASE VACCINIA VIRUS (STRAIN WR), 135-169 (STRAINCOPENHAGEN) PKYES_AVISY TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS(STRAIN Y73) 174-233 TRANSFORMING PROT PL100_ADE02 LATE 100 KD PROTEINHUMAN ADENOVIRUS TYPE 2 441-475 PL100_ADE05 LATE 100 KD PROTEIN HUMANADENOVIRUS TYPE 5 223-264 PL100_ADE40 LATE 100 KD PROTEIN HUMANADENOVIRUS TYPE 40 191-232 408-442 PL100_ADE41 LATE 100 KD PROTEIN HUMANADENOVIRUS TYPE 41 199-233 PL52_ADE02 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 2 238-284 301-349 PL52_ADE05 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 5 238-284 301-349 PLMP2_EBV GENE TERMINAL PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 144-179 294-338 PMCEL_SFVKA MRNACAPPING ENZYME SHOPE FIBROMA VIRUS (STRAIN KASZA)  54-152 622-656PMCEL_VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN)  1-41623-657 PMCEL_VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN WR)  1-41623-657 PMCEL_VARV MRNA CAPPING ENZYME VARIOLA VIRUS  1-39 623-657PMCES_VACCC MRNA CAPPING ENZYME VACCINIA VIRUS (STRAIN COPENHAGEN) 72-137 245-286 PMCES_VACCV MRNA CAPPING ENZYME VACCINIA VIRUS (STRAINWR)  72-137 245-286 PMCES_VARV MRNA CAPPING ENZYME VARIOLA VIRUS  72-137245-286 PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS (STRAINBA71V) 116-157 279-313 738-772 PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUMRINGSPOT VIRUS 53-90 PMOVP_PPMVS MOVEMENT PROTEIN PEPPER MILD MOTTLEVIRUS (STRAIN SPAIN) 26-66 PMOVP_TMGMV MOVEMENT PROTEIN TOBACCO MILDGREEN MOSAIC VIRUS 29-66 (TMV STRAIN U2) PMOVP_TMVTO MOVEMENT PROTEINTOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 32-66 PMOVP_TOMVA MOVEMENTPROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 32-80 PMOVP_TOMVL MOVEMENTPROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 32-80 PMTC1_CHVN1 MODIFICATIONMETHYLASE CVIBI CHLORELLA VIRUS NC-1A 222-256 PMTC2_CHVP1 MODIFICATIONMETHYLASE CVIAII PARAMECIUM BURSARIA CHLORELLA VIRUS 1 116-164PMYC_AVIM2 MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS CMII229-266 375-419 PMYC_AVIMC MYC TRANSFORMING PROTEIN AVIANMYELOCYTOMATOSIS VIRUS MC29 230-267 376-420 PMYC_AVIMD MYC TRANSFORMINGPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 230-267 376-420 PMYC_AVIME MYCTRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 377-421 PMYC_AVIOK MYCTRANSFORMING PROTEIN AVIAN RETROVIRUS OK10 224-261 370-414 PMYC_FLV MYCTRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS 393-437 PMYC_FLVTT MYCTRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT 393-437 PNCA2_CVMA5NUCLEOCAPSID PROTEIN MURINE CORONAVIRUS MHV (STRAIN A59) 12-46PNCAP_AINOV NUCLEOCAPSID PROTEIN AINO VIRUS 177-211 PNCAP_BEVNUCLEOCAPSID PROTEIN BERNE VIRUS 46-83 122-156 PNCAP_BRSVA NUCLEOCAPSIDPROTEIN BOVINE RESPIRATOR SYNCYTIAL VIRUS  62-108 163-200 248-303343-383 (STRAIN A51908) PNCAP_BUNGE NUCLEOCAPSID PROTEIN BUNYAVIRUSGERMISTON 176-228 PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE176-229 PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE176-229 PNCAP_BUNYW NUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 175-228PNCAP_CCHFV NUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS223-306 427-461 (ISOLATE C6803 PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINEDISTEMPER VIRUS 137-174 179-217 354-402 (STRAIN ONDERSTEPOORT)PNCAP_CHAV NUCLEOCAPSID PROTEIN CHANDIPURA VIRUS (STRAIN I653514) 40-84321-369 PNCAP_CVBF NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAIN F15)349-383 PNCAP_CVBM NUCLEOCAPSID PROTEIN BOVINE CORONAVIRUS (STRAINMEBUS) 349-383 PNCAP_CVCAE NUCLEOCAPSID PROTEIN CANINE ENTERICCORONAVIRUS (STRAIN K378) 165-227 PNCAP_CVHOC NUCLEOCAPSID PROTEIN HUMANCORONAVIRUS (STRAIN OC43) 349-383 PNCAP_CVMJH NUCLEOCAPSID PROTEINMURINE CORONAVIRUS MHV (STRAIN JHM) 12-46 PNCAP_CVPFS NUCLEOCAPSIDPROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 149-206 CORONAVIRUS (SPNCAP_CVPPU NUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS165-227 CORONAVIRUS (S PNCAP_CVPRS NUCLEOCAPSID PROTEIN PORCINERESPIRATORY CORONAVIRUS 149-228 (STRAIN 86/137004/BRIT PNCAP_CVPRMNUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 149-228 (STRAINRM4) PNCAP_CVRSD NUCLEOCAPSID PROTEIN RAT CORONAVIRUS (STRAIN 681) 12-46PNCAP_CVTKE NUCLEOCAPSID PROTEIN TURKEY ENTERIC CORONAVIRUS 349-383PNCAP_DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 230-306 PNCAP_FIPVNUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS 151-206 (STRAIN79-1146) PNCAP_HANTV NUCLEOCAPSID PROTEIN HANTAAN VIRUS (STRAIN 76-118) 1-35 40-74 333-381 PNCAP_HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS(ISOLATE JC280) 233-297 PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMANRESPIRATORY SYNCYTIAL VIRUS  62-145 163-200 248-303 343-380 (SUBGROUPB/STRAI PNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIALVIRUS  62-145 163-200 248-303 343-380 (STRAIN A2) PNCAP_IBVGNUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 186-227 (STRAINGRAY) PNCAP_IBVK NUCLEOCAPSID PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS186-220 (STRAIN KB8523) PNCAP_JUNIN NUCLEOCAPSID PROTEIN JUNINARENAVIRUS  96-151 PNCAP_LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS (STRAINGA391)  65-113 126-174 PNCAP_LASSJ NUCLEOCAPSID PROTEIN LASSA VIRUS(STRAIN JOSIAH)  65-113 122-174 467-504 PNCAP_LDV NUCLEOCAPSID PROTEINLACTATE DEHYDROGENASE-ELEVATING VIRUS(  3-40 PNCAP_LYCVA NUCLEOCAPSIDPROTEIN LYMPHOCYTIC CHORIOMENINGITIS VIRUS  45-117 460-497 (STRAINARMSTRON PNCAP_LYCVW NUCLEOCAPSID PROTEIN LYMPHOCYTIC CHORIOMENINGITISVIRUS 45-79  83-117 460-497 (STRAIN WE) PNCAP_MAGV NUCLEOCAPSID PROTEINMAGUARI VIRUS 175-228 PNCAP_MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS(STRAIN EDMONSTON) 188-226 363-411 PNCAP_MEASH NUCLEOCAPSID PROTEINMEASLES VIRUS (STRAIN HALLE) 188-226 363-411 PNCAP_MEASI NUCLEOCAPSIDPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 188-226 363-411 PNCAP_MEASYNUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1) 188-226 363-411PNCAP_MOPEI NUCLEOCAPSID PROTEIN MOPEIA VIRUS  65-106 471-505PNCAP_MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN SBL-1) 214-255500-534 PNCAP_MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN MIYAHARAVACCINE) 214-255 PNCAP_PHV NUCLEOCAPSID PROTEIN PROSPECT HILL VIRUS 1-35 40-74 337-392 PNCAP_P11HC NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA1 VIRUS (STRAIN C39) 212-272 441-510 PNCAP_P11HW NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 1 VIRUS 212-272 441-510 (STRAIN WASHINGTON/1957)PNCAP_P12HT NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 2 VIRUS 214-266344-378 (STRAIN TOSHIBA) PNCAP_P13B NUCLEOCAPSID PROTEIN BOVINEPARAINFLUENZA 3 VIRUS 200-403 446-490 PNCAP_P13H4 NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 3 VIRUS  87-135 208-266 344-403 440-491 (STRAIN NIH47885) PNCAP_P14HA NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 4A VIRUS58-94 191-267 (STRAIN TOSHIBA) PNCAP_P14HB NUCLEOCAPSID PROTEIN HUMANPARAINFLUENZA 4B VIRUS 58-94 191-267 (STRAIN 68-333) PNCAP_PIARVNUCLEOCAPSID PROTEIN PICHINDE ARENAVIRUS  65-112 PNCAP_PIRYVNUCLEOCAPSID PROTEIN PIRY VIRUS  71-116 325-359 PNCAP_PUUMH NUCLEOCAPSIDPROTEIN PUUMALA VIRUS (STRAIN HALLNAS B1)  1-35 40-75 337-392PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS (STRAIN SOTKAMO)  1-3540-75 337-385 PNCAP_PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OF MICE 93-141 248-303 344-388 PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS(STRAIN AVO1) 133-167 PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS(STRAIN Z/HOST MUTANTS) 212-272 345-404 PNCAP_SENDE NUCLEOCAPSID PROTEINSENDAI VIRUS (STRAIN ENDERS) 212-272 345-404 PNCAP_SENDZ NUCLEOCAPSIDPROTEIN SENDAI VIRUS (STRAIN Z) 212-272 345-408 PNCAP_SEOUS NUCLEOCAPSIDPROTEIN SEOUL VIRUS (STRAIN SR-11)  1-35 40-74 333-381 PNCAP_SV41NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 215-267 372-406 418-466 PNCAP_SYNVNUCLEOCAPSID PROTEIN SONCHUS YELLOW NET VIRUS 332-366 PNCAP_TACVNUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-84 230-264 PNCAP_TOSVNUCLEOCAPSID PROTEIN TOSCANA VIRUS 215-249 PNCAP_TSWVB NUCLEOCAPSIDPROTEIN TOMATO SPOTTED WILT VIRUS  79-120 (BRAZILIAN ISOLATE CPNH1/BRPNCAP_TSWVH NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILT VIRUS  79-120(HAWAIIAN ISOLATE) PNCAP_TSWVL NUCLEOCAPSID PROTEIN TOMATO SPOTTED WILTVIRUS (STRAIN L3)  79-120 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS 51-102 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIAVIRUS 249-325 (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRALHEMORRHAGIC SEPTICEMIA VIRUS 142-180 249-325 (STRAIN MAKAH) PNCAP_VSVIGNUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS  42-108 (SEROTYPEINDIANA/STRAIN G PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULAR STOMATITISVIRUS  67-115 (SEROTYPE NEW JERSEY/STRA PNCAP_VSVSJ NUCLEOCAPSID PROTEINVESICULAR STOMATITIS VIRUS  42-115 (STRAIN SAN JUAN) PNEF_HV2BE NEGATIVEFACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2  7-48 (ISOLATE BEN)PNEF_HV2D1 NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2  7-41(ISOLATE D194) PNEF_HV2RO NEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 112-160 (ISOLATE ROD) PNEF_HV2SB NEGATIVE FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 2 109-150 (ISOLATE SBLISY) PNEF_HV2STNEGATIVE FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 108-149 (ISOLATE ST)PNEF_SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS  96-140(ISOLATE AGM/CLONE GR1 PNEF_SIVS4 NEGATIVE FACTOR SIMIANIMMUNODEFICIENCY VIRUS  9-43 233-267 (F236/SMH4 ISOLATE) PNRAM_IABDANEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 47-81 BLACKDUCK/AUSTRALIA/702/78 PNRAM_IACAO NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/ 33-74 CAMEL/MONGOLIA/82) PNRAM_IACHI NEURAMINIDASE INFLUENZAA VIRUS (STRAIN A/ 50-91 CHILE/1/83) PNRAM_IACKQ NEURAMINIDASE INFLUENZAA VIRUS (STRAIN A/ 349-383 CHICKEN/PENNSYLVANIA/1370/ PNRAM_IACKRNEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 349-383CHICKEN/PENNSYLVANIA/8125/ PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/ 14-48 DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASE INFLUENZA AVIRUS (STRAIN A/ 14-48 194-229 FOWL PLAGUE VIRUS/WEYBRID PNRAM_IAHCONEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-47 193-227EQUINE/COR/16/74 PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 5-44 361-402 EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZAA VIRUS (STRAIN A/ 50-91 KIEV/59/79) PNRAM_IALEN NEURAMINIDASE INFLUENZAA VIRUS (STRAIN A/ 50-91 LENINGRAD/54/1) PNRAM_IAME1 NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 50-88 MEMPHIS/1/71H-A/BELLAMY/42NPNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 RUDDYTURNSTONE/NEW JERSE PNRAM_IASH2 NEURAMINIDASE INFLUENZA A VIRUS (STRAINA/ 10-44 SHEARWATER/AUSTRALIA/72) PNRAM_IATKR NEURAMINIDASE INFLUENZA AVIRUS (STRAIN A/  7-41 TURKEY/OREGON/71) PNRAM_IATRA NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 49-83 TERN/AUSTRALIA/G70C/75) PNRAM_IAUSSNEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-91 USSR/90/77) PNRAM_IAWHMNEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-91 WHALE/MAINE/1/84)PNRAM_INBBE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-46 348-382BEIJING/1/87) PNRAM_INBHK NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 349-383 HONG KONG/8/73) PNRAM_INBLE NEURAMINIDASE INFLUENZA BVIRUS (STRAIN B/  5-46 349-383 LEE/40) PNRAM_INBLN NEURAMINIDASEINFLUENZA B VIRUS (STRAIN B/  5-39 348-382 LENINGRAD/179/86),(STRAIN B/MPNRAM_INBMD NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 349-383MARYLAND/59) PNRAM_INBMF NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/ 5-46 348-382 MEMPHIS/3/89) PNRAM_INBOR NEURAMINIDASE INFLUENZA B VIRUS(STRAIN B/  5-46 349-383 OREGON/5/80) PNRAM_INBSI NEURAMINIDASEINFLUENZA B VIRUS (STRAIN B/  5-39 349-383 SINGAPORE/222/79) PNRAM_INBUSNEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 349-383 USSR/100/83)PNRAM_INBVI NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/  5-39 348-382VICTORIA/3/85 PNS2_SIDEV PROBABLE STRUCTURAL PROTEIN BOMBYXDENSONUCLEOSIS VIRUS 790-828 PRECURSOR PNSS_INSVN NON-STRUCTURAL PROTEINIMPATIENS NECROTIC SPOT VIRUS  95-129 204-238 (STRAIN NL-07) PNSS_TSWVBNON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS  3-37 (BRAZILIANISOLATE CPNH1/BR PNSS_TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILTVIRUS  3-37 (STRAIN L3) PNTP1_AMEPV NUCLEOSIDE TRIPHOSPHATASE I AMSACTAMOOREI ENTOMOPOXVIRUS 28-69 110-144 PNTP1_CBEPV NUCLEOSIDETRIPHOSPHATASE I CHORISTONEURA BIENNIS ENTOMOPOXVIRUS 122-169 415-449514-555 PNTP1_VACCC NUCLEOSIDE TRIPHOSPHATASE I VACCINIA VIRUS (STRAINCOPENHAGEN) 56-90 248-289 549-599 PNTP1_VACCV NUCLEOSIDE TRIPHOSPHATASEI VACCINIA VIRUS (STRAIN WR) 56-90 248-289 549-599 PNTP1_VARV NUCLEOSIDETRIPHOSPHATASE I VARIOLA VIRUS 154-195 455-505 PP100_HSV6U MAJORANTIGENIC STRUCTURAL PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/ 189-223689-735 STRAIN UGANDA-1102) PPAP1_VACCC POLY(A) POLYMERASE CATALYTICVACCINIA VIRUS (STRAIN COPENHAGEN) 121-180 SUBUNIT PPAP1_VACCV POLY(A)POLYMERASE CATALYTIC VACCINIA VIRUS (STRAIN WR) 121-180 SUBUNITPPAP1_VARV POLY(A) POLYMERASE CATALYTIC VARIOLA VIRUS 121-180 SUBUNITPPAP2_CAPVK POLY(A) POLYMERASE REGULATORY CAPRIPOXVIRUS (STRAIN KS-1)112-146 SUBUNIT PPAP2_FOWPV POLY(A) POLYMERASE REGULATORY FOWLPOX VIRUS 95-154 SUBUNIT PPAP2_VACCC POLY(A) POLYMERASE REGULATORY VACCINIA VIRUS(STRAIN COPENHAGEN) 203-249 SUBUNIT PPAP2_VACCV POLY(A) POLYMERASEREGULATORY VACCINIA VIRUS (STRAIN WR) 203-249 SUBUNIT PPAP2_VARV POLY(A)POLYMERASE REGULATORY VARIOLA VIRUS 203-249 SUBUNIT PPE12_NPVAC 12.1 KDPROTEIN IN PE 5′REGION AUTOGRAPHA CALIFORNICA NUCLEAR 15-56  60-105POLYHEDROSIS VIRUS PPE12_NPVOP 11.5 KD PROTEIN IN P26 5′REGION ORGYIAPSEUDOTSUGATA MULTICAPSID 11-98 POLYHEDROSIS VIRUS PPE38_NPVAC MAJORIMMEDIATE EARLY PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 19-77 197-249POLYHEDROSIS VIRUS PPE38_NPVOP MAJOR IMMEDIATE EARLY PROTEIN ORGYIAPSEUDOTSUGATA MULTICAPSID 190-240 POLYHEDROSIS VIRUS PPE48_NPVAC 48.3 KDPROTEIN IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR  4-42 48-89  97-131INTERGENIC REGION POLYHEDROSIS VIRUS PPE48_NPVOC 47.3 KD PROTEIN INPE-P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 47-82 165-199 INTERGENIC REGIONPOLYHEDROSIS VIRUS PPIV2_ADE07 MATURATION PROTEIN HUMAN ADENOVIRUS TYPE7 414-448 PPIV6_ADE02 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 2 37-71PPIV6_ADE05 PROTEIN VI PRECURSOR HUMAN ADENOVIRUS TYPE 5 37-71PPOL1_BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363743-777 957-991 1265- 2229- 2309- 2368- (GERMAN ISOLATE) 1299 2266 23522404 PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 329-363671-705 743-777 957-994 1265- 2227- 2307- 2366- (JAPANESE STRAIN 11-1)1299 2264 2350 2402 PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINECHROME MOSAIC 120-161 165-216 230-273 377-415 VIRUS PPOL1_GFLV RNA1POLYPROTEIN GRAPEVINE FANLEAF VIRUS 170-212 480-519 636-677 691-7251157- 1378- 1906- 1196 1412 1943 PPOL1_TBRVS RNA1 POLYPROTEIN TOMATOBLACK RING VIRUS (STRAIN S) 223-270 929-977 PPOL1_TRSVR RNA1 POLYPROTEINTOMATO RINGSPOT VIRUS 161-206 (ISOLATE RASPBERRY) PPOL2_BAYMG GENOMEPOLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281 669-732 739-773 787-828(GERMAN ISOLATE) PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAICVIRUS 669-732 739-773 787-828 (JAPANESE STRAIN II-1) PPOL2_GFLV RNA2POLYPROTEIN GRAPEVINE FANLEAF VIRUS 365-406 542-602 PPOL2_TBRVS RNA2POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S)  4-38 PPOL2_TRSVR RNA2POLYPROTEIN TOMATO RINGSPOT VIRUS 158-206 334-368 (ISOLATE RASPBERRY)PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27)849-886 1008- 1382- 1459- 1576- 1064 1416 1507 1617 PPOLG_BVDVN GENOMEPOLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 244-289 446-491 629-663 1033-1303- 1392- 1869- 2226- (ISOLATE NADL) 1074 1344 1443 1910 2260PPOLG_BVDVS GENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 245-289446-491 629-663 1033- 1303- 1392- 1779- 2136- (STRAIN SD-1) 1074 13441443 1820 2170 PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAIC VIRUS 96-130 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAIN COE) 9-43 562-596 664-698 1045- 1498- 1607- 1805- 1901- 1100 1546 1648 18391946 PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9 (STRAIN GRIGGS)15-49 1040- 1895- 1086 1940 PPOLG_COXB1 GENOME POLYPROTEINCOXSACKIEVIRUS B1 15-49 1021- 1876- 1067 1921 PPOLG_COXB3 GENOMEPOLYPROTEIN COXSACKIEVIRUS B3 15-49 1024- 1879- 1070 1924 PPOLG_COXB4GENOME POLYPROTEIN COXSACKIEVIRUS B4 15-49 642-681 1022- 1877- 1068 1922PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 15-49 1024- 1879- 10701924 PPOLG_CYVV GENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154PPOLG_DEN18 GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 836-1) 74-108 PPOLG_DEN1A GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN AHF82-80)  74-108 PPOLG_DEN1C GENOME POLYPROTEIN DENGUE VIRUS TYPE 1(STRAIN CV1636/77)  74-108 PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUSTYPE 1  74-108 832-873 960-994 1142- 1386- 1614- 2518- 2946- (STRAINSINGAPORE S275/90) 1179 1420 1648 2554 3016 PPOLG_DEN1W GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 1  74-108 833-874 961-995 1143- (STRAINWESTERN PACIFIC) 1180 PPOLG_DEN21 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(ISOLATE MALAYSIA M1) 448-492 PPOLG_DEN22 GENOME POLYPROTEIN DENGUEVIRUS TYPE 2 (ISOLATE MALAYSIA M2) 448-495 PPOLG_DEN26 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681)  74-108 728-777 961-9951146- 1246- 1418- 1615- 2517- 1180 1280 1452 1649 2551 PPOLG_DEN27GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53)  74-108728-777 961-995 1146- 1246- 1418- 1615- 2485- 1180 1280 1452 1649 2551PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN D2-04)728-777 PPOLG_DEN2H GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAINTH-36) 497-546 PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(STRAIN JAMAICA)  74-108 728-777 961-995 1146- 1246- 1418- 1615- 2517-1180 1280 1452 1649 2551 PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUSTYPE 2 (STRAIN NEW GUINEA C) 213-247 398-432 PPOLG_DEN2P GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1)  74-108 728-777832-875 961-995 1146- 1246- 1418- 1615- 1180 1280 1452 1649 PPOLG_DEN2TGENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 448-497552-595 681-715 866-900  966- 1205- 1000 1239 PPOLG_DEN2U GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PUO-218) 614-663 PPOLG_DEN3GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 830-872 959-993 1385- 2224- 2480-2704- 2940- 2980- 1419 2258 2521 2738 2978 3014 PPOLG_DEN4 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 4 957-993 1380- 2514- 2701- 2941- 2977-1414 2555 2735 2975 3011 PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11(STRAIN GREGORY) 213-259 1079- 1113 PPOLG_EMCV GENOME POLYPROTEINENCEPHALOMYOCARDITIS VIRUS 1074- 1472- 1522- 1665- 1789- 1115 1518 15701706 1823 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS145-179 1076- 1474- 1524- 1667- (STRAIN EMC-B NONDIABETO 1117 1520 15721708 PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 145-1791076- 1474- 1524- 1667- (STRAIN EMC-D-DIABETOGEN 1117 1520 1572 1708PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 145-179(STRAIN 37A) PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITISVIRUS  78-112 PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASEVIRUS 221-255 294-328 578-612 1103- 1493- 2165- (STRAIN A10-61) 11531528 2200 PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS220-254 293-327 577-611 1103- 1493- 2164- (STRAIN A12) 1164 1528 2199PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 221-2551103- 1493- 2164- (STRAINS O1K AND O1BFS) 1153 1528 2199 PPOLG_FMDVSGENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS  87-128 693-728 (STRAINC1-SANTA PAU [C-S PPOLG_FMDVT GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASEVIRUS 221-255 283-317 577-611 (STRAIN C1) PPOLG_HCV1 GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE 1) 364-398 PPOLG_HCVA GENOME POLYPROTEIN HOGCHOLERA VIRUS (STRAIN ALFORT) 440-493 626-660 695-729 1033- 1190- 1307-1779- 2136- 1070 1235 1343 1820 2170 2466- 2525- 2667- 3057- 3152- 3406-2500 2559 2708 3098 3193 3440 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERAVIRUS (STRAIN BRESCIA) 440-493 626-660 695-729 1033- 1173- 1779- 2136-2388- 1070 1235 1820 2170 2436 PPOLG_HCVBK 2466- 2525- 2667- 3057- 3152-3406- 3521- 2500 2559 2708 3098 3195 3440 3562 PPOLG_HCVE0 GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 357-398 2328- 2365 PPOLG_HCVHGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE EC10) 65-99 PPOLG_HCVH4GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 364-398 PPOLG_HCVH7GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-476) 364-398PPOLG_HCVH8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT27) 236-270PPOLG_HCVHK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCT18) 248-282PPOLG_HCVJ2 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-KF)357-398 PPOLG_HCVJ5 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J2)357-398 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J5)364-398 PPOLG_HCVJ7 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6)364-401 1716- 2082- 1750 2116 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE HC-J7) 364-398 PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE HC-J8) 364-398 1716- 2082- 2468- 2538- 1750 2116 25022572 PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE)357-405 2331- 2365 PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE HC-JT) 357-391 2331- 2365 PPOLG_HPAV2 GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE TAIWAN) 357-398 2328- 2444- 2365 2503PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A)  2-43101-135 203-237 870-904 1021- 1117- 1055 1151 PPOLG_HPAV8 GENOMEPOLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C)  2-43 101-135 203-237 870-9041021- 1117- 1055 1151 PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN 18F)  2-43 101-135 203-237 870-904 1021- 1117- 1055 1151PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326)  2-43101-135 203-237 PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAINGA76)  80-114 182-216 PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN HM-175)  2-43 101-135 203-237 870-904 1021- 1103- 1055 1151PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN LA)  2-43101-135 203-237 870-904 1021- 1103- 1055 1151 PPOLG_HPAVS GENOMEPOLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB)  2-43 101-135 203-237 870-9041021- 1103- 1055 1158 PPOLG_HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS AVIRUS  6-47 105-139 207-241 849-908 1025- 1115- 1158- (STRAIN AGM-27)1059 1155 1198 PPOLG_HRV14 GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS 2-43 101-135 203-237 (STRAIN CY-145) PPOLG_HRV1A GENOME POLYPROTEINHUMAN RHINOVIRUS 14 (HRV-14) 1020- 1393- 1479- 1877- 1054 1427 1513 1920PPOLG_HRV1B GENOME POLYPROTEIN HUMAN RHINOVIRUS 1A (HRV-1A) 362-396PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 387-421863-904 1133- 1168 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2(HRV-2) 856-897 1126- 1552- 1169 1593 PPOLG_HUEV7 GENOME POLYPROTEINHUMAN RHINOVIRUS 89 (HRV-89) 1566- 1607 PPOLG_IBDVO GENOME POLYPROTEINHUMAN ENTEROVIRUS 70 359-397 876-917 1032- 1403- 1896- (STRAIN J670/71)1088 1441 1934 PPOLG_JAEV1 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUSBURSAL DISEASE VIRUS 134-168 250-291 475-524 (STRAIN OH) PPOLG_JAEV5GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  74-122 211-256 539-576 980- 1409- 2463- 2739- 2782- (STRAIN SA-14) 1014 1450 2497 2777 28233322- 3387- 3359 3428 PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESEENCEPHALITIS VIRUS  74-122 211-256 539-576  980- 1409- 2463- 2739- 2782-(STRAIN SA(V)) 1014 1450 2497 2777 2823 3322- 3387- 3359 3428PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS  74-128211-256 539-576  980- 1409- 2463- 2739- 2782- (STRAIN JAOARS982) 10141450 2497 2777 2823 3322- 3387- 3359 3428 PPOLG_KUNJM GENOME POLYPROTEINJAPANESE ENCEPHALITIS VIRUS  7-48 138-183 467-504 908-942 1337- (STRAINNAKAYAMA) 1378 PPOLG_LANVT GENOME POLYPROTEIN KUNJIN VIRUS (STRAINMRM61C)  74-108 207-251 851-885 2464- 2528- 2740- 3325- 3389- 2498 25792778 3359 3423 PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 68-102 431-465 962-996 1431- 1932- 2536- 2967- 3003- 1472 1966 25913001 3037 3102- 3145 PPOLG_LIV GENOME POLYPROTEIN LANGAT VIRUS (STRAINYELANTSEV)  68-102 431-465 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILLVIRUS (LI)  68-123 231-272 431-465 PPOLG_MCFA GENOME POLYPROTEIN LOUPINGILL VIRUS (STRAIN SB 526) 151-185 PPOLG_MVEV GENOME POLYPROTEIN MOSQUITOCELL FUSING AGENT  80-114 908-942 2049- 2630- 3036- 3290- (CFAFLAVIVIRUS) 2087 2689 3095 3341 PPOLG_OMV GENOME POLYPROTEIN MURRAYVALLEY ENCEPHALITIS VIRUS  67-115 209-253 853-887  979- 1408- 1013 1449PPOLG_PEMVC GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 418-515 946-9841072- 1106 PPOLG_POL1M GENOME POLYPROTEIN PEPPER MOTTLE VIRUS(CALIFORNIA ISOLATE)  55-100 207-248 377-411 704-738 827-862 877-9471021- 1167- 1055 1201 1488- 1787- 1948- 2202- 2258- 2805- 3003- 15291821 1982 2236 2310 2839 3037 PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUSTYPE 1 (STRAIN MAHONEY)  9-43 1046- 1414- 1500- 1806- 1902- 1101 14481548 1840 1947 PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAINSABIN)  9-43 899-933 1047- 1415- 1501- 1610- 1808- 1904- 1102 1449 15491651 1842 1949 PPOLG_POL2W GENOME POLYPROTEIN POLIOVIRUS TYPE 2 (STRAINLANSING)  9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 14471547 1649 1840 1947 PPOLG_POL32 GENOME POLYPROTEIN POLIOVIRUS TYPE 2(STRAIN W-2)  9-43 897-831 1045- 1413- 1502- 1608- 1806- 1902- 1100 14471547 1649 1840 1947 PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3(STRAIN 23127)  9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 10981446 1546 1648 1839 1946 PPOLG_PPVD GENOME POLYPROTEIN POLIOVIRUS TYPE 3(STRAINS P3/LEON/  9-43 896-930 1044- 1412- 1498- 1607- 1805- 1901- 37AND P3/LEON 12A[1]B) 1099 1446 1546 1648 1839 1946 PPOLG_PPVEA GENOMEPOLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 164-208 441-503 728-769815-867 921-955 1741- 1782 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POXPOTYVIRUS (STRAIN EL AMAR) 116-157 784-818 1146- 1197 PPOLG_PPVRA GENOMEPOLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT) 164-208 403-437 440-502727-768 814-873 920-954 1740- 1781 PPOLG_PRSVH GENOME POLYPROTEIN PLUMPOX POTYVIRUS (STRAIN RANKOVIC) 164-208 403-437 440-502 727-768 814-866920-954 1740- 1781 PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 68-102 434-468 (STRAIN P/MUTANT HA) PPOLG_PRSVW GENOME POLYPROTEINPAPAYA RINGSPOT VIRUS 325-359 (STRAIN P/MUTANT HA 5-1) PPOLG_PSBMVGENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 325-359 (STRAIN W) PPOLG_PVYCGENOME POLYPROTEIN PEA SEED-BORNE MOSAIC (STRAIN DPD1) 253-315 355-389529-589 935-976  984- 1080- 1588- 1808- 1018 1177 1627 1860 1971- 2379-2712- 2870- 2015 2413 2746 2907 PPOLG_PVYHU GENOME POLYPROTEIN POTATOVIRUS Y (STRAIN C) 131-196 701-735 802-856 PPOLG_PVYN GENOME POLYPROTEINPOTATO VIRUS Y (STRAIN HUNGARIAN) 144-181 701-735 802-863 901-949 1401-1492- 1728- 1777- 1441 1526 1772 1818 2272- 2306 PPOLG_PVYO GENOMEPOLYPROTEIN POTATO VIRUS Y (STRAIN N) 140-196 211-245 701-735 802-8631401- 1492- 1728- 1777- 1441 1526 1772 1818 1929- 1970 PPOLG_PWVSEGENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 140-196 211-245 701-735802-856 PPOLG_PWVTB GENOME POLYPROTEIN PASSIONFRUIT WOODINESS VIRUS203-237 (STRAIN SEVERE) PPOLG_PYFV1 GENOME POLYPROTEIN PASSIONFRUITWOODINESS VIRUS 203-237 (STRAIN TIP BRIGHT) PPOLG_STEVM GENOMEPOLYPROTEIN PARSNIP YELLOW FLECK VIRUS (ISOLATE P-121) 194-228 1111-1379- 1858- 1950- 2703- 1172 1413 1899 1991 2737 PPOLG_SVDVH GENOMEPOLYPROTEIN ST. LOUIS ENCEPHALITIS VIRUS (STRAIN MS1-7) 106-143 673-707739-773  975- 1404- 1009 1438 PPOLG_SVDVU GENOME POLYPROTEIN SWINEVESICULAR DISEASE VIRUS 15-49 1024- 1779- 1890- (STRAIN H/3 ′76) 10701813 1924 PPOLG_TBEVS GENOME POLYPROTEIN SWINE VESICULAR DISEASE VIRUS15-49 1024- 1890- (STRAIN UKG/27/72) 1070 1924 PPOLG_TBEVW GENOMEPOLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS  68-140 231-272 431-465 1158-1431- 1929- 2182- 2535- (STRAIN SOFJIN) 1192 1472 1966 2216 2590 2965-3051- 3100- 2999 3092 3143 PPOLG_TEV GENOME POLYPROTEIN TICK-BORNEENCEPHALITIS VIRUS  68-140 231-272 431-465 1158- 1431- 1932- 2536- 2967-(WESTERN SUBTYPE) 1192 1492 1966 2591 3001 3003- 3053- 3102- 3037 30943145 PPOLG_TMEVB THEILER'S MURINE ENCEPHALOMYELITIS TOBACCO ETCH VIRUS 73-124 166-222 540-584 720-782 828-925 1148- 1416- 1494- VIRUS (S 11921460 1535 1668- 1747- 1792- 2395- 2787- 1702 1781 1826 2434 2821PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1306-1483- 1601- VIRUS (STRAIN BEAN 1340 1518 1635 PPOLG_TMEVG GENOMEPOLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS 1304- 1481- 1599- VIRUS(STRAIN DA) 1338 1516 1663 PPOLG_TUMV GENOME POLYPROTEIN THEILER'SMURINE ENCEPHALOMYELITIS 1306- 1483- 1601- VIRUS (STRAIN GDVII) 13401518 1635 PPOLG_TVMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 216-259314-362 494-528 768-839 1443- 1477 PPOLG_WMV2 GENOME POLYPROTEIN TOBACCOVEIN MOTTLING VIRUS 34-68 408-449 667-704 761-813 851-885  969- 1031-1643- 1017 1072 1677 1686- 2316- 2701- 2814- 1725 2374 2749 2848PPOLG_WNV GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II  68-105 202-236PPOLG_YEFV1 GENOME POLYPROTEIN WEST NILE VIRUS  74-108 207-251 847-881 973- 1413- 2461- 2525- 2737- 1007 1447 2495 2576 2775 3320- 3385- 33573426 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D)418-452 525-563 728-768 1388- 2231- 2477- 2958- 3097- 1444 2276 25652996 3143 PPOLG_YEFV8 GENOME POLYPROTEIN YELLOW FEVER VIRUS 418-452525-563 728-768 1388- 2231- 2477- 2958- 3097- (STRAIN PASTEUR 17D-204)1444 2276 2565 2996 3143 PPOLH_POL1M GENOME POLYPROTEIN YELLOW FEVERVIRUS  75-116 418-452 525-563 728-768 (STRAIN 1899/81) PPOLN_EEVVTGENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY)  9-43 1047- 1415-1501- 1610- 1808- 1904- 1102 1449 1549 1651 1842 1949 PPOLN_FCVC6NONSTRUCTURAL POLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 345-382898-932 1945- (STRAIN TRINIDAD 1979 PPOLN_FCVF9 NON-STRUCTURALPOLYPROTEIN FELINE CALICIVIRUS (STRAIN CFI/68 FIV) 510-544 PPOLN_HEVBUNON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN F9)  4-45 369-410 986- 1023- 1020 1061 PPOLN_HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS EVIRUS (STRAIN BURMA) 338-379 1139- 1177 PPOLN_HEVMY NON-STRUCTURALPOLYPROTEIN HEPATITIS E VIRUS (STRAIN MEXICO) 338-379 PPOLN_HEVPANON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN MYANMAR) 338-3791139- 1184 PPOLN_MIDDV NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS(STRAIN PAKISTAN) 337-378 1138- 1176 PPOLN_ONNVG NONSTRUCTURALPOLYPROTEIN MIDDELBURG VIRUS 922-977 PPOLN_RHDV NONSTRUCTURALPOLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 899-933 1942- 2444- 19862502 PPOLN_RRVN NON-STRUCTURAL POLYPROTEIN RABBIT HEMORRHAGIC DISEASEVIRUS 188-234 306-347 409-457 1657- 1716 PPOLN_RRVT NONSTRUCTURALPOLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 895-929 1928- 2414- 19622467 PPOLN_RUBVT NONSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48)597-631 1083- 1136 PPOLN_SFV NONSTRUCTURAL POLYPROTEIN RUBELLA VIRUS(STRAIN THERIEN) 1506- 1551- 1730- 1862- 1540 1585 1767 1896 PPOLN_SINDONONSTRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1094- 2358- 1128 2392PPOLN_SINDV NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS 919-971 1491- 1961-2444- (SUBTYPE OCKELBO/STRAIN EDSBYN 82-5) 1525 1996 2478 PPOLR_EMPVNONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN HRSP) 1491- 1959- 2442-1525 1994 2476 PPOLS_EEEV RNA REPLICASE POLYPROTEIN EGGPLANT MOSAICVIRUS 899-933 1127- 1161 PPOLS_EEEV3 STRUCTURAL POLYPROTEIN EASTERNEQUINE ENCEPHALITIS VIRUS 372-406 914-951 PPOLS_EEVV8 STRUCTURALPOLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 373-407 915-952 (STRAINVA33[TEN BRO PPOLS_EEVVT STRUCTURAL POLYPROTEIN VENEZUELAN EQUINEENCEPHALITIS VIRUS 1216- (STRAIN TC-83) 1250 PPOLS_IBDV5 STRUCTURALPOLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1216- (STRAIN TRINIDAD1250 PPOLS_IBDVA STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASEVIRUS 134-168 231-286 470-523 (STRAIN 52/70) PPOLS_IBDVC STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286470-523 (STRAIN AUSTRALI PPOLS_IBDVE STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL DISEASE VIRUS 134-168 231-286 470-523 (STRAIN CU-1)PPOLS_IBDVP NONSTRUCTURAL PROTEIN VP4 AVIAN INFECTIOUS BURSAL DISEASEVIRUS 134-168 231-286 304-340 (STRAIN E) PPOLS_IBDVS STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 115-149 212-267451-504 (STRAIN PBG-98) PPOLS_IPNVJ STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL DISEASE VIRUS 134-168 249-283 470-523 (STRAIN STC)PPOLS_IPNVN STRUCTURAL POLYPROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 69-103 723-785 (SEROTYPE JASPER) PPOLS_ONNVG STRUCTURAL POLYPROTEININFECTIOUS PANCREATIC NECROSIS VIRUS 716-786 (STRAIN N1) PPOLS_RRV2STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU) 1204- 1238PPOLS_RRVN STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN 213970) 35-69PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092)369-403 939-973 PPOLS_RUBVH STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS(STRAIN T48) 939-973 PPOLS_RUBVR STRUCTURAL POLYPROTEIN RUBELLA VIRUS(VACCINE STRAIN HPV77)  999- 1036 PPOLS_RUBVT STRUCTURAL POLYPROTEINRUBELLA VIRUS (VACCINE STRAIN RA27/3)  999- 1036 PPOLS_SINDO STRUCTURALPOLYPROTEIN RUBELLA VIRUS (STRAIN THERIEN)  999- 1036 PPOLS_SINDVSTRUCTURAL POLYPROTEIN SINDBIS VIRUS 362-396 (SUBTYPE OCKELBO/STRAINEDSBYN 82-5) PPOLS_SINDW STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAINSHRSP AND HRLP) 362-396 PPOLS_WEEV STRUCTURAL POLYPROTEIN SINDBIS VIRUS34-68 (WILD TYPE SB DERIVED FROM STRAIN AR339) PPOL_BAEVM STRUCTURALPOLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 913-947 PPOL_BLVAU POLPOLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 42-80 676-743 794-8321001- 1042 PPOL_BLVJ POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 625-673(AUSTRALIAN ISOLATE) PPOL_CAEVC POL POLYPROTEIN BOVINE LEUKEMIA VIRUS625-673 (JAPANESE ISOLATE BLV-1) PPOL_CAMVD POL POLYPROTEIN CAPRINEARTHRITIS ENCEPHALITIS VIRUS 879-934 (STRAIN CORK) PPOL_COYMV ENZYMATICPOLYPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 177-211 PPOL_EIAV9PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS  87-121 333-367447-498 838-876 896-930 1310- 1351 PPOL_EIAVC POL POLYPROTEIN EQUINEINFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE 1369) 1056 PPOL_EIAVY POLPOLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 513-566 1022- (CLONE CL22)1056 PPOL_FENV1 POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 512-5651021- (ISOLATE WYOMING) 1055 PPOL_FIVPE POL POLYPROTEIN FELINEENDOGENOUS VIRUS ECE1 533-600 623-659 858-899 PPOL_FIVSD POL POLYPROTEINFELINE IMMUNODEFICIENCY VIRUS 429-473 606-663 (ISOLATE PETALUMA)PPOL_FIVT2 POL POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS 428-473 606-642(ISOLATE SAN DIEGO) PPOL_FMVD POL POLYPROTEIN FELINE IMMUNODEFICIENCYVIRUS 428-472 595-662 (ISOLATE TM2) PPOL_FOAMV ENZYMATIC POLYPROTEINFIGWORT MOSAIC VIRUS (STRAIN DXS) 403-437 PPOL_GALV POL POLYPROTEINHUMAN SPUMARETROVIRUS (FOAMY VIRUS) 140-174 217-256 285-326 PPOL_HTL1APOL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 528-562 673-740 PPOL_HTL1C POLPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 670-711 (STRAIN ATK)PPOL_HV1A2 POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 670-711(CARIBBEAN ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 501-537 606-664 (ARV2/SF2 ISOLATE PPOL_HV1B5 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 639-676 (BH10ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1513-549 618-676 (BH5 ISOLATE) PPOL_HV1EL POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 513-549 618-676 (BRU ISOLATE) PPOL_HV1H2POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663 (ELIISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1501-537 606-664 (HXB2 ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 505-541 610-668 (JRCSF ISOLATE) PPOL_HV1MNPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 476-536 601-663 (MALISOLATE) PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1504-540 609-667 (MN ISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 501-537 627-664 (NEW YORK-5 ISOLPPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536626-663 (NDK ISOLATE) PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 501-537 606-664 (OYI ISOLATE) PPOL_HV1RH POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 513-549 693-676 (PV22 ISOLATE)PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536605-663 (RF/HAT ISOLATE) PPOL_HV1Z2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 500-536 601-663 (STRAIN UGANDAN PPOL_HV2BEPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 500-536 626-663(Z2/CDC-Z34 ISOLA PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 2 49-83 484-582 653-687 817-851 (ISOLATE BEN) PPOL_HV2D1 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 356-390 464-562 632-666(ISOLATE CAM2) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 502-600 671-705 (ISOLATE D194) PPOL_HV2G1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 376-410 484-526 529-577 653-687 (ISOLATED205,7) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2464-562 633-667 (ISOLATE GHANA-1) PPOL_HV2RO POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 44-78 356-390 464-529 633-667 (ISOLATENIH-Z) PPOL_HV2SB POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2357-391 465-563 634-668 (ISOLATE ROD) PPOL_HV2ST POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 46-80 473-562 633-667 (ISOLATE SBLISY)PPOL_IPHA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 484-518522-577 653-687 (ISOLATE ST) PPOL_JSRV PUTATIVE POL POLYPROTEIN HAMSTERINTRACISTERNAL A-PARTICLE 462-503 PPOL_MLVAK POL POLYPROTEIN SHEEPPULMONARY ADENOMATOSIS VIRUS 190-231 PPOL_MLVAV POL POLYPROTEIN AKRMURINE LEUKEMIA VIRUS 325-392 PPOL_MLVF5 POL POLYPROTEIN AKV MURINELEUKEMIA VIRUS 677-744 PPOL_MLVFF POL POLYPROTEIN FRIEND MURINE LEUKEMIAVIRUS 682-749 (ISOLATE 57) PPOL_MLVFP POL POLYPROTEIN FRIEND MURINELEUKEMIA VIRUS 682-749 (ISOLATE FB29) PPOL_MLVMO POL POLYPROTEIN FRIENDMURINE LEUKEMIA VIRUS 682-749 (ISOLATE PVC-211) PPOL_MLVRD POLPOLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 677-744 PPOL_MLVRK POLPOLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 677-744 PPOL_MPMV POLPOLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS  62-129 (STRAIN KAPLAN)PPOL_OMVVS POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 470-504 578-613PPOL_RSVP POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV) 470-505855-910 PPOL_RTBV POL POLYPROTEIN ROUS SARCOMA VIRUS (STRAIN PRAGUE C)646-684 PPOL_RTBVP POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS  7-44 59-96101-135 176-236 325-362 433-474 1005- 1405- 1039 1439 PPOL_SFV1POLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS  7-44 59-96 101-135 176-236325-362 433-474 1005- 1405- (ISOLATE PHILIPPINES) 1039 1439 PPOL_SFV3LPOL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 349-383 427-464 494-535PPOL_SIVA1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3)124-165 429-467 496-530 PPOL_S1VA2 POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 351-385 637-678 737-771 938-979 (AGM155 ISOLATE)PPOL_SIVAG POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 45-86 (AGM266ISOLATE) PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS477-516 642-683 742-783 (AGM3 ISOLATE) PPOL_SIVAT POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 175-209 476-515 641-700 942-983 1020- (ISOLATEAGM/CLONE GR1 1054 PPOL_SIVCZ POL POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 657-698 757-798 (TYO-1 ISOLATE) PPOL_SIVGB POL POLYPROTEINCHIMPANZEE IMMUNODEFICIENCY VIRUS 527-561 626-688 (S1V(CPZ)) PPOL_SIVM1POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  9-57 446-483 629-673793-827 912-946 (ISOLATE GB1) PPOL_SIVMK POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 485-519 654-688 (MM142-83 ISOLATE) PPOL_SIVS4 POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 485-519 654-688 (K6W ISOLATE)PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 448-482 617-651(F236/SMH4 ISOLATE) PPOL_SOCMV POL POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 451-485 620-654 (PBJ/BC13 ISOLATE) PPOL_SRV1 ENZYMATIC POLYPROTEINSOYBEAN CHLOROTIC MOTTLE VIRUS 247-295 372-416 PPOL_VILV POL POLYPROTEINSIMIAN RETROVIRUS SRV-1 470-504 578-613 PPOL_VILV1 POL POLYPROTEIN VISNALENTIVIRUS (STRAIN 1514) 489-524 874-929 PPOL_VILV2 POL POLYPROTEINVISNA LENTIVIRUS (STRAIN 1514/ 489-524 874-929 CLONE LV1-1KS1)PPP15_HCMVA POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 489-524874-929 CLONE LV1-1KS2) PPR73_MMTVB LARGE STRUCTURAL PHOSPHOPROTEINHUMAN CYTOMEGALOVIRUS (STRAIN AD169) 116-150 187-221 PP150 PPR73_MMTVCPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 152-200 PPR73_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 20-79 PPR7L_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 61-95 142-201PPR7R_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 145-204270-311 PPYHD_CPVBM PROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR)141-200 266-307 PPYHD_NPVAC POLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMICPOLYHEDROSIS 13-85 VIRUS PPYHD_NPVAS POLYHEDRIN AUTOGRAPHA CALIFORNICANUCLEAR 13-47 POLYHEDROSIS VIRUS PPYHD_NPVBM POLYHEDRIN AGROTIS SEGETUMNUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD_NPVBS POLYHEDRIN BOMBYX MORINUCLEAR POLYHEDROSIS VIRUS 12-54 PPYHD_NPVLD POLYHEDRIN BUZURASUPPRESSARIA NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVMB POLYHEDRINLYMANTRIA DISPAR MULTICAPSID NUCLEAR 14-48 POLYHEDROSIS V PPYHD_NPVOPPOLYHEDRIN MAMESTRA BRASSICAE NUCLEAR 14-48 POLYHEDROSIS VIRUSPPYHD_NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47POLYHEDROSIS VIRUS PPYHD_NPVPF POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLECAPSID 14-48 NUCLEAR POLYHED PPYHD_NPVSE POLYHEDRIN PANOLIS FLAMMEAMULTIPLE NUCLEOCAPSID 14-48 POLYHEDROSIS PPYHD_NPVSF POLYHEDRINSPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN PPYHD_NPVSLPOLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUSPRASK_MSVKI POLYHEDRIN SPODOPTERA LITTORALIS NUCLEAR 17-51 POLYHEDROSISVIRUS PREV_BIV27 TRANSFORMING PROTEIN 21 KIRSTEN MURINE SARCOMA VIRUS142-176 PREV_EIAV9 REV PROTEIN BOVINE IMMUNODEFICIENCY VIRUS  77-115(ISOLATE 127) PREV_EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS51-89 (CLONE 1369) PREV_EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS51-89 (CLONE CL22) PREV_HV112 REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 81-119 (ISOLATE WYOMING) PREV_HV1A2 REV PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 35-69 (CLONE 12) PREV_HV1B1 REV PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 32-69 (ARV2/SF2 ISOLATE PREV_HV1B8 REVPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (BH10 ISOLATE)PREV_HV1BN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 25-59 (BH8ISOLATE) PREV_HV1BR REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 122-59 (BRAIN ISOLATE) PREV_HV1EL REV PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 35-69 (BRU ISOLATE) PREV_HV1H2 REV PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 32-66 (ELI ISOLATE) PREV_HV1J3 REV PROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (HXB2 ISOLATE) PREV_HV1JR REVPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 29-63 (JH3 ISOLATE)PREV_HV1MA REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 31-66 (JRCSFISOLATE) PREV_HV1MN REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 131-66 (MAL ISOLATE) PREV_HV1OY REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 31-66 (MN ISOLATE) PREV_HV1PV REV PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 32-69 (OYI ISOLATE) PREV_HV1S3 REV PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 35-69 (PV22 ISOLATE) AN PREV_HV1SC REVPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 35-69 (SF33 ISOLATE)PREV_SIVA1 REV PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 32-69 (SCISOLATE) PREV_SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 26-77(AGM155 ISOLATE) PREV_SIVAI REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS26-77 (AGM3 ISOLATE) PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 29-77 (ISOLATE AGM/CLONE GR1 PREV_SIVCZ REV PROTEIN SIMIANIMMUNODEFICIENCY VIRUS 28-75 (TYO-1 ISOLATE) PREV_VILV REV PROTEINCHIMPANZEE IMMUNODEFICIENCY VIRUS 33-67 PRIR1_ASFM2 REV PROTEIN VISNALENTIVIRUS (STRAIN 1514) 21-62 PRIR1_EBV RIBONUCLEOSIDE-DIPHOSPHATEAFRICAN SWINE FEVER VIRUS  7-41  88-133 635-683 REDUCTASE LAR (ISOLATEMALAWI LIL 20/1) PRIR1_HCMVA RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARRVIRUS (STRAIN B95-8) 213-247 689-723 REDUCTASE LAR PRIR1_HSVEBRIBONUCLEOSIDE-DIPHOSPHATE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 632-668REDUCTASE LAR PRIR1_HSVSA RIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUSTYPE 1  76-110 REDUCTASE LAR (STRAIN AB4P) PRIR1_VACCCRIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUS SAIMIRI (STRAIN 11) 324-365REDUCTASE LAR PRIR1_VACCV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS(STRAIN COPENHAGEN) 367-402 REDUCTASE LAR PRIR1_VARVRIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 367-402 REDUCTASELAR PRIR1_VZVD RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 367-402REDUCTASE LAR PRIR2_EBV RIBONUCLEOSIDE-DIPHOSPHATE VARICELLA-ZOSTERVIRUS (STRAIN DUMAS) 223-257 REDUCTASE LAR PRIR2_HSVB3RIBONUCLEOSIDE-DIPHOSPHATE EPSTEIN-BARR VIRUS (STRAIN B95-8)  89-137REDUCTASE SMA PRIR2_HSVEB RIBONUCLEOSIDE-DIPHOSPHATE BOVINE HERPESVIRUSTYPE 1 (STRAIN 34) 101-135 REDUCTASE SMA PRIR2_HSVSARIBONUCLEOSIDE-DIPHOSPHATE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)106-140 REDUCTASE SMA PRIR2_SFVKA RIBONUCLEOSIDE-DIPHOSPHATE HERPESVIRUSSAIMIRI (STRAIN 11) 125-159 REDUCTASE SMA PRIR2_VACCCRIBONUCLEOSIDE-DIPHOSPHATE SHOPE FIBROMA VIRUS (STRAIN KASZA)  98-132REDUCTASE SMA PRIR2_VACCP RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS(STRAIN COPENHAGEN)  98-132 REDUCTASE SMA PRIR2_VACCVRIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN L-1VP)  98-132REDUCTASE SMA PRIR2_VARV RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS(STRAIN WR)  98-132 REDUCTASE SMA PRL1_HSV2H RIBONUCLEOSIDE-DIPHOSPHATEVARIOLA VIRUS  98-132 REDUCTASE SMA PRP94_VACCV NEUROVIRULENCE FACTORHERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 171-212 PRP94_VARVRNA-POLYMERASE-ASSOCIATED VACCINIA VIRUS (STRAIN WR), AND 116-150465-540 757-791 TRANSCRIPTION S (STRAIN COPENHAGEN PRPO1_VACCCRNA-POLYMERASE-ASSOCIATED VARIOLA VIRUS 41-75 116-150 465-540 757-791TRANSCRIPTION S PRPO1_VACCV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS(STRAIN COPENHAGEN) 243-291 622-656 754-791 954-988 1006- 147 KD POLYPE1057 PRPO1_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR)243-291 622-656 754-791 954-988 1024- 147 KD POLYPE 1058 PRPO2_CAPVKDNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 243-291 622-656 754-791954-988 1006- 147 KD POLYPE 1057 PRPO2_COWPX DNA-DIRECTED RNA POLYMERASECAPRIPOXVIRUS (STRAIN KS-1) 19-60 114-155 589-630 132 KD POLYPEPRPO2_VACCV DNA-DIRECTED RNA POLYMERASE COWPOX VIRUS 211-245 359-400833-874 132 KD POLYPE PRPO2_VARV DNA-DIRECTED RNA POLYMERASE VACCINIAVIRUS (STRAIN WR), 211-245 359-400 833-874 132 KD POLYPE AND (STRAINCOPENHAGEN) PRPO4_VACCC DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS211-245 359-400 833-874 132 KD POLYPE PRPO4_VACCV DNA-DIRECTED RNAPOLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN)  62-116 35 KD POLYPEPPRPO4_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR) 62-116 35 KD POLYPEP PRPO5_VACCC DNA-DIRECTED RNA POLYMERASE VARIOLAVIRUS  62-116 35 KD POLYPEP PRPO5_VACCV DNA-DIRECTED RNA POLYMERASEVACCINIA VIRUS (STRAIN COPENHAGEN)  1-71 30 KD POLYPEP PRPO5_VARVDNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR)  1-71 30 KDPOLYPEP PRPO6_VACCV DNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS  1-71 30KD POLYPEP PRPO6_VARV DNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAINWR), 25-59 22 KD POLYPEP AND (STRAIN COPENHAGEN) PRPO7_VACCVDNA-DIRECTED RNA POLYMERASE VARIOLA VIRUS 25-59 22 KD POLYPEP PRPO7_VARVDNA-DIRECTED RNA POLYMERASE VACCINIA VIRUS (STRAIN WR), 43-93 19 KDPOLYPEP AND (STRAIN COPENHAGEN) PRPOA_LELV DNA-DIRECTED RNA POLYMERASEVARIOLA VIRUS 43-93 19 KD POLYPEP PRPOL_EAV RNA-DIRECTED RNA POLYMERASELELYSTAD VIRUS 1533- 1721- 1958- 2109- 1567 1758 1992 2157 PRRP1_IAANNRNA-DIRECTED RNA POLYMERASE EQUINE ARTERITIS VIRUS 1083- 1477- 1633-1117 1518 1673 PRRP1_IABEI RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS171-242 279-313 SUBUNIT P1 (STRAIN A/ANN ARBOR/6/60) PRRP1_IADUNRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 350-391SUBUNIT P1 (STRAIN A/BEIJING/11/56) PRRP1_IAGU2 RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAINA/DUNEDIN/4/73) PRRP1_IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/GULL/MARYLAND/704/77)PRRP1_IAHTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242279-313 SUBUNIT P1 (STRAIN A/EQUINE/LONDON/1416/73) PRRP1_IAKIERNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1(STRAIN A/EQUINE/TENNESSEE/5/86) PRRP1_IAKOR RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/KIEV/59/79)PRRP1_IALE1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242279-313 SUBUNIT P1 (STRAIN A/KOREA/426/68) PRRP1_IALE2 RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAINA/LENINGRAD/134/57) PRRP1_IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/17/57)PRRP1_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242279-313 SUBUNIT P1 (STRAIN A/LENINGRAD/134/47/57) PRRP1_IAME8RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1(STRAIN A/MALLARD/NEW YORK/6750/78) PRRP1_IANT6 RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAINA/MEMPHIS/8/88) PRRP1_IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/NT/60/68) PRRP1_IASINRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1(STRAIN A/PUERTO RICO/8/34) PRRP1_IATKM RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SINGAPORE/1/57)PRRP1_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242279-313 SUBUNIT P1 (STRAIN A/TURKEY/MINNESOTA/833/80 PRRP1_IAWILRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1(STRAIN A/VICTORIA/3/75) PRRP1_IAWIS RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 168-242 279-313 SUBUNIT P1 (STRAIN A/WILSON-SMITH/33)PRRP1_IAZH3 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 168-242279-313 SUBUNIT P1 (STRAIN A/WISCONSIN/3523/88) PRRP1_IAZON RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS 187-242 279-313 SUBUNIT P1 (STRAINA/SWINE/HONG KONG/126/82) PRRP1_IAZTF RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 171-242 279-313 SUBUNIT P1 (STRAINA/SWINE/ONTARIO/2/81) PRRP1_INBAC RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS 171-242 279-313 SUBUNIT P1 (STRAIN A/SWINE/TENNESSEE/26/77)PRRP1_INBAD RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 208-249SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66) PRRP1_INBLE RNA-DIRECTED RNAPOLYMERASE INFLUENZA B VIRUS 208-249 SUBUNIT P1 (STRAIN B/ANN ARBOR/1/66[WILD-TYPE] PRRP1_INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS208-249 SUBUNIT P1 (STRAIN B/LEE/40) PRRP2_IAANN RNA-DIRECTED RNAPOLYMERASE INFLUENZA C VIRUS 305-384 648-686 707-752 SUBUNIT P1 (STRAINC/JJ/50) PRRP2_IADH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS110-144 177-218 SUBUNIT P2 (STRAIN A/ANN ARBOR/6/60) PRRP2_IAFPRRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2(STRAIN A/DUCK/HOKKAIDO/8/80) PRRP2_IAGU2 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/FOWL PLAGUEVIRUS/ROSTOCK PRRP2_IAHLO RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS110-144 177-218 SUBUNIT P2 (STRAIN A/GULL/MARYLAND/704/77) PRRP2_IAHTERNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2(STRAIN A/EQUINE/LONDON/1416/73) PRRP2_IAKOR RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAINA/EQUINE/TENNESSEE/5/86) PRRP2_IALE1 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/KOREA/426/68)PRRP2_IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144177-218 SUBUNIT P2 (STRAIN A/LENINGRAD/134/57) PRRP2_IAMAN RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAINA/LENINGRAD/134/17/57) PRRP2_IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/MALLARD/NEW YORK/6750/78)PRRP2_IAPI0 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144177-218 SUBUNIT P2 (STRAIN A/NT/60/68) PRRP2_IAPUE RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAINA/PINTAIL/ALBERTA/119/79) PRRP2_IARUD RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/PUERTO RICO/8/34)PRRP2_IASIN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144177-218 SUBUNIT P2 (STRAIN A/RUDDY TURNSTONE/NEW JERS PRRP2_IATKMRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2(STRAIN A/SINGAPORE/1/57) PRRP2_IAVI7 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAINA/TURKEY/MINNESOTA/833/80) PRRP2_IAWIL RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/VICTORIA/3/75)PRRP2_IAZH2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144177-218 SUBUNIT P2 (STRAIN A/WILSON-SMITH/33) PRRP2_IAZH3 RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAINA/SWINE/HONG KONG/81/78 PRRP2_IAZI1 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/HONGKONG/126/82 PRRP2_IAZTF RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS110-144 177-218 SUBUNIT P2 (STRAIN A/SWINE/IOWA/15/30 PRRP2_INBACRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 110-144 177-218 SUBUNIT P2(STRAIN A/SWINE/TENNESSEE/26/77) PRRP2_INBAD RNA-DIRECTED RNA POLYMERASEINFLUENZA B VIRUS 111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66[COLD-ADAPTE PRRP2_INBSI RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS111-196 349-390 SUBUNIT P2 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE])PRRP3_IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 111-196349-383 SUBUNIT P2 (STRAIN B/SINGAPORE/222/79) PRRP3_IABUD RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNITP3 (STRAIN A/ANN ARBOR/6/60) PRRP3_IACHI RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 518-567 707-755 SUBUNIT P3(STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IAFPR RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3(STRAIN A/CHILE/1/83) PRRP3_IAFPW RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUEVIRUS/ROSTOCK PRRP3_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/FOWL PLAGUEVIRUS/WEYBRID PRRP3_IAGUA RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/MARYLAND/704/77PRRP3_IAHK6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  7-41 363-402473-514 707-755 SUBUNIT P3 (STRAIN A/GULL/ASTRAKHAN/227/84 PRRP3_IAHLORNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514707-755 SUBUNIT P3 (STRAIN A/EQUINE/KENTUCKY/2/860) PRRP3_IAHPRRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514707-755 SUBUNIT P3 (STRAIN A/EQUINE/LONDON/1416/73) PRRP3_IAKIERNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514721-755 SUBUNIT P3 (STRAIN A/EQUINE/PRAGUE/1/56) PRRP3_IAKORRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514707-755 SUBUNIT P3 (STRAIN A/KIEV/59/79) PRRP3_IALEI RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3(STRAIN A/KOREA/426/68) PRRP3_IALE2 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/LENINGRAD/134/57) PRRP3_IALE3 RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/LENINGRAD/134/17/57) PRRP3_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/LENINGRAD/134/47/57) PRRP3_IAME8 RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MALLARD/NEWYORK/6750/78) PRRP3_IANT6 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 7-41 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/MEMPHIS/8/88)PRRP3_IAPUE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402473-514 707-755 SUBUNIT P3 (STRAIN A/NT/60/68) PRRP3_IARUD RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNITP3 (STRAIN A/PUERTO RICO/8/34) PRRP3_IASE2 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/RUDDY TURNSTONE/NEW JERSE PRRP3_IASIN RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/SEAL/MASSACHUSETTS/133/82) PRRP3_IATKM RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/SINGAPORE/1/57) PRRP3_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/TURKEY/MINNESOTA/833/80) PRRP3_IAWIL RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAINA/VICTORIA/3/75) PRRP3_IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS  1-42 363-402 473-514 707-755 SUBUNIT P3 (STRAIN A/WILSON-SMITH/33PRRP3_IAZTE RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  1-42 363-402473-514 707-755 SUBUNIT P3 (STRAIN A/SWINE/IOWA/15/30) PRRP3_INBACRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS  7-41 363-402 473-514707-755 SUBUNIT P3 (STRAIN A/SWINE/TENNESSEE/24/77 PRRP3_INBADRNA-DIRECTED RNA POLYMERASE INFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAINB/ANN ARBOR/1/66 [COLD-ADAPTE PRRP3_INCBE RNA-DIRECTED RNA POLYMERASEINFLUENZA B VIRUS 458-533 SUBUNIT P3 (STRAIN B/ANN ARBOR/1/66[WILD-TYPE]) PRRP3_INCJJ RNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS235-269 275-309 SUBUNIT P3 (STRAIN C/BERLIN/1/85) PRRP3_THOGVRNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS 235-269 275-316 SUBUNIT P3(STRAIN C/JJ/50) PRRPA_CVH22 RNA-DIRECTED RNA POLYMERASE THOGOTO VIRUS343-401 SUBUNIT P3 PRRPA_CVMJH RNA-DIRECTED RNA POLYMERASE HUMANCORONAVIRUS (STRAIN 229E) 358-392 495-571 1742- 1971- 3664- 3912- 17762008 3724 3946 PRRPB_BEV RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUSMHV (STRAIN JHM) 617-651 1364- 2769- 3586- 3821- 4075- 4319- 1398 28033620 3855 4121 4353 PRRPB_CVMA5 RNA-DIRECTED RNA POLYMERASE BERNE VIRUS20-64 617-651  943- 1009 PRRPB_CVMJH RNA-DIRECTED RNA POLYMERASE MURINECORONAVIRUS MHV (STRAIN A59) 1129- 1303- 1453- 1692- 2629- 1170 13371494 1726 2670 PRRPB_IBVB RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUSMHV (STRAIN JHM) 1129- 1303- 1453- 1690- 2627- 1170 1337 1494 1724 2668PRRPB_IBVK RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS499-550 650-695 1460- 1509- 2246- (STRAIN BEAUDETTE) 1494 1548 2287PRRPL_BTV10 RNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITISVIRUS 115-156 (STRAIN KB8523) PRRPL_BUNYW RNA-DIRECTED RNA POLYMERASEBLUETONGUE VIRUS 308-342 705-748 825-903 1021- 1114- (SEROTYPE10/ISOLATE USA) 1076 1201 PRRPL_CDVO RNA POLYMERASE BUNYAMWERA VIRUS 2-36  80-114 308-363 371-412 1704- 1802- 1889- 1741 1861 1935PRRPL_HANTV RNA POLYMERASE BETA SUBUNIT CANINE DISTEMPER VIRUS 20-54(STRAIN ONDERSTEPOORT) PRRPL_HRSVA RNA POLYMERASE HANTAAN VIRUS (STRAIN76-118)  98-139 174-208 372-431 557-591 655-696 731-783 905-949 1276-1310 1419- 1742- 1993- 1453 1776 2027 PRRPL_MABVM RNA POLYMERASE BETASUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  87-188 827-861 1131- 1185-1465- (STRAIN A2 1179 1220 1517 PRRPL_MABVP RNA-DIRECTED RNA POLYMERASEMARBURG VIRUS (STRAIN MUSOKE) 597-631 1046- 1490- 1804- 2029- 2194- 10921552 1838 2063 2266 PRRPL_MEASE RNA-DIRECTED RNA POLYMERASE MARBURGVIRUS (STRAIN POPP) 597-631 1046- 1490- 1092 1552 PRRPL_MUMPM RNAPOLYMERASE BETA SUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 197-231 790-824869-903 1064- 1283- 2121- 1109 1317 2155 PRRPL_NDVB RNA POLYMERASE BETASUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 164-214 220-254 267-304576-627 752-807 1231- 1447- 1487- 1286 1481 1531 1566- 2191- 1600 2225PRRPL_PI2HT RNA POLYMERASE BETA SUBUNIT NEWCASTLE DISEASE VIRUS 167-208230-295 1969- 2043- 2108- (STRAIN BEAUDETTE C/45) 2013 2077 2142PRRPL_PI3H4 RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS136-170 575-628 750-785 1226- 1316- 1417- 1564- 1687- (STRAIN TOSHIBA)1284 1357 1479 1630 1721 1901- 1955 PRRPL_PUUMH RNA POLYMERASE BETASUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 48-91 107-163 540-574 747-781 1064-1293- 1499- 1994- (STRAIN NIH 47885) 1129 1356 1536 2036 PRRPL_RABVPRNA-DIRECTED RNA POLYMERASE PUUMALA VIRUS (STRAIN HALLNAS B1)  98-132381-415 444-488 557-591 655-696 731-783 922-976 1119- 1153 1742- 1940-1993- 1776 1975 2032 PRRPL_RABVS RNA POLYMERASE BETA SUBUNIT RABIESVIRUS (STRAIN PV)  73-114 197-231 696-730 1174- 1522- 1584- 2068- 12221580 1618 2123 PRRPL_RDV RNA POLYMERASE BETA SUBUNIT RABIES VIRUS(STRAIN SAD B19)  73-114 197-231 696-730 749-783 1174- 1522- 1584- 12221580 2123 PRRPL_RVFVZ RNA-DIRECTED RNA POLYMERASE RICE DWARF VIRUS 17-61534-575 844-878 918-985 1037- 1071 PRRPL_SEND5 RNA-DIRECTED RNAPOLYMERASE RIFT VALLEY FEVER VIRUS (STRAIN ZH-548 M12) 398-439 641-678832-887 1081- 1653- 1819- 1115 1687 1870 PRRPL_SENDE RNA POLYMERASE BETASUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 309-343 540-600 612-656747-781 1064- 1239- 1499- 2000- 1119 1280 1536 2034 2146- 2216PRRPL_SENDZ RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS)129-163 360-420 432-476 567-601 884-939 1059- 1319- 1820- 1100 1356 18541966- 2036 PRRPL_SEOU8 RNA POLYMERASE BETA SUBUNIT SENDAI VIRUS (STRAINZ) 309-343 540-600 612-656 747-781 1064- 1239- 1499- 2000- 1119 12801536 2034 2146- 2216 PRRPL_SV5WR RNA-DIRECTED RNA POLYMERASE SEOUL VIRUS(STRAIN 80-39)  98-139 174-208 557-591 655-696 731-765 1742- 1947- 1993-1776 1981 2027 PRRPL_SYNV RNA POLYMERASE BETA SUBUNIT SIMIAN VIRUS 5(STRAIN 21004-WR) 547-627 747-781 1225- 1319- 1592- 1676- 2024- 12801353 1626 1715 2058 PRRPL_TSWVB RNA POLYMERASE BETA SUBUNIT SONCHUSYELLOW NET VIRUS 760-794 825-859  977- 1089- 1978- 2059- 1014 1137 20322107 PRRPL_UUK RNA-DIRECTED RNA POLYMERASE TOMATO SPOTTED WILT VIRUS 46-101 399-433 539-573 589-634 1119- 1195- 1321- 1538- (BRAZILIANISOLATE CPNH1/BR 1153 1236 1379 1572 1684- 1857- 2073- 2156- 2206- 2315-2378- 2809- 1725 1898 2127 2200 2247 2368 2419 2843 PRRPL_VSVJH RNAPOLYMERASE UUKUNIEMI VIRUS 127-183 282-323 836-874 1030- 1481- 2015-2061- 1071 1515 2049 2098 PRRPL_VSVJO RNA POLYMERASE BETA SUBUNITVESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1522- 1802- (SEROTYPENEW JERSEY/STRA 1567 1836 PRRPL_VSVSJ RNA POLYMERASE BETA SUBUNITVESICULAR STOMATITIS VIRUS 319-358 674-715 720-763 1802- (SEROTYPE NEWJERSEY/STRA 1836 PRRPO_ACLSV RNA POLYMERASE BETA SUBUNIT VESICULARSTOMATITIS VIRUS 674-715 720-763 1019- 1742- 2066- (STRAIN SAN JUAN)1074 1799 2107 PRRPO_BWYVF RNA-DIRECTED RNA POLYMERASE APPLE CHLOROTICLEAF SPOT VIRUS 228-262 557-596 916-950 1235- 1269 PRRPO_BYDV1 PUTATIVERNA-DIRECTED RNA BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 304-341POLYMERASE PRRPO_BYDVP PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARFVIRUS 234-285 POLYMERASE (ISOLATE MAV-PS1) PRRPO_BYDVR PUTATIVERNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS 234-285 POLYMERASE (ISOLATEPAV) PRRPO_CARMV PUTATIVE RNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS234-285 POLYMERASE (ISOLATE P-PAV) PRRPO_CGMVS PROBABLE RNA-DIRECTED RNACARNATION MOTTLE VIRUS  93-131 POLYMERASE PRRPO_IBDV5 PUTATIVERNA-DIRECTED RNA CUCUMBER GREEN MOTTLE MOSAIC VIRUS  7-41 387-428446-480 726-767 1445- POLYMERASE (WATERMELON STR 1479 PRRPO_IBDVAPUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 384-432446-484 POLYMERASE VIRUS (STRAIN 52/70) PRRPO_IPNVJ PUTATIVERNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASE 144-185 266-307 709-757771-809 POLYMERASE VIRUS (STRAIN AUSTRALI PRRPO_IPNVS PUTATIVERNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 268-407501-535 750-802 POLYMERASE (SEROTYPE JASPER) PRRPO_LYCVA PUTATIVERNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 147-181 366-407501-535 753-802 POLYMERASE (SEROTYPE SP) PRRPO_LYCVW RNA POLYMERASELYMPHOCYTIC CHORIOMENINGITIS VIRUS 301-346 805-886 926-960 1509- 2090-(STRAIN ARMSTRON 1543 2124 PRRPO_MCMV RNA POLYMERASE LYMPHOCYTICCHORIOMENINGITIS VIRUS 301-345 (STRAIN WE) PRRPO_PEAMV PROBABLERNA-DIRECTED RNA MAIZE CHLOROTIC MOTTLE VIRUS 181-215 697-731 POLYMERASEPRRPO_PLRV1 RNA-DIRECTED RNA POLYMERASE PEA ENATION MOSAIC VIRUS 321-358PRRPO_PLRVW PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS (STRAIN 1)336-373 423-457 POLYMERASE PRRPO_PPMVS PUTATIVE RNA-DIRECTED RNA POTATOLEAFROLL VIRUS 336-373 423-457 POLYMERASE (STRAIN WAGENINGEN)PRRPO_RCNMV PUTATIVE RNA-DIRECTED RNA PEPPER MILD MOTTLE VIRUS 321-362402-454 627-661 862-896 POLYMERASE (STRAIN SPAIN PRRPO_REOVD PUTATIVERNA-DIRECTED RNA REC CLOVER NECROTIC MOSAIC VIRUS 666-700 POLYMERASEPRRPO_REOVJ RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 3/STRAIN DEARING)310-361 PRRPO_REOVL RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE 2/STRAIND5/JONES) 310-344 PRRPO_ROTBR RNA-DIRECTED RNA POLYMERASE REOVIRUS (TYPE1/STRAIN LANG) 310-361 PRRPO_ROTBU RNA-DIRECTED RNA POLYMERASE BOVINEROTAVIRUS (STRAIN RF) 60-96 133-167 204-245 535-569 579-631 639-686690-724 771-805 SUBUNIT VP1 PRRPO_ROTPC RNA-DIRECTED RNA POLYMERASEBOVINE ROTAVIRUS (STRAIN UK) 60-96 133-167 204-245 535-569 579-631639-686 690-724 771-805 SUBUNIT VP1 PRRPO_ROTPG RNA-DIRECTED RNAPOLYMERASE PORCINE ROTAVIRUS  3-44 255-299 335-397 476-510 518-620  966-SUBUNIT VP1 (GROUP C/STRAIN COWDEN) 1007 PRRPO_ROTS1 RNA-DIRECTED RNAPOLYMERASE PORCINE ROTAVIRUS (STRAIN GOTTFRIED) 62-96 133-167 336-377581-631 636-686 690-724 771-842 SUBUNIT VP1 PRRPO_SBMV RNA-DIRECTED RNAPOLYMERASE SIMIAN 11 ROTAVIRUS (STRAIN SA11) 60-96 133-167 535-569579-631 639-686 690-724 771-805 SUBUNIT VP1 PRRPO_SCVLA PROBABLERNA-DIRECTED RNA SOUTHERN BEAN MOSAIC VIRUS 628-665 POLYMERASEPRRPO_TACV RNA-DIRECTED RNA POLYMERASE SACCHAROMYCES CEREVISIAE VIRUSL-A 100-134 147-191 PRRPO_TMGMV RNA POLYMERASE TACARIBE VIRUS 155-204220-278 375-416 484-518 891-925 1030- 1285- 1981- 1081 1319 2015PRRPO_TMV PUTATIVE RNA-DIRECTED RNA TOBACCO MILD GREEN MOSAIC VIRUS401-449 682-720 765-818 POLYMERASE (TMV STRAIN U2) PRRPO_TMVKR PUTATIVERNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (VULGARE)  3-37 401-453 665-699POLYMERASE PRRPO_TMVTO PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS(STRAIN KOREAN)  3-37 401-453 665-699 POLYMERASE PRRPO_TNVD PUTATIVERNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L)  3-37 401-453860-894 POLYMERASE PRRPP_BRSVA RNA-DIRECTED RNA POLYMERASE TOBACCONECROSIS VIRUS (STRAIN D) 102-144 PRRPP_CDVO RNA POLYMERASE ALPHASUBUNIT BOVINE RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (STRAINA51908) PRRPP_HRSV RNA POLYMERASE ALPHA SUBUNIT CANINE DISTEMPER VIRUS312-373 (STRAIN ONDERSTEPOORT) PRRPP_HRSV1 RNA POLYMERASE ALPHA SUBUNITHUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 PRRPP_HRSVA RNAPOLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158160-216 (SUBGROUP B/STRAI PRRPP_HRSVL RNA POLYMERASE ALPHA SUBUNIT HUMANRESPIRATORY SYNCYTIAL VIRUS  99-158 160-216 (STRAIN A2) PRRPP_MEASE RNAPOLYMERASE ALPHA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS  99-158160-216 (SUBGROUP A/STRAI PRRPP_MEASI RNA POLYMERASE ALPHA SUBUNITMEASLES VIRUS (STRAIN EDMONSTON) 315-374 460-495 PRRPP_MEASY RNAPOLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN IP-3-CA) 315-374 460-495PRRPP_MUMP1 RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAINYAMAGATA-1) 315-374 460-495 PRRPP_MUMPE RNA POLYMERASE ALPHA SUBUNITMUMPS VIRUS (STRAIN SBL-1) 149-183 213-275 PRRPP_MUMPM RNA POLYMERASEALPHA SUBUNIT MUMPS VIRUS (STRAIN ENDERS) 214-276 PRRPP_NDVA RNAPOLYMERASE ALPHA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 214-276PRRPP_NDVB RNA POLYMERASE ALPHA SUBUNIT NEWCASTLE DISEASE VIRUS 100-134(STRAIN AUSTRALIA-VICTORIA/32) PRRPP_PI1HB RNA POLYMERASE ALPHA SUBUNITNEWCASTLE DISEASE VIRUS 100-138 (STRAIN BEAUDETTE C/45) PRRPP_PI1HC RNAPOLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  80-114 313-364375-437 (STRAIN C35) PRRPP_PI1HD RNA POLYMERASE ALPHA SUBUNIT HUMANPARAINFLUENZA 1 VIRUS  80-114 313-364 375-437 (STRAIN C39) PRRPP_PI1HERNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 1 VIRUS  80-114 313-364375-437 (STRAIN CI-5/73) PRRPP_PI2H RNA POLYMERASE ALPHA SUBUNIT HUMANPARAINFLUENZA 1 VIRUS  66-114 237-271 313-364 375-437 (STRAIN CI-14/830)PRRPP_PI2HT RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS218-281 PRRPP_PI3B RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2VIRUS 218-281 (STRAIN TOSHIBA) PRRPP_PI3H4 RNA POLYMERASE ALPHA SUBUNITBOVINE PARAINFLUENZA 3 VIRUS  31-130 414-470 PRRPP_PI4HA RNA POLYMERASEALPHA SUBUNIT HUMAN PARAINFLUENZA 3 VIRUS 410-499 (STRAIN NIH 47885)PRRPP_PI4HB RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4A VIRUS 4-38 222-285 (STRAIN TOSHIBA) PRRPP_PIRYV RNA POLYMERASE ALPHA SUBUNITHUMAN PARAINFLUENZA 4B VIRUS 222-285 (STRAIN 68-333) PRRPP_RABVA RNAPOLYMERASE ALPHA SUBUNIT PIRY VIRUS 137-174 PRRPP_RABVC RNA POLYMERASEALPHA SUBUNIT RABIES VIRUS (STRAIN AVO1)  93-127 PRRPP_RABVE RNAPOLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN CVS-11)  93-127PRRPP_RABVP RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN ERA), AND(STRAIN PM)  93-127 PRRPP_RABVS RNA POLYMERASE ALPHA SUBUNIT RABIESVIRUS (STRAIN PV)  93-127 PRRPP_SEND5 RNA POLYMERASE ALPHA SUBUNITRABIES VIRUS (STRAIN SAD B19  93-127 PRRPP_SEND6 RNA POLYMERASE ALPHASUBUNIT SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 313-364 375-447 PRRPP_SENDFRNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN 6/94) 323-364 375-447PRRPP_SENDH RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN FUSHIMI)313-364 375-447 PRRPP_SENDZ RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS(STRAIN HARRIS) 313-364 375-447 PRRPP_SV5 RNA POLYMERASE ALPHA SUBUNITSENDAI VIRUS (STRAIN Z) 313-364 375-447 PRRPP_SYNV RNA POLYMERASE ALPHASUBUNIT SIMIAN VIRUS 5 (STRAIN W3) 205-278 PRRPP_VSVIG RNA POLYMERASEALPHA SUBUNIT SONCHUS YELLOW NET VIRUS 138-173 233-281 PRRPP_VSVIM RNAPOLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-43 (SEROTYPEINDIANA/STRAIN G PRRPP_VSVJM RNA POLYMERASE ALPHA SUBUNIT VESICULARSTOMATITIS VIRUS  3-43 (SEROTYPE INDIANA/STRAIN M PRRPP_VSVJO RNAPOLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-37 (SEROTYPE NEWJERSEY/STRA PRRPP_VSVSJ RNA POLYMERASE ALPHA SUBUNIT VESICULARSTOMATITIS VIRUS  3-37 (SEROTYPE NEW JERSEY/STRA PSPHR_AMEPV RNAPOLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS  3-43 (STRAIN SANJUAN) PSP12_VACCV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 223-264361-395 PSP12_VARV SERINE PROTEINASE INHIBITOR VACCINIA VIRUS (STRAINWR) 21-86 PSP13_VACCC SERINE PROTEINASE INHIBITOR 2 VARIOLA VIRUS 21-86PSP13_VACCV SERINE PROTEINASE INHIBITOR 3 VACCINIA VIRUS (STRAINCOPENHAGEN) 118-167 225-266 PSP13_VARV SERINE PROTEINASE INHIBITOR 3VACCINIA VIRUS (STRAIN WR) 118-167 225-266 PSPIA_VACCC SERINE PROTEINASEINHIBITOR 3 VARIOLA VIRUS 122-171 229-270 PT2C2_CHVP1 SERINE PROTEINASEINHIBITOR 2 VACCINIA VIRUS (STRAIN COPENHAGEN) 11-65 HOMOLOG FIRSTPTAA2_VACCV TYPE II RESTRICTION ENZYME CVIAII PARAMECIUM BURSARIACHLORELLA VIRUS 1 48-85 PTAG8_FOWPV TRANS-ACTIVATOR PROTEIN A2 VACCINIAVIRUS (STRAIN WR, COPENHAGEN,  95-133 173-207 AND VARIOLA VI PTAG8_VACCVTRANS-ACTIVATOR PROTEIN FP0 FOWLPOX VIRUS  3-51 PTAG8_VARVTRANS-ACTIVATOR PROTEIN GK1 VACCINIA VIRUS (STRAIN WR),  3-51 (STRAINCOPENHAGEN) PTALA_BFDV TRANS-ACTIVATOR PROTEIN GK1 VARIOLA VIRUS  3-51PTALA_POVBO LARGE T ANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-325464-498 PTALA_POVHA LARGE T ANTIGEN BOVINE POLYOMAVIRUS 303-337 495-537PTALA_POVJC LARGE T ANTIGEN HAMSTER POLYOMAVIRUS 464-501 587-621PTALA_POVLY LARGE T ANTIGEN POLYOMAVIRUS JC 153-187 589-623 PTALA_POVM3LARGE T ANTIGEN LYMPHOTROPIC POLYOMAVIRUS  3-41 206-258 437-478PTALA_POVMA LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 509-544PTALA_POVMC LARGE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 507-542PTAMI_POVHA LARGE T ANTIGEN MOUSE POLYOMAVIRUS 504-539 (STRAIN CRAWFORDSMALL-PLAQUE) PTAMI_POVM3 MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 339-378PTAMI_POVMA MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 211-245388-422 PTAMI_POVMC MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2)192-226 369-403 PTASM_POVBO MIDDLE T ANTIGEN MOUSE POLYOMAVIRUS 192-226369-403 (STRAIN CRAWFORD SMALL-PLAQUE) PTASM_POVLY SMALL T ANTIGENBOVINE POLYOMAVIRUS 41-85 PTATR_NPVAC SMALL T ANTIGEN LYMPHOTROPICPOLYOMAVIRUS  3-41 PTATR_NPVBM TRANS-ACTIVATING TRANSCRIPTIONALAUTOGRAPHA CALIFORNICA NUCLEAR 408-442  46-480 489-523 REGULATPOLYHEDROSIS VIRUS PTATR_NPVOP TRANS-ACTIVATING TRANSCRIPTIONAL BOMBYXMORI NUCLEAR POLYHEDROSIS 413-447 451-485 494-528 REGULAT VIRUSPTAT_SIVA1 TRANS-ACTIVATING TRANSCRIPTIONAL ORGYIA PSEUDOTSUGATAMULTICAPSID 391-455 511-554 REGULAT POLYHEDROSIS VIRUS PTAT_SIVAI TATPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS  73-109 (AGM155 ISOLATE) PTAT_VILVTAT PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 137-185 (ISOLATE AGM/CLONE GR1PTAT_VILV1 TRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS (STRAIN1514) 28-74 REGULAT PTAT_VILV2 TRANS-ACTIVATING TRANSCRIPTIONAL VISNALENTIVIRUS 40-74 REGULAT (STRAIN 1514/CLONE LV1-1KS1) PTCB_FLVTRANS-ACTIVATING TRANSCRIPTIONAL VISNA LENTIVIRUS 40-74 REGULAT (STRAIN1514/CLONE LV1-1KS2) PTEGP_HSV11 T-CELL RECEPTOR BETA CHAIN PRECURSORFELINE LEUKEMIA VIRUS 279-321 PTEGP_HSVEA TEGUMENT PHOSPHOPROTEIN US9HERPES SIMPLEX VIRUS 27-61 (TYPE 1/STRAIN 17) PTEGP_HSVEB NONSENSEPTEGP_HSVEK NONSENSE PTEGP_HSVSB NONSENSE PTEGU_EBV NONSENSE PTEGU_HCMVALARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 768-802 821-855938-972 1101- 1208- 1479- 1700- 1809- 1138 1242 1516 1753 1867 1870-1920- 3108- 1916 1954 3149 PTEGU_HSV11 PROBABLE LARGE TEGUMENT PROTEINHUMAN CYTOMEGALOVIRUS (STRAIN AD169) 34-71 215-249 543-581 700-738868-909 936-977 1004- 1163- 1038 1200 1237- 2200- 1296 2235 PTEGU_HSV6GLARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 731-765 801-842 1022- 1223-1275- 1315- 1520- 1609- (TYPE 1/STRAIN 17) 1059 1269 1309 1370 1531 16691673- 1749- 1820- 2670- 1714 1783 1854 2704 PTEGU_HSVEB LARGE TEGUMENTPROTEIN HERPES SIMPLEX VIRUS 30-71 224-262 567-608 712-757  951- 1091-1192- 1357- (TYPE 6/STRAIN GS) 1000 1181 1233 1400 PTEGU_HSVSA LARGETEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 560-597 635-683 794-848908-956 1108- 1155- 1399- 1487- (STRAIN AB4P) 1151 1246 1458 1549 1619-1661- 1702- 1806- 1947- 1657 1695 1736 1843 1981 PTEGU_VZVD PROBABLELARGE TEGUMENT PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 520-558 560-598615-652 672-710 777-822 846-898 948-986 1287- 1332 1434- 1502PTERM_ADE02 LARGE TEGUMENT PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)657-696 713-747 804-841 933-972 1117- 1415- 1528- 1572- 1158 1471 15621620 1633- 1719- 1945- 2727- 1705 1756 1986 2761 PTERM_ADE05 DNATERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2 490-572 PTERM_ADE07 DNATERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5 490-592 PTERM_ADE12 DNATERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 491-559 PTJUN_AVIS1 DNATERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 12 443-491 497-538 PTMAF_AVIS4TRANSFORMING PROTEIN JUN AVIAN SARCOMA VIRUS (STRAIN 17) 210-284PTOP1_SFVKA TRANSFORMING PROTEIN MAF AVIAN MUSCULOAPONEUROTIC 247-288295-340 FIBROSARCOMA VIRUS AS42 PTOP2_ASFB7 DNA TOPOISOMERASE SHOPEFIBROMA VIRUS (STRAIN KASZA) 127-183 269-310 PTOP2_ASFM2 DNATOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 146-180481-515 601-642 945-979 1038- 1123- 1093 1162 PTSIS_SMSAV DNATOPOISOMERASE II AFRICAN SWINE FEVER VIRUS 146-180 480-514 600-641902-936 944-978 1038- 1122- (ISOLATE MALAWI LIL 20/1) 1091 1161PTYSY_VZVD PDGF-RELATED TRANSFORMING SIMIAN SARCOMA VIRUS 16-71 PROTEINP28-SIS PUBIL_NPVOP THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAINDUMAS) 215-260 PUL01_HCMVA UBIQUITIN-LIKE PROTEIN ORGYIA PSEUDOTSUGATAMULTICAPSID 43-80 POLYHEDROSIS VIRUS PUL03_HSV11 HYPOTHETICAL PROTEINUL1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 169-203 PUL03_HSV2H PROTEIN UL3HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  94-128 PUL03_HSVEB PROTEIN UL3HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52)  92-126 PUL04_HSV11 GENE 60PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)  70-104 PUL06_EBVPROTEIN UL4 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 102-136 PUL06_HCMVAVIRION PROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 104-145 313-347376-410 PUL06_HSV11 HYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 216-250 PUL06_HSVEB VIRION PROTEIN UL6 HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 36-94 103-141 294-329 337-371 416-479PUL06_HSVSA VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAINAB4P)  62-170 357-413 448-503 PUL06_VZVD VIRION GENE 43 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11)  90-140 151-194 302-336 364-405PUL08_HCMVA VIRION GENE 54 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 87-131 350-409 704-738 PUL09_HSVEB HYPOTHETICAL PROTEIN UL8 HUMANCYTOMEGALOVIRUS (STRAIN AD169)  6-50 PUL09_VZVD ORIGIN OF REPLICATIONBINDING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 174-208PUL11_HCMVA ORIGIN OF REPLICATION BINDING PROTEIN VARICELLA-ZOSTER VIRUS(STRAIN DUMAS) 122-163 PUL13_HCMVA NONSENSE PUL14_HCMVA HYPOTHETICALPROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 47-81 185-227PUL14_HSVEB HYPOTHETICAL PROTEIN UL14 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 305-343 PUL14_PRVN3 HYPOTHETICAL GENE 48 PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN AB4P) 52-96 246-283 PUL14_VZVD UL14 PROTEINHOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3) 43-95 PUL16_HSVEB HYPOTHETICALGENE 46 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  61-103PUL17_HSV6U GENE 46 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)266-300 PUL21_HSVEB PROTEIN 10R HERPES SIMPLEX VIRUS 239-280 (TYPE6/STRAIN UGANDA-1102) PUL23_HCMVA GENE 40 PROTEIN EQUINE HERPESVIRUSTYPE 1 (STRAIN AB4P) 44-78 421-474 PUL24_HCMVA HYPOTHETICAL PROTEIN UL23HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 213-253 PUL24_ILTVT HYPOTHETICALPROTEIN UL24 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  5-39 PUL25_HCMVAPROTEIN UL24 HOMOLOG INFECTIOUS LARYNGOTRACHEITIS VIRUS 161-195 (STRAINTHORNE V88 PUL25_HSV11 HYPOTHETICAL PROTEIN UL25 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 255-341 351-399 PUL25_HSVEB VIRION PROTEIN UL25 HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 370-411 PUL25_HSVSA VIRION PROTEIN UL25EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 364-413 PUL25_ILTVT VIRION GENE19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-92 183-231 365-406PUL25_VZVD 64.1 KD VIRION PROTEIN INFECTIOUS LARYNGOTRACHEITIS VIRUS38-84 165-206 (STRAIN THORNE V88 PUL31_HCMVA VIRION GENE 34 PROTEINVARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 340-388 PUL31_HSVEB HYPOTHETICALPROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 244-285 PUL31_VZVDGENE 29 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 153-187PUL32_HSVEB GENE 27 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)163-197 PUL32_VZVD MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUSTYPE 1 342-376 (STRAIN AB4P) (STRAIN AB1) PUL33_HCMVA PROBABLE MAJORENVELOPE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  72-106 296-344GLYCOPROTEIN 26 PUL33_VZVD G-PROTEIN COUPLED RECEPTOR HUMANCYTOMEGALOVIRUS (STRAIN AD169)  94-135 309-352 HOMOLOG UL33 PUL34_EBVGENE 25 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 29-63 PUL34_HCMVABFRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 159-200 PUL34_HSV11HYPOTHETICAL PROTEIN UL34 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 113-147PUL35_HCMVA VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)187-221 PUL37_EBV HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 231-268 PUL37_HSV11 PROTEIN BOLF1 EPSTEIN-BARR VIRUS(STRAIN B95-8) 708-742 PUL37_HSVEB PROTEIN UL37 HERPES SIMPLEX VIRUS(TYPE 1/STRAIN 17) 853-891 PUL37_HSVSA GENE 23 PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN AB4P)  82-137 311-345 614-648 715-750 781-822PUL37_VZVD GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  6-65 682-741PUL38_HCMVA GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)719-753 786-827 PUL41_VZVD HYPOTHETICAL PROTEIN UL38 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 10-51 PUL42_HSV11 HOST SHUTOFF VIRIONPROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-366 PUL42_HSVEBDNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 134-168221-263 PUL43_HCMVA DNA-BINDING GENE 18 PROTEIN EQUINE HERPESVIRUS TYPE1 (STRAIN AB4P) 138-172 PUL43_HSVE4 HYPOTHETICAL PROTEIN UL43 HUMANCYTOMEGALOVIRUS (STRAIN AD169)  72-109 PUL43_VZVD MEMBRANE PROTEIN UL43HOMOLOG EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 27-68 PUL45_HSV1K GENE15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 312-363PUL45_HSV1M PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 96-137 PUL47_HCMVA PROTEIN UL45 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN MP) 96-137 PUL47_HSV11 PROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)114-165 448-485 745-856 PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 473-518 PUL47_HSVBP VIRION PROTEIN UL47 HERPESSIMPLEX VIRUS (TYPE 1/STRAIN F 473-518 PUL47_HSVE4 80.7 KD ALPHATRANS-INDUCING PROTEIN BOVINE HERPESVIRUS TYPE 1 (STRAIN P8-2) 561-612PUL47_HSVEB 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 4(STRAIN 1942) 183-246 582-620 825-866 PUL47_VZVD 97 KD ALPHATRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 219-253371-412 817-866 PUL50_HCMVA ALPHA TRANS-INDUCING FACTOR 91.8 KDVARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  84-135 156-209 664-701 PROTEINPUL51_HSV11 PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 155-189PUL51_HSVE4 PROTEIN UL51 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 118-169PUL51_HSVEB GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942)121-162 PUL51_VZVD GENE 8 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAINAB4P) 120-161 PUL52_EBV GENE 7 PROTEIN VARICELLA-ZOSTER VIRUS (STRAINDUMAS) 122-163 PUL52_HSV11 PROBABLE DNA REPLICATION EPSTEIN-BARR VIRUS(STRAIN B95-8) 188-255 PROTEIN BSLF1 PUL52_HSVEB DNA REPLICATION PROTEINUL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 189-223 PUL52_HSVSA DNAREPLICATION PROTEIN UL52 EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 141-182929-970 PUL52_VZVD PROBABLE DNA REPLICATION GENE 56 HERPESVIRUS SAIMIRI(STRAIN 11) 445-483 PROTEIN PUL53_HCMVA PROBABLE DNA REPLICATION GENE 6VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 301-342 PROTEIN PUL55_HSV2HPROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 12-48 PUL64_HCMVAPROTEIN UL55 HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52) 151-185PUL70_HCMVA HYPOTHETICAL PROTEIN UL64 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 32-73 PUL74_HCMVA PROBABLE DNA REPLICATION PROTEIN HUMANCYTOMEGALOVIRUS (STRAIN AD169) 39-99 UL70 PUL87_HSV6U HYPOTHETICALPROTEIN UL74 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 43-79 PUL87_HSVSAHYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 729-770 (TYPE 6/STRAINUGANDA-1102) PUL88_HCMVA HYPOTHETICAL GENE 24 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11) 366-400 582-616 PUL91_HSVSA HYPOTHETICAL PROTEINUL88 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 357-391 PUL92_EBV HYPOTHETICALGENE 30 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 24-58 PUL92_HCMVAHYPOTHETICAL PROTEIN BDLF4 EPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144188-222 PUL92_HSV6U HYPOTHETICAL PROTEIN UL92 HUMAN CYTOMEGALOVIRUS(STRAIN AD169)  79-116 PUL92_HSVSA HYPOTHETICAL PROTEIN 9R HERPESSIMPLEX VIRUS 101-145 174-216 (TYPE 6/STRAIN UGANDA-1102) PUL93_HCMVAHYPOTHETICAL GENE 31 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  88-122PUL95_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 23-57299-384 PUL95_HSV6U HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 34-71 259-293 PUL96_HCMVA HYPOTHETICAL PROTEIN 13R HERPESSIMPLEX VIRUS  73-151 233-270 (TYPE 6/STRAIN UGANDA-1102) PUL96_HSV6UHYPOTHETICAL PROTEIN UL96 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  51-103PUL96_HSVSA HYPOTHETICAL PROTEIN 14R HERPES SIMPLEX VIRUS  53-113 (TYPE6/STRAIN UGANDA-1102) PULA2_HCMVA HYPOTHETICAL GENE 35 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11)  45-100 PULA4_HCMVA HYPOTHETICAL PROTEINUL102 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  6-40 758-792 PULD0_HCMVAVIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  1-56 130-171330-364 439-492 541-575 PUNG_HSV11 HYPOTHETICAL PROTEIN UL130 HUMANCYTOMEGALOVIRUS (STRAIN AD169)  84-125 PUNG_HSV23 URACIL-DNA GLYCOSYLASEHERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 227-268 PUNG_HSV2H URACIL-DNAGLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 188-229 PUNG_HSVSAURACIL-DNA GLYCOSYLASE HERPES SIMPLEX VIRUS (TYPE 2/STRAIN HG52 148-189PUNG_SFVKA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI (STRAIN 11)135-176 PUS02_HSVEB URACIL-DNA GLYCOSYLASE SHOPE FIBROMA VIRUS (STRAINKASZA)  81-115 PUS02_HSVEK GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P)  79-120 PUS07_HCMVA US1 PROTEIN EQUINE HERPESVIRUS TYPE 1 86-120 (STRAIN KENTUCKY A) PUS11_HCMVA HYPOTHETICAL PROTEIN HXLF5  2-36PUS14_HCMVA HYPOTHETICAL PROTEIN HXLF1 HUMAN CYTOMEGALOVIRUS (STRAINAD169) PUS18_HCMVA HYPOTHETICAL PROTEIN HVLF4 HUMAN CYTOMEGALOVIRUS(STRAIN AD169)  3-51 PUS23_HCMVA MEMBRANE PROTEIN HWLF5 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 187-225 PUS24_HCMVA HYPOTHETICAL PROTEINHHLF7 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-335 535-578 PUS26_HCMVAHYPOTHETICAL PROTEIN HHLF6 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-172PUS27_HCMVA HYPOTHETICAL PROTEIN HHLF5 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 535-584 PUS30_HCMVA G-PROTEIN COUPLED RECEPTOR HUMANCYTOMEGALOVIRUS (STRAIN AD169)  6-40 HOMOLOG US27 PV125_AMVLEHYPOTHETICAL PROTEIN HHRF5 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 135-169274-312 PV143_NPVAC 125 KD PROTEIN ALFALFA MOSAIC VIRUS 18-52 326-367591-649 (STRAIN 425/ISOLATE LEIDEN PV16K_TRVPS HELICASE AUTOGRAPHACALIFORNICA NUCLEAR 313-350 1114- 1179- POLYHEDROSIS VIRUS 1150 1213PV16K_TRVSY 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG)  75-117PV1A_BBMV 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN SYM)  75-117PV1A_BMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 21-55 349-405 492-526710-751 837-884 890-924 PV1A_CCMV 1A PROTEIN BROME MOSAIC VIRUS  4-66348-411 PV1A_CMVFN 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS  4-53242-276 348-389 487-526 PV1A_CMVO 1A PROTEIN CUCUMBER MOSAIC VIRUS(STRAIN FNY) 11-66 393-434 584-619 868-916 PV1A_CMVQ 1A PROTEIN CUCUMBERMOSAIC VIRUS (STRAIN O) 11-66 393-434 584-619 868-916 PV1A_PSVJ 1APROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 11-66 393-434 PV1A_TAV 1APROTEIN PEANUT STUNT VIRUS (STRAIN J)  4-66 PV23K_HSVTH 1A PROTEINTOMATO ASPERMY VIRUS 11-59 392-433 857-923 PV24K_BDV 23.5 KD PROTEINTURKEY HERPESVIRUS (STRAIN H2) 177-211 PV25K_NPVAC 24 KD ANTIGEN BORNADISEASE VIRUS  63-121 130-171 PV28K_PLRV1 25 KD PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR  4-50 POLYHEDROSIS VIRUS PV28K_PLRVW 28 KD PROTEINPOTATO LEAFROLL VIRUS (STRAIN 1) 116-150 PV290_ASFL5 28 KD PROTEINPOTATO LEAFROLL VIRUS 116-150 (STRAIN WAGENINGEN) PV29K_PEBV LIS 290PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 138-183 PV29K_TRVSY29.6 KD PROTEIN EARLY BROWNING VIRUS 115-192 PV29K_TRVTC 29 KD PROTEINTOBACCO RATTLE VIRUS 167-201 (STRAIN SYM), AND (STRAIN PSG) PV2A_CCMV 29KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 45-79 PV2A_CMVFN 2A PROTEINCOWPEA CHLOROTIC MOTTLE VIRUS 768-806 PV2A_PSVJ 2A PROTEIN CUCUMBERMOSAIC VIRUS (STRAIN FNY) 386-420 PV2A_TAV 2A PROTEIN PEANUT STUNT VIRUS(STRAIN J) 717-751 PV30K_TRVTC 2A PROTEIN TOMATO ASPERMY VIRUS 722-756PV360_ASFB7 29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 105-218PV362_ASFB7 K′360 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 53-87151-192 PV363_ASFB7 K′362 PROTEIN AFRICAN SWINE FEVER VIRUS (STRAINBA71V)  54-102 161-212 290-324 PV3A_BMV D′363 PROTEIN AFRICAN SWINEFEVER VIRUS (STRAIN BA71V) 153-199 PV3A_CMVFN 3A PROTEIN BROME MOSAICVIRUS 11-45 PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY)215-255 PV3A_CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN M) 215-255PV3A_CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN O) 215-255PV51K_ACLSV 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y) 215-255PV51K_BWYVF 50.8 KD PROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS  72-106PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1)113-147 196-233 404-451 PV56K_PLRV1 51 KD PROTEIN BEET WESTERN YELLOWSVIRUS (ISOLATE GB1) 113-147 196-233 407-451 PV56K_PLRVW 56 KD PROTEINPOTATO LEAFROLL VIRUS (STRAIN 1) 47-81 438-472 PV58K_BSMV 56 KD PROTEINPOTATO LEAFROLL VIRUS 47-81 438-475 (STRAIN WAGENINGEN) PV66K_BWYVF 58KD PROTEIN BARLEY STRIPE MOSAIC VIRUS 128-162 323-371 PV70K_PLRV1 66.2KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 480-521 PV70K_PLRVW69.7 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1)  98-144 514-548PV90K_AMVLE 69.7 KD PROTEIN POTATO LEAFROLL VIRUS  98-144 409-443514-548 (STRAIN WAGENINGEN) PVA04_VACCC 90 KD PROTEIN ALFALFA MOSAICVIRUS 107-141 (STRAIN 425/ISOLATE LEIDEN) PVA04_VACCV PROTEIN A4VACCINIA VIRUS (STRAIN COPENHAGEN) 32-66 231-275 PVA04_VARV PROTEIN A4VACCINIA VIRUS (STRAIN WR) 32-66 231-275 PVA06_VACCC PROTEIN A4 VARIOLAVIRUS 22-66 210-265 PVA06_VACCV PROTEIN A6 VACCINIA VIRUS (STRAINCOPENHAGEN)  97-213 314-355 PVA06_VARV PROTEIN A6 VACCINIA VIRUS (STRAINWR)  96-212 313-354 PVA08_VACCC PROTEIN A6 VARIOLA VIRUS  97-213 313-358PVA08_VARV PROTEIN A8 VACCINIA VIRUS (STRAIN COPENHAGEN) 176-236PVA09_VACCC PROTEIN A8 VARIOLA VIRUS 176-236 PVA09_VARV PROTEIN A9VACCINIA VIRUS (STRAIN COPENHAGEN) 46-81 PVA11_VACCC PROTEIN A9 VARIOLAVIRUS 46-95 PVA11_VARV PROTEIN A11 VACCINIA VIRUS (STRAIN COPENHAGEN) 97-134 141-175 219-283 PVA12_VACCC PROTEIN A11 VARIOLA VIRUS  98-176220-284 PVA12_VARV PROTEIN A12 VACCINIA VIRUS (STRAIN COPENHAGEN)114-148 PVA18_VACCC PROTEIN A12 VARIOLA VIRUS 111-152 PVA18_VACCV 56 KDABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN 433-467PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAIN WR)307-341 433-467 PVA20_VACCC 56 KD ABORTIVE LATE PROTEIN VARIOLA VIRUS307-341 433-467 PVA20_VARV PROTEIN A20 VACCINIA VIRUS (STRAINCOPENHAGEN)  1-67 PVA22_VACCC PROTEIN A20 VARIOLA VIRUS  1-67 PVA22_VARVPROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-69 PVA23_VACCC PROTEINA22 VARIOLA VIRUS 39-80 PVA23_VARV PROTEIN A23 VACCINIA VIRUS (STRAINCOPENHAGEN)  95-143 173-207 255-289 344-382 PVA31_VARV PROTEIN A23VARIOLA VIRUS  95-143 173-207 255-289 344-382 PVA32_VACCV PROTEIN A31VARIOLA VIRUS  88-126 PVA32_VARV PROTEIN A32 VACCINIA VIRUS (STRAIN WR),AND (STRAIN COPENHAGEN PVA33_VARV PROTEIN A32 VARIOLA VIRUS 217-251PVA36_VACCV PROTEIN A33 VARIOLA VIRUS 63-97 PVA36_VARV PROTEIN A36PRECURSOR VACCINIA VIRUS 26-67 109-155 (STRAIN WR), AND (STRAINCOPENHAGEN) PVA37_VACCC PROTEIN A36 PRECURSOR VARIOLA VIRUS 26-67PVA37_VACCV PROTEIN A37 VACCINIA VIRUS (STRAIN COPENHAGEN) 24-65PVA38_VACCC PROTEIN A37 VACCINIA VIRUS (STRAIN WR) 24-65 PVA38_VACCVPROTEIN A38 VACCINIA VIRUS (STRAIN COPENHAGEN) 44-91 PVA38_VARV PROTEINA38 VACCINIA VIRUS (STRAIN WR) 44-91 PVA39_VACCC PROTEIN A38 VARIOLAVIRUS 44-91 PVA39_VACCV PROTEIN A39 VACCINIA VIRUS (STRAIN COPENHAGEN)37-71 PVA46_VACCC PROTEIN A39 VACCINIA VIRUS (STRAIN WR)  75-109PVA46_VACCV PROTEIN A46 VACCINIA VIRUS (STRAIN COPENHAGEN)  81-126PVA46_VARV PROTEIN A46 VACCINIA VIRUS (STRAIN WR)  81-126 PVA47_VACCCPROTEIN A46 VARIOLA VIRUS  81-126 PVA47_VACCV PROTEIN A47 VACCINIA VIRUS(STRAIN COPENHAGEN) 62-96 143-184 PVA47_VARV PROTEIN A47 VACCINIA VIRUS(STRAIN WR) 62-96 143-184 PVA49_VACCC PROTEIN A47 VARIOLA VIRUS 62-96143-184 PVA49_VACCV PROTEIN A49 VACCINIA VIRUS (STRAIN COPENHAGEN)  3-40126-160 PVA49_VARV PROTEIN A49 VACCINIA VIRUS (STRAIN WR)  3-40 126-160PVA52_VACCC PROTEIN A49 VARIOLA VIRUS  3-40 126-160 PVA52_VACCV PROTEINA52 VACCINIA VIRUS (STRAIN COPENHAGEN)  91-132 PVA57_VACCC PROTEIN A52VACCINIA VIRUS (STRAIN WR)  91-132 PVA57_VACCV GUANYLATE KINASE HOMOLOGVACCINIA VIRUS (STRAIN COPENHAGEN) 134-168 PVAL1_MSVK GUANYLATE KINASEHOMOLOG VACCINIA VIRUS (STRAIN WR) 134-168 PVAL1_MSVN AL1 PROTEIN MAIZESTREAK VIRUS (KENYAN ISOLATE) 230-269 PVAL1_MSVS AL1 PROTEIN MAIZESTREAK VIRUS (NIGERIAN ISOLATE) 228-262 PVAL1_SLCV AL1 PROTEIN MAIZESTREAK VIRUS 228-262 (SOUTH-AFRICAN ISOLATE) PVAL1_TYDVA AL1 PROTEINSQUASH LEAF CURL VIRUS 117-151 PVAL3_ABMVW AL1 PROTEIN TOBACCO YELLOWDWARF VIRUS 191-225 (STRAIN AUSTRALIA) PVAL3_BGMV AL3 PROTEIN ABUTILONMOSAIC VIRUS 44-78  83-124 (ISOLATE WEST INDIA) PVAL3_PYMVV AL3 PROTEINBEAN GOLDEN MOSAIC VIRUS 44-78  83-124 PVAL3_SLCV AL3 PROTEIN POTATOYELLOW MOSAIC VIRUS 30-78  87-121 (ISOLATE VENEZUELA) PVAL3_TGMV AL3PROTEIN SQUASH LEAF CURL VIRUS 46-80  91-125 PVAT_CAMVC AL3 PROTEINTOMATO GOLDEN MOSAIC VIRUS 44-78 PVAT_CAMVD APHID TRANSMISSION PROTEINCAULIFLOWER MOSAIC VIRUS 22-70  84-127 (STRAIN CM-1841) PVAT_CAMVE APHIDTRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 (STRAIN D/H)PVAT_CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70 93-127 (STRAIN BBC) PVAT_CAMVP APHID TRANSMISSION PROTEIN CAULIFLOWERMOSAIC VIRUS 22-70  93-127 (STRAIN NY8153) PVAT_CAMVS APHID TRANSMISSIONPROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-127 (STRAIN PV147) PVAT_CAMVWAPHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS 22-70  93-130(STRAIN STRASBOURG) PVAT_CERV APHID TRANSMISSION PROTEIN CAULIFLOWERMOSAIC VIRUS 36-70 (STRAIN W260) PVB03_VACCV APHID TRANSMISSION PROTEINCARNATION ETCHED RING VIRUS  99-138 PVB04_VACCC PROTEIN B3 VACCINIAVIRUS (STRAIN WR) 108-142 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAINCOPENHAGEN)  89-123 321-372 496-530 PVB04_VARV PROTEIN B4 VACCINIA VIRUS(STRAIN WR)  89-123 321-372 PVB05_VACC0 PROTEIN B4 VARIOLA VIRUS  89-123324-372 496-530 PVB05_VACCC PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIAVIRUS (STRAIN LC16MO) 254-298 PRECURSOR PVB05_VACCL PLAQUE-SIZE/HOSTRANGE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 254-298 PRECURSORPVB05_VACCV PLAQUE-SIZE/HOST RANGE PROTEIN VACCINIA VIRUS (STRAINLISTER) 254-298 PRECURSOR PVB07_VACCV PLAQUE-SIZE/HOST RANGE PROTEINVACCINIA VIRUS (STRAIN WR) 254-298 PRECURSOR PVB08_VACCC PROTEIN B7PRECURSOR VACCINIA VIRUS 28-62 (STRAIN WR), AND (STRAIN COPENHAGEN)PVB08_VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN)26-60 PVB18_VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAIN WR) 26-60PVB18_VACCV PROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375491-532 PVB18_VARV PROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375491-532 PVB19_VACCC PROTEIN B18 VACCINIA VIRUS 337-378 491-532PVB19_VACCD SURFACE ANTIGEN S PRECURSOR VACCINIA VIRUS (STRAINCOPENHAGEN)  87-121 PVB19_VACCV SURFACE ANTIGEN S PRECURSOR VACCINIAVIRUS (STRAIN DAIREN I)  85-119 PVB20_VACCC SURFACE ANTIGEN S PRECURSORVACCINIA VIRUS (STRAIN WR)  85-119 PVB21_VACCV PROTEIN B20 VACCINIAVIRUS (STRAIN COPENHAGEN) 48-85 PVBL1_BGMV PROTEIN B21 VACCINIA VIRUS(STRAIN WR) 61-95 PVBL1_SLCV BL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS159-193 PVBL1_TGMV BL1 PROTEIN SQUASH LEAF CURL VIRUS 159-193 PVBR1_BGMVBL1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 159-193 PVBR1_SLCV BR1 PROTEINBEAN GOLDEN MOSAIC VIRUS 172-206 PVBR1_TGMV BR1 PROTEIN SQUASH LEAF CURLVIRUS 20-61 PVC02_VACCC BR1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS 25-59PVC02_VACCV PROTEIN C2 VACCINIA VIRUS (STRAIN COPENHAGEN) 37-82 262-302391-442 PVC04_SFVKA PROTEIN C2 VACCINIA VIRUS (STRAIN WR) 37-82 262-302391-442 PVC04_VACCC PROTEIN C4 SHOPE FIBROMA VIRUS (STRAIN KASZA)175-223 374-408 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAINCOPENHAGEN) 12-46 PVC04_VARV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 12-46PVC05_SFVKA PROTEIN C4 VARIOLA VIRUS 12-46 PVC05_VACCC HYPOTHETICALPROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA)  82-125 PVC05_VACCVPROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 31-68 PVC05_VARV PROTEINC5 VACCINIA VIRUS (STRAIN WR) 31-68 PVC08_SFVKA PROTEIN C5 VARIOLA VIRUS32-70  73-121 PVC09_SFVKA HYPOTHETICAL PROTEIN C8 SHOPE FIBROMA VIRUS(STRAIN KASZA) 45-86 PVC09_VACCC HYPOTHETICAL PROTEIN C9 SHOPE FIBROMAVIRUS (STRAIN KASZA)  63-106 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS(STRAIN COPENHAGEN)  82-116 168-226 289-325 575-612 PVC10_VACCC PROTEINC9 VACCINIA VIRUS (STRAIN WR)  82-116 168-226 289-323 575-612PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180PVC10_VARV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-176 PVC12_SFVKAPROTEIN C10 VARIOLA VIRUS 136-170 PVC13_SFVKA HYPOTHETICAL PROTEIN C12SHOPE FIBROMA VIRUS (STRAIN KASZA)  2-36 PVC16_VACCC PROTEIN C13 SHOPEFIBROMA VIRUS (STRAIN KASZA)  3-66 137-182 189-240 PVC17_VACCC PROTEINC16/B22 VACCINIA VIRUS (STRAIN COPENHAGEN) 142-176 PVC18_VACCC PROTEINC17/B23 VACCINIA VIRUS (STRAIN COPENHAGEN) 100-155 325-359 PVC19_SFVKAPROTEIN C18/B24 VACCINIA VIRUS (STRAIN COPENHAGEN) 40-98 PVC19_VACCCPROTEIN C19 SHOPE FIBROMA VIRUS (STRAIN KASZA) 56-97 PVCAP_EBV PROTEINC19/B25 VACCINIA VIRUS (STRAIN COPENHAGEN) 218-252 PVCAP_HCMVA MAJORCAPSID PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 150-184 670-709PVCAP_HSV11 MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169)136-174 191-225 260-294 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 116-175 308-356 PVCAP_HSVEB MAJOR CAPSIDPROTEIN HERPES SIMPLEX VIRUS 136-174 230-266 311-382 PVCAP_HSVSA MAJORCAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 150-184 304-352PVCAP_PRVIS MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 479-520673-714 755-799 PVCAP_VZVD MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS(STRAIN INDIANA S) 105-160 292-326 PVCG3_NPVAC MAJOR CAPSID PROTEINVARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 128-198 316-350 PVD05_FOWP1DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 110-248 POLYHEDROSISVIRUS PVD05_VACCC 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 145-181PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-157PVD05_VARV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 123-157 PVD09_VACCCPROTEIN D5 VARIOLA VIRUS 123-157 PVD09_VACCV PROTEIN D9 VACCINIA VIRUS(STRAIN COPENHAGEN) 126-160 PVD09_VARV PROTEIN D9 VACCINIA VIRUS (STRAINWR) 126-160 PVD10_FOWP1 PROTEIN D9 VARIOLA VIRUS 126-160 PVD10_SFVKAPROTEIN D10 FOWLPOX VIRUS (STRAIN FP-1) 65-99 188-222 PVD10_VARV PROTEIND10 SHOPE FIBROMA VIRUS (STRAIN KASZA)  4-52 PVDBP_CAMVC PROTEIN D10VARIOLA VIRUS  67-105 PVDBP_CAMVD DNA-BINDING PROTEIN CAULIFLOWER MOSAICVIRUS (STRAIN CM-1841)  1-35 PVDBP_CAMVE DNA-BINDING PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN D/H)  1-35 PVDBP_CAMVN DNA-BINDING PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN BBC)  1-35 PVDBP_CAMVS DNA-BINDINGPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153)  1-35 PVE02_VACCCDNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS  1-35 (STRAIN STRASBOURG)PVE02_VACCV PROTEIN E2 VACCINIA VIRUS (STRAIN COPENHAGEN) 282-336PVE02_VARV PROTEIN E2 VACCINIA VIRUS (STRAIN WR) 282-336 PVE03_VACCCPROTEIN E2 VARIOLA VIRUS 282-336 PVE03_VACCV PROTEIN E3 VACCINIA VIRUS(STRAIN COPENHAGEN) 17-61 PVE03_VARV PROTEIN E3 VACCINIA VIRUS (STRAINWR) 17-61 PVE05_VACCC PROTEIN E3 VARIOLA VIRUS 17-61 PVE05_VACCD PROTEINE5 VACCINIA VIRUS (STRAIN COPENHAGEN) 28-93 PVE05_VACCV PROTEIN E5VACCINIA VIRUS (STRAIN DAIREN 1)  38-103 PVE05_VARV PROTEIN E5 VACCINIAVIRUS (STRAIN WR)  38-103 PVE06_VACCC PROTEIN E5 VARIOLA VIRUS  38-103PVE06_VACCV PROTEIN E6 VACCINIA VIRUS (STRAIN COPENHAGEN) 105-139232-266 PVE06_VARV PROTEIN E6 VACCINIA VIRUS (STRAIN WR) 105-139 232-266PVE18_NPVAC PROTEIN E6 VARIOLA VIRUS 105-139 367-401 PVE1_HPV1A EARLY18.5 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 112-163 POLYHEDROSISVIRUS PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 137-171PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 56-90 PVE1_HPV35 E1PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 33-67 133-167 PVE1_HPV39 E1 PROTEINHUMAN PAPILLOMAVIRUS TYPE 35 56-90 PVE1_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 59-96 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 41 55-89 312-346 PVE1_HPV58 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 4225-87 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 33-67 119-174PVE1_PAPVE E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 265-299 PVE26_NPVACE1 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 176-210 PVE2_CRPVK EARLY 25.9 KDPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  72-117 POLYHEDROSIS VIRUSPVE2_HPV05 PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE)  3-44PAPILLOMAVIRUS (STRAIN KANS PVE2_HPV08 PROBABLE E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5  5-57 276-310 342-383 437-471 PVE2_HPV16 PROBABLEE2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8  5-55 148-182 PVE2_HPV18 E2PROTEIN HUMAN PAPILLOMAVIRUS TYPE 16  61-105 315-349 PVE2_HPV1A E2PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18  65-100 PVE2_HPV2A E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A  3-37 159-193 PVE2_HPV31 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 2A 13-47 159-193 PVE2_HPV33 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 31  61-105 PVE2_HPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33  63-101 297-331 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35  62-106 158-192 PVE2_HPV41 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39  74-110 323-357 PVE2_HPV47 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41  6-54 PVE2_HPV51 E2 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 47  5-55 148-182 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51154-191 PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 13-47 179-213PVE2_HPV5B E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58  2-36 PVE2_PAPVDPROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  5-57 PVE2_PAPVEPROBABLE E2 PROTEIN DEER PAPILLOMAVIRUS 107-141 PVE2_PCPV1 PROBABLE E2PROTEIN EUROPEAN ELK PAPILLOMAVIRUS 113-150 PVE2_RHPV1 E2 PROTEIN PYGMYCHIMPANZEE PAPILLOMAVIRUS TYPE 1 318-361 PVE39_NPVAC E2 PROTEIN RHESUSPAPILLOMAVIRUS TYPE 1  62-106 307-341 PVE39_NPVOP EARLY 39 KD PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 20-57 POLYHEDROSIS VIRUS PVE4_HPV18 EARLY39 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 119-156 POLYHEDROSISVIRUS PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18 42-86PVE5_HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 63-97PVEF_GVTN PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  3-40  96-130PVENV_BEV VIRAL ENHANCING FACTOR (VEF) TRICHOPLUSIA NI GRANULOSIS VIRUS(TNGV) 681-719 (104 KD GLYCOP PVENV_DHVI1 ENVELOPE PROTEIN BERNE VIRUS(BEV) 195-229 PVENV_MCV1 ENVELOPE GLYCOPROTEIN PRECURSOR DHORI VIRUS(STRAIN INDIAN/1313/61) (DHO) 318-366 PVENV_MCV2 MAJOR ENVELOPE PROTEINMOLLUSCUM CONTAGIOSUM VIRUS SUBTYPE 1 252-286 (43 KD PROTEIN) (P43K(MCVI) PVENV_THOGV MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUSSUBTYPE 2 252-286 (43 KD PROTEIN) (P43K (MCVII) PVENV_VACCC ENVELOPEGLYCOPROTEIN PRECURSOR THOGOTO VIRUS (THO) 313-354 (SURFACE PVENV_VACCIMAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 257-295 (37 KDPROTEIN) (P37K PVENV_VACCP MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN1HD-J) 257-295 (37 KD PROTEIN) (P37K PVENV_VACCV MAJOR ENVELOPE PROTEINVACCINIA VIRUS (STRAIN L-IVP) 257-295 (37 KD PROTEIN) (P37K PVENV_VARVMAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAIN WR) 257-295 (37 KDPROTEIN) (P37K PVETS_NPVAC MAJOR ENVELOPE PROTEIN VARIOLA VIRUS 257-295(37 KD PROTEIN) (P37K PVF01_VACCC ECORI-T SITE PROTEIN ETS AUTOGRAPHACALIFORNICA NUCLEAR  1-53 POLYHEDROSIS VIRUS ( PVF01_VACCV PROTEIN F1VACCINIA VIRUS (STRAIN COPENHAGEN), 46-80 124-158 AND VACCINIA VIRUSPVF03_VACCC PROTEIN F1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR) 46-80124-158 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN) 71-110 PVF05_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN WR)  71-110PVF05_VACCP 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN)  81-129 282-320 PRECURSOR PVF05_VACCV 36 KD MAJOR MEMBRANEPROTEIN VACCINIA VIRUS (STRAIN L-IVP)  81-129 282-320 PRECURSORPVF05_VARV 36 KD MAJOR MEMBRANE PROTEIN VACCINIA VIRUS (STRAIN WR) 81-129 283-321 PRECURSOR PVF06_VARV 36 KD MAJOR MEMBRANE PROTEINVARIOLA VIRUS  81-122 281-322 PRECURSOR PVF11_VACCC PROTEIN F6 VARIOLAVIRUS  8-44 PVF11_VACCP PROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN)217-258 269-315 PVF11_VARV PROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP)213-254 265-311 PVF12_VACCC PROTEIN F11 VARIOLA VIRUS 41-75 269-315PVF12_VACCP PROTEIN F12 VACCINIA VIRUS (STRAIN COPENHAGEN)  1-67 102-143199-236 350-388 544-581 PVF12_VARV PROTEIN F12 VACCINIA VIRUS (STRAINL-IVP)  1-67 102-143 199-236 350-388 544-581 PVF16_VACCC PROTEIN F12VARIOLA VIRUS  1-67 199-236 350-388 547-581 PVF16_VACCP PROTEIN F16VACCINIA VIRUS (STRAIN COPENHAGEN) 155-194 PVF16_VARV PROTEIN F16VACCINIA VIRUS (STRAIN L-IVP) 155-194 PVFP3_FOWPV PROTEIN F16 VARIOLAVIRUS 155-194 PVFP4_FOWPV PROTEIN FP3 FOWLPOX VIRUS  1-43 PVFP7_FOWPVPROTEIN FP4 FOWLPOX VIRUS 139-173 239-273 PVFPL_FOWP1 PROTEIN FP7FOWLPOX VIRUS 23-57 PVFUS_VACCC FPLEET PROTEIN (FRAGMENT) FOWLPOX VIRUS(STRAIN FP-1)  77-111 PVFUS_VACCV 14 KD FUSION PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN) 30-64 PVG01_HSVI1 14 KD FUSION PROTEIN VACCINIAVIRUS (STRAIN WR) 30-64 PVG01_VACCC HYPOTHETICAL GENE 1 PROTEINICTALURID HERPESVIRUS 1 271-306 512-563 591-647 730-764 (CHANNEL CATFISHVIRUS) (CCV) PVG01_VACCV PROTEIN G1 VACCINIA VIRUS (STRAIN COPENHAGEN)301-339 PVG01_VARV PROTEIN G1 (FRAGMENT) VACCINIA VIRUS (STRAIN WR)240-278 PVG03_HSVEB PROTEIN G1 VARIOLA VIRUS 301-339 PVG03_HSVEK GENE 3PROTEIN EQUINE HERPESVIRUS TYPE 1 143-177 (STRAIN AB4P) (EHV-1)PVG03_VARV GENE 3 PROTEIN (ORF L1) EQUINE HERPESVIRUS TYPE 1 143-177(STRAIN KENTUCKY A) (EHV-1) PVG05_VACCC PROTEIN G3 VARIOLA VIRUS 64-98PVG05_VARV PROTEIN G5 VACCINIA VIRUS (STRAIN COPENHAGEN) 117-158 255-289355-389 PVG06_HSVI1 PROTEIN G5 VARIOLA VIRUS 117-158 255-289 355-389PVG07_HSVI1 HYPOTHETICAL GENE 6 MEMBRANE ICTALURID HERPESVIRUS 1  61-109PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG07_VACCC HYPOTHETICAL GENE 7MEMBRANE ICTALURID HERPESVIRUS 1  69-103 PROTEIN (CHANNEL CATFISH VIRUS)(CCV) PVG07_VARV PROTEIN G7 VACCINIA VIRUS (STRAIN COPENHAGEN) 114-175324-358 PVG09_VACCC PROTEIN G7 VARIOLA VIRUS 114-175 324-358 PVG09_VACCVPROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN COPENHAGEN) 304-338PVG09_VARV PROTEIN F1 (PROTEIN G9) VACCINIA VIRUS (STRAIN WR) 304-338(FRAGMENT) PVG10_HSVI1 PROTEIN F1 (PROTEIN G9) VARIOLA VIRUS 304-338PVG12_SPV1R HYPOTHETICAL GENE 10 MEMBRANE ICTALURID HERPESVIRUS 1 63-97PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG16_HSVSA GENE 12 PROTEINSPIROPLASMA VIRUS SPV1-R8A2 B 11-45 PVG17_HSVI1 HYPOTHETICAL GENE 16PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 58-95 PVG18_HSVI1 HYPOTHETICALGENE 17 PROTEIN ICTALURID HERPESVIRUS 1  92-129 177-211 (CHANNEL CATFISHVIRUS) (CCV) PVG1L_AMEPV HYPOTHETICAL GENE 18 PROTEIN ICTALURIDHERPESVIRUS 1 174-208 215-256 (CHANNEL CATFISH VIRUS) (CCV) PVG1_SPV1RG1L PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 407-441 PVG1_SPV4CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 136-170 256-297 320-357PVG22_HSVI1 CAPSID PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 287-321PVG24_HSVI1 HYPOTHETICAL GENE 22 PROTEIN ICTALURID HERPESVIRUS 1 117-158437-629 660-892 899- (CHANNEL CATFISH VIRUS) (CCV) 1055 PVG27_HSVI1HYPOTHETICAL GENE 24 PROTEIN ICTALURID HERPESVIRUS 1  7-72  74-108(CHANNEL CATFISH VIRUS) (CCV) PVG28_HSVI1 HYPOTHETICAL GENE 27 PROTEINICTALURID HERPESVIRUS 1 164-219 (CHANNEL CATFISH VIRUS) (CCV)PVG2R_AMEPV HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1 253-290(CHANNEL CATFISH VIRUS) (CCV) PVG2_SPV1R HYPOTHETICAL G2R PROTEINAMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 29-63 184-218 PVG2_SPV4 GENE 2PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 222-256 285-326 PVG33_HSVI1 GENE 2PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 255-310 PVG34_HSVI1 HYPOTHETICAL GENE33 PROTEIN ICTALURID HERPESVIRUS 1 149-183 (CHANNEL CATFISH VIRUS) (CCV)PVG35_HSVI1 HYPOTHETICAL GENE 34 PROTEIN ICTALURID HERPESVIRUS 1 345-379(CHANNEL CATFISH VIRUS) (CCV) PVG37_HSVI1 HYPOTHETICAL GENE 35 PROTEINICTALURID HERPESVIRUS 1 17-90 (CHANNEL CATFISH VIRUS) (CCV) PVG38_HSVI1HYPOTHETICAL GENE 37 PROTEIN ICTALURID HERPESVIRUS 1 435-472 (CHANNELCATFISH VIRUS) (CCV) PVG39_HSVI1 HYPOTHETICAL GENE 38 PROTEIN ICTALURIDHERPESVIRUS 1  84-118 (CHANNEL CATFISH VIRUS) (CCV) PVG3_SPV1RHYPOTHETICAL GENE 39 PROTEIN ICTALURID HERPESVIRUS 1 124-158 266-300(CHANNEL CATFISH VIRUS) (CCV) PVG3_SPV4 GENE 3 PROTEIN SPIROPLASMA VIRUSSPV1-R8A2 B  8-49 162-196 203-244 PVG43_HSVI1 GENE 3 PROTEIN SPIROPLASMAVIRUS 4 (SPV4)  6-54  87-121 PVG45_HSVSA HYPOTHETICAL GENE 43 PROTEINICTALURID HERPESVIRUS 1 116-150 262-296 324-361 643-677 (CHANNEL CATFISHVIRUS) (CCV) PVG46_HSVI1 HYPOTHETICAL GENE 45 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11) 121-162 PVG48_HSVI1 PROBABLE MAJOR GLYCOPROTEINICTALURID HERPESVIRUS 1 45-86 939- 1251- (CHANNEL CATFISH VIRUS) (CCV)1078 1321 PVG48_HSVSA HYPOTHETICAL GENE 48 PROTEIN ICTALURID HERPESVIRUS1 169-207 (CHANNEL CATFISH VIRUS) (CCV) PVG49_HSVSA HYPOTHETICAL GENE 48PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 360-417 611-666 733-767PVG4R_AMEPV HYPOTHETICAL GENE 49 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 68-102 PVG4_SPV4 G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV) 4-38 PVG51_HSVI1 GENE 4 PROTEIN SPIROPLASMA VIRUS 4 (SPV4)  89-130PVG51_HSVSA HYPOTHETICAL GENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-73 89-123 PROTEIN (CHANNEL CATFISH VIRUS) (CCV) PVG53_HSVI1 GENE 51GLYCOPROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 29-70 123-157 162-196PVG54_HSVI1 HYPOTHETICAL GENE 53 PROTEIN ICTALURID HERPESVIRUS 1  67-127(CHANNEL CATFISH VIRUS) (CCV) PVG55_HSVI1 HYPOTHETICAL GENE 54 PROTEINICTALURID HERPESVIRUS 1 355-396 (CHANNEL CATFISH VIRUS) (CCV)PVG55_HSVSA HYPOTHETICAL GENE 55 PROTEIN ICTALURID HERPESVIRUS 1 101-135(CHANNEL CATFISH VIRUS) (CCV) PVG56_HSVI1 HYPOTHETICAL GENE 55 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 126-178 PVG59_HSVI1 HYPOTHETICAL GENE 56PROTEIN ICTALURID HERPESVIRUS 1 151-192 578-612 644-678 750-784 846-8801111- (CHANNEL CATFISH VIRUS) (CCV) 1145 PVG59_HSVSA HYPOTHETICAL GENE59 MEMBRANE ICTALURID HERPESVIRUS 1 10-72  89-123 PROTEIN (CHANNELCATFISH VIRUS) (CCV) PVG5_SPV1R GENE 59 PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 169-209 PVG61_HSVI1 GENE 5 PROTEIN SPIROPLASMA VIRUSSPV1-R8A2 B  65-103 PVG63_HSVI1 HYPOTHETICAL GENE 61 PROTEIN ICTALURIDHERPESVIRUS 1 265-299 (CHANNEL CATFISH VIRUS) (CCV) PVG65_HSVI1HYPOTHETICAL GENE 63 PROTEIN ICTALURID HERPESVIRUS 1 546-584 (CHANNELCATFISH VIRUS) (CCV) PVG66_HSVI1 HYPOTHETICAL GENE 65 PROTEIN ICTALURIDHERPESVIRUS 1 805-839 1213- (CHANNEL CATFISH VIRUS) (CCV) 1254PVG67_HSVI1 HYPOTHETICAL GENE 66 PROTEIN ICTALURID HERPESVIRUS 1 154-188328-410 (CHANNEL CATFISH VIRUS) (CCV) PVG68_HSVI1 HYPOTHETICAL GENE 67PROTEIN ICTALURID HERPESVIRUS 1 379-413 501-546 1321- 1478- (CHANNELCATFISH VIRUS) (CCV) 1369 1541 PVG72_HSVI1 HYPOTHETICAL GENE 68 PROTEINICTALURID HERPESVIRUS 1 245-288 (CHANNEL CATFISH VIRUS) (CCV)PVG75_HSVI1 HYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1 447-484723-757 912-949 (CHANNEL CATFISH VIRUS) (CCV) PVG8_SPV1R HYPOTHETICALGENE 75 PROTEIN ICTALURID HERPESVIRUS 1 217-305 388-422 (CHANNEL CATFISHVIRUS) (CCV) PVGF1_1BVB GENE 8 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 5-51 PVGH3_HCMVA F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 142-1791233- 2119- 3388- 3475- 3517- 3761- (STRAIN BEAUDETTE) (I 1267 2156 34243513 3556 3795 PVGL1_CVPR8 GLYCOPROTEIN H301 PRECURSOR HUMANCYTOMEGALOVIRUS (STRAIN AD169) PVGL2_CVBF E1 GLYCOPROTEIN PRECURSORPORCINE RESPIRATORY CORONAVIRUS 212-257 (MATRIX GLYCOP (STRAIN86/137004/BRI PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN F15 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1088 1305PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN L9)850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305 PVGL2_CVBM E2 GLYCOPROTEINPRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138) 642-676 850-885  993- 1263-(SPIKE GLYCOPRO 1109 1305 PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINECORONAVIRUS (STRAIN MEBUS 642-676 850-885  993- 1263- (SPIKE GLYCOPRO1109 1305 PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN QUEBEC) 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAINVACCINE) 642-676 850-885  993- 1263- (SPIKE GLYCOPRO 1109 1305PVGL2_CVM4 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS (STRAIN 229E)770-916 1055- (SPIKE GLYCOPRO 1112 PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSORMURINE CORONAVIRUS MHV 643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN WILDTYPE 4) (MHV-4) 1117 1315 PVGL2_CVMJC E2 GLYCOPROTEIN PRECURSOR MURINECORONAVIRUS MHV 591-632  949- 1218- (SPIKE GLYCOPRO (STRAIN A59) 10791263 PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV643-684 1001- 1270- (SPIKE GLYCOPRO (STRAIN JHMV/VARIANT CL-2) 1117 1315PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV 503-543860-976 1129- (SPIKE GLYCOPRO (STRAIN JHM) 1174 PVGL2_CVPMI E2GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110448-482 692-733 889-923 1040- 1352- (SPIKE GLYCOPRO CORONAVIRUS (S 11861389 PVGL2_CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLEGASTROENTERITIS  69-110 448-482 692-733 889-923 1040- 1352- (SPIKEGLYCOPRO CORONAVIRUS (S 1186 1389 PVGL2_CVPPU E2 GLYCOPROTEIN PRECURSORPORCINE TRANSMISSIBLE GASTROENTERITIS  70-110 446-480 690-731 887-9211038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2_CVPR8 E2GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110446-480 690-731 887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 11841387 PVGL2_CVPRM E2 GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORYCORONAVIRUS 224-258 468-509 665-699 816-962 1128- (SPIKE GLYCOPRO(STRAIN 86/137004/BRIT 1165 PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSORPORCINE RESPIRATORY CORONAVIRUS 224-258 468-509 665-699 816-962 1128-(SPIKE GLYCOPRO (STRAIN RM4) (PRCV) 1165 PVGL2_EBV E2 GLYCOPROTEINPRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS  69-110 446-480 690-731887-921 1038- 1350- (SPIKE GLYCOPRO CORONAVIRUS (S 1184 1387 PVGL2_FIPVPROBABLE MEMBRANE GLYCOPROTEIN  68-102 PVGL2_IBV6 E2 GLYCOPROTEINPRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS 189-245 451-485 695-736892-926 1043- 1355- (STRAIN 79-1146) 1189 1392 PVGL2_IBVB E2GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 791-905 1057-(STRAIN 6/82) 1091 PVGL2_IBVD2 E2 GLYCOPROTEIN PRECURSOR AVIANINFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN BEAUDETTE)1090 PVGL2_IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITISVIRUS 773-905 1057- (STRAIN D274) 1091 PVGL2_IBVM E2 GLYCOPROTEINPRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056-(STRAIN KB8523) 1090 PVGLB_HCMVA E2 GLYCOPROTEIN PRECURSOR AVIANINFECTIOUS BRONCHITIS VIRUS 437-478 772-904 1056- (STRAIN M41) 1090PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAINAD169) 43-88 128-162 436-484 844-878 PVGLB_HSV11 GLYCOPROTEIN BPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 22-88 128-162 437-478451-485 845-879 PVGLB_HSV1F GLYCOPROTEIN B PRECURSOR HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 828-890 PVGLB_HSV1K GLYCOPROTEIN B PRECURSORHERPES SIMPLEX VIRUS (TYPE 1/STRAIN F)] 827-889 PVGLB_HSV1P GLYCOPROTEINB PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN KOS) 827-889 PVGLB_HSV23GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS 828-890 (TYPE 1/STRAINPATTON) PVGLB_HSV2H GLYCOPROTEIN B PRECURSOR HERPES SIMPLEX VIRUS (TYPE2/STRAIN 333) 828-890 PVGLB_HSV2S GLYCOPROTEIN B PRECURSOR HERPESSIMPLEX VIRUS (TYPE 2/STRAIN HG52) 828-890 PVGLB_HSV6U GLYCOPROTEIN BPRECURSOR HERPES SIMPLEX VIRUS (TYPE 2/STRAIN SA8) 817-871 PVGLB_HSVB1GLYCOPROTEIN B HERPES SIMPLEX VIRUS 37-71 185-223 (TYPE 6/STRAINUGANDA-1102) PVGLB_HSVB2 GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUSTYPE 1 859-913 PVGLB_HSVBC GLYCOPROTEIN B-1 PRECURSOR BOVINE HERPESVIRUSTYPE 2 (STRAIN BMV) 440-474 848-902 PVGLB_HSVE1 GLYCOPROTEIN 1 PRECURSORBOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER) 863-900 PVGLB_HSVE4GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A)542-576 911-961 PVGLB_HSVEA GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUSTYPE 4 (STRAIN 1942) 474-515 847-900 PVGLB_HSVEB GLYCOPROTEIN BPRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB1) 542-576 911-961PVGLB_HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAINAB4P) 542-576 911-961 PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR EQUINEHERPESVIRUS TYPE 1 542-576 910-960 (STRAIN KENTUCKY D) PVGLB_HSVSAGLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPESVIRUS 390-435 649-683787-845 (STRAIN RB-1B) PVGLB_MCMVS GLYCOPROTEIN B PRECURSOR HERPESVIRUSSAIMIRI (STRAIN 11) 240-288 406-447 PVGLB_PRVIF GLYCOPROTEIN B PRECURSORMURINE CYTOMEGALOVIRUS (STRAIN SMITH) 206-260 427-475 693-734 744-778860-894 PVGLB_VZVD GLYCOPROTEIN GII PRECURSOR PSEUDORABIES VIRUS 847-881(STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC_HSV11 GLYCOPROTEIN B PRECURSORVARICELLA-ZOSTER VIRUS (STRAIN DUMAS)  92-133 596-630 809-867PVGLC_HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN17) 469-510 PVGLC_HSV2 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS(TYPE 1/STRAIN KOS) 469-510 PVGLC_HSV23 GLYCOPROTEIN C PRECURSOR HERPESSIMPLEX VIRUS (TYPE 2) 442-476 PVGLC_HSVBC GLYCOPROTEIN C PRECURSORHERPES SIMPLEX VIRUS (TYPE 2/STRAIN 333) 443-477 PVGLC_HSVEBGLYCOPROTEIN GIII PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN COOPER)235-269 PVGLC_HSVMB GLYCOPROTEIN C PRECURSOR EQUINE HERPESVIRUS TYPE 1182-218 (STRAIN AB4P) AND (STRAIN KEN PVGLC_HSVMD SECRETORY GLYCOPROTEINGP57-65 MAREK'S DISEASE HERPESVIRUS 63-97 PRECURSOR (STRAIN BC-1)PVGLC_HSVMG SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS63-97 PRECURSOR (STRAIN RB-1B) PVGLC_HSVMM SECRETORY GLYCOPROTEINGP57-65 MAREK'S DISEASE HERPESVIRUS 62-96 PRECURSOR (STRAIN GA)PVGLC_PRVIF SECRETORY GLYCOPROTEIN GP57-65 MAREK'S DISEASE HERPESVIRUS63-97 PRECURSOR (STRAIN MD5) PVGLC_VZVD GLYCOPROTEIN G111 PRECURSORPSEUDORABIES VIRUS 183-235 (STRAIN INDIANA-FUNKHAUSER/BECKE PVGLC_VZVSGLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 280-321PVGLD_HSVEA GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT)280-321 PVGLD_HSVEB GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 89-123 (STRAIN AB1) PVGLD_HSVEK GLYCOPROTEIN D PRECURSOR EQUINEHERPESVIRUS TYPE 1 139-173 (STRAIN AB4P) AND (STRAIN KEN PVGLE_HSV11GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 139-173 (STRAINKENTUCKY A) PVGLE_HSV2 GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS(TYPE 1/STRAIN 17) 111-145 PVGLF_BRSVA GLYCOPROTEIN E PRECURSOR HERPESSIMPLEX VIRUS (TYPE 2) 111-159 PVGLF_BRSVC FUSION GLYCOPROTEIN PRECURSORBOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202 504-545 (STRAIN A51908)PVGLF_BRSVR FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIALVIRUS 146-202 267-302 506-547 (STRAIN COPENHAGE PVGLF_CDVO FUSIONGLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 146-202267-302 506-554 (STRAIN RB94) PVGLF_HRSV1 FUSION GLYCOPROTEIN PRECURSORCANINE DISTEMPER VIRUS 228-297 340-381 568-602 (STRAIN ONDERSTEPOORT)PVGLF_HRSVA FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIALVIRUS 116-203 267-302 506-549 (SUBGROUP B/STRAI PVGLF_HRSVL FUSIONGLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 116-202 267-302506-549 (STRAIN A2 PVGLF_HRSVR FUSION GLYCOPROTEIN PRECURSOR HUMANRESPIRATORY SYNCYTIAL VIRUS 116-202 267-302 506-547 (SUBGROUP A/STRAIPVGLF_MEASE FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIALVIRUS 116-202 267-302 506-549 (STRAIN RSS-2) PVGLF_MEASI FUSIONGLYCOPROTEIN PRECURSOR MEASLES VIRUS 116-184 228-269 452-500 (STRAINEDMONSTON) AND (STRAIN HALLE) PVGLF_MEASY FUSION GLYCOPROTEIN PRECURSORMEASLES VIRUS (STRAIN IP-3-CA) 119-187 231-272 455-503 PVGLF_MUMP1FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN YAMAGATA-1) 116-184228-269 452-500 PVGLF_MUMPM FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS(STRAIN SBL-1) 20-54 103-179 235-272 447-502 PVGLF_MUMPR FUSIONGLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN MIYAHARA VACCINE) 20-54103-179 235-272 447-502 PVGLF_MUMPS FUSION GLYCOPROTEIN PRECURSOR MUMPSVIRUS (STRAIN RW) 20-54 103-179 235-272 447-502 PVGLF_NDVA FUSIONGLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN SBL) 20-54 103-179 235-272447-502 PVGLF_NDVB FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS117-182 231-272 426-512 (STRAIN AUSTRALIA-VICTORIA/32) PVGLF_NDVH3FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 122-182 231-272426-517 (STRAIN BEAUDETTE C/45) PVGLF_NDVH4 FUSION GLYCOPROTEINPRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-517 (STRAINHER/33) PVGLF_NDVI FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS122-182 231-272 426-517 (STRAIN B1-HITCHNER/47) PVGLF_NDVL FUSIONGLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 133-182 238-272 426-517(STRAIN ITALIEN/45) PVGLF_NDVM FUSION GLYCOPROTEIN PRECURSOR NEWCASTLEDISEASE VIRUS 133-182 231-272 426-517 (STRAIN LAS/46) PVGLF_NDVQ FUSIONGLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272 426-512(STRAIN MIYADERA/51) PVGLF_NDVT FUSION GLYCOPROTEIN PRECURSOR NEWCASTLEDISEASE VIRUS 122-182 231-272 433-512 (STRAIN QUEENSLAND/66) PVGLF_NDVTGFUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS 117-182 231-272426-517 (STRAIN TEXAS) PVGLF_NDVU FUSION GLYCOPROTEIN PRECURSORNEWCASTLE DISEASE VIRUS 122-182 231-272 426-517 (STRAIN TEXAS G.B./48)PVGLF_PHODV FUSION GLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS122-182 231-272 426-512 (STRAIN ULSTER/67) PVGLF_PI1HC FUSIONGLYCOPROTEIN PRECURSOR PHOCINE DISTEMPER VIRUS 29-63 197-266 309-350533-581 PVGLF_PI2H FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 1VIRUS 123-174 207-267 459-503 (STRAIN C39) PVGLF_PI2HG FUSIONGLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS  93-183 477-528PVGLF_PI2HT FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 2 VIRUS 93-183 477-528 (STRAIN GREER) PVGLF_PI3B FUSION GLYCOPROTEIN PRECURSORHUMAN PARAINFLUENZA 2 VIRUS  93-185 477-528 (STRAIN TOSHIBA) PVGLF_PI3H4FUSION GLYCOPROTEIN PRECURSOR BOVINE PARAINFLUENZA 3 VIRUS 117-182207-241 456-518 PVGLF_RINDK FUSION GLYCOPROTEIN PRECURSOR HUMANPARAINFLUENZA 3 VIRUS 117-182 207-241 462-532 (STRAIN NIH 47885)PVGLF_RINDL FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS 112-180224-265 448-493 (STRAIN KABETE O) PVGLF_SEND5 FUSION GLYCOPROTEINPRECURSOR RINDERPEST VIRUS 112-180 224-265 448-506 (STRAIN L)PVGLF_SENDF FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z/HOSTMUTANTS) 127-188 211-271 463-533 PVGLF_SENDH FUSION GLYCOPROTEINPRECURSOR SENDAI VIRUS (STRAIN FUSHIMI) 127-188 211-271 463-533PVGLF_SENDJ FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN HARRIS)127-188 218-271 463-533 PVGLF_SENDZ FUSION GLYCOPROTEIN PRECURSOR SENDAIVIRUS (STRAIN HVJ) 127-188 211-271 463-533 PVGLF_SV41 FUSIONGLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z) 127-188 211-271 463-533PVGLF_SV5 FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS 41  96-186 454-508PVGLF_TRTV FUSION GLYCOPROTEIN PRECURSOR SIMIAN VIRUS 5 (STRAIN W3)103-171 241-275 451-487 PVGLG_BEFV FUSION GLYCOPROTEIN PRECURSOR TURKEYRHINOTRACHEITIS VIRUS ( 105-161 190-224 457-498 PVGLG_BRSVC SPIKEGLYCOPROTEIN PRECURSOR BOVINE EPHEMERAL FEVER VIRUS 506-612 PVGLG_HRSV1MAJOR SURFACE GLYCOPROTEIN G BOVINE RESPIRATORY SYNCYTIAL VIRUS 30-70104-138 (STRAIN COPENHAGE PVGLG_HRSV2 MAJOR SURFACE GLYCOPROTEIN G HUMANRESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG_HRSV3 MAJORSURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAINRSB642 PVGLG_HRSV4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORYSYNCYTIAL VIRUS 30-85 (STRAIN RSB1734 PVGLG_HRSV5 MAJOR SURFACEGLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS  30-107 (STRAINRSB5857) PVGLG_HRSV6 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORYSYNCYTIAL VIRUS 30-85 (STRAIN RSB6190) PVGLG_HRSV7 MAJOR SURFACEGLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-85 (STRAIN RSB6256)PVGLG_HRSV8 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIALVIRUS 30-85 (STRAIN RSB6614) PVGLG_HRSVA MAJOR SURFACE GLYCOPROTEIN GHUMAN RESPIRATORY SYNCYTIAL VIRUS 30-81 (SUBGROUP B/STRAI PVGLG_HRSVLMAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORY SYNCYTIAL VIRUS 30-67(STRAIN A2) PVGLG_HSVE4 MAJOR SURFACE GLYCOPROTEIN G HUMAN RESPIRATORYSYNCYTIAL VIRUS 25-85 (SUBGROUP A/STRAI PVGLG_SIGMA GLYCOPROTEIN GPRECURSOR EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942) 271-305 PVGLG_SYNVSPIKE GLYCOPROTEIN PRECURSOR SIGMA VIRUS 344-381 464-498 PVGLG_VHSV0SPIKE GLYCOPROTEIN PRECURSOR SONCHUS YELLOW NET VIRUS 488-523PVGLG_VSVIG SPIKE GLYCOPROTEIN PRECURSOR VIRAL HEMORRHAGIC SEPTICEMIAVIRUS 363-397 (STRAIN 07-71) PVGLH_EBV SPIKE GLYCOPROTEIN PRECURSORVESICULAR STOMATITIS VIRUS 476-510 (SEROTYPE INDIANA/STRAIN GPVGLH_HCMVA GLYCOPROTEIN GP85 PRECURSOR EPSTEIN-BARR VIRUS (STRAINB95-8) 53-87 160-201 336-380 653-694 PVGLH_HCMVT GLYCOPROTEIN HPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 103-137 270-311 693-741PVGLH_HSV11 GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAINTOWNE) 102-136 692-740 PVGLH_HSV1E GLYCOPROTEIN H PRECURSOR HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 447-481 PVGLH_HSV6G GLYCOPROTEIN HPRECURSOR HERPES SIMPLEX VIRUS (TYPE 1/STRAIN HFEM) 447-481 PVGLH_HSVBCGLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 357-406PVGLH_HSVE4 GLYCOPROTEIN H PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAINCOOPER) 364-416 PVGLH_HSVEB GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUSTYPE 4 (STRAIN 1942) 334-379 414-455 PVGLH_HSVSA GLYCOPROTEIN HPRECURSOR EQUINE HERPESVIRUS TYPE 1 327-372 407-448 (STRAIN AB4P) AND(ISOLATE HV PVGLH_MCMVS GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI(STRAIN 11) 32-66 374-453 664-712 PVGLH_PRVKA GLYCOPROTEIN H PRECURSORMURINE CYTOMEGALOVIRUS (STRAIN SMITH 440-474 PVGLH_PRVN3 GLYCOPROTEIN HPRECURSOR PSEUDORABIES VIRUS (STRAIN KAPLAN) 226-260 PVGLH_PRVRIGLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN NIA-3) 226-260PVGLH_VZVD GLYCOPROTEIN H PRECURSOR PSEUDORABIES VIRUS (STRAIN RICE)226-260 PVGLI_HCMVA PROBABLE GLYCOPROTEIN H PRECURSOR VARICELLA-ZOSTERVIRUS (STRAIN DUMAS) 455-506 PVGLM_BUNGE IMMEDIATE EARLY GLYCOPROTEINHUMAN CYTOMEGALOVIRUS (STRAIN AD169)  47-111 323-359 PRECURSORPVGLM_BUNL7 M POLYPROTEIN PRECURSOR BUNYAVIRUS GERMISTON 512-567 685-7371228- 1262 PVGLM_BUNSH M POLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE(ISOLATE L74) 643-677 916-950 PVGLM_BUNYW M POLYPROTEIN PRECURSORBUNYAVIRUS SNOWSHOW HARE 643-677 PVGLM_DUGBV M POLYPROTEIN PRECURSORBUNYAMWERA VIRUS 340-374 504-563 905-939 PVGLM_HANTB M POLYPROTEINPRECURSOR DUGBE VIRUS 937-989 1239- 1300 PVGLM_HANTH M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN B-1) 693-727 PVGLM_HANTL M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN HOJO)  72-106 PVGLM_HANTV M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN LEE)  72-106 PVGLM_INSV M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN 76-118)  72-106 PVGLM_PHV M POLYPROTEINPRECURSOR IMPATIENS NECROTIC SPOT VIRUS 1067- 1101 PVGLM_PTPV MPOLYPROTEIN PRECURSOR PROSPECT HILL VIRUS  73-111 PVGLM_SEOU8 MPOLYPROTEIN PRECURSOR PUNTA TORO PHLEBOVIRUS 149-251 PVGLM_SEOUR MPOLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 693-727 PVGLM_SEOUS MPOLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 694-728 PVGLN_BEFV MPOLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11) 693-730 PVGLP_BEVNONSTRUCTURAL GLYCOPROTEIN BOVINE EPHEMERAL FEVER VIRUS 377-414 513-569GNS PRECURSO PVGLX_PRVRI PEPLOMER GLYCOPROTEIN PRECURSOR BERNE VIRUS43-82  90-124 622-656 1128- 1236 PVGLY_JUNIN SECRETED GLYCOPROTEIN GXPSEUDORABIES VIRUS (STRAIN RICE) 420-461 PVGLY_LASSG GLYCOPROTEINPOLYPROTEIN PRECURSOR JUNIN ARENAVIRUS 301-349 PVGLY_LASSJ GLYCOPROTEINPOLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN GA391) 317-360 388-422PVGLY_LYCVA GLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAINJOSIAH) 318-361 389-423 PVGLY_LYCVW GLYCOPROTEIN POLYPROTEIN PRECURSORLYMPHOCYTIC CHORIOMENINGITIS VIRUS 333-367 395-432 (STRAIN ARMSTRONPVGLY_MOPEI GLYCOPROTEIN POLYPROTEIN PRECURSOR LYMPHOCYTICCHORIOMENINGITIS VIRUS 124-158 333-367 395-432 (STRAIN WE) PVGLY_PIARVGLYCOPROTEIN POLYPROTEIN PRECURSOR MOPEIA VIRUS 316-359 PVGLY_TACVGLYCOPROTEIN POLYPROTEIN PRECURSOR PICHINDE ARENAVIRUS 334-375PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS 315-363PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAINV5) 303-351 382-416 PVGLY_TACVT GLYCOPROTEIN POLYPROTEIN PRECURSORTACARIBE VIRUS (STRAIN V7) 302-350 381-415 PVGNB_CPMV GLYCOPROTEINPOLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN TRVL 11598) 303-351 382-416PVGNM_CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS 835-869 PVGNM_CPSMVGENOME POLYPROTEIN M COWPEA MOSAIC VIRUS 160-201 PVGNM_RCMV GENOMEPOLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS (STRAIN DG) 192-226 758-792874-915 PVGP8_EBV GENOME POLYPROTEIN M RED CLOVER MOTTLE VIRUS 837-871912-946 PVGP_EBOV PROBABLE MEMBRANE ANTIGEN GP85 EPSTEIN-BARR VIRUS(STRAIN B95-8)  94-149 PVGP_MABVM STRUCTURAL GLYCOPROTEIN PRECURSOREBOLA VIRUS 280-321 334-368 469-503 PVGP_MABVP STRUCTURAL GLYCOPROTEINPRECURSOR MARBURG VIRUS (STRAIN MUSOKE) 562-596 PVH02_VACCC STRUCTURALGLYCOPROTEIN PRECURSOR MARBURG VIRUS (STRAIN POPP) 562-596 PVH02_VACCVLATE PROTEIN H2 VACCINIA VIRUS (STRAIN COPENHAGEN) 58-92 PVH02_VARV LATEPROTEIN H2 VACCINIA VIRUS (STRAIN WR) 58-94 PVH05_VACCC LATE PROTEIN H2VARIOLA VIRUS 58-92 PVH05_VACCV PROTEIN H5 VACCINIA VIRUS (STRAINCOPENHAGEN) 118-185 PVH05_VARV PROTEIN H5 VACCINIA VIRUS (STRAIN WR)118-185 PVHEL_LSV PROTEIN H5 VARIOLA VIRUS 136-203 PVHRP_VACCC PROBABLEHELICASE LILY SYMPTOMLESS VIRUS 126-160 PVHRP_VACCV HOST RANGE PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN) 216-279 PVI03_VACCC HOST RANGEPROTEIN VACCINIA VIRUS (STRAIN WR) 216-279 PVI03_VACCV PROTEIN I3VACCINIA VIRUS (STRAIN COPENHAGEN) 150-193 210-244 PVI03_VARV PROTEIN I3VACCINIA VIRUS (STRAIN WR) 150-193 210-244 PVI06_VACCV PROTEIN I3VARIOLA VIRUS 150-193 210-244 PVI06_VARV PROTEIN I6 VACCINIA VIRUS(STRAIN WR) 58-92 PVI07_VARV PROTEIN I6 VARIOLA VIRUS 58-92 PVI08_VACCCPROTEIN I7 VARIOLA VIRUS 373-407 PVI08_VACCV PUTATIVE RNA HELICASE I8VACCINIA VIRUS (STRAIN COPENHAGEN) 548-589 PVI08_VARV PUTATIVE RNAHELICASE I8 VACCINIA VIRUS (STRAIN WR) 548-589 PVIE1_HCMVA PUTATIVE RNAHELICASE I8 VARIOLA VIRUS 548-589 PVIE1_HCMVT 55 KD IMMEDIATE-EARLYPROTEIN 1 HUMAN CYTOMEGALOVIRUS (STRAIN AD169)  78-112 171-205 368-402416-450 PVIE1_MCMVS 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMANCYTOMEGALOVIRUS (STRAIN TOWNE)  78-112 171-205 368-402 416-450PVIE2_NPVOP IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS (STRAINSMITH) 244-297 PVIEN_NPVAC IMMEDIATE-EARLY PROTEIN IE-2 ORGYIAPSEUDOTSUGATA MULTICAPSID  94-128 305-395 POLYHEDROSIS VIRUS PVIF_CAEVCIMMEDIATE-EARLY REGULATORY AUTOGRAPHA CALIFORNICA NUCLEAR 277-407PROTEIN IE-N POLYHEDROSIS VIRUS PVIF_FIVPE VIRION INFECTIVITY FACTORCAPRINE ARTHRITIS ENCEPHALITIS VIRUS 23-92 (STRAIN CORK) PVIF_FIVSDVIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCY VIRUS 53-94 (ISOLATEPETALUMA) PVIF_HV1A2 VIRION INFECTIVITY FACTOR FELINE IMMUNODEFICIENCYVIRUS 32-80 (ISOLATE SAN DIEGO) PVIF_HV1B1 VIRION INFECTIVITY FACTORHUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (ARV2/SF2 ISOLATEPVIF_HV1B5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (BH10, BRU, HXB2, PV PVIF_HV1EL VIRION INFECTIVITY FACTORHUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (BH5 ISOLATE) PVIF_HV1JRVIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-4262-96 (ELI ISOLATE) PVIF_HV1MA VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (JRCSF ISOLATE) PVIF_HV1MNVIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  2-36 (MALISOLATE) PVIF_HV1N5 VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  1-42 62-96 (MN ISOLATE) PVIF_HV1NA VIRION INFECTIVITYFACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (NEW YORK-5 ISOLPVIF_HVIND VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 1-42 62-96 (ISOLATE NIT-A) PVIF_HV1OY VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (NDK ISOLATE) PVIF_HV1RHVIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-4262-96 (OYI ISOLATE) PVIF_HV1U4 VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (RF/HAT ISOLATE) PVIF_HV1Z2VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-42(STRAIN UGANDAN PVIF_HV1Z6 VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1  1-42 62-96 (Z2/CDC-Z34 ISOLAT PVIF_HV2D2VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-4262-96 (ZAIRE 6 ISOLATE) PVIF_HV2NZ VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 2 147-195 (ISOLATE D205,7) PVIF_HV2RO VIRIONINFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 152-193 (ISOLATENIH-Z) PVIF_OMVVS VIRION INFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 163-197 (ISOLATE ROD) PVIF_SIVAI VIRION INFECTIVITY FACTOR OVINELENTIVIRUS (STRAIN SA-OMVV)  44-114 PVIF_SIVAG VIRION INFECTIVITY FACTORSIMIAN IMMUNODEFICIENCY VIRUS  2-58 150-202 (AGM155 ISOLATE) PVIF_SIVA1VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 17-58 (AGM3ISOLATE) PVIF_SIVAT VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCYVIRUS  2-36 143-187 (ISOLATE AGM/CLONE GR1 PVIF_SIVCZ VIRION INFECTIVITYFACTOR SIMIAN IMMUNODEFICIENCY VIRUS 20-58 150-195 (TYO-1 ISOLATE)PVIF_SIVGB VIRION INFECTIVITY FACTOR CHIMPANZEE IMMUNODEFICIENCY VIRUS 1-42 PVIMP_HSV11 VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCYVIRUS  1-39 (ISOLATE GB1) PVIMP_HSVEB PROBABLE INTEGRAL MEMBRANE PROTEINHERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)  85-134 PVIMP_HSVSA PROBABLEINTEGRAL MEMBRANE PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)148-182 335-369 PVIMP_VZVD INTEGRAL MEMBRANE PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11)  80-129 PVINT_SSV1 PROBABLE INTEGRAL MEMBRANE PROTEINVARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 107-151 155-189 267-301PVJ01_VACCC PROBABLE INTEGRASE SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 85-130 138-172 PVJ01_VACCV PROTEIN J1 VACCINIA VIRUS (STRAINCOPENHAGEN) 22-56 PVJ01_VARV PROTEIN J1 VACCINIA VIRUS (STRAIN WR) 22-56PVK03_VACCC PROTEIN J1 VARIOLA VIRUS 22-56 PVK03_VACCV PROTEIN K3VACCINIA VIRUS (STRAIN COPENHAGEN) 38-82 PVK07_VACCV PROTEIN K3 VACCINIAVIRUS (STRAIN WR) 38-82 PVL02_VACCC PROTEIN K7 VACCINIA VIRUS 115-149(STRAIN WR), AND (STRAIN COPENHAGEN) PVL02_VACCV PROTEIN L2 VACCINIAVIRUS (STRAIN COPENHAGEN) 47-81 PVL02_VARV PROTEIN L2 VACCINIA VIRUS(STRAIN WR) 47-92 PVL1_CRPVK PROTEIN L2 VARIOLA VIRUS 47-81 PVL1_FPVLPROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 261-295 331-383PAPILLOMAVIRUS (STRAIN KANS PVL1_HPV05 PROBABLE L1 PROTEIN AVIANPAPILLOMAVIRUS FPV-L 38-90 PVL1_HPV08 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5 355-393 PVL1_HPV1A PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 8 354-392 PVL1_HPV47 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A 345-379 PVL1_PAPVD PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 47 353-391 PVL1_REOVD PROBABLE L1 PROTEIN DEERPAPILLOMAVIRUS 23-57 PVL2_HPV05 MAJOR CORE PROTEIN LAMBDA 1 REOVIRUS(TYPE 3/STRAIN DEARING)  94-142 437-471 PVL2_HPV08 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 341-375 PVL2_HPV16 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 8 354-392 PVL2_HPV1A PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 16 295-333 PVL2_HPV31 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A 345-379 PVL2_HPV35 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 31 288-326 PVL2_HPV47 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 292-333 PVL2_HPV58 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 47 341-375 PVL2_HPV5B PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58 293-327 PVL3_REOVD PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 341-375 PVL3_REOVJ MINOR CORE PROTEIN LAMBDA 3REOVIRUS (TYPE 3/STRAIN DEARING) 107-148 1112- 1178 PVL3_REOVL MINORCORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 2/STRAIN D5/JONES) 1112- 1178PVL96_IRV1 MINOR CORE PROTEIN LAMBDA 3 REOVIRUS (TYPE 1/STRAIN LANG)107-148 331-365 1112- 1178 PVM01_VACCC L96 PROTEIN TIPULA IRIDESCENTVIRUS 146-180 198-236 PVM1_REOVL PROTEIN M1 VACCINIA VIRUS (STRAINCOPENHAGEN)  5-56 PVM21_REOVD MINOR VIRION STRUCTURAL REOVIRUS (TYPE1/STRAIN LANG) 287-321 PROTEIN MU-2 PVM22_REOVD MAJOR VIRION STRUCTURALREOVIRUS (TYPE 3/STRAIN DEARING) 416-450 619-663 PROTEIN MU-1/MU-1CPVM2_REOVJ MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN DEARING)416-450 618-662 PROTEIN MU-1/MU-1C PVM2_REOVL MAJOR VIRION STRUCTURALREOVIRUS (TYPE 2/STRAIN D5/JONES) 416-450 618-662 PROTEIN MU-1/MU-1CPVM3_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 416-450618-662 PROTEIN MU-1/MU-1C PVMA2_BRSVA MAJOR NONSTRUCTURAL PROTEIN MU-NSREOVIRUS (TYPE 3/STRAIN DEARING) 135-190 337-371 523-558 618-690PVMA2_HRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIAL VIRUS42-90 (STRAIN A51908) PVMA2_TRTV MATRIX GLYCOPROTEIN M2 HUMANRESPIRATORY SYNCYTIAL VIRUS 42-90 (STRAIN A2) PVMAT_CDVO MATRIXGLYCOPROTEIN M2 TURKEY RHINOTRACHEITIS VIRUS 36-70 PVMAT_INCJJ MATRIXPROTEIN CANINE DISTEMPER VIRUS 193-234 (STRAIN ONDERSTEPOORT) PVMAT_NDVAMATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/JJ/50)  73-114 151-208PVMAT_NDVB MATRIX PROTEIN NEWCASTLE DISEASE VIRUS 310-358 (STRAINAUSTRALIA-VICTORIA/32) PVMAT_PI3B MATRIX PROTEIN NEWCASTLE DISEASE VIRUS324-358 (STRAIN BEAUDETTE C/45) PVMAT_PI3H4 MATRIX PROTEIN BOVINEPARAINFLUENZA 3 VIRUS  99-133 204-252 PVMAT_RABVA MATRIX PROTEIN HUMANPARAINFLUENZA 3 VIRUS  99-133 204-252 (STRAIN NIH 47885) PVMAT_RABVCMATRIX PROTEIN RABIES VIRUS (STRAIN AVO1)  69-103 PVMAT_RABVE MATRIXPROTEIN RABIES VIRUS (STRAIN CVS-11)  69-103 PVMAT_RABVN MATRIX PROTEINRABIES VIRUS (STRAIN ERA)  69-103 PVMAT_RABVP MATRIX PROTEIN RABIESVIRUS (STRAIN NISHIGAHARA RCEH)  69-103 PVMAT_RABVS MATRIX PROTEINRABIES VIRUS (STRAIN PV)  69-103 PVMAT_SYNV MATRIX PROTEIN RABIES VIRUS(STRAIN SAD B19)  69-103 PVMAT_VSVIG MATRIX PROTEIN SONCHUS YELLOW NETVIRUS 246-280 PVME1_CVBM MATRIX PROTEIN VESICULAR STOMATITIS VIRUS198-232 (SEROTYPE INDIANA/STRAIN G PVME1_CVPFS E1 GLYCOPROTEIN BOVINECORONAVIRUS (STRAIN MEBUS) 175-209 PVME1_CVPPU E1 GLYCOPROTEIN PRECURSORPORCINE TRANSMISSIBLE GASTROENTERITIS  98-146 212-257 CORONAVIRUS (SPVME1_CVPRM E1 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLEGASTROENTERITIS 212-257 CORONAVIRUS (S PVME1_(—)CVTKE E1 GLYCOPROTEINPRECURSOR PORCINE RESPIRATORY CORONAVIRUS 212-257 (STRAIN RM4)PVME1_FIPV E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 28-62 175-209PVME1_IBV6 E1 GLYCOPROTEIN PRECURSOR FELINE INFECTIOUS PERITONITIS VIRUS212-257 (STRAIN 79-1146) PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS 21-55 177-218 (STRAIN 6/82) PVME1_IBVB2 E1 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS VIRUS 21-55 177-218 (STRAIN BEAUDETTE)PVME1_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-55177-218 (STRAIN BEAUDETTE M4 PVMEM_EBV E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS 177-218 (STRAIN KB8523) PVMP_CAMVC PROBABLE MEMBRANEPROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 36-94 PVMP_CAMVD MOVEMENTPROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN CM-1841)PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324(STRAIN D/H) PVMP_CAMVN MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS187-254 270-324 (STRAIN BBC) PVMP_CAMVS MOVEMENT PROTEIN CAULIFLOWERMOSAIC VIRUS 187-254 270-324 (STRAIN NY8153) PVMP_CAMVW MOVEMENT PROTEINCAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN STRASBOURG) PVMP_CERVMOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 187-254 270-324 (STRAIN W260)PVMP_FMVD MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 212-246PVMP_SOCMV MOVEMENT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 217-251PVMSA_HPBDB MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS  76-118PVMSA_HPBDC MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS272-313 324-361 (BROWN SHANGHAI DUCK ISOLATE S PVMSA_HPBDU MAJOR SURFACEANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS 271-312 323-360 (STRAIN CHINA)PVMSA_HPBDW MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS234-275 289-323 PVMSA_HPBGS MAJOR SURFACE ANTIGEN PRECURSOR DUCKHEPATITIS B VIRUS 272-313 324-361 (WHITE SHANGHAI DUCK ISOLATE S3PVMSA_HPBHE MAJOR SURFACE ANTIGEN PRECURSOR GROUND SQUIRREL HEPATITISVIRUS 210-244 PVMSA_WHV1 MAJOR SURFACE ANTIGEN PRECURSOR HERON HEPATITISB VIRUS 294-328 PVMSA_WHV59 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCKHEPATITIS VIRUS 1 208-242 PVMSA_WHV7 MAJOR SURFACE ANTIGEN PRECURSORWOODCHUCK HEPATITIS VIRUS 59 213-247 PVMSA_WHV81 MAJOR SURFACE ANTIGENPRECURSOR WOODCHUCK HEPATITIS VIRUS 7 213-247 PVMT1_DHVI1 PROBABLE MAJORSURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 213-247 PRECURSOR(INFECTIOUS CLONE) PVMT1_IAANN MATRIX PROTEIN 1 DHORI VIRUS (STRAININDIAN/1313/61) 201-235 PVMT1_IABAN MATRIX (M1) PROTEIN INFLUENZA AVIRUS  92-126 174-222 (STRAIN A/ANN ARBOR/6/60) PVMT1_IACAO MATRIX (M1)PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/BANGKOK/1/79)PVMT1_IAFOW MATRIX (M1) PROTEIN INFLUENZA A VIRUS 31-79 (STRAINA/CAMEL/MONGOLIA/82) PVMT1_IAFPR MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/FORT WARREN/1/50), AND (STR PVMT1_IAFPW MATRIX(M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/FOWL PLAGUEVIRUS/ROSTOCK PVMT1_IALE1 MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126174-222 (STRAIN A/FOWL PLAGUE VIRUS/WEYBRID PVMT1_IALE2 MATRIX (M1)PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/LENINGRAD/134/57)PVMT1_IAMAN MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222(STRAIN A/LENINGRAD/134/17/57) PVMT1_IAPOC MATRIX (M1) PROTEIN INFLUENZAA VIRUS  92-126 174-222 (STRAIN A/MALLARD/NEW YORK/6750/78) PVMT1_IAPUEMATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAIN A/PORTCHALMERS/1/73) PVMT1_IAUDO MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126174-222 (STRAIN A/PUERTO RICO/8/34) PVMT1_IAW1L MATRIX (M1) PROTEININFLUENZA A VIRUS  92-126 174-222 (STRAIN A/UDORN/307/72) PVMT1_IAZI1MATRIX (M1) PROTEIN INFLUENZA A VIRUS  92-126 174-222 (STRAINA/WILSON-SMITH/33 PVMT1_INBAC MATRIX (M1) PROTEIN INFLUENZA A VIRUS 92-126 174-222 (STRAIN A/SWINE/IOWA/15/30 PVMT1_INBAD MATRIX (M1)PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTEPVMT1_INBLE MATRIX (M1) PROTEIN INFLUENZA B VIRUS 175-209 (STRAIN B/ANNARBOR/1/66 [WILD-TYPE]) PVMT1_INBSI MATRIX (M1) PROTEIN INFLUENZA BVIRUS 175-209 (STRAIN B/LEE/40) PVMT2_INBAC MATRIX (M1) PROTEININFLUENZA B VIRUS 175-209 (STRAIN B/SINGAPORE/222/79) PVMT2_INBADPROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184 (STRAIN B/ANNARBOR/1/66 [COLD-ADAPTE PVMT2_INBLE PROBABLE MATRIX (M2) PROTEININFLUENZA B VIRUS 132-184 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE])PVMT2_INBSI PROBABLE MATRIX (M2) PROTEIN INFLUENZA B VIRUS 132-184(STRAIN B/LEE/40) PVMT8_MYXVL PROBABLE MATRIX (M2) PROTEIN INFLUENZA BVIRUS 132-184 (STRAIN B/SINGAPORE/222/79) PVN01_VACCC M-T8 PROTEINMYXOMA VIRUS (STRAIN LAUSANNE) 46-80 145-197 PVN01_VACCV PROTEIN N1VACCINIA VIRUS (STRAIN COPENHAGEN)  64-112 PVN34_ROTBS PROTEIN N1VACCINIA VIRUS (STRAIN WR)  64-112 PVN34_ROTPC NONSTRUCTURAL PROTEINNS34 BOVINE ROTAVIRUS  64-169 (GROUP C/STRAIN SHINTOKU) PVNCA_AAV2NONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS  64-117 121-169 (GROUPC/STRAIN COWDEN) PVNCA_RSV DNA REPLICATION PROTEIN ADENO-ASSOCIATEDVIRUS 2  91-125 217-251 PVNCN_PAVBO MAJOR NONCAPSID PROTEIN RICE STRIPEVIRUS 129-163 PVNCS_ADVG PROBABLE NONCAPSID PROTEIN NP1 BOVINEPARVOVIRUS 221-255 PVNCS_AEDEV NONCAPSID PROTEIN NS-1 ALEUTIAN MINKDISEASE PARVOVIRUS 19-60 270-304 (STRAIN G) PVNCS_FPV19 NONCAPSIDPROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 276-339 521-571 585-640 715-760780-849 (STRAIN GKV 002 002) PVNCS_MEVA NONCAPSID PROTEIN NS-1 FELINEPANLEUKOPENIA VIRUS 53-98 (STRAIN 193) PVNCS_MUMIM NONCAPSID PROTEINNS-1 MINK ENTERITIS VIRUS 53-98 (STRAIN ABASHIRI) PVNCS_MUMIV NONCAPSIDPROTEIN NS-1 MURINE MINUTE VIRUS (STRAIN MVMI) 35-91 261-297 PVNCS_PAVBONONCAPSID PROTEIN NS-1 MURINE MINUTE VIRUS 35-87 259-297 PVNCS_PAVCNPROBABLE NONCAPSID PROTEIN NS1 BOVINE PARVOVIRUS 181-222 PVNCS_PAVHBNONCAPSID PROTEIN NS-1 CANINE PARVOVIRUS (STRAIN N) 53-98 PVNCS_PAVHHNONCAPSID PROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS_PAVPNNONCAPSID PROTEIN NS-1 HAMSTER PARVOVIRUS H1 35-76 259-297 PVNS1_BTV10NONCAPSID PROTEIN NS-1 PORCINE PARVOVIRUS (STRAIN NADL-2) 24-77 169-210309-346 PVNS1_BTV17 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141(SEROTYPE 10/ISOLATE USA) PVNS1_BTV1A NONSTRUCTURAL PROTEIN NS1BLUETONGUE VIRUS 107-141 (SEROTYPE 17/ISOLATE USA) PVNS1_BTV1SNONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 1/ISOLATEAUSTRALIA) PVNS1_BTV20 NONSTRUCTURAL PROTEIN NS1 BLUETONGUE VIRUS107-141 (SEROTYPE 1/ISOLATE SOUTH AFRICA) PVNS1_EHDV2 NONSTRUCTURALPROTEIN NS1 BLUETONGUE VIRUS 107-141 (SEROTYPE 20/ISOLATE AUSTRALIA)PVNS1_IAANN NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASEVIRUS 401-454 (SEROTYPE 2/STRAI PVNS1_IACAO NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS 49-83 (STRAIN A/ANN ARBOR/6/60) PVNS1_IACKGNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 37-71 (STRAINA/CAMEL/MONGOLIA/82 PVNS1_IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS 49-83 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS1_IADA2 NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/CHICKEN/JAPAN/24)PVNS1_IADE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/DUCK/ALBERTA/60/76) PVNS1_IADU3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS 46-80 (STRAIN A/DUCK/ENGLAND/1/56) PVNS1_IAFOM NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS 46-80 (STRAIN A/DUCK/UKRAINE/1/63)PVNS1_IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/FORT MONMOUTH/1/47) PVNS1_IAFPR NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS 49-83 (STRAIN A/FORT WARREN/1/50, AND (STRA PVNS1_IALE1NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/FOWL PLAGUEVIRUS/ROSTOCK PVNS1_IALEN NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS49-83 (STRAIN A/LENINGRAD/134/57) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS 49-83 (STRAIN A/LENINGRAD/54/1) PVNS1_IAMANNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/MALLARD/ALBERTA/88/76 PVNS1_IAMAO NONSTRUCTURAL PROTEIN NS1 INFLUENZAA VIRUS 49-83 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS1_IAMYNNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/MALLARD/NEWYORK/6874/78 PVNS1_IAPI0 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS46-80 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS1_IAPI1 NONSTRUCTURAL PROTEINNS1 INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/119/79 PVNS1_IAPI2NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/PINTAIL/ALBERTA/121/79) PVNS1_IAPI3 NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS 49-83 (STRAIN A/PINTAIL/ALBERTA/268/78 PVNS1_IAPUENONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/PINTAIL/ALBERTA/358/79) PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS 49-83 (STRAIN A/PUERTO RICO/8/34) PVNS1_IATKCNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/TURKEY/BETHLEHEM-GLILIT/14 PVNS1_IATKR NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS 49-83 (STRAIN A/TURKEY/CANADA/63) PVNS1_IATRSNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/TURKEY/OREGON/71) PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS 46-80 (STRAIN A/TERN/SOUTH AFRICA/61 PVNS1_IAZI1 NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAIN A/TERN/TURKMENIA/18/72)PVNS1_INBAC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 49-83 (STRAINA/SWINE/IOWA/15/30) PVNS1_INBGA NONSTRUCTURAL PROTEIN NS1 INFLUENZA BVIRUS 143-177 (STRAIN B/ANN ARBOR/1/66[COLD-ADAPTE PVNS1_INBHKNONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/GA/86)PVNS1_INBHT NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAINB/HONG KONG/8/73), AND (STRAIN PVNS1_INBID NONSTRUCTURAL PROTEIN NS1INFLUENZA B VIRUS 143-177 (STRAIN B/HT/84) PVNS1_INBLE NONSTRUCTURALPROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/ID/86) PVNS1_INBMDNONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/LEE/40)PVNS1_INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAINB/MARYLAND/59) PVNS1_INBRU NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS143-177 277-337 (STRAIN B/PA/79) PVNS1_INBSI NONSTRUCTURAL PROTEIN NS1INFLUENZA B VIRUS 139-173 (STRAIN B/RU/69) PVNS1_INBSJ NONSTRUCTURALPROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAIN B/SINGAPORE/222/79)PVNS1_INBVJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS 143-177 (STRAINB/SINGAPORE/64) PVNS1_INBYA NONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS143-177 (STRAIN B/VICTORIA/87) PVNS2_AHSV9 NONSTRUCTURAL PROTEIN NS1INFLUENZA B VIRUS 143-177 (STRAIN B/YAMAGATA/1/73) PVNS2_BTV17NONSTRUCTURAL PROTEIN NS2 AFRICAN HORSE SICKNESS VIRUS  67-101 (SEROTYPE9) PVNS2_BTV1X NONSTRUCTURAL PROTEIN NS2 BLUETONGUE VIRUS 203-237(SEROTYPE 17/ISOLATE USA) PVNS2_CVMJH NONSTRUCTURAL PROTEIN NS2BLUETONGUE VIRUS (SEROTYPE 10) 203-237 PVNS2_EHDV2 NONSTRUCTURAL PROTEINNS2 MURINE CORONAVIRUS MHV (STRAIN JHM)  71-105 PVNS2_IAALANONSTRUCTURAL PROTEIN NS2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 206-272276-311 (SEROTYPE 2/STRAI PVNS2_IAANA NONSTRUCTURAL PROTEIN NS2INFLUENZA A VIRUS 14-93 (STRAIN A/ALASKA/6/77), AND (STRAIN A/UPVNS2_IAANN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAINA/ANAS ACUTA/PRIMORJE/695/76) PVNS2_IACHI NONSTRUCTURAL PROTEIN NS2INFLUENZA A VIRUS 14-93 (STRAIN A/ANN ARBOR/6/60), AND (STRAINPVNS2_IACKG NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAINA/CHILE/1/83) PVNS2_IACKJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS14-79 (STRAIN A/CHICKEN/GERMANY/N/49) PVNS2_IADA2 NONSTRUCTURAL PROTEINNS2 INFLUENZA A VIRUS 11-90 (STRAIN A/CHICKEN/JAPAN/24) PVNS2_IADE1NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAINA/DUCK/ALBERTA/60/76) PVNS2_IADU3 NONSTRUCTURAL PROTEIN NS2 INFLUENZA AVIRUS 11-90 (STRAIN A/DUCK/ENGLAND/1/56) PVNS2_IAFOM NONSTRUCTURALPROTEIN NS2 INFLUENZA A VIRUS 11-90 (STRAIN A/DUCK/UKRAINE/1/63)PVNS2_IAFOW NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAINA/FORT MONMOUTH/1/47) PVNS2_IAFPR NONSTRUCTURAL PROTEIN NS2 INFLUENZA AVIRUS 14-93 (STRAIN A/FORT WARREN/1/50) PVNS2_IALE2 NONSTRUCTURALPROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCKPVNS2_IALEN NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAINA/LENINGRAD/134/17/57) PVNS2_IAMA6 NONSTRUCTURAL PROTEIN NS2 INFLUENZA AVIRUS 14-93 (STRAIN A/LENINGRAD/54/1) PVNS2_IAMA8 NONSTRUCTURAL PROTEINNS2 INFLUENZA A VIRUS 14-79 (STRAIN A/MALLARD/ALBERTA/88/76) PVNS2_IAMANNONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAINA/MALLARD/ALBERTA/827/78) PVNS2_IAMAO NONSTRUCTURAL PROTEIN NS2INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNS2_IAMYNNONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/MALLARD/NEWYORK/6874/78) PVNS2_IAPI0 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS11-90 (STRAIN A/MYNAH/HANEDA-THAI/76) PVNS2_IAPI1 NONSTRUCTURAL PROTEINNS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/119/79)PVNS2_IAPI2 NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79 (STRAINA/PINTAIL/ALBERTA/121/79) PVNS2_IAPUE NONSTRUCTURAL PROTEIN NS2INFLUENZA A VIRUS 14-93 (STRAIN A/PINTAIL/ALBERTA/268/78) PVNS2_IATKBNONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93 (STRAIN A/PUERTORICO/8/34) PVNS2_IATKR NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-79(STRAIN A/TURKEY/BETHLEHEM-GLILIT/14 PVNS2_IATRS NONSTRUCTURAL PROTEINNS2 INFLUENZA A VIRUS 14-79 (STRAIN A/TURKEY/OREGON/71 PVNS2_IAUSSNONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 11-52 (STRAIN A/TERN/SOUTHAFRICA/61) PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZA A VIRUS 14-93(STRAIN A/USSR/90/77) PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA BVIRUS  2-43  59-119 (STRAIN B/LEE/40 PVNS2_INCJJ NONSTRUCTURAL PROTEINNS2 INFLUENZA B VIRUS  2-43  59-119 (STRAIN B/YAMAGATA/1/73) PVNS2_PVMNONSTRUCTURAL PROTEIN NS2 INFLUENZA C VIRUS 57-98 (STRAIN C/JJ/50)PVNS3_AHSV3 NONSTRUCTURAL PROTEIN 2 PNEUMONIA VIRUS OF MICE  70-104PVNS3_AHSV9 NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSE SICKNESS VIRUS 44-78166-215 (SEROTYPE 3) PVNS3_BRD NONSTRUCTURAL PROTEIN NS3 AFRICAN HORSESICKNESS VIRUS 37-78  88-122 166-215 (SEROTYPE 9) PVNS3_CVPFSNONSTRUCTURAL PROTEIN NS3 BROADHAVEN VIRUS 26-98 102-147 PVNS4_CVH22NONSTRUCTURAL PROTEIN 3-1 PORCINE TRANSMISSIBLE GASTROENTERITIS 13-51CORONAVIRUS (S PVNS4_RSV NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS(STRAIN 229E) 11-52 PVNS7_CVCAE NONSTRUCTURAL PROTEIN NS4 RICE STRIPEVIRUS  2-40 PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 CANINE ENTERICCORONAVIRUS (STRAIN K378) 11-47 PVNS7_FIPV NONSTRUCTURAL PROTEIN 7FELINE ENTERIC CORONAVIRUS (STRAIN 79-1683)  1-42 PVNSC_CDVONONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUS PERITONITIS VIRUS  1-42(STRAIN 79-1146) PVNSC_MEASE NONSTRUCTURAL PROTEIN C CANINE DISTEMPERVIRUS 50-84  95-152 (STRAIN ONDERSTEPOORT) PVNSC_MEASI NONSTRUCTURALPROTEIN C MEASLES VIRUS (STRAIN EDMONSTON) 43-84 PVNSC_MEASYNONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN IP-3-CA) 43-84 PVNSC_PI1HBNONSTRUCTURAL PROTEIN C MEASLES VIRUS (STRAIN YAMAGATA-1) 43-84PVNSC_PI1HC NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 133-167(STRAIN C35) PVNSC_PI1HD NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1VIRUS 133-167 (STRAIN C39) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMANPARAINFLUENZA 1 VIRUS 133-167 (STRAIN C1-5/73) PVNSC_PI3H4 NONSTRUCTURALPROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 40-75 133-167 (STRAIN C1-14/83)PVNSC_SEND6 NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 VIRUS  58-133161-199 (STRAIN NIH 47885) PVNSC_SENDH NONSTRUCTURAL PROTEIN C SENDAIVIRUS (STRAIN 6/94) 133-167 PVNSC_SENDZ NONSTRUCTURAL PROTEIN C SENDAIVIRUS (STRAIN HARRIS) 133-167 PVNSM_INSV NONSTRUCTURAL PROTEIN C SENDAIVIRUS (STRAIN Z) 133-167 PVNST_BUNGE NONSTRUCTURAL PROTEIN NS-MIMPATIENS NECROTIC SPOT VIRUS (INSV)  44-102 262-296 PVNST_BUNL7NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS GERMISTON 34-75 PVNST_BUNLCNONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE (ISOLATE L74)  5-39PVNST_MAGV NONSTRUCTURAL PROTEIN NS-S BUNYAVIRUS LA CROSSE  5-39PVNST_TOSV NONSTRUCTURAL PROTEIN NS-S MAGUARI VIRUS 35-69 PVNST_UUKNONSTRUCTURAL PROTEIN NS-S TOSCANA VIRUS (TOS) 144-183 PVNUA_PRVKANONSTRUCTURAL PROTEIN NS-S UUKUNIEMI VIRUS (UUK) 139-173 PVNUC_DHVI1PROBABLE NUCLEAR ANTIGEN PSEUDORABIES VIRUS (STRAIN KAPLAN) (PRV) 1134-1175 PVNUC_EBOV NUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) (DHO)209-243 PVNUC_IAANA NUCLEOPROTEIN EBOLA VIRUS 191-225 227-261 329-369PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/ANAS ACUTA/PRIMORJE/695/76) PVNUC_IABRA NUCLEOPROTEININFLUENZA A VIRUS  1-42 357-408 (STRAIN A/ANN ARBOR/6/60) PVNUC_IABUDNUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-408 (STRAIN A/BRAZIL/11/78)PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACKG NUCLEOPROTEIN INFLUENZAA VIRUS  1-42 357-409 (STRAIN A/CALIFORNIA/10/78) PVNUC_IACKPNUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/CHICKEN/GERMANY/N/49) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 (STRAIN A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADBENUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/DUCK/AUSTRALIA/749/80) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 (STRAIN A/DUCK/BEIJING/1/78) PVNUC_IADE1NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 360-408 (STRAINA/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 (STRAIN A/DUCK/ENGLAND/1/56) PVNUC_IADHKNUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/DUCK/ENGLAND/1/62) PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/DUCK/HONG KONG/7/75) PVNUC_IADMA NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/MEMPHIS/928/74PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/DUCK/MANITOBA/1/53) PVNUC_IADU2 NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/DUCK/NEW ZEALAND/31/76)PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS  96-154 357-408 (STRAINA/DUCK/UKRAINE/2/60) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS  1-42357-409 (STRAIN A/ENGLAND/19/55) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA AVIRUS  1-42 357-409 (STRAIN A/FORT MONMOUTH/1/47) PVNUC_IAFPDNUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/FORT WARREN/1/50)PVNUC_IAFPR NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/FOWL PLAGUE VIRUS/DOBSONA PVNUC_IAGRE NUCLEOPROTEIN INFLUENZAA VIRUS  1-42  96-154 360-408 (STRAIN A/FOWL PLAGUE VIRUS/ROSTOCKPVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 113-154 357-408(STRAIN A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU2 NUCLEOPROTEIN INFLUENZAA VIRUS  1-42 357-408 (STRAIN A/GULL/MARYLAND/5/77) PVNUC_IAGU3NUCLEOPROTEIN INFLUENZA A VIRUS  96-154 357-409 (STRAINA/GULL/MARYLAND/704/77) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-409 (STRAIN A/GULL/MARYLAND/1824/78) PVNUC_IAGUANUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAINA/GULL/MARYLAND/1815/79) PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-409 (STRAIN A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUNNUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409 (STRAINA/GULL/MASSACHUSETTS/26/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-409 (STRAIN A/GULL/MINNESOTA/945/80) PVNUC_IAHJINUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/HICKOX/40)PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/EQUINE/JILLIN/1/89) PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/EQUINE/LONDON/1416/73) PVNUC_IAHO1NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 (STRAINA/EQUINE/MIAMI/1/63) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42357-409 (STRAIN A/HONG KONG/1/68) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA AVIRUS  1-42 357-409 (STRAIN A/HONG/KONG/5/83) PVNUC_IAHTE NUCLEOPROTEININFLUENZA A VIRUS  96-154 357-408 (STRAIN A/EQUINE/PRAGUE/1/56)PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408PVNUC_IALEN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAINA/KIEV/59/79) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409(STRAIN A/LENINGRAD/54/1) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/MALLARD/NEW YORK/6750/78) PVNUC_IANEJNUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/MINK/SWEDEN/84) PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/NEW JERSEY/8/76) PVNUC_IAOHI NUCLEOPROTEININFLUENZA A VIRUS  1-42 357-409 (STRAIN A/NT/60/68) PVNUC_IAPARNUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/OHIO/4/83)PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/PARROT/ULSTER/73) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/PUERTO RICO/8/34) PVNUC_IASE0 NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/RUDDY TURNSTONE/NEWJERSE PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SEAL/MASSACHUSETTS/1/80) PVNUC_IASIN NUCLEOPROTEIN INFLUENZA AVIRUS  1-42 357-408 (STRAIN A/SHEARWATER/AUSTRALIA/72) PVNUC_IATEINUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SINGAPORE/1/57)PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/TEAL/ICELAND/29/80) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/TURKEY/MINNESOTA/1661/81)PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/TURKEY/ONTARIO/7732/66) PVNUC_IATRT NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 360-408 (STRAIN A/TERN/SOUTH AFRICA/61) PVNUC_IATX7NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-405 (STRAINA/TERN/TURKMENIA/18/72) PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS 1-42 357-409 (STRAIN A/TEXAS/1/77) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZAA VIRUS  1-42 357-409 (STRAIN A/UDORN/307/72) PVNUC_IAV16 NUCLEOPROTEININFLUENZA A VIRUS  1-42 357-408 (STRAIN A/USSR/90/77) PVNUC_IAWHNNUCLEOPROTEIN INFLUENZA A VIRUS 357-408 (STRAIN A/VICTORIA/5/68)PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-409(STRAIN A/WHALE/MAINE/328/84) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/WHALE/PACIFIC OCEAN/19/76)PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 357-409 (STRAINA/WILSON-SMITH/33) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/WISCONSIN/3523/88) PVNUC_IAZ41 NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/29/37)PVNUC_IAZCA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SWINE/41/49) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42357-409 (STRAIN A/SWINE/CAMBRIDGE/1/35) PVNUC_IAZGE NUCLEOPROTEININFLUENZA A VIRUS  1-42 357-409 (STRAIN A/SWINE/DANDONG/9/83)PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SWINE/GERMANY/2/81) PVNUC_IAZH3 NUCLEOPROTEIN INFLUENZA AVIRUS  1-42 357-409 (STRAIN A/SWINE/HONG KONG/6/76) PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/SWINE/HONG KONG/126/82) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 (STRAIN A/SWINE/HONG KONG/127/82) PVNUC_IAZI2NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/SWINE/IOWA/15/30) PVNUC_IAZI3 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/SWINE/IOWA/1976/31) PVNUC_IAZJ1 NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/IOWA/46)PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SWINE/ITALY/437/76) PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/ITALY/2/79) PVNUC_IAZJ4NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/SWINE/ITALY/141/81) PVNUC_IAZJA NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/SWINE/ITALY/839/89) PVNUC_IAZMA NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/JAMESBURG/42)PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SWINE/MAY/54) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS 1-42  96-154 357-408 (STRAIN A/SWINE/NETHERLANDS/12/85) PVNUC_IAZONNUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408 (STRAINA/SWINE/OHIO/23/35) PVNUC_IAZTE NUCLEOPROTEIN INFLUENZA A VIRUS  1-42 96-154 357-408 (STRAIN A/SWINE/ONTARIO/2/81) PVNUC_IAZW1 NUCLEOPROTEININFLUENZA A VIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/TENNESSEE/24/77)PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS  1-42  96-154 357-408(STRAIN A/SWINE/WISCONSIN/1/57) PVNUC_INBAA NUCLEOPROTEIN INFLUENZA AVIRUS  1-42  96-154 357-408 (STRAIN A/SWINE/WISCONSIN/1/61) PVNUC_INBACNUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514 (STRAIN B/ANNARBOR/1/86) PVNUC_INBAD NUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514(STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTE PVNUC_INBLE NUCLEOPROTEININFLUENZA B VIRUS  75-145 480-514 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE])PVNUC_INBSI NUCLEOPROTEIN INFLUENZA B VIRUS  75-146 480-514 (STRAINB/LEE/40) PVNUC_INCCA NUCLEOPROTEIN INFLUENZA B VIRUS  75-142 480-514(STRAIN B/SINGAPORE/222/79) PVNUC_MABVM NUCLEOPROTEIN INFLUENZA C VIRUS 92-203 406-447 (STRAIN C/CALIFORNIA/78) PVNUC_MABVP NUCLEOPROTEINMARBURG VIRUS (STRAIN MUSOKE) 173-207 322-407 PVO01_VACCC NUCLEOPROTEINMARBURG VIRUS (STRAIN POPP) 173-207 322-407 PVO01_VARV PROTEIN O1VACCINIA VIRUS (STRAIN COPENHAGEN) 102-145 245-279 341-382 581-615PVOR1_FXMV PROTEIN O1 VARIOLA VIRUS 102-145 245-279 341-382 581-615PVOR1_NMV 152 KD PROTEIN FOXTAIL MOSAIC VIRUS 293-327 PVOR1_PMV 186 KDPROTEIN NARCISSUS MOSAIC VIRUS (NMV) 1519- 1575 PVOR1_PVMR 176 KDPROTEIN PAPAYA MOSAIC POTEXVIRUS (PMV)  1-39 299-337 1474- 1532PVOR1_PVX 223 KD PROTEIN POTATO VIRUS M (STRAIN RUSSIAN) (PVM) 597-638682-759 PVOR1_PVXCP 165 KD PROTEIN POTATO VIRUS X (PVX) 516-550PVOR1_SMYEA 165 KD PROTEIN POTATO VIRUS X (STRAIN CP) (PVX) 510-547PVOR1_WCMVM 150 KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 308-342 931-965ASSOCIATED VIRUS (SMYE PVOR1_WCMVO 147 KD PROTEIN WHITE CLOVER MOSAICVIRUS 1240- (STRAIN M) (WCMV) 1289 PVP10_NPVAC 147 KD PROTEIN WHITECLOVER MOSAIC VIRUS 1240- (STRAIN O) (WCMV) 1289 PVP10_NPVOP P10 PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR  7-41 POLYHEDROSIS VIRUS ( PVP10_RBSDVP10 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID  7-50 POLYHEDROSIS VIRUSPVP10_RGDV PROTEIN S10 RICE BLACK STREAKED DWARF VIRUS 339-382 395-429506-556 (RBSDV) PVP10_WTV NONSTRUCTURAL PROTEIN PNS10 RICE GALL DWARFVIRUS (RGDV) 186-273 PVP11_RDV NONSTRUCTURAL PROTEIN PNS10 WOUND TUMORVIRUS (WTV) 220-254 PVP11_WTV NONSTRUCTURAL PROTEIN PNS11 RICE DWARFVIRUS (RDV) 25-80 273-314 PVP12_RDV NONSTRUCTURAL PROTEIN PNS11 WOUNDTUMOR VIRUS (WTV) 16-74 PVP12_WTV NONSTRUCTURAL PROTEIN P11 RICE DWARFVIRUS (RDV)) 140-181 PVP18_WTVNJ NONSTRUCTURAL PROTEIN PNS12 WOUND TUMORVIRUS (WTV)  68-108 PVP19_HSVEB NONSTRUCTURAL PROTEIN PNS12 WOUND TUMORVIRUS (STRAIN NJ)  68-108 (WTV) PVP23_HCMVA CAPSID ASSEMBLY AND DNAMATURATION EQUINE HERPESVIRUS TYPE 1 189-231 PROTE (STRAIN AB4P) (EHV-1)PVP23_HSV6U PROBABLE CAPSID PROTEIN VP23 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 41-82 146-180 PVP24_EBOV PROBABLE CAPSID PROTEIN VP23 HERPESSIMPLEX VIRUS 47-81 (TYPE 6/STRAIN UGANDA-1102) PVP26_HSVEBMEMBRANE-ASSOCIATED STRUCTURAL EBOLA VIRUS 166-200 PROTEIN V PVP26_HSVSACAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 36-77 (STRAIN AB4P)(EHV-1) PVP26_NPVOP CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI (STRAIN 11)41-78 PVP26_VZVD P26 PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 118-159POLYHEDROSIS VIRUS PVP2_AHSV4 CAPSID PROTEIN VP26 VARICELLA-ZOSTER VIRUS47-81 (STRAIN DUMAS) (VZV) PVP2_BTV10 OUTER CAPSID PROTEIN VP2 AFRICANHORSE SICKNESS VIRUS 136-188 270-304 410-465 614-662 684-720  976-(SEROTYPE 4/STRAIN VACCI 1056 PVP2_BTV11 OUTER CAPSID PROTEIN VP2BLUETONGUE VIRUS 168-225 (SEROTYPE 10/ISOLATE USA) PVP2_BTV17 OUTERCAPSID PROTEIN VP2 BLUETONGUE VIRUS  77-111 559-593 (SEROTYPE 11/ISOLATEUSA) PVP2_BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS  77-111168-209 (SEROTYPE 17/ISOLATE USA) PVP2_EHDV1 OUTER CAPSID PROTEIN VP2BLUETONGUE VIRUS 119-153 576-610 668-702 (SEROTYPE 1/ISOLATE SOUTHAFRICA) PVP2_ROTBR OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGICDISEASE VIRUS  72-106 247-301 405-453 461-495 895-929 (SEROTYPE 1) (EHDVPVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF)  2-94482-516 523-557 607-655 675-754 PVP2_ROTHW RNA-BINDING PROTEIN VP2BOVINE ROTAVIRUS (STRAIN UK)  2-94 483-517 524-558 608-656 676-755PVP2_ROTPC RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS 17-97 492-526 533-567617-658 685-764 (SEROTYPE 1/STRAIN WA) PVP2_ROTS1 RNA-BINDING PROTEINVP2 PORCINE ROTAVIRUS  1-50 52-99 194-228 515-551 599-643 705-746 (GROUPC/STRAIN COWDEN) PVP30_ASFE7 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS36-96 483-517 608-656 680-755 (STRAIN SA11) PVP31_FRG3V PHOSPHOPROTEINP30 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN E-75) (ASFV) PVP32_ASFB7EARLY 31 KD PROTEIN FROG VIRUS 3 (FV3) 227-261 PVP35_EBOV PHOSPHOPROTEINP32 AFRICAN SWINE FEVER VIRUS 29-89 (STRAIN BA71V) (ASFV) PVP35_NPVACPOLYMERASE COMPLEX PROTEIN VP35 EBOLA VIRUS  80-119 PVP35_NPVBM EARLY 35KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR  54-102 POLYHEDROSIS VIRUSPVP35_VACCC EARLY 35 KD PROTEIN BOMBYX MORI NUCLEAR POLYHEDROSIS  54-102224-258 VIRUS (BMNPV) PVP35_VACCP IMMUNODOMINANT ENVELOPE VACCINIA VIRUS(STRAIN COPENHAGEN) 140-181 PROTEIN P35 PVP35_VACCV IMMUNODOMINANTENVELOPE VACCINIA VIRUS (STRAIN L-IVP) 17-51 PROTEIN P35 PVP35_VARVIMMUNODOMINANT ENVELOPE VACCINIA VIRUS (STRAIN WR) 140-181 PROTEIN P35PVP3_AHSV4 IMMUNODOMINANT ENVELOPE VARIOLA VIRUS 141-182 PROTEIN P35PVP3_BTV10 VP3 CORE PROTEIN AFRICAN HORSE SICKNESS VIRUS 173-214 240-274667-704 (SEROTYPE 4/STRAIN VACCI PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUEVIRUS 214-255 853-894 (SEROTYPE 10/ISOLATE USA) PVP3_BTV1A VP3 COREPROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE 17/ISOLATE USA)PVP3_EHDV1 VP3 CORE PROTEIN BLUETONGUE VIRUS 214-255 853-894 (SEROTYPE1/ISOLATE AUSTRALIA) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGICDISEASE VIRUS 208-246 798-832 851-892 (SEROTYPE 1) (EHDV PVP3_GFLV VP3CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 208-246 735-770 798-832851-892 PVP3_RDV P3 PROTEIN GRAPEVINE FANLEAF VIRUS (GFLV)  96-133PVP3_ROTPC MAJOR 114 KD STRUCTURAL PROTEIN RICE DWARF VIRUS (RDV)299-337 817-872 PVP3_ROTS1 INNER CORE PROTEIN VP3 PORCINE ROTAVIRUS24-58 229-263 329-395 406-446 640-688 (GROUP C/STRAIN COWDEN) PVP40_EBVINNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-76 244-278331-365 415-492 662-696 PVP40_HSV11 CAPSID PROTEIN P40 EPSTEIN-BARRVIRUS 433-467 (STRAIN B95-8) (HUMAN HERPESVIRUS 4) PVP40_HSVEB CAPSIDPROTEIN P40 HERPES SIMPLEX VIRUS 206-257 599-633 (TYPE 1/STRAIN 17)PVP40_ILTVT CAPSID PROTEIN P40 EQUINE HERPESVIRUS TYPE 1 180-245 (STRAINAB4P) (EHV-1) PVP40_SCMVC CAPSID PROTEIN P40 INFECTIOUSLARYNGOTRACHEITIS VIRUS  1-35 509-557 (STRAIN THORNE V88 PVP40_VZVDCAPSID PROTEIN P40 SIMIAN CYTOMEGALOVIRUS 457-498 (STRAIN COLBURN)PVP41_NPVAC CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 167-246 486-522(STRAIN DUMAS) (VZV) PVP41_ROTS1 STRUCTURAL GLYCOPROTEIN GP41 AUTOGRAPHACALIFORNICA NUCLEAR 132-166 POLYHEDROSIS VIRUS ( PVP42_ROTS1 OUTERCAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  1-35 484-518528-630 PVP4A_VACCC OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAINSA11)  1-35 237-518 531-646 PVP4A_VACCV MAJOR CORE PROTEIN P4A PRECURSORVACCINIA VIRUS (STRAIN COPENHAGEN) 355-359 718-763 794-828 857-891PVP4A_VARV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN WR)262-296 355-359 718-763 794-828 857-891 PVP4B_FOWPV MAJOR CORE PROTEINP4A PRECURSOR VARIOLA VIRUS 355-389 719-764 795-829 858-892 PVP4B_VACCCMAJOR CORE PROTEIN P4B PRECURSOR FOWLPOX VIRUS 131-172 296-330PVP4B_VACCV MAJOR CORE PROTEIN P4B PRECURSOR VACCINIA VIRUS (STRAINCOPENHAGEN)  3-37 125-163 249-283 PVP4B_VARV MAJOR CORE PROTEIN P4BPRECURSOR VACCINIA VIRUS (STRAIN WR)  3-37 125-163 249-283 PVP4_BTV10MAJOR CORE PROTEIN P4B PRECURSOR VARIOLA VIRUS  3-37 125-163 249-283PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS 579-617 619-653 (SEROTYPE10/ISOLATE USA) PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS 569-607609-643 (SEROTYPE 11/ISOLATE USA) PVP4_BTV2A VP4 CORE PROTEIN BLUETONGUEVIRUS 569-607 609-643 (SEROTYPE 13/ISOLATE USA) PVP4_NCDV VP4 COREPROTEIN BLUETONGUE VIRUS 569-607 609-643 (SEROTYPE 2/ISOLATE USA)PVP4_RDV OUTER CAPSID PROTEIN VP4 NEBRASKA CALF DIARRHEA VIRUS 484-518528-630 (STRAIN NCDV-LINCOLN) PVP4_ROTB4 NONSTRUCTURAL PROTEIN PNS4 RICEDWARF VIRUS (RDV) 388-437 444-478 627-679 PVP4_ROTBC OUTER CAPSIDPROTEIN VP4 BOVINE ROTAVIRUS  1-35 112-146 338-379 484-518 528-653(SEROTYPE 6/STRAIN B641) PVP4_ROTBU OUTER CAPSID PROTEIN VP4 BOVINEROTAVIRUS  1-35 484-518 528-630 (STRAIN C486) PVP4_ROTEH OUTER CAPSIDPROTEIN VP4 BOVINE ROTAVIRUS  1-35 112-146 338-379 484-518 528-653(STRAIN UK) PVP4_ROTG1 OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS  1-35112-146 227-274 345-379 484-518 528-653 (STRAIN H-2) PVP4_ROTH1 OUTERCAPSID PROTEIN VP4 ROTAVIRUS (GROUP B/STRAIN IDIR) 117-151 476-519PVP4_ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273337-378 483-517 530-645 (SEROTYPE 1/STRAIN 1076) PVP4_ROTH6 OUTER CAPSIDPROTEIN VP4 HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652(SEROTYPE 2/STRAIN RV-5) PVP4_ROTHD OUTER CAPSID PROTEIN VP4 HUMANROTAVIRUS  1-35 112-146 237-274 338-379 484-518 531-646 (SEROTYPE1/STRAIN 69M) PVP4_ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35236-273 337-378 483-517 527-652 (SEROTYPE 2/STRAIN DS1) PVP4_ROTHK OUTERCAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-274 345-379 484-518 528-588(STRAIN K8) PVP4_ROTHL OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35337-378 483-517 527-652 (STRAIN KU) PVP4_ROTHM OUTER CAPSID PROTEIN VP4HUMAN ROTAVIRUS  1-35 236-273 337-378 483-517 527-652 (STRAIN L26)PVP4_ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 337-378483-517 530-645 (SEROTYPE 1/STRAIN M37) PVP4_ROTHP OUTER CAPSID PROTEINVP4 HUMAN ROTAVIRUS  1-35 237-274 338-379 484-518 531-645 (SEROTYPE3/STRAIN MCN13) PVP4_ROTHR OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS 1-35 236-273 337-378 483-517 527-652 (SEROTYPE 3/STRAIN P) PVP4_ROTHTOUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-38  91-146 227-274 (SEROTYPE3/STRAIN RRV) PVP4_ROTHV OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35236-273 337-378 483-517 530-644 (SEROTYPE 4/STRAIN ST. THOMAS 3)PVP4_ROTHW OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-273344-378 483-517 527-652 (SEROTYPE 4/STRAIN VA70 PVP4_ROTP5 OUTER CAPSIDPROTEIN VP4 HUMAN ROTAVIRUS  1-35 237-273 344-378 483-517 527-652(SEROTYPE 1/STRAIN WA) PVP4_ROTPC OUTER CAPSID PROTEIN VP4 PORCINEROTAVIRUS 112-146 484-518 528-629 (SEROTYPE 5/STRAIN OSU) PVP4_ROTPGOUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS  6-40 127-161 241-278 293-334580-614 (GROUP C/STRAIN COWDEN) PVP4_ROTPY OUTER CAPSID PROTEIN VP4PORCINE ROTAVIRUS  1-35 236-273 337-378 483-517 530-564 569-638 (STRAINGOTTFRIED) PVP4_ROTRH OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS  1-35112-146 237-274 484-518 528-629 (STRAIN YM) PVP4_RPTSF OUTER CAPSIDPROTEIN VP4 RHESUS ROTAVIRUS  1-38 112-146 237-274 338-379 484-522531-646 PVP4_ROTSS OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS  1-35484-518 528-630 (STRAIN SA11-FEM) PVP4_WTV DE OUTER CAPSID PROTEIN VP4SIMIAN 11 ROTAVIRUS  1-35 237-274 345-379 484-518 531-646 (STRAINSA11-SEM) PVP5_AHSV4 NONSTRUCTURAL PROTEIN PNS4 WOUND TUMOR VIRUS (WTV)28-62 565-621 PVP5_BRD OUTER CAPSID PROTEIN VP5 AFRICAN HORSE SICKNESSVIRUS  7-58 113-229 (SEROTYPE 4/STRAIN VACCI PVP5_BTV10 OUTER CAPSIDPROTEIN VP5 BROADHAVEN VIRUS (BRD) 45-86  98-226 PVP5_BTV11 OUTER CAPSIDPROTEIN VP5 BLUETONGUE VIRUS 14-58  92-150 154-222 404-438 (SEROTYPE10/ISOLATE USA) PVP5_BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS14-58  92-150 154-222 404-445 (SEROTYPE 11/ISOLATE USA) PVP5_BTV1A OUTERCAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58 154-222 404-438 (SEROTYPE13/ISOLATE USA) PVP5_BTV1S OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS14-58  92-143 148-222 404-438 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP5_BTV2AOUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS 14-58  92-143 148-222 404-438(SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP5_EHDV1 OUTER CAPSID PROTEIN VP5BLUETONGUE VIRUS 14-58  92-222 404-438 (SEROTYPE 2/ISOLATE USA) PVP5_RDVOUTER CAPSID PROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 24-58 92-126 163-233 291-325 399-433 (SEROTYPE 1) (EHDV PVP5_WTV OUTER COATPROTEIN P5 RICE DWARF VIRUS (RDV) 38-86  95-136 550-594 PVP61_BTV10OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 434-503 547-581 751-798PVP61_MRDV VP6 PROTEIN BLUETONGUE VIRUS 163-215 (SEROTYPE 10/ISOLATEUSA) PVP61_NPVAC PROBABLE NONSTRUCTURAL 41.0 KD MAIZE ROUGH DWARF VIRUS(MRDV) 128-202 PROTEIN PVP62_BTV10 61 KD PROTEIN AUTOGRAPHA CALIFORNICANUCLEAR 29-96 351-386 POLYHEDROSIS VIRUS ( PVP64_NPVOP VP6 PROTEINBLUETONGUE VIRUS 47-88 159-207 214-251 (SEROTYPE 10/ISOLATE USA)PVP67_NPVAC MAJOR ENVELOPE GLYCOPROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID296-361 431-479 PRECURSOR POLYHEDROSIS VIRUS PVP67_NPVGM MAJOR ENVELOPEGLYCOPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 289-364 443-477PRECURSOR POLYHEDROSIS VIRUS ( PVP6_BTV11 MAJOR ENVELOPE GLYCOPROTEINGALLERIA MELLONELLA NUCLEAR 206-281 POLYHEDROSIS VIRUS (GMN PVP6_BTV13VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 11/ISOLATE USA)PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS 159-211 (SEROTYPE 13/ISOLATEUSA) PVP6_BTV1S VP6 PROTEIN BLUETONGUE VIRUS  68-102 159-211 (SEROTYPE17/ISOLATE USA) PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS 12-78 163-211(SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP6_RDV VP6 PROTEIN BLUETONGUE VIRUS44-78 135-187 (SEROTYPE 2/ISOLATE USA) PVP6_WTV STRUCTURAL PROTEIN P6RICE DWARF VIRUS (RDV) 150-191 296-344 360-401 PVP6_WTVNJ STRUCTURALPROTEIN P6 WOUND TUMOR VIRUS (WTV) 144-178 286-334 400-434 PVP74_NPVACSTRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS 144-178 286-334 (STRAIN NJ)(WTV) PVP74_NPVCF P74 PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 387-456POLYHEDROSIS VIRUS ( PVP75_HSVSA P74 PROTEIN CHORISTONEURA FUMIFERANANUCLEAR 385-453 POLYHEDROSIS VIRU PVP79_NPVAC PROBABLE MEMBRANE ANTIGEN75 HERPESVIRUS SAIMIRI (STRAIN 11) 50-99 163-211 931-984 PVP7_BTV10 79KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 44-78 363-397 406-440POLYHEDROSIS VIRUS ( PVP7_BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS184-228 (SEROTYPE 10/ISOLATE USA), (SEROTYPE PVP7_BTV17 VP7 CORE PROTEINBLUETONGUE VIRUS 201-235 (SEROTYPE 13/ISOLATE USA) PVP7_BTV1A VP7 COREPROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 17/ISOLATE USA) PVP7_BTV1SVP7 CORE PROTEIN BLUETONGUE VIRUS 184-235 (SEROTYPE 1/ISOLATE AUSTRALIA)PVP7_BTV2A VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228 (SEROTYPE 1/ISOLATESOUTH AFRICA) PVP7_EHDV1 VP7 CORE PROTEIN BLUETONGUE VIRUS 184-228(SEROTYPE 2/ISOLATE USA) PVP7_RDV VP7 CORE PROTEIN EPIZOOTIC HEMORRHAGICDISEASE VIRUS 16-50 134-178 (SEROTYPE 1) (EHDV PVP7_WTV NONSTRUCTURALPROTEIN PNS7 RICE DWARF VIRUS (RDV) 47-95 172-255 PVP80_NPVACNONSTRUCTURAL PROTEIN PNS7 WOUND TUMOR VIRUS (WTV) 47-84 195-243 458-495PVP87_NPVOP CAPSID PROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR  7-51 99-142 156-204 221-298 POLYHEDROSIS VIRUS ( PVP8_BTV10 CAPSID PROTEINP87 ORGYIA PSEUDOTSUGATA MULTICAPSID  80-162 410-451 POLYHEDROSIS VIRUSPVP8_BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219(SEROTYPE 10/ISOLATE USA) PVP8_BTV13 NONSTRUCTURAL PROTEIN P8 BLUETONGUEVIRUS  54-102 185-219 (SEROTYPE 11/ISOLATE USA) PVP8_BTV17 NONSTRUCTURALPROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE 13/ISOLATE USA)PVP8_BTV1A NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219(SEROTYPE 17/ISOLATE USA) PVP8_BTV1S NONSTRUCTURAL PROTEIN P8 BLUETONGUEVIRUS  54-102 185-219 (SEROTYPE 1/ISOLATE AUSTRALIA) PVP8_BTV2ANONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS  54-102 185-219 (SEROTYPE1/ISOLATE SOUTH AFRICA) PVP8_FOWPV NONSTRUCTURAL PROTEIN P8 BLUETONGUEVIRUS  54-102 185-219 (SEROTYPE 2/ISOLATE USA) PVP9_RDV STRUCTURALPROTEIN VP8 PRECURSOR FOWLPOX VIRUS 193-245 PVP9_WTV NONSTRUCTURALPROTEIN PNS9 RICE DWARF VIRUS (RDV) 13-47 186-226 PVP9_WTVNJ STRUCTURALPROTEIN P9 WOUND TUMOR VIRUS (WTV) 140-212 PVPG_BYDV1 STRUCTURAL PROTEINP9 WOUND TUMOR VIRUS 140-212 (STRAIN NJ) (WTV) PVPHE_NPVAC PUTATIVEGENOME-LINKED PROTEIN BARLEY YELLOW DWARF VIRUS 25-59 PRECURSOR (ISOLATEMAV-PS1) (BYDV) PVPHE_NPVOP 29 KD POLYHEDRAL ENVELOPE PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR 146-223 POLYHEDROSIS VIRUS ( PVPR_SIVML 32 KDPOLYHEDRAL ENVELOPE PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 131-201206-265 POLYHEDROSIS VIRUS PVPU_HV1A2 VPR PROTEIN SIMIANIMMUNODEFICIENCY VIRUS  78-115 (K78 ISOLATE) (SIV-MAC) PVPU_HV1B1 VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  1-38 (ARV2/SF2 ISOLATEPVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-72 (BH10ISOLATE) (HI PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-72 (BH8 ISOLATE) (HIV PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  4-59 (BRAIN ISOLATE) (H PVPU_HV1C4 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  4-72 (BRU ISOLATE) (HIV PVPU_HV1EL VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-40 (CDC-451 ISOLATE)PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  6-40 (ELIISOLATE) (HIV- PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE1  5-72 (HXB2 ISOLATE) (HI PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  2-50 (JH3 ISOLATE) (HIV- PVPU_HV1MA VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  4-59 (JRCSF ISOLATE) (H PVPU_HV1ND VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  5-50 (MAL ISOLATE) (HIPVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-40 (NDKISOLATE) (HI PVPU_HV1RH VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 4-72 (PV22 ISOLATE) (HI PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1  1-39 (RF/HAT ISOLATE) ( PVPU_HV1Z2 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  4-59 (SF162 ISOLATE) (HI PVPU_SIVCZ VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  6-40 (Z2/CDC-Z34 ISOLATPVPX_HV2D2 VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 21-78(SIV(CPZ)) (CIV) PVRNA_BSMV VPX PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 42-85 (ISOLATE D205,7) (H PVS05_ROTS1 ALPHA-A PROTEIN BARLEYSTRIPE MOSAIC VIRUS (BSMV) 40-74 857-898 PVS06_ROTBS NONSTRUCTURALPROTEIN NCVP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 248-287 PVS06_ROTGA VP6PROTEIN BOVINE ROTAVIRUS  6-44 (GROUP C/STRAIN SHINTOKU) PVS06_ROTGI VP6PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV)  69-144 (ADULT DIARRHEA ROTAPVS06_ROTHC VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 24-58  64-103PVS06_ROTPC VP6 PROTEIN HUMAN ROTAVIRUS  9-43 (GROUP C/STRAIN BRISTOL)PVS07_ROTBJ VP6 PROTEIN PORCINE ROTAVIRUS  9-43 (GROUP C/STRAIN COWDEN)PVS07_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KN-4)  2-36282-320 PVS07_ROTP5 NONSTRUCTURAL PROTEIN NCVP3 BOVINE ROTAVIRUS (STRAINUK)  88-153 199-236 PVS07_ROTS1 NONSTRUCTURAL PROTEIN NCVP3 PORCINEROTAVIRUS  88-162 202-236 (SEROTYPE 5/STRAIN OSU) PVS08_ROTBUNONSTRUCTURAL PROTEIN NCVP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  88-153199-236 PVS08_ROTS1 NONSTRUCTURAL PROTEIN NS2/VP9 BOVINE ROTAVIRUS(STRAIN UK)  2-70  75-119 160-226 PVS09_ROTB4 NONSTRUCTURAL PROTEINNCVP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  2-46 144-212 217-255PVS09_ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-54 282-320 (SEROTYPE6/STRAIN B641) PVS09_ROTB6 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5) 2-43 282-320 PVS09_ROTBA GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-54282-320 (SEROTYPE 6/STRAIN 61A) PVS09_ROTBB GLYCOPROTEIN VP7 BOVINEROTAVIRUS (STRAIN A44)  2-54 282-320 PVS09_ROTBK GLYCOPROTEIN VP7 BOVINEROTAVIRUS  2-54 282-320 (SEROTYPE 10/STRAIN B223) PVS09_ROTBNGLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN KK3)  2-54 282-320 PVS09_ROTBTGLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN NCDV)  2-54 282-320PVS09_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS  2-43 282-320 (SEROTYPE1/STRAIN T449) PVS09_ROTC7 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK) 2-54 282-320 PVS09_ROTEL GLYCOPROTEIN VP7 CHICKEN ROTAVIRUS A 285-326(SEROTYPE 7/STRAIN CH2) PVS09_ROTGA GLYCOPROTEIN VP7 EQUINE ROTAVIRUS(STRAIN L338) 282-320 PVS09_ROTGI GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS(GROUP B/STRAIN ADRV) 43-77 (ADULT DIARRHEA ROTA PVS09_ROTH4GLYCOPROTEIN VP7 PRECURSOR ROTAVIRUS (GROUP B/STRAIN IDIR) 45-79PVS09_ROTH9 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE4/STRAIN RV-4) PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320(SEROTYPE G/STRAIN RK9) PVS09_ROTHB GLYCOPROTEIN VP7 HUMAN ROTAVIRUS282-320 (SEROTYPE 2/STRAIN HU5) PVS09_ROTHD GLYCOPROTEIN VP7 HUMANROTAVIRUS  2-43 282-320 (SEROTYPE G/STRAIN B37) PVS09_ROTHH GLYCOPROTEINVP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN DS1) PVS09_ROTHLGLYCOPROTEIN VP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN HN126)PVS09_ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (STRAIN L26)  1-35 282-320PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE1/STRAIN M37) PVS09_ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS  2-43 282-320(SEROTYPE 1/STRAIN MO AND STRAIN D) PVS09_ROTHR GLYCOPROTEIN VP7 HUMANROTAVIRUS 282-320 (SEROTYPE 3/STRAIN P) PVS09_ROTHS GLYCOPROTEIN VP7HUMAN ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN RRV) PVS09_ROTHT GLYCOPROTEINVP7 HUMAN ROTAVIRUS 282-320 (SEROTYPE 2/STRAIN S2) PVS09_ROTHVGLYCOPROTEIN VP7 HUMAN ROTAVIRUS 18-56 208-242 282-320 (SEROTYPE4/STRAIN ST. THOMAS 3) PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS18-56 208-242 282-320 (SEROTYPE 4/STRAIN VA70) PVS09_ROTP2 GLYCOPROTEINVP7 HUMAN ROTAVIRUS  2-43 282-320 (SEROTYPE 1/STRAIN WA) PVS09_ROTP3GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 3/STRAIN AT/76)PVS09_ROTP4 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE3/STRAIN CRW-8) PVS09_ROTP5 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS  2-56208-242 282-320 (SEROTYPE 4/STRAIN OSU) PVS09_ROTP6 GLYCOPROTEIN VP7PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN OSU) PVS09_ROTPBGLYCOPROTEIN VP7 PORCINE ROTAVIRUS 282-320 (SEROTYPE 5/STRAIN TFR-41)PVS09_ROTPK GLYCOPROTEIN VP7 PORCINE ROTAVIRUS 18-56 208-242 282-320(SEROTYPE 4/STRAIN BEN-144) PVS09_ROTPM GLYCOPROTEIN VP7 PORCINEROTAVIRUS (STRAIN K) 18-56 282-320 PVS09_ROTPY GLYCOPROTEIN VP7 PORCINEROTAVIRUS 18-56 208-242 282-320 (SEROTYPE 4/STRAIN BMI-1) PVS09_ROTRHGLYCOPROTEIN VP7 PORCINE ROTAVIRUS (STRAIN YM)  1-35 282-320 PVS09_ROTS1GLYCOPROTEIN VP7 RHESUS ROTAVIRUS 282-320 PVS10_ROTBN GLYCOPROTEIN VP7SIMIAN 11 ROTAVIRUS (STRAIN SA11) 282-320 PVS10_ROTBS NONSTRUCTURALGLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN NCDV)  73-161 PVS10_ROTBUMINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS 17-58 (GROUP C/STRAINSHINTOKU) PVS10_ROTH2 NONSTRUCTURAL GLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS(STRAIN UK)  73-161 PVS10_ROTH7 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMANROTAVIRUS (STRAIN A28)  73-162 PVS10_ROTH8 NONSTRUCTURAL GLYCOPROTEINNCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 2)  73-162 PVS10_ROTHCNONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A64/CLONE 6) 73-162 PVS10_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 121-158(GROUP C/STRAIN BRISTOL) PVS10_ROTS1 NONSTRUCTURAL GLYCOPROTEIN NCVP5HUMAN ROTAVIRUS  73-136 (SEROTYPE 1/STRAIN WA) PVS11_ROTGA NONSTRUCTURALGLYCOPROTEIN NCVP5 SIMIAN 11 ROTAVIRUS (STRAIN SA11)  73-162 PVS11_ROTGINONSTRUCTURAL PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 24-65  96-130(ADULT DIARRHEA ROTA PVS11_ROTH5 NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUPB/STRAIN IDIR)  9-68 PVS11_ROTH6 MINOR OUTER CAPSID PROTEIN HUMANROTAVIRUS 100-145 (SEROTYPE 2/STRAIN RV-5) PVS11_ROTHB MINOR OUTERCAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPE 1/STRAIN 69M)PVS11_ROTHD MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS 107-144 (SEROTYPEG/STRAIN B37) PVS11_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS111-145 (SEROTYPE 2/STRAIN DS1) PVS11_ROTS1 MINOR OUTER CAPSID PROTEINHUMAN ROTAVIRUS 111-145 (SEROTYPE 1/STRAIN WA) PVS48_TBRVC MINOR OUTERCAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 111-145 PVSH_MUMP1SATELLITE RNA 48 KD PROTEIN TOMATO BLACK RING VIRUS 217-265 (STRAIN C)(TBRV) PVSH_MUMP2 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN SBL-1), 9-46 AND MUMPS VIRUS (STRAIN SBL) PVSH_MUMP4 SMALL HYDROPHOBIC PROTEINMUMPS VIRUS (STRAIN EDINGBURGH 2), 13-47 AND (STRAIN EDINGB PVSH_MUMPASMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN EDINGBURGH 4) 13-47PVSH_MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA)13-51 PVSH_MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST)13-52 PVSH_MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS) 9-46 PVSH_MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAINJERYL-LYNN)  9-46 PVSH_MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS(STRAIN KILHAM)  9-51 PVSH_MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS(STRAIN BRISTOL 1) 13-55 PVSH_MUMPT SMALL HYDROPHOBIC PROTEIN MUMPSVIRUS (STRAIN MIYAHARA VACCINE) 17-51 PVSH_MUMPU SMALL HYDROPHOBICPROTEIN MUMPS VIRUS (STRAIN TAKAHASHI) 13-47 PVSI1_REOVD SMALLHYDROPHOBIC PROTEIN MUMPS VIRUS 13-47 (STRAIN URABE VACCINE AM9)PVSI1_REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING) 8-122 127-175 222-259 PVSI1_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS(TYPE 2/STRAIN D5/JONES)  1-178 PVSI2_REOVD SIGMA 1 PROTEIN PRECURSORREOVIRUS (TYPE 1/STRAIN LANG)  3-107 112-198 PVSI2_REOVL SIGMA 2 PROTEINREOVIRUS (TYPE 3/STRAIN DEARING) 350-384 PVSIS_REOVD SIGMA 2 PROTEINREOVIRUS (TYPE 1/STRAIN LANG) 350-384 PVSIS_REOVJ SIGMA 1-S PROTEINREOVIRUS (TYPE 3/STRAIN DEARING)  85-119 PVST2_HEVBU SIGMA 1-S PROTEINREOVIRUS (TYPE 2/STRAIN D5/JONES)  7-45 PVST2_HEVME STRUCTURAL PROTEIN 2PRECURSOR HEPATITIS E VIRUS (STRAIN BURMA) (HEV) 318-352 PVST2_HEVMYSTRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS (STRAIN MEXICO) (HEV)317-351 PVST2_HEVPA STRUCTURAL PROTEIN 2 PRECURSOR HEPATITIS E VIRUS(STRAIN MYANMAR) (HEV) 318-352 PVST2_HEVRH STRUCTURAL PROTEIN 2PRECURSOR HEPATITIS E VIRUS (STRAIN PAKISTAN) (HEV) 318-352 PVT3A_CAPVISTRUCTURAL PROTEIN 2 HEPATITIS E VIRUS (ISOLATE RHESUS) (HEV) 186-220PVT4_CAPVI PROTEIN T3A CAPRIPOXVIRUS (STRAIN INS-1) 120-158 PVT4_CAPVKT4 PROTEIN CAPRIPOXVIRUS (STRAIN INS-1)  86-120 PVTER_EBV T4 PROTEINCAPRIPOXVIRUS (STRAIN KS-1)  86-120 PVTER_HCMVA PROBABLE DNA PACKAGINGPROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 235-290 595-629 (HUMANHERPESVIRUS 4) PVTER_HSV6U PROBABLE DNA PACKAGING PROTEIN HUMANCYTOMEGALOVIRUS (STRAIN AD169) 417-451 617-658 PVTER_HSVEB PROBABLE DNAPACKAGING PROTEIN HERPES SIMPLEX VIRUS 468-502 (TYPE 6/STRAINUGANDA-1102) PVTER_HSVI1 PROBABLE DNA PACKAGING PROTEIN EQUINEHERPESVIRUS TYPE 1 11-45 (STRAIN AB4P) (EHV-1) PVTER_HSVSA PROBABLE DNAPACKAGING PROTEIN ICTALURID HERPESVIRUS 1  98-136 698-744 (CHANNELCATFISH VIRUS) (CCV) PVTER_VZVD PROBABLE DNA PACKAGING PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 226-267 PVV_PI4HA PROBABLE DNA PACKAGINGPROTEIN VARICELLA-ZOSTER VIRUS 588-622 (STRAIN DUMAS) (VZV) PVY1_SEND6 VPROTEIN HUMAN PARAINFLUENZA 4A VIRUS  4-38 (STRAIN TOSHIBA) (PIV-4A)PY101_SSV1 Y1 PROTEIN SENDAI VIRUS (STRAIN 6/94) 104-138 PY108_SSV1HYPOTHETICAL 10.1 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLE SSV1 16-80PY110_SSV1 HYPOTHETICAL 10.8 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARITCLESSV1  4-65 PY119_SSV1 HYPOTHETICAL 11.0 KD PROTEIN SULFOLOBUS VIRUS-LIKEPARITCLE SSV1 55-59 PY11K_TYDVA HYPOTHETICAL 11.9 KD PROTEIN SULFOLOBUSVIRUS-LIKE PARITCLE SSV1 30-96 PY12K_FCVC6 HYPOTHETICAL 11.2 KD PROTEINTOBACCO YELLOW DWARF VIRUS 53-87 (STRAIN AUSTRALIA) (TYDV) PY12K_FCVF9HYPOTHETICAL 12.2 KD PROTEIN FELINE CALICIVIRUS  4-38 IN COAT PROTEIN(STRAIN CF1/68 FIV) (FCV) PY12K_RHDV HYPOTHETICAL 12.1 KD PROTEIN FELINECALICIVIRUS  4-38 IN COAT PROTEIN (STRAIN F9) (FCV) PY12K_RHDV3HYPOTHETICAL 12.7 KD PROTEIN RABBIT HEMORRHAGIC DISEASE VIRUS 13-50 INCOAT PROTEI (RHDV) PY13K_CLVK HYPOTHETICAL 12.7 KD PROTEIN RABBITHEMORRHAGIC DISEASE VIRUS 13-50 IN COAT PROTEIN (STRAIN V-351) (RHDV)PY13K_CLVN HYPOTHETICAL 13.1 KD PROTEIN CASSAVA LATENT VIRUS 40-77(STRAIN WEST KENYAN 844) PY13K_NPVOP HYPOTHETICAL 13.1 KD PROTEINCASSAVA LATENT VIRUS 43-77 (STRAIN NIGERIAN) PY13K_SSV1 HYPOTHETICAL14.5 KD PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 16-67 IN 39 KD PROTEINPOLYHEDROSIS VIRUS PY14K_SSV1 HYPOTHETICAL 13.2 KD PROTEIN SULFOLOBUSVIRUS-LIKE PARTICLE SSV1  2-36 62-96 PY168_ADE02 HYPOTHETICAL 13.7 KDPROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  5-39 PY16K_SSV1HYPOTHETICAL PROTEIN C-168 HUMAN ADENOVIRUS TYPE 2 119-166 PY17K_SSV1HYPOTHETICAL 15.6 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  1-35 77-111 PY18K_SSV1 HYPOTHETICAL 17.8 KD PROTEIN SULFOLOBUS VIRUS-LIKEPARTICLE SSV1  1-45 119-153 PY20K_SSV1 HYPOTHETICAL 18.0 KD PROTEINSULFOLOBUS VIRUS-LIKE PARTICLE SSV1 102-136 PY28K_SSV1 HYPOTHETICAL 20.4KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  73-107 PY2_SOCMVHYPOTHETICAL 28.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 127-180PY31K_SSV1 HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE VIRUS 117-154PY32K_SSV1 HYPOTHETICAL 31.5 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLESSV1  7-97 100-141 PY38K_NPVAC HYPOTHETICAL 31.7 KD PROTEIN SULFOLOBUSVIRUS-LIKE PARTICLE SSV1 230-278 PY3_SOCMV HYPOTHETICAL 37.7 KD PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 133-241 POLYHEDROSIS VIRUS ( PY5K9_SSV1HYPOTHETICAL PROTEIN 3 SOYBEAN CHLOROTIC MOTTLE VIRUS 115-149 PY7_SOCMVHYPOTHETICAL 5.9 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1  1-51PY85K_SSV1 HYPOTHETICAL PROTEIN 7 SOYBEAN CHLOROTIC MOTTLE VIRUS 56-94PY8_SOCMV HYPOTHETICAL 85.7 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLESSV1  81-125 503-537 546-587 658-700 PYB01_FOWPM HYPOTHETICAL PROTEIN 8SOYBEAN CHLOROTIC MOTTLE VIRUS 46-83 PYB04_FOWPM HYPOTHETICAL BAMHI-ORF1PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])  74-115 184-221PYB05_FOWPM HYPOTHETICAL BAMHI-ORF4 PROTEIN FOWLPOX VIRUS (ISOLATEHP-438 [MUNICH]) 29-70 PYB06_FOWPM HYPOTHETICAL BAMHI-ORF5 PROTEINFOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])  3-37 61-95 PYB07_FOWPMHYPOTHETICAL BAMHI-ORF6 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH])115-149 PYB10_FOWPM HYPOTHETICAL BAMHI-ORF7 PROTEIN FOWLPOX VIRUS(ISOLATE HP-438 [MUNICH]) 344-378 PYB12_FOWPM HYPOTHETICAL BAMHI-ORF10PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 162-253 PYB13_FOWPMHYPOTHETICAL BAMHI-ORF12 PROTEIN FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 4-47 117-153 PYBL2_EBV HYPOTHETICAL BAMHI-ORF13 PROTEIN FOWLPOX VIRUS(ISOLATE HP-438 [MUNICH]) 122-163 PYDH1_HSVS7 HYPOTHETICAL BBLF2 PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 458-506 (HUMAN HERPESVIRUS 4)PYF30_FOWP1 HYPOTHETICAL 24.1 KD PROTEIN IN HERPESVIRUS SAIMIRI (STRAIN484-77) 147-188 DHFR 3′REGION PYGA1_HSVMB HYPOTHETICAL 30.9 KD PROTEINFOWLPOX VIRUS (STRAIN FP-1) 160-204 PYGA1_HSVMM HYPOTHETICAL 23.6 KDPROTEIN MAREK'S DISEASE HERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN BC-1)(MDHV) PYH22_VACCV HYPOTHETICAL 23.6 KD PROTEIN MAREK'S DISEASEHERPESVIRUS 176-211 IN GLYCOPROTEI (STRAIN MD5) (MDHV) PYHR3_VACCVHYPOTHETICAL 21.7 KD HINDIII-C VACCINIA VIRUS (STRAIN WR) 34-78  95-139PROTEIN PYKR4_EBV HYPOTHETICAL HOST RANGE 27.4 KD VACCINIA VIRUS (STRAINWR) 24-58 181-222 PROTEIN PYL15_ADE41 HYPOTHETICAL BKRF4 PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 16-58 (HUMAN HERPESVIRUS 4) PYLR2_EBVHYPOTHETICAL 12.4 KD PROTEIN IN HUMAN ADENOVIRUS TYPE 41 39-81 33 KDPROTEIN PYOR1_COYMV HYPOTHETICAL BLRF2 PROTEIN EPSTEIN-BARR VIRUS(STRAIN B95-8)  64-125 (HUMAN HERPESVIRUS 4) PYOR2_COYMV HYPOTHETICAL 23KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS  94-147 (COYMV) PYOR2_LELVHYPOTHETICAL 15 KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 33-77 (COYMV)PYOR3_TTV1 HYPOTHETICAL 28.4 KD PROTEIN LELYSTAD VIRUS (LV) 100-134PYOR5_ADEG1 HYPOTHETICAL 6.9 KD PROTEIN THERMOPROTEUS TENAX VIRUS 114-54 (STRAIN KRA1) (TTV1) PYORA_TTV1 HYPOTHETICAL 31.5 KD PROTEIN AVIANADENOVIRUS GAL1  70-127 (STRAIN PHELPS) (FOWL ADENOVIRU PYORD_TTV1HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 21-67 (STRAINKRA1) (TTV1) PYORE_TTV1 HYPOTHETICAL 15.4 KD PROTEIN THERMOPROTEUS TENAXVIRUS 1  6-51  89-130 (STRAIN KRA1) (TTV1) PYORL_TTV1 HYPOTHETICAL 15.3KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  78-122 (STRAIN KRA1) (TTV1)PYORQ_TTV1 HYPOTHETICAL 26.8 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 1-45 (STRAIN KRA1) (TTV1) PYORT_TTV1 HYPOTHETICAL 7.3 KD PROTEINTHERMOPROTEUS TENAX VIRUS 1  1-43 (STRAIN KRA1) (TTV1) PYORW_TTV1HYPOTHETICAL 38.7 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1  4-38 281-315(STRAIN KRA1) (TTV1) PYP12_RTBV HYPOTHETICAL 12.1 KD PROTEINTHERMOPROTEUS TENAX VIRUS 1  4-89 (STRAIN KRA1) (TTV1) PYP12_RTBVPHYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS (RTBV) 33-72PYP24_RTBV HYPOTHETICAL P12 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 33-72(ISOLATE PHILIPPINES) (RTB PYP24_RTBVP HYPOTHETICAL P24 PROTEIN RICETUNGRO BACILLIFORM VIRUS (RTBV)  51-101 106-157 PYP46_RTBV HYPOTHETICALP24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS  51-101 106-157 (ISOLATEPHILIPPINES) (RT PYP46_RTBVP HYPOTHETICAL P46 PROTEIN RICE TUNGROBACILLIFORM VIRUS (RTBV)  49-111 197-231 PYP63_NPVAC HYPOTHETICAL P46PROTEIN RICE TUNGRO BACILLIFORM VIRUS  49-111 197-231 (ISOLATEPHILIPPINES) (RT PYP7A_TNVA HYPOTHETICAL PROTEIN IN P6.5 5′REGIONAUTOGRAPHA CALIFORNICA NUCLEAR 32-73 POLYHEDROSIS VIRUS ( PYPOH_NPVACHYPOTHETICAL P7A PROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) (TNV)  1-65PYPOL_IPNVJ HYPOTHETICAL 23.6 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR116-153 IN POLYHEDRIN 5 POLYHEDROSIS VIRUS ( PYQ1_AMEPV HYPOTHETICAL17.3 KD PROTEIN INFECTIOUS PANCREATIC NECROSIS VIRUS 25-66 (SEROTYPEJASPER) PYQ3_AMEPV HYPOTHETICAL 7.6 KD PROTEIN AMSACTA MOOREIENTOMOPOXVIRUS (AMEPV)  9-61 IN TK 5′REGION PYRF2_HSV6G HYPOTHETICALPROTEIN IN TK 3′REGION AMSACTA MOOREI ENTOMOPOXVIRUS (AMEPV)  1-57 62-96149-183 PYRF3_HSV6G HYPOTHETICAL PROTEIN RF2 HERPES SIMPLEX VIRUS (TYPE6/STRAIN GS) 193-264 PYRF4_HSV6G HYPOTHETICAL PROTEIN RF3 HERPES SIMPLEXVIRUS (TYPE 6/STRAIN GS) 134-175 PYRP2_IRV6 HYPOTHETICAL PROTEIN RF4HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 252-286 404-442 PYRR1_EBVREPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS (CIV)  1-45 (INSECTIRIDESCENT VIRUS TYP PYSR1_EBV HYPOTHETICAL BRRF1 PROTEIN EPSTEIN-BARRVIRUS (STRAIN B95-8)  96-130 (HUMAN HERPESVIRUS 4) PYTR1_EBVHYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  98-177(HUMAN HERPESVIRUS 4) PYUB2_NPVOP HYPOTHETICAL BTRF1 PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 390-424 (HUMAN HERPESVIRUS 4)PYVAC_VACCC HYPOTHETICAL 24.0 KD PROTEIN ORGYIA PSEUDOTSUGATAMULTICAPSID 25-69 170-204 IN UBIQUITIN 3′RE POLYHEDROSIS VIRUSPYVAG_VACCC HYPOTHETICAL 14.4 KD PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 29-63 PYVAH_VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN)  3-37 PYVAN_VACCC HYPOTHETICAL 14.5 KD PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN)  78-112 PYVBH_VACCC HYPOTHETICAL 7.9KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 23-57 PYVCC_VACCCHYPOTHETICAL 7.4 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  5-39PYVDB_VACCC HYPOTHETICAL 9.2 KD PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 11-48 PYVDB_VACCV HYPOTHETICAL 8.5 KD PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN) 29-80 PYVDC_VACCV HYPOTHETICAL 8.5 KD PROTEINVACCINIA VIRUS (STRAIN WR) 46-80 PYVGB_VACCC HYPOTHETICAL 7.3 KD PROTEINVACCINIA VIRUS (STRAIN WR)  7-41 PYVHA_VACCC HYPOTHETICAL 8.4 KD PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN) 10-51 HYPOTHETICAL 8.1 KD PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN)  9-53

TABLE VI 107 X 178 X 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL VIRAL(NON-BACTERIOPHAGE) PROTEINS PCGENE 107x178x4 All Viruses (nobacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA5 AREA 6 AREA 7 AREA 8 AREA 9 P194K_TRVSY POT 194 KD PRO TOBACCO RATTLEVIRUS (STRAIN SYM) 387-414 1087- 1142- 1114 1169 PAANT_HDVAM DELTAANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAANT_HDVD3DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133PAANT_HDVTT DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATE AMERICAN)106-133 PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTA VIRUS (ISOLATEAMERICAN) 106-133 PAANT_HDVS1 DELTA ANTIGEN HEPATITIS DELTA VIRUS(ISOLATE AMERICAN) 16-43 106-133 PAANT_HDVS2 DELTA ANTIGEN HEPATITISDELTA VIRUS (ISOLATE AMERICAN) 16-43 106-133 PAANT_HDVWO DELTA ANTIGENHEPATITIS DELTA VIRUS (ISOLATE AMERICAN) 106-133 PAT3H_FOWPMANTITHROMBIN-III HOMOLOG FOWLPOX VIRUS (ISOLATE HP-438 [MUNICH]) 72-106PAT11_VACCV 94 KD A-TYPE INCLUSION PRO VACCINIA VIRUS (STRAIN WR) 14-5667-94 424-472 570-625 PAT11_VARV 81 KD A-TYPE INCLUSION PRO VARIOLAVIRUS 67-94 425-504 571-605 PAT12_HSV11 ALPHA TRANS-IND FACTOR 78 HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 308-335 KD PRO PAT12_HSV1F ALPHATRANS-IND FACTOR 77 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 308-335 KDPRO PAT12_HSVEB ALPHA TRANS-IND FACTOR 82 EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 294-321 KD PRO PATIN_HSVEB ALPHA TRANS-IND PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN AB4P) 255-289 PATI_COWPX A-TYPE INCLUSIONPROTEIN COWPOX VIRUS 14-56 67-94 426-498 572-620 837-841 934-990 1234-1261 PBZLF_EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN B95-8)193-220 PROTEIN PCAHH_VACCC CELL SURFACE-BINDING VACCINIA VIRUS (STRAINCOPENHAGEN) 84-111 117-144 PROTEIN PCAHH_VACCV CELL SURFACE-BINDINGVACCINIA VIRUS (STRAIN WR) 84-111 117-144 PROTEIN PCAHH_VARV CELLSURFACE-BINDING VARIOLA VIRUS 84-111 117-144 PROTEIN PCELF_HSVEB CELLFUSION PROTEIN EQUINE HERPESVIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4Pand Ky A) PCGH2_HSVSA CYCLIN HOMOLOG HERPESVIRUS SAIMIRI (STRAIN 11)127-154 PCOA1_POVHA COAT PROTEIN VP1 HAMSTER POLYOMAVIRUS 159-186PCOA2_BFDV COAT PROTEIN VP2 BUDGERIGAR FLEDGLING DISEASE VIRUS 160-187PCOA2_POVBO COAT PROTEIN VP2 BOVINE POLYOMAVIRUS 49-76 PCOA2-POVJC COATPROTEIN VP2 POLYOMAVIRUS JC 37-64 PCOA2_POVLY COAT PROTEIN VP2LYMPHOTROPIC POLYOMAVIRUS 170-204 PCOA2_POVMK COAT PROTEIN VP2 MOUSEPOLYOMAVIRUS (STRAIN KILHAM) 22-49 PCOA2_SV40 COAT PROTEIN VP2 SIMIANVIRUS 40 178-205 PCOA3_AAV2 PROBABLE COAT PROTEIN 3 ADENO-ASSOCIATEDVIRUS 2 120-147 PCOA3-TTV1 COAT PROTEIN TP3 THERMOPROTEUS TENAS VIRUS 1(STRAIN KRA1) 3-30 PCOAT_ADVG COAT PROTEIN VP1 ALEUTIAN MINK DISEASEPARVOVIRUS 194-221 (STRAIN G) PCOAT_BLRV COAT PROTEIN BEAN LEAFROLLVIRUS 96-123 PCOAT_CAMVC COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAINCM-184) 63-90 193-220 461-488 PCOAT_CAMVD COAT PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN D/H) 64-91 194-221 PCOAT_CAMVE COAT PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN BBC) 63-90 193-220 PCOAT_CAMVN COATPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 63-90 192-219 461-488PCOAT_CAMVS COAT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 64-91 194-221STRASBOURG) PCOAT_CARMV COAT PROTEIN CARNATION MOTTLE VIRUS 16-43PCOAT_CHVP1 MAJOR CAPSID PROTEIN PARAMECIUM BURSARIA CHLORELLA VIRUS 141-86 PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 328-362 PCOAT_CSMVCOAT PROTEIN CHLORIS STRIATE MOSAIC VIRUS 62-89 PCOAT_CYMV COAT PROTEINCLOVER YELLOW MOSAIC VIRUS 170-200 PCOAT_FCVC6 COAT PROTEIN FELINECALICIVIRUS (STRAIN CFI/68 FIV) 566-600 PCOAT_FCVF4 COAT PROTEIN FELINECALICIVIRUS (STRAIN JAPANESE F4) 516-543 566-600 PCOAT_FCVF9 COATPROTEIN FELINE CALICIVIRUS (STRAIN F9) 519-546 569-603 PCOAT_FMVDPROBABLE COAT PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 220-247 358-385PCOAT_LSV COAT PROTEIN LILY SYMPTOMLESS VIRUS 32-700 246-273 PCOAT_MISVCOAT PROTEIN MISCANTHUS STREAK VIRUS 139-166 PCOAT_ORSV COAT PROTEINODONTOGLOSSUM RINGSPOT VIRUS 106-133 PCOAT_PAVHB PROBABLE COAT PROTEINVP1 HUMAN PARVOVIRUS B19 524-551 569-596 PCOAT_POPMV COAT PROTEIN POPLARMOSAIC VIRUS (ISOLATE ATCC PV275) 46-73 PCOAT_SOCMV COAT PROTEIN SOYBEANCHLOROTIC MOTTLE VIRUS 128-162 PCOAT_TAMV GENOME POLYPROTEIN TAMARILLOMOSAIC VIRUS 21-48 PCOAT_TAV COAT PROTEIN TOMATO ASPERMY VIRUS 23-50PCOAT_TBSVB COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN BS-3) 3-3041-68 PCOAT_TBSVC COAT PROTEIN TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY)97-134 PCOAT_TCV COAT PROTEIN TURNIP CRINKLE VIRUS 232-259 PCOAT_TMGMVCOAT PROTEIN TOBACCO MILD GREEN MOSAIC VIRUS 104-131 PCOAT_TMV COATPROTEIN TOBACCO MOSAIC VIRUS (VULGARE) 104-131 PCOAT_TMVCO COAT PROTEINTOBACCO MOSAIC VIRUS (STRAIN COWPEA) 78-132 PCOAT_TMVDA COAT PROTEINTOBACCO MOSAIC VIRUS (STRAIN DAHLEMENSE) 104-131 PCOAT_TMVER COATPROTEIN TOBACCO MOSAIC VIRUS (STRAIN ER) 104-131 PCOAT_TMVO COAT PROTEINTOBACCO MOSAIC VIRUS (STRAIN O AND KOKUBU) 104-131 PCOAT_TMVOM COATPROTEIN TOBACCO MOSAIC VIRUS (STRAIN OM) 104-131 PCOAT_TMVTO COATPROTEIN TOBACCO MOSAIC VIRUS (STRAIN TOMATO/L) 104-131 PCOAT_TNVA COATPROTEIN TOBACCO NECROSIS VIRUS (STRAIN A) 90-117 PCOAT_TRVPS COATPROTEIN TOBACCO RATTLE VIRUS (STRAINS PSG and PLB) 118-145 PCOAT_TYDVACOAT PROTEIN TOBACCO YELLOW DWARF VIRUS (STRAIN 10-37 AUSTRALIA)PCOAT_TYMV COAT PROTEIN TURNIP YELLOW MOSAIC VIRUS 41-68 PCOAT_TYMVACOAT PROTEIN TURNIP YELLOW MOSAIC VIRUS (AUSTRALIAN 41-68 ISOLATE)PDNB2_ADE07 EARLY E2A DNA-BINDING HUMAN ADENOVIRUS TYPE 7 46-73 PROTEINPDNBI_EBV MAJOR DNA-BINDING PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)997-1004 1041- 1068 PDNBI_HCMVA MAJOR DNA-BINDING PROTEIN HUMANCYTOMEGALOVIRUS (STRAIN AD169) 437-464 PDNBI_HSVSA MAJOR DNA-BINDINGPROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 333-368 512-539 PDNBI_MCMVSMAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 584-618PDNBI_POVJC DNA-BINDING PROTEIN POLYOMAVIRUS JC 2-29 PDNBI_SCMVC MAJORDNA-BINDING PROTEIN SIMIAN CYTOMEGALOVIRUS (STRAIN COLBURN) 435-462532-559 PDNLI_VACCC DNA LIGASE VACCINIA VIRUS (STRAIN COPENHAGEN)104-131 172-199 358-385 PDNLI_VACCV DNA LIGASE VACCINIA VIRUS (STRAINWR) 104-131 172-199 358-385 PDNLI_VARV DNA LIGASE VARIOLA VIRUS 104-131172-199 358-385 PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12403-431 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS ENTOMOPOXVIRUS23-64 202-240 PDPOL_CHVN2 DNA POLYMERASE CHLORELLA VIRUS NY-2A 338-365PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA CHLORELLA VIRUS 1 338-365PDPOL_FOWPV DNA POLYMERASE FOWLPOX VIRUS 17-51 370-416 621-655 772-799PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 753-780PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS (BROWN SHANGHAI 5-39DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITIS B VIRUS(STRAIN CHINA) 5-39 PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS(WHITE SHANGHAI 5-39 304-331 DUCK ISOLATE S31) PDPOL_HPBGS DNAPOLYMERASE GROUND SQUIRREL HEPATITIS VIRUS 271-325 PDPOL_HPBHE DNAPOLYMERASE HERON HEPATITIS B VIRUS 5-39 PDPOL_HPBVP DNA POLYMERASEHEPATITIS B VIRUS 456-483 (SUBTYPE ADW/STRAIN PHILIPPINO/PFDW294)PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE ADYW) 443-470PDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPESVIRUS 1 328-366 710-737PDPOL_HSVSA DNA POLYMERASE HERPESVIRUS SAIMIRI (STRAIN 11) 625-652PDPOL_NPVAC DNA POLYMERASE AUTOGRAPHA CALIFONICA NUCLEAR 598-643POLYHEDROSIS VIRUS PDPOL_NPVLD DNA POLYMERASE LYMANTRIA DISPARMULTICAPSID NUCLEAR 357-384 POLYHEDROSIS VIRUS PDPOL_VACCC DNAPOLYMERASE VACCINIA VIRUS (STRAIN COPENHAGEN) 770-797 PDPOL_VACCV DNAPOLYMERASE VACCINIA VIRUS (STRAIN WR) 770-797 PDPOL_VARV DNA POLYMERASEVARIOLA VIRUS 769-796 PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITISVIRUS 1 285-326 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 59290-331 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7 212-242290-331 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 211-241289-330 PDPOL_WHV81 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 212-242290-331 PDTXH_CORBE DIPHTH TOXIN HOMOLOG CORYNEPHAGE BETA 516-533 CRM228PREC PDTX_CORBE DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE BETA 523-560PDTX_COROM DIPHTHERIA TOXIN PRECURSOR CORYNEPHAGE OMEGA 516-533PDUT_HSVE4 DEOXYU 5′-TRIPHOSPH EQUINE HERPESVIRUS TYPE 4 (STRAIN 1942)90-117 NUCHYDROLASE PDUT_HSVSA DEOXYU 5′-TRIPHOSPH HERPESVIRUS SAIMIRI(STRAIN 11) 179-213 NUCHYDROLASE PE1BL_ADE07 E1B PROTEIN, LARGE HUMANADENOVIRUS TYPE 7 126-153 T-ANTIGEN PE1BL_ADE40 E1B PROTEIN, LARGE HUMANADENOVIRUS TYPE 40 136-163 T-ANTIGEN PE1BS_ADE12 E1B PROTEIN, SMALLHUMAN ADENOVIRUS TYPE 12 3-30 T-ANTIGEN PE1BS_ADEM1 E1B PROTEIN, SMALLMOUSE ADENOVIRUS TYPE 1 122-173 T-ANTIGEN PE314_ADE02 EARLY E3B 14 KDPROTEIN HUMAN ADENOVIRUS TYPE 2 2-29 PE314_ADE07 EARLY E3 15.3 KDPROTEIN HUMAN ADENOVIRUS TYPE 7 21-48 PE320_ADE03 EARLY E3 20.1 KD HUMANADENOVIRUS TYPE 3 5-32 70-100 GLYCOPROTEIN PE320_ADE35 EARLY E3 20.3 KDHUMAN ADENOVIRUS TYPE 35 70-107 GLYCOPROTEIN PE321_ADE35 EARLY E3 20.6KD HUMAN ADENOVIRUS TYPE 35 125-161 GLYCOPROTEIN PE3GL_ADEM1 EARLY E317.7 KD MOUSE ADENOVIRUS TYPE1 38-66 GLYCOPROTEIN PEAR_EBV EARLY ANTIGENPROTEIN R EPSTEIN-BARR VIRUS (STRAIN B95-8) 55-82 PEFT1_VARV EARLY TRANSFACTOR 70 KD VARIOLA VIRUS 307-341 470-497 SUBUNIT PENV_AVIRE ENVPOLYPROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 420-468 PENV_AVISN ENVPOLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 6-33 426-474 PENV_BAEVM ENVPOLYPROTEIN BABOON ENDOGENOUS VIRUS (STRAIN M7) 395-452 PENV_BIV06 ENVPOLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44 544-603 631-695 (ISOLATE106) PENV_BIV27 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 17-44573-632 660-724 (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIAVIRUS (AMERICAN 304-377 ISOLATE FLK) PENV_BLVAU ENV POLYPROTEIN BOVINELEUKEMIA VIRUS (AUSTRALIAN 304-377 ISOLATE) PENV_BLVAV ENV POLYPROTEINBOVINE LEUKEMIA VIRUS (AMERICAN) 304-377 ISOLATE VDM) PENV_BLVB2 ENVPOLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 311-377 ISOLATE LB285)PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (BELGIUM 304-377ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS (JAPANESE304-377 ISOLATE BLV-1) PENV_CAEVG ENV POLYPROTEIN CAPRINE ARTHRITISENCEPHALITIS VIRUS 165-192 (STRAIN G63) PENV_EIAV1 ENV POLYPROTEINEQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONE P3.2-1) PENV_EIAV2 ENVPOLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-695 (CLONE P3.2-2)PENV_EIAV3 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (CLONEP3.2-3) PENV_EIAV5 ENV POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS669-696 (CLONE P3.2-5) PENV_EIAV9 ENV POLYPROTEIN EQUINE INFECTIOUSANEMIA VIRUS 668-712 (CLONE 1369) PENV_EIAVC ENV POLYPROTEIN EQUINEINFECTIOUS ANEMIA VIRUS 668-712 (CLONE CL22) PENV_EIAVW ENV POLYPROTEINEQUINE INFECTIOUS ANEMIA VIRUS 668-712 (STRAIN WSU5) PENV_EIAVY ENVPOLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 668-712 (ISOLATE WYOMING)PENV_FENV1 ENV POLYPROTEIN FELINE ENDOGENOUS VIRUS ECE1 33-60 517-544PENV_FIVPE ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE650-680 722-749 PETALUMA) PENV_FIVSD ENV POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS (ISOLATE 639-668 720-747 SAN DIEGO) PENV_FIVT2ENV POLYPROTEIN FELINE IMMUNODEFICIENCY VIRUS (ISOLATE 640-679 721-748TM2) PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS (CLONE CFE-6)509-538 PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS (STRAINA/GLASGOW-1) 490-519 PENV_FLVLB ENV POLYPROTEIN FELINE LEUKEMIA VIRUS(STRAIN LAMBDA-B1) 510-539 PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIAVIRUS (STRAIN SARMA) 487-516 PENV_FOAMV ENV POLYPROTEIN HUMANSPUMARETROVIRUS 14-41 318-355 866-893 PENV_FSVGA ENV POLYPROTEIN FELINESARCOMA VIRUS (STRAIN 510-539 GARDNER-ARNSTEIN) PENV_FSVGB ENVPOLYPROTEIN FELINE SARCOMA VIRUS (STRAIN GA) 490-519 PENV_FSVSM ENVPOLYPROTEIN FELINE SARCOMA VIRUS (STRAIN SM) 493-522 PENV_GALV ENVPOLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203 523-564 PENV_HTL1A ENVPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376 (STRAIN ATK)PENV_HTL1C ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE I 342-376(CARIBBEAN ISOLATE) PENV_HTL1M ENV POLYPROTEIN HUMAN T-CELL LEUKEMIAVIRUS TYPE I 342-376 (ISOLATE MT-2) PENV_HTLV2 ENV POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS TYPE II 336-370 PENV_HV1A2 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 544-592 630-682 790-825 (ARV2/SF2 ISOLATE)PENV_HV1B1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594631-683 791-818 (BH10 ISOLATE) PENV_HV1B8 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 540-589 626-678 786-813 (BH8 ISOLATE)PENV_HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 267-294338-365 562-590 628-679 787-815 (BRAIN ISOLATE) PENV_HV1BR ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 550-599 636-688 796-823(BRU ISOLATE) PENV_HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 397-424 557-606 643-695 803-835 (CDC-451 ISOLATE) PENV_HV1EL ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 386-413 543-591628-680 (ELI ISOLATE) PENV_HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 545-594 631-683 791-818 (HXB2 ISOLATE) PENV_HV1H3 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818(HXB3 ISOLATE) PENV_HV1J3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 350-377 556-605 642-694 802-829 (JH3 ISOLATE) PENV_HV1JR ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 336-363 622-675 783-811(JRCSF ISOLATE) PENV_HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 274-301 555-596 637-677 776-824 (STRAIN KB-1-GP32) PENV_HV1MA ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 547-595 633-707 794-826(MAL ISOLATE) PENV_HV1MF ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 543-592 629-681 789-816 (MFA ISOLATE) PENV_HV1MN ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-370 567-595 632-684 791-819 (MNISOLATE) PENV_HV1N5 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1326-360 (NEW YORK-5 ISOLATE) PENV_HV1ND ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 249-290 536-583 621-673 783-813 (NDKISOLATE) PENV_HV1OY ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1544-593 630-704 789-820 (OYI ISOLATE) PENV_HV1PV ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 545-594 631-683 791-818 (PV22 ISOLATE)PENV_HV1RH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 280-307351-378 554-602 640-692 800-832 (RF/HAT ISOLATE) PENV_HV1S1 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 333-363 536-585 622-674782-809 (SF162 ISOLATE) PENV_HV1S3 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 541-589 627-679 787-815 (SF33 ISOLATE)PENV_HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 338-365545-593 631-683 (SC ISOLATE) PENV_HV1W1 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 338-365 545-593 631-683 791-818 (WMJ1ISOLATE) PENV_HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1334-361 536-584 622-674 782-809 (WMJ2 ISOLATE) PENV_HV1Z2 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 255-296 542-591 628-680790-820 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 251-292 (ZAIRE 3 ISOLATE) PENV_HV1Z6 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 256-297 545-593 630-682792-822 (ZAIRE 6 ISOLATE) PENV_HV1Z8 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 266-307 573-601 634-678 797-828 (Z-84ISOLATE) PENV_HV1ZH ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1545-594 627-666 791-823 (ZAIRE HZ321 ISOLATE) PENV_HV2BE ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 532-591 621-648 653-697(ISOLATE BEN) PENV_HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 534-593 623-650 655-699 (ISOLATE CAM2) PENV_HV2D1 ENV POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88 523-550 555-582 644-688(ISOLATE D194) PENV_HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 60-87 524-551 556-583 613-640 645-693 (ISOLATE GHANA-1)PENV_HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 61-88524-551 556-583 613-640 662-689 (ISOLATE N1H-Z) PENV_HV2RO ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 58-85 533-592 622-698(ISOLATE ROD) PENV_HV2S2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 442-476 527-554 559-586 648-682 (ISOLATE ST/24 1C#2) PENV_HV2SBENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 557-584 614-673(ISOLATE SBL1SY) PENV_HV2ST ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 442-476 527--554 559-586 648-692 (ISOLATE ST) PENV_MCFF ENVPOLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA 473-512 VIRUSPENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING MURINE LEUKEMIA488-515 VIRUS (ISOLATE C1-3) PENV_MLVAV ENV POLYPROTEIN AKV MURINELEUKEMIA VIRUS 517-544 PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINELEUKEMIA VIRUS 510-539 PENV_MLVF5 ENV POLYPROTEIN FRIEND MURINE LEUKEMIAVIRUS (ISOLATE 57) 523-553 PENV_MLVFF ENV POLYPROTEIN FRIEND MURINELEUKEMIA VIRUS (ISOLATE FB29) 523-553 PENV_MLVFP ENV POLYPROTEIN FRIENDMURINE LEUKEMIA VIRUS (ISOLATE 523-553 PVC-211) PENV_MLVHO ENVPOLYPROTEIN HOMULV MURINE LEUKEMIA VIRUS 510-540 PENV_MLVK1 ENVPOLYPROTEIN KIRSTEN MURINE LEUKEMIA VIRUS 40-81 PENV_MLVMO ENVPOLYPROTEIN MOLONEY MURINE LEUKEMIA VIRUS 502-543 PENV_MLVRD ENVPOLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 497-538 PENV_MLVRK ENVPOLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS (STRAIN 497-538 KAPLAN)PENV_MMTVB ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6)458-485 562-589 PENV_MMTVG ENV POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS(STRAIN GR) 458-485 562-589 PENV_MPMV ENV POLYPROTEIN SIMIANMASON-PFIZER VIRUS 422-470 PENV_MSVFB ENV POLYPROTEIN FBJ MURINEOSTEOSARCOMA VIRUS 57-84 PENV_OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS(STRAIN SA-OMVV) 42-69 196-223 780-807 PENV_RMCFV ENV POLYPROTEINRAUSCHER MINK CELL FOCUS-INDUCING VIRUS 487-517 PENV_SFV1 ENVPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 14-41 866-901 PENV_SFV3L ENVPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 3/STRAIN LK3) 18-45 319-357 673-700863-898 PENV_SIVA1 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (AGM155269-310 561-588 592-619 652-679 697-724 ISOLATE) PENV_SIVAG ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS (AGM3 270-301 566-593 597-624658-685 703-730 ISOLATE) PENV_SIVAI ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 257-291 336-372 548-603 634-708 (ISOLATEAGM/CLONE GR1-1) PENV_SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 3-30 268-298 590-617 651-678 (TYO-1 ISOLATE) PENV_SIVCZ ENVPOLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 160-187 253-289 336-366526-584 627-654 PENV_SIVGB ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS8-35 158-185 589-650 784-816 (ISOLATE GB1) PENV_SIVM1 ENV POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 120-150 550-609 671-715 (MM142-83 ISOLATE)PENV_SIVM2 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 156-215 277-289(MM251 ISOLATE) PENV_SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS553-608 (K6W ISOLATE) PENV_SIVML ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 549-608 (K78 ISOLATE) PENV_SIVS4 ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 281-308 553-612 642-669 691-718 (F236/SMH4ISOLATE) PENV_SIVSP ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS286-313 554-595 646-722 (PBJ/BC13 ISOLATE) PENV_SMRVH ENV POLYPROTEINSQUIRREL MONKEY RETROVIRUS (SMRV-H) 400-462 PENV_SRV1 ENV POLYPROTEINSIMIAN RETROVIRUS SRV-1 409-471 PENV_VILV ENV POLYPROTEIN VISNALENTIVIRUS (STRAIN 1514) 22-62 773-800 PENV_VILV1 ENV POLYPROTEIN VISNALENTIVIRUS 22-62 780-807 (STRAIN 1514/CLONE LV1-1KS1) PENV_VILV2 ENVPOLYPROTEIN VISNA LENTIVIRUS 22-62 782-809 (STRAIN 1514/CLONE LV1-1KS2)PETF1_FOWP1 EARLY TRANS FACTOR FOWLPOX VIRUS (STRAIN FP-1) 190-224 70 KDSUBUNIT PETF1_SFVKA EARLY TRANS FACTOR SHOPE FIBROMA VIRUS (STRAINKASZA) 306-340 469-496 550-587 70 KD SUBUNIT PETF1_VACCC EARLY TRANSFACTOR VACCINIA VIRUS (STRAIN COPENHAGEN) 307-341 470-497 70 KD SUBUNITPETF1_VACCV EARLY TRANS FACTOR VACCINIA VIRUS (STRAIN WR) 307-341470-497 70 KD SUBUNIT PETF2_VACCC EARLY TRANSCRIPTION VACCINIA VIRUS(STRAIN COPENHAGEN) 66-97 174-210 302-332 FACTOR 82 PETF2_VARV EARLYTRANSCRIPTION VARIOLA VIRUS 66-97 174-210 302-332 FACTOR 82 PEXON_VZVDALKALINE EXONUCLEASE VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 109-139PFIB2_ADE40 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 179-237PFIB2_ADE41 41.4 KD FIBER PROTEIN HUMAN ADENOVIRUS TYPE 41 178-216PFIBP_ADE02 FIBER PROTEIN HUMAN ADENOVIRUS TYPE 2 308-335 PFIBP_ADE40FIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 324-351 446-473 PFIBP_ADE41 FIBERPROTEIN HUMAN ADENOVIRUS TYPE 41 339-366 461-488 PFIBP_ADEB3 FIBERPROTEIN BOVINE ADENOVIRUS TYPE 3 118-145 164-191 PFIBP_ADEM1 FIBERPROTEIN MOUSE ADENOVIRUS TYPE 1 275-305 325-352 PFOSX_MSVFR V-FOS/FOXTRANSFORMING FBR MURINE OSTEOSARCOMA VIRUS 138-169 PROTEIN PFOS_AVINKP55-V-FOS TRANSFORMING AVIAN RETROVIRUS NK24 116-147 PROTEIN PFOS_MSVFBP55-V-FOS TRANSFORMING FBJ MURINE OSTEOSARCOMA VIRUS 162-193 PROTEINPGAG_AVISN GAG POLYPROTEIN AVIAN SPLEEN NECROSIS VIRUS 270-297PGAG_EIAVY GAG POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 144-171(ISOLATE WYOMING) PGAG_FOAMV GAG POLYPROTEIN HUMAN SPUMARETROVIRUS621-648 PGAG_GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442447-474 PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 191-118 (ARV2/SF2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 91-118 (JH3 ISOLATE) PGAG_HV1MN GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 87-118 (MN ISOLATE)PGAG_HV2BE GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115(ISOLATE BEN) PGAG_HV2D1 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 88-115 (ISOLATE D194) PGAG_HV2NZ GAG POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE NIH-Z) PGAG_HV2ST GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 88-115 (ISOLATE ST)PGAG_IPHA RETROVIRUS-RELATED GAG HAMSTER INTRACISTERNAL A-PARTICLE270-297 POLYPROTEI PGAG_IPMA RETROVIRUS-RELATED GAG MOUSE INTRACISTERNALA-PARTICLE 33-60 69-103 232-259 POLYPROTEI PGAG_IPMAE RETROVIRUS-RELATEDGAG MOUSE INTRACISTERNAL A-PARTICLE 96-130 POLYPROTEI PGAG_MMTVB GAGPOLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 84-151 156-187PGAG_MMTVC GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 84-116PGAG_MMTVG GAG POLYPROTEIN MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 84-151156-187 PGAG_MPMV GAG POLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV)222-260 PGAG_SCVLA MAJOR COAT PROTEIN SACCHAROMYCES CEREVISIAE VIRUS L-A497-531 624-651 PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS473-507 (ISOLATE AGM/CLONE GR1-1) PGAG_SIVMK GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 88-115 (K6W ISOLATE) PGAG_SIVMS GAG POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 88-115 (STM ISOLATE) PGAG_SIVS4 GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115 (F236/SMH4 ISOLATE)PGAG_SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 88-115(PBJ/BC13 ISOLATE) PGAG_SMSAV GAG POLYPROTEIN SIMIAN SARCOMA VIRUS397-443 PGAG_SRV1 GAG POLYPROTEIN SIMIAN RETROVIRUS SRV-1 223-261PHELI_HSVEB PROBABLE HELICASE EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)184-211 321-348 PHELI_HSVSA PROBABLE HELICASE HERPESVIRUS SAIMIRI(STRAIN 11) 418-449 PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS(STRAIN DUMAS) 490-517 701-728 PHEMA_CVBF HEMAGGLUTININ-ESTERASE BOVINECORONAVIRUS (STRAIN F15) 208-242 PRECURSOR PHEMA_CVBLYHEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN LY-138) 208-242PRECURSOR PHEMA_CVBM HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAINMEBUS) 208-242 PRECURSOR PHEMA_CVBQ HEMAGGLUTININ-ESTERASE BOVINECORONAVIRUS (STRAIN QUEBEC) 208-242 PRECURSOR PHEMA_CVHOCHEMAGGLUTININ-ESTERASE HUMAN CORONAVIRUS (STRAIN OC43) 208-242 PRECURSORPHEMA_IAA1C HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAINA/A1CH1/2/68) 387-453 PHEMA_IABAN HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 24-51 371-437 A/BANGKOK/1/79 PHEMA_IABUD HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/BUDGERIGAR/HOKKAIDO/1/77)PHEMA_IACAO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 9-36A/CAMEL/MONGOLIA/82) PHEMA_IACKA HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 381-451 A/CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 31-58 382-441 494-528A/CHICKEN/GERMANY/N/49) PHEMA_IACKP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 396-426 A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 396-426A/CHICKEN/PENNSYLVANIA/1370/83) PHEMA_IACKV HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 119-146 384-443 A/CHICKEN/VICTORIA/1/85)PHEMA_IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451A/DUCK/ALBERTA/28/76) PHEMA_IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 423-453 499-543 A/DUCK/ALBERTA/60/76) PHEMA_IADA3HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453A/DUCK/ALBERTA/78/76) PHEMA_IADA4 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 29-56 418-478 A/DUCK/ALBERTA/35/76) PHEMA_IADCZHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 21-55 402-453 506-533 A/DUCK/ENGLAND/1/56) PHEMA_IADH1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/8/80) PHEMA_IADH3 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/33/80)PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/21/82) PHEMA_IADH6 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/DUCK/HOKKAIDO/9/85)PHEMA_IADH7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 371-437A/DUCK/HOKKAIDO/10/85) PHEMA_IADIR HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 415-445 A/DUCK/IRELAND/113/83) PHEMA_IADM2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 21-56 A/DUCK/MEMPHIS/546/76)PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453A/DUCK/MEMPHIS/928/74) PHEMA_IADMA HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 31-58 A/DUCK/MANITOBA/1/53) PHEMA_IADNY HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 21-55 A/DUCK/NEW YORK/12/78)PHEMA_LDNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 381-451A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU1 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 21-55 A/DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 387-453 A/DUCK/UKRAINE/1/63)PHEMA_IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 24-51A/ENGLAND/878/69) PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 40-67 387-453 A/ENGLAND/321/77) PHEMA_IAFPR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 177-221 384-442 A/FOWL PLAGUEVIRUS/ROSTOCK/34) PHEMA_IAGRE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 381-451 A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 505-432 A/GULL/MARYLAND/704/77)PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 504-531A/GULL/ASTRAKHAN/227/84) PHEMA_IAHAL HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 386-452 A/EQUINE/ALGIERS/72) PHEMA_IAHAR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/HARBIN/1/88) 29-56 PHEMA_IAHC6HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/CAMBRIDGE/1/73) PHEMA_IAHCDHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457A/EQUINE/C.DETROIT/1/64) PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/DETROIT/1/64) PHEMA_IAHFOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452A/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 386-452 A/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-452A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLE HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 29-56 194-221 388-457 A/EQUINE/LEXINGTON/1/66) PHEMA_IAHLOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457A/EQUINE/LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 386-452 A/EQUINE/MIAMI/1/63) PHEMA_IAHNM HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/NEW MARKET/76)PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56194-221 388-457 A/EQUINE/NEW MARKET/1/77) PHEMA_IAHPR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 194-221 388-457A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 386-452 A/EQUINE/ROMANIA/80) PHEMA_IAHSA HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/SANTIAGO/1/85)PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56194-221 388-457 A/EQUINE/SAO PAULO/1/76) PHEMA_IAHSW HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN) 29-56 194-221 388-457A/EQUINE/SWITZERLAND/137/72 PHEMA_IAHTE HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 386-452 A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 386-455A/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 386-452 A/EQUINE/URUGUAY/1/63) PHEMA_IAJAP HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 196-223 A/JAPAN/305/57) PHEMA_IAKIEHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 425-478A/KIEV/59/79) PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 29-56 425-478 A/LENINRAD/54/1) PHEMA_IAMAA HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 380-450 A/MALLARD/ASTRAKHAN/244/82)PHEMA_IAMAB HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 385-455A/MALLARD/ASTRAKHAN/263/82) PHEMA_IAMAO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 387-453 A/MALLARD/NEW YORK/6874/78)PHEMA_IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67387-453 A/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 40-67 387-453 A/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 24-51 371-437 A/MEMPHIS/6/86)PHEMA_IAMIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 31-58382-441 A/MINK/SWEDEN/84) PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 387-453 A/NT/60/68) PHEMA_IAP1L HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 505-534 A/PILOT WHALE/MAINE/328/84)PHEMA_IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56425-478 A/PUETRO RICO/8/34) PHEMA_IAQU7 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 24-51 A/QU/7/70) PHEMA_IARUD HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 381-451 A/RUDDY TURNSTONE/NEWJERSEY/47/85) PHEMA_IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN 381-451 A/SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 28-56 160-187 506-547A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 119-146 384-443 A/STARLING/VICTORIA/5156/85) PHEMA_IATA1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/TAIWAN/1/86)PHEMA_IATK1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 415-445A/TURKEY/IRELAND/1378/83) PHEMA_IATKM HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 381-451 A/TURKEY/MINNESOTA/833/80) PHEMA_IATKOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 507-534A/TURKEY/ONTARIO/7732/66) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 424-454 493-539 A/TURKEY/ONTARIO/6118/68) PHEMA_IATKRHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 32-62 194-221 381-422A/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 419-449 500-536 A/TURKEY/WISCONSIN/1/66) PHEMA_IATRAHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 21-55A/TERN/AUSTRALIA/G70C/75) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN 40-67 387-453 A/UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/USSR/90/77) 29-56 425-478PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 41-68388-454 A/VICOTRIA/3/75) PHEMA_IAWIL HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 424-477 A/WILSON-SMITH/33) PHEMA_IAXIA HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 29-56 A/XIANFENG/3/89) PHEMA_IAZCOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 40-67 387-453A/SWINE/COLORADO/1/77) PHEMA_IAZH2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN 371-437 A/SWINE/HONG KONG/81/78) PHEMA_IAZH3 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN 371-437 A/SWINE/HONG KONG/126/82)PHEMA_IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 418-478506-547 A/SWINE/INDIANA/1726/88) PHEMA_IAZNJ HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN 418-478 506-547 A/SWINE/NEW JERSEY/11/76)PHEMA_IAZUK HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN 387-453A/SWINE/UKKEL/1/84) PHEMA_INBBE HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN B/BEIJING/1/87) 400-431 439-483 PHEMA_INBBO HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAINB/BONN/43) 390-421 429-473PHEMA_INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429437-481 B/ENGLAND/222/82) PHEMA_INBHK HEMAGGLUTININ PRECURSOR INFLUENZAB VIRUS (STRAIN 391-418 429-473 B/HONG KONG/8/73) PHEMA_INBLEHEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/LEE/40) 399-430438-482 PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN389-420 428-472 B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININ PRECURSORINFLUENZA B VIRUS (STRAIN 393-424 432-476 B/MEMPHIS/6/86) PHEMA_INBORHEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 398-429 437-481B/OREGON/5/80) PHEMA_INBSI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS(STRAIN 398-429 437-481 B/SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN 391-422 430-474 B/USSR/100/83)PHEMA_INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN 393-424432-476 B/VICTORIA/3/85) PHEMA_INBVK HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN 400-431 439-483 B/VICTORIA/2/87) PHEMA_INCCA HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN 495-571 C/CALIFORNIA/78) PHEMA_INCENHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 483-559C/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS(STRAIN 483-559 C/GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN 482-558 C/HYOGO/1/83) PHEMA_INCJHHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN 496-572C/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS 482-558 (STRAIN C/KYOTO/41/82) PHEMA_INCM1 HEMAGGLUTININ PRECURSORINFLUENZA C VIRUS 482-558 (STRAIN C/MISSISSIPPI/80) PHEMA_INCNAHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 482-558 (STRAIN C/NARA/82)PHEMA_INCP1 HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAINC/PIG/BEIJING/10/81) PHEMA_INCP2 HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS 483-559 (STRAIN C/PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS 483-559 (STRAIN C/PIG/BEIJING/439/82)PHEMA_INCTA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS 483-559 (STRAINC/TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS483-559 (STRAIN C/YAMAGATA/1081) PHEMA_NDVA HEMAGGLUTININ- NEWCASTLEDISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN AUSTRALIA-VICTORIA/32)PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE(STRAIN BEAUDETTE C/45) PHEMA_NDVD HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS 64-91 NEURAMINIDASE (STRAIN D26/76) PHEMA_NDVH HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN B1-HITCHNER/47)PHEMA_NDVI HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE(STRAIN ITALIEN/45) PHEMA_NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS64-91 NEURAMINIDASE (STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE (STRAIN QUEENSLAND/66)PHEMA_NDVTG HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 64-91 NEURAMINIDASE(STRAIN TEXAS G.B./48) PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS64-91 NEURAMINIDASE (STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ-PHOCINE DISTEMPER VIRUS 39-66 46-73 NEURAMINIDASE PHEMA_PI1HWHEMAGGLUTININ- HUMAN PARAINFLUENZA 1 VIRUS 79-110 366-393 NEURAMINIDASE(STRAIN WASHINGTON/1957) PHEMA_PI3B HEMAGGLUTININ- BOVINE PARAINFLUENZA3 VIRUS 66-93 NEURAMINIDASE PHEMA_PI3H4 HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN NIH 47885) PHEMA_PI3HAHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAINAUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS27-76 NEURAMINIDASE (STRAIN TEX/545/80) PHEMA_PI3HU HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 23-70 NEURAMINIDASE (STRAIN TEX/9305/82)PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61NEURAMINIDASE (STRAIN TEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 27-61 NEURAMINIDASE (STRAIN WASH/641/79)PHEMA_PI3HX HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 27-61NEURAMINIDASE (STRAIN WASH/1511/73) PHEMA_RACVI HEMAGGLUTININ PRECURSORRACCOON POXVIRUS 166-214 256-283 PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS(STRAIN Z/HOST MUTANTS) 79-106 NEURAMINIDASE PHEMA_SENDF HEMAGGLUTININ-SENDAI VIRUS (STRAIN FUSHIMI) 79-106 NEURAMINIDASE PHEMA_SENDHHEMAGGLUTININ- SENDAI VIRUS (STRAIN HARRIS) 79-106 NEURAMINIDASEPHEMA_SENDJ HEMAGGLUTININ- SENDAI VIRUS (STRAIN HVJ) 79-106NEURAMINIDASE PHEMA_SENDZ HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z) 79-106NEURAMINIDASE PHEMA_SV41 HEMAGGLUTININ- SIMIAN VIRUS 41 22-52 394-421NEURAMINIDASE PHEMA_VACCC HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAINCOPENHAGEN) 119-146 175-202 216-243 PHEMA_VACCI HEMAGGLUTININ PRECURSORVACCINIA VIRUS (STRAIN IHD-J) 109-146 175-202 216-243 PHEMA_VACCTHEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN TIAN TAN) 119-146 175-202216-243 PHEMA_VACCV HEMAGGLUTININ PRECURSOR VACCINIA VIRUS (STRAIN WR)109-146 175-202 215-242 PHEMA_VARV HEMAGGLUTININ PRECURSOR VARIOLA VIRUS111-148 177-211 214-244 PHEX9_ADE02 HEXON-ASSOCIATED PROTEIN HUMANADENOVIRUS TYPE 2 100-134 PHEX9_ADE05 HEXON-ASSOCIATED PROTEIN HUMANADENOVIRUS TYPE 5 100-134 PHEX9_ADE07 HEXON-ASSOCIATED PROTEIN HUMANADENOVIRUS TYPES 3 and 7 97-127 PHEX9_ADE02 HEXON PROTEIN HUMANADENOVIRUS TYPE 2 146-173 359-386 433-460 PHEX9_ADE05 HEXON PROTEINHUMAN ADENOVIRUS TYPE 5 348-375 PHEX9_ADE40 HEXON PROTEIN HUMANADENOVIRUS TYPE 40 396-423 PHEX9_ADEB3 HEXON PROTEIN BOVINE ADENOVIRUSTYPE 3 305-338 PHI38_COWPX HEMORRHAGE-INDUCING COWPOX VIRUS 28-55 38 KDPROTEIN PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 462-489 PI196_ASFB7LATE PROTEIN I196L AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 12-43PI226_ASFB7 LATE PROTEIN I226R AFRICAN SWINE FEVER VIRUS (STRAIN BA71V)113-147 PIBMP_CAMV4 INCLUSION BODY MATRIX CAULIFLOWER MOSAIC VIRUS(STRAIN D4) 17-44 PROTEIN PIBMP_CMAVD INCLUSION BODY MATRIX CAULIFLOWERMOSAIC VIRUS (STRAIN D/H) 17-44 PROTEIN PIBMP_CAMVP INCLUSION BODYMATRIX CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 38-410 PROTEIN PIBMP_CERVINCLUSION BODY MATRIX CARNATION ETCHED RING VIRUS 6-33 PROTEINPIBMP_FMVD INCLUSION BODY MATRIX FIGWORT MOSAIC VIRUS (STRAIN DXS)372-407 PROTEIN PIBMP_SOCMV INCLUSION BODY MATRIX SOYBEAN CHLOROTICMOTTLE VIRUS 3-48 331-358 PROTEIN PIC18_HCMVA PROB PROC & TRANSPORTHUMAN CYTOMEGALOVIRUS (STRAIN AD169) 294-324 PRO UL56 PIC18_HSVSAPROBABLE PROC & TRANSPORT HERPESVIRUS SAIMIRI (STRAIN 11) 58-85 482-522PRO PIC18_MCMVS PROB PROC & TRANSPORT MURINE CYTOMEGALOVIRUS (STRAINSMITH) 661-691 PRO PIE63_HSV11 TRANSCRIPTIONAL REGULATOR HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 248-275 IE63 PIE68_HSV11 IMMEDIATE-EARLYPROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 40-67 IE68 PIE68_HSVSAIMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 48-78PIR05_HCMVA HYPOTHETICAL PROTEIN IRL5 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 22-49 PIR12_HCMVA HYPOTHETICAL PROTEIN IRL12 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 74-162 PIR13_HCMVA HYPOTHETICAL PROTEINIRL13 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 31-62 PKFES_FSVGA TYROSINEKINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 106-150 PROTEIN FESGARDNER-ARNSTEIN) PKFGR_FSVGR TYROSINE KINASE TRANSF FELINE SARCOMAVIRUS (STRAIN 218-252 PROTEIN FGR GRADNER-RASHEED) PKFMS_FSVMD FMSTYROSINE KINASE TRANSF FELINE SARCOMA VIRUS (STRAIN 327-362 PROTEINMCDONOUGH) PKFPS_FUJSV TYROSINE KINASE TRANSF FUJINAMI SARCOMA VIRUS155-243 349-397 PROTEIN FPS PKITH_AMEPV THYMIDINE KINASE AMSACTA MOOREIENTOMOPOXVIRUS 47-84 PKITH_CAPVK THYMIDINE KINASE CAPRIPOXVIRUS (STRAINKS-1) 41-68 PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI (STRAIN 11)340-386 PKITH_ILTVT THYMIDINE KINASE INFECTIOUS LARYNGOTRACHEITIS VIRUS334-361 (STRAIN THORNE V882) PKR74_HSVI1 GENE 74 PROTEIN KINASEICTALURID HERPESVIRUS 1 491-518 PKRB1_VACCC 30 KD PROTEIN KINASEVACCINIA VIRUS (STRAIN COPENHAGEN) 141-168 HOMOLOG PKRB1_VACCV 30 KDPROTEIN KINASE VACCINIA VIRUS (STRAIN WR) 141-168 HOMOLOG PKRB2_VACCCPOSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STRAIN COPENHAGEN) 147-174PKRB2_VACCV POSSIBLE PROTEIN KINASE B12 VACCINIA VIRUS (STAIN WR)147-174 PKRF1_VARV POSSIBLE PROTEIN KINASE F10 VARIOLA VIRUS 47-74PNCAP_VHSVO NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC SEPTICEMIA VIRUS(STRAIN 07-71) 284-314 PKROS_AVISU ROS TYROSINE KINASE AVIAN SARCOMAVIRUS (STRAIN UR2) 111-138 TRANSF PROTEIN PKRYK_AVIR3 TYROSINE KINASETRANSF AVIAN RETROVIRUS RPL30 22-49 PROTEIN RYK PKYES_AVISY TYROSINEKINASE TRANSF AVIAN SARCOMA VIRUS (STRAIN Y73) 199-233 PROTEIN YESPL100_ADE02 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 2 386-413PL100_ADE05 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 5 386-413PL100_ADE40 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 40 191-231PL100_ADE41 LATE 100 KD PROTEIN HUMAN ADENOVIRUS TYPE 41 206-233PLMP1_EBV LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAIN B95-8)148-175 PLMP1_EBVC LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS (STRAINCAO) 148-175 PLMP1_EBVR LATENT MEMBRANE PROTEIN 1 EPSTEIN-BARR VIRUS(STRAIN RAJI) 148-175 PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS(STRAIN B95-8) 294-321 PMCEL_SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMAVIRUS (STRAIN KASZA) 54-156 289-316 497-524 622-656 LARGE SUBUNIPMCEL_VACCC MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN COPENHAGEN)85-112 291-318 630-657 LARGE SUBUNI PMCEL_VACCV MRNA CAPPING ENZYME,VACCINIA VIRUS (STRAIN WR) 85-112 291-318 630-657 LARGE SUBUNIPMCEL_VARV MRNA CAPPING ENZYME, VARIOLA VIRUS 85-112 291-318 630-657LARGE SUBUNI PMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS(STRAIN BA71V) 279-313 PMOVP_CGMVS MOVEMENT PROTEIN CUCUMBER GREENMOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAIN W) PMOVP_CGMVW MOVEMENTPROTEIN CUCUMBER GREEN MOTTLE MOSAIC VIRUS 170-197 (WATERMELON STRAINSH) PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT VIRUS 53-90PMOVP_TOMVA MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LIIA) 46-80PMOVP_TOMVL MOVEMENT PROTEIN TOMATO MOSAIC VIRUS (STRAIN LII) 46-80PMTC1_CHVN1 MODIFICATION METHYLASE CHLORELLA VIRUS NC-1A 143-170 229-256CVIBI PMTC2_CHVP1 MODIFICATION METHYLASE PARAMECIUM BURSARIA CHLORELLAVIRUS 1 4-31 130-172 CVIAII PMYC_AVIM2 MYC TRANSFORMING PROTEIN AVIANMYELOCYTOMATOSIS VIRUS CMII 232-266 375-402 PMYC_AVIMC MYC TRANSFORMINGPROTEIN AVIAN MYELOCYTOMATOSIS VIRUS MC29 232-267 376-403 PMYC_AVIMD MYCTRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS VIRUS HBI 232-267 376-403PMYC_AVIME MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS MH2E21 239-268377-404 PMYC_AVIOK MYC TRANSFORMING PROTEIN AVIAN RETROVIRUS OK10227-261 370-397 PMYC_FLV MYC TRANSFORMING PROTEIN FELINE LEUKEMIA VIRUS393-420 PMYC_FLVTT MYC TRANSFORMING PROTEIN FELINE LEUKEMIA PROVIRUS FTT393-420 PNCAP_BEV NUCLEOCAPSID PROTEIN BERNE VIRUS 49-76 129-156PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE 85-112 PNCAP_BUNSHNUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 96-123 PNCAP_BUNYWNUCLEOCAPSID PROTEIN BUNYAMWERA VIRUS 48-75 189-220 PNCAP_CCHFVNUCLEOCAPSID PROTEIN CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS 223-271(ISOLATE C68031) PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS(STRAIN 140-174 ONDERSTEPOORT) PNCAP_CHAV NUCLEOCAPSID PROTEINCHANDIPURA VIRUS (STRAIN 1653514) 40-74 PNCAP_CVCAE NUCLEOCAPSID PROTEINCANINE ENTERIC CORONAVIRUS (STRAIN K378) 191-227 PNCAP_CVPPUNUCLEOCAPSID PROTEIN PORCINE TRANSMISSIBLE GASTROENTERITIS 191-227CORONAVIRUS (STRAIN PURD PNCAP_CVPR8 NUCLEOCAPSID PROTEIN PORCINERESPIRATORY CORONAVIRUS 191-227 (STRAIN 86/137004/BRITISH ISOLATPNCAP_CVPRM NUCLEOCAPSID PROTEIN PORCINE RESPIRATORY CORONAVIRUS 191-227(STRAIN RM4) PNCAP_DUGBV NUCLEOCAPSID PROTEIN DUGBE VIRUS 238-265PNCAP_FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUS PERITONITIS VIRUS182-209 (STRAIN 79-1146) PNCAP_HAZVJ NUCLEOCAPSID PROTEIN HAZARA VIRUS(ISOLATE JC280) 6-33 256-283 PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMANRESPIRATORY SYNCYTIAL VIRUS 4-31 74-108 112-141 (SUBGROUP B/STRAIN18537) PNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY SYNCYTIALVIRUS 4-31 (STRAIN A2) PNCAP_LASSG NUCLEOCAPSID PROTEIN LASSA VIRUS(STRAIN GA391) 64-99 147-174 PNCAP_LASSJ NUCLEOCAPSID PROTEIN LASSAVIRUS (STRAIN JOSIAH) 64-99 467-504 PNCAP_LYCVA NUCLEOCAPSID PROTEINLYMPHOCYTIC CHORIOMENINGITIS VIRUS 64-97 (STRAIN ARMSTRONG) PNCAP_MAGVNUCLEOCAPSID PROTEIN MAGUARI VIRUS 41-68 192-219 PNCAP_MOPEINUCLEOCAPSID PROTEIN MOPEIA VIRUS 64-99 PNCAP_PI1HC NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 377-404 455-482 PNCAP_PI1HWNUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 377-404 444-488 (STRAINWASHINGTON/1957) PNCAP_PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3VIRUS 376-403 (STRAIN N1H) 47885 PNCAP_PTPV NUCLEOCAPSID PROTEIN PUNTATORO PHLEBOVIRUS 3-30 PNCAP_PUUMH NUCLEOCAPSID PROTEIN PUUMALA VIRUS(STRAIN HALLNAS B1) 2-29 PNCAP_PUUMS NUCLEOCAPSID PROTEIN PUUMALA VIRUS(STRAIN SOTKAMO) 2-29 PNCAP_PVM NUCLEOCAPSID PROTEIN PNEUMONIA VIRUS OFMICE 93-120 PNCAP_RABVA NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1)133-167 PNCAP_RABVP NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN PV)133-167 PNCAP_RABVS NUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN SAD B19)133-167 PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/HOSTMUTANTS) 363-404 PNCAP_SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAINENDERS) 363-404 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z)363-404 PNCAP_SFSV NUCLEOCAPSID PROTEIN SANDFLY FEVER SICILIAN VIRUS4-31 PNCAP_SV41 NUCLEOCAPSID PROTEIN SIMIAN VIRUS 41 507-534 PNCAP_TACVNUCLEOCAPSID PROTEIN TACARIBE VIRUS 50-77 PNCAP_TOSV NUCLEOCAPSIDPROTEIN TOSCANA VIRUS 6-33 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMIVIRUS 68-102 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGICSEPTICEMIA VIRUS 284-314 (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEINVIRAL HEMORRHAGIC SEPTICEMIA VIRUS 149-176 284-314 (STRAIN MAKAH)PNCAP_VSVIG NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS (SEROTYPE)56-83 INDIANA/STRAIN GLASGOW PNCAP_VSVJO NUCLEOCAPSID PROTEIN VESICULARSTOMATITIS VIRUS (SEROTYPE 67-94 338-365 NEW) JERSEY/STRAIN OGDENPNCAP_VSVSJ NUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 56-83(STRAIN SAN JUAN) PNEF_HV1EL NEGATIVE FACTOR HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 81-119 (ELI ISOLATE) PNEF_HV1ND NEGATIVE FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1 81-119 (NDK ISOLATE) PNEF_HV1Z6 NEGATIVEFACTOR HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 82-124 (ZAIRE 6 ISOLATE)PNEF_SIVAI NEGATIVE FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 96-137 (ISOLATEAGM/CLONE GRI-1) PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN47-81 A/BLACK DUCK/AUSTRALIA/702/78) PNRAM_IACAO NEURAMINIDASE INFLUENZAA VIRUS (STRAIN 33-64 A/CAMEL/MONGOLIA/82 PNRAM_IACHI NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/CHILE/1/83) 16-43 50-91 PNRAM_IADA1NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 51-81 A/DUCK/ALBERTA/28/76)PNRAM_IADGE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 21-48A/DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN10-48 52-80 197-224 A/FOWL PLAGUE VIRUS/WEYBRIDGE) PNRAM_IAHCONEURAMINIDASE INFLUENZA A VIRUS (STRAIN 197-224 386-413A/EQUINE/COR/16/74) PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN5-44 46-76 364-400 A/EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 50-81 PNRAM_IALEN NEURAMINIDASEINFLUENZA A VIRUS (STRAIN 50-81 A/LENINGRAD/54/1) PNRAM_IAME1NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 16-43 50-81A/MEMPHIS/1/71H-A/BELLAMY/42N) PNRAM_IAPAR NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 15-43 50-81 A/PARROT/ULSTER/73) PNRAM_IAPUE NEURAMINIDASEINFLUENZA A VIRUS (STRAIN 16-43 A/PUERTO RICO/8/34) PNRAM_IARUENEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-88 A/RUDDY TURNSTONE/NEWJERSEY/60/85) PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 49-82A/TERN/AUSTRALIA/G70C/75) PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/USSR/90/77) 50-81 PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 49-88 A/WHALE/MAINE/1/84) PNRAM_IAWIL NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 16-43 A/WILSON-SMITH/33) PNRAM_INBLE NEURAMINIDASEINFLUENZA B VIRUS (STRAIN B/LEE/40) 4-35 PNS1_SIDEV PROB NONSTRUC PROBOMBYX DENSONUCLEOSIS VIRUS 283-310 PRECURSOR PNS2_SIDEV PROB NONSTRUCPRO BOMBYX DENSONUCLEOSIS VIRUS 42-69 PRECURSOR PNSS_INSVNNON-STRUCTURAL PROTEIN IMPATIENS NECROTIC SPOT VIRUS 95-122 (STRAINNL-07) PNSS_TSWVB NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILT VIRUS 5-32432-462 (BRAZILIAN ISOLATE CPNH1/BR-01) PNSS_TSWVL NON-STRUCTURALPROTEIN TOMATO SPOTTED WILT VIRUS (STRAIN L3) 5-32 PNTP1_AMEPVNUCLEOSIDE TRIPHOS- AMSACTA MOOREI ENTOMOPOXVIRUS 28-69 PHATASE IPNTP1_CBEPV NUCLEOSIDE TRIPHOS- CHORISTONEURA BIENNIS ENTOMOPOXVIRUS122-166 347-374 524-551 PHATASE I PNTP1_VACCC NUCLEOSIDE TRIPHOS-VACCINIA VIRUS (STRAIN COPENHAGEN) 65-92 394-421 514-587 PHATASE IPNTP1_VACCV NUCLEOSIDE TRIPHOS- VACCINIA VIRUS (STRAIN WR) 65-92 394-421514-587 PHATASE I PNTP1_VARV NUCLEOSIDE TRIPHOS- VARIOLA VIRUS 300-327420-447 455-493 PHATASE I PP100_HSV6U MAJOR ANTIGENIC STRUCTL HERPESSIMPLEX VIRUS (TYPE 6/STRAIN 81-108 189-216 688-715 785-812 PROTEINUGANDA-1102) PPAP1_VACCC POLY(A) POL CATALYTIC VACCINIA VIRUS (STRAINCOPENHAGEN) 88-115 SUBUNIT PPAP1_VACCV POLY(A) POL CATALYTIC VACCINIAVIRUS (STRAIN WR) 88-115 SUBUNIT PPAP1_VARV POLY(A) POL CATALYTICVARIOLA VIRUS 88-115 SUBUNIT PPAP2_CAPVK POLY(A) POL REG SUBUNITCARPRIPOXVIRUS (STAIN KS-1) 118-145 PPAP2_FOWPV POLY(A) POL REG SUBUNITFOWLPOX VIRUS 27-54 PPE12_NPVAC 12.1 KD PROTEIN IN PE AUTOGRAPHACALIFORNICA NUCLEAR 61-105 5′REGION POLYHEDROSIS VIRUS PPE12_NPVOP 11.5KD PROTEIN IN P26 ORGYIA PSEUDOTSUGATA MULTICAPSID 61-95 5′REGIONPOLYHEDROSIS VIRUS PPE38_NPVAC MAJOR IMMEDIATE EARLY AUTOGRAPHACALIFORNICA NUCLEAR 204-248 PROTEIN POLYHEDROSIS VIRUS PPE48_NPVAC 48.3KD IN PE-P26 AUTOGRAPHA CALIFORNICA NUCLEAR 4-38 51-78 INTERGENIC REGIONPOLYHEDROSIS VIRUS PPEN3_ADEGX PENTON PROTEIN AVIAN ADENOVIRUS GAL10(STRAIN SA2) 96-123 PPOL1_BAYMG GENOME POLYPROTEIN 1 BARLEY YELLOWMOSAIC VIRUS 1272- 1775- 2236- (GERMAN ISOLATE) 1299 1802 2263PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 1774- 2234-(JAPANESE STRAIN II-1) 1801 2261 PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIANGRAPEVINE CHROME 481-508 1909- MOSAIC VIRUS 1941 PPOL1_GFLV RNA1POLYPROTEIN GRAPEVINE FANLEAF VIRUS 170-197 636-677 958-985 1161- 1195PPOL1_TBRVS RNA1 POLYPROTEIN TOMATO BLACK RING VIRUS (STRAIN S) 1096-1123 PPOL2_BAYMG GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 240-281801-828 (GERMAN ISOLATE) PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOWMOSAIC VIRUS 240-267 801-828 (JAPANESE STRAIN II-1) PPOL2_GCMV RNA2POLYPROTEIN HUNGARIAN GRAPEVINE CHROME MOSAIC VIRUS 11-38 PPOL2_GFLVRNA2 POLYPROTEIN GRAPEVINE FANLEAF VIRUS 549-576 PPOL2_TRSVR RNA2POLYPROTEIN TOMATO RINGSPOT VIRUS 982- (ISOLATE RASPBERRY) 1009PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27) 17-441030- 1145- 1057 1172 PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRALDIARRHEA VIRUS (ISOLATE NADL) 629-660 1082- 1303- 2233- 2476- 2609-3613- 1112 1330 2261 2503 2636 3642 PPOLG_BVDVS GENOME POLYPROTEINBOVINE VIRAL DIARRHEA VIRUS (STRAIN SD-1) 1303- 2143- 2519- 2802- 3523-1333 2171 2546 2829 3550 PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOWMOSAIC VIRUS 96-123 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIE VIRUS A21(STRAIN COE) 7-43 664-694 1062- 1900- 1099 1930 PPOLG_COXA9 GENOMEPOLYPROTEIN COXSACKIE VIRUS A9 (STRAIN GRIGGS) 1040- 1076 PPOLG_COXB1GENOME POLYPROTEIN COXSACKIE VIRUS B1 645-672 841-868 1021- 1057PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIE VIRUS B3 1024- 1881- 1060 1908PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIE VIRUS B4 644-673 1022- 1058PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIE VIRUS B5 1024- 1060 PPOLG_CYVVGENOME POLYPROTEIN CLOVER YELLOW VEIN VIRUS 120-154 PPOLG_DEN1S GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN SINGAPORE 1858- 2890- 2989-S275/90) 1885 2935 3016 PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE2 (STRAIN 16681) 1544- 1858- 2908- 2982- 3117- 1571 1885 2935 3016 3147PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 16681-PDK53)1544- 1858- 2485- 2908- 2982- 3117- 1571 1885 2519 2935 3016 3147PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA)1544- 1858- 2908- 3117- 3346- 1571 1885 2935 3147 3373 PPOLG_DEN2PGENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN PR159/S1) 1544- 1858-2905- 2979- 3114- 3343- 1571 1885 2932 3013 3144 3370 PPOLG_DEN2T GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974) 1134- 1448- 11611475 PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 837-864 1542-1857- 2494- 2980- 3345- 1569 1884 2521 3014 3372 PPOLG_DEN4 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 4 2885- 2977- 3342- 2930 3011 3369PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY) 213-249PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-018 1484-1522- 1518 1563 PPOLG_EMCVB GENOME POLYPROTEIN ENCEPHALOMYOCARDITISVIRUS 70-97 1486- 1524- (STRAIN EMC-B NONDIABETOGENIC) 1520 1565PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS 70-97 1486-1524- (STRAIN EMC-D DIABETOGENIC) 1520 1565 PPOLG_ENMG3 GENOMEPOLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 70-108 (STRAIN 37A)PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCARDITIS VIRUS 3-41PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 302-3291119- (STRAIN A10-61) 1146 PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTHDISEASE VIRUS 301-328 1119- (STRAIN A12) 1146 PPOLG_FMDVO GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 1119- (STRAINS O1K AND O1BFS)1146 PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS 101-128(STRAIN C1-SANTA PAU [C-58]) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE 1) 702-729 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERAVIRUS (STRAIN ALFORT) 699-726 1195- 1303- 1434- 3068- 3406- 1232 13331461 3095 3440 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAINBRESCIA) 699-726 1195- 3068- 3406- 3532- 1232 3095 3440 3559 PPOLG_HCVBKGENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE BK) 702-729 1045- 1072PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE H) 702-7291045- 1072 PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATEHC-J6) 374-401 2089- 2116 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE HC-J8) 1049- 2089- 1076 2116 PPOLG_HCVJA GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE JAPANESE) 378-405 702-729 1045-1072 PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-JT)702-729 1045- 1072 PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE TAIWAN) 702-729 1045- 1072 PPOLG_HPAV2 GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 24A) 203-237 1021- 1117- 1454- 1048 1149 1481PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C) 203-2371021- 1117- 1454- 1048 1149 1481 PPOLG_HPAV8 GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 18F) 203-237 1021- 1117- 1454- 1048 1149 1481PPOLG_HPAVC GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN CR326) 203-237PPOLG_HPAVG GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN GA76) 182-216PPOLG_HPAVH GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN HM-175) 203-2371021- 1103- 1048 1149 PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN LA) 203-237 1021- 1103- 1048 1149 PPOLG_HPAVM GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN MBB) 203-237 1021- 1103- 1048 1149 PPOLG_HPAVSGENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS (STRAIN AGM-27) 207-2411025- 1115- 1052 1192 PPOLG_HPAVT GENOME POLYPROTEIN SIMIAN HEPATITIS AVIRUS (STRAIN CY-145) 203-237 PPOLG_HRV14 GENOME POLYPROTEIN HUMANRHINOVIRUS 14 17-44 559-586 652-679 1877- 1904 PPOLG_HRV1B GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 1B 1132- 1855- 1159 1882 PPOLG_HRV2 GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 2 1125- 1552- 1152 1593 PPOLG_HRV89 GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 89 883-910 1141- 1566- 1862- 1168 1607 1889PPOLG_HUEV7 GENOME POLYPROTEIN HUMAN ENTEROVIRUS 70 (STRAIN J670/71)876-910 PPOLG_IBDVO STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSALDISEASE VIRUS 231-277 (STRAIN OH) PPOLG_JAEV1 GENOME PPOLYPROTEINJAPANESE ENCEPHALITIS VIRUS (STRAIN SA-14) 214-248 983- 2796- 1010 2823PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS (STRAIN SA(V)214-248 983- 2796- 1010 2823 PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESEENCEPHALITIS VIRUS (STRAIN 214-248 983- 2796- JAOARS982) 1010 2823PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALAITS VIRUS (STRAIN141-175 911-938 NAKAYAMA) PPOLG_KUNJM GENOME POLYPROTEIN KUNJIN VIRUS(STRAIN MRM61C) 980-1007 PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS(STRAIN TP21) 431-465 1634- 1661 PPOLG_LANVY GENOME POLYPROTEIN LANGATVIRUS (STRAIN YELANTSEV) 431-465 PPOLG_LIV GENOME POLYPROTEIN LOUPINGILL VIRUS 431-465 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS(STRAIN SB 526) 151-185 PPOLG_MCFA GENOME POLYPROTEIN MOSQUITO CELLFUSING AGENT 671-698 3056- 3303- 3083 3330 PPOLG_MDMV GENOME POLYPROTEINMAIZE DWARF MOSAIC VIRUS 10-37 PPOLG_MVEV GENOME POLYPROTEIN MURRAYVALLEY ENCEPHALITIS VIRUS 212-256 PPOLG_OMV GENOME POLYPROTEINORNITHOGALUM MOSAIC VIRUS 24-51 946-973 PPOLG_PEMVC GENOME POLYPROTEINPEPPER MOTTLE VIRUS (CALIFORNIA ISOLATE) 377-404 704-738 831-858 900-9271167- 1485- 1787- 2433- 1201 1512 1814 2464 PPOLG_POL1M GENOMEPOLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN MAHONEY) 1060- 1901- 1100 1931PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUS TYPE 1 (STRAIN SABIN) 670-6971063- 1903- 1101 1933 PPOLG_POL2L GENOME POLYPROTEIN POLIOVIRUS TYPE 2(STRAIN LANSING) 1061- 1901- 1099 1931 PPOLG_POL2W GENOME POLYPROTEINPOLIOVIRUS TYPE 2 (STRAIN W-2) 1061- 1901- 1099 1931 PPOLG_POL32 GENOMEPOLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 1060- 1900- 1098 1930PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS P3/LEON/371060- 1900- AND P3/LEON N12A[1]B) 1098 1930 PPOLG_PPVD GENOMEPOLYPROTEIN PLUM POX POTYVIRUS (STRAIN D) 921-948 1498- 2771- 948 15252798 PPOLG_PPVEA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAIN EL AMAR)1146- 1187 PPOLG_PPVNA GENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATENAT) 920-947 1497- 2770- 1524 2800 PPOLG_PPVRA GENOME POLYPROTEIN PLUMPOX POTYVIRUS (STRAIN RANKOVIC) 920-947 1497- 2770- 1524 2797PPOLG_PRSVH GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAIN P/MUTANTHA) 500-527 PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS (STRAINP/MUTANT HA 5-1) 391-418 PPOLG_PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOTVIRUS (STRAIN W) 489-516 PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNEMOSAIC VIRUS (STRAIN DPD1) 271-315 1132- 1510- 1177 1537 PPOLG_PVYCGENOME POLYPROTEIN POTATO VIRUS Y (STRAIN C) (PVY) 433-460 701-735PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN) 218-245433-460 701-735 1486- 1777- 1513 1811 PPOLG_PVYN GENOME POLYPROTEINPOTATA VIRUS Y (STRAIN N) 433-460 701-735 1486- 1777- 1513 1811PPOLG_PVYO GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN O) 433-460 701-735PPOLG_PYFV1 GENOME POLYPROTEIN PARSNIP YELLOW FLECK VIRUS (ISOLATEP-121) 1124- 2707- 1151 2734 PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANEMOSAIC VIRUS (STRAIN SC) 10-37 PPOLG_SVDVH GENOME POLYPROTEIN SWINEVESICULAR DISEASE VIRUS 1024- (STRAIN H/3 ′76) 1060 PPOLG_SVDVU GENOMEPOLYPROTEIN 1024-1060 PPOLG_TBEVS GENOME POLYPROTEIN TICK-BORNEENCEPHALITIS VIRUS 87-121 234-272 1632- 2265- 2909- (STRAIN SOFJIN) 16612292 2936 PPOLG_TBEVW GENOME POLYPROTEIN BORNE ENCEPHALATIS VIRUS 1632-(WESTERN SUBTYPE) 1659 PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS845-872 1148- 1416- 1773- 1175 1443 1800 PPOLG_TMEVB GENOME POLYPROTEINTHEILER'S MURINE ENCEPHALOMYELITIS VIRUS 79-117 200-227 (STRAIN BEAN8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITISVIRUS 90-117 200-227 (STRAIN DA) PPOLG_TMEVG GENOME POLYPROTEINTHEILER'S MURINE ENCEPHALOMYELITIS VIRUS 90-117 200-227 (STRAIN GDVII)PPOLG_TUMV GENOME POLYPROTEIN TURNIP MOSAIC VIRUS 232-262 773-800PPOLG_TVMV GENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 406-433670-704 2708- 2742 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUSII 202-229 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 210-254 3385-3412 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D)436-463 PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAINPASTEUR 17D-204) 436-463 PPOLG_ZYMV GENOME POLYPROTEIN ZUCCHINI YELLOWMOSAIC VIRUS 69-96 PPOLH_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 1(STRAIN MAHONEY) 1063- 1903- 1101 1933 PPOLN_EEVT NON-STRUCTURALVENEZUELAN EQUINE ENCEPHALITIS VIRUS 1402- 1894- POLYPROTEIN (STRAINTRINIDAD DONKEY) 1467 1921 PPOLN_FCVC6 NON-STRUCTURAL FELINE CALICIVRUS(STRAIN CFI/68 FIV) 445-472 POLYPROTEIN PPOLN_FCVF9 NON-STRUCTURALFELINE CALICIVIRUS (STRAIN F9) 1034- POLYPROTEIN 1061 PPOLN_HEVBUNON-STRUCTURAL HEPATITIS E VIRUS (STRAIN BURMA) 219-246 349-376POLYPROTEIN PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN MEXICO)219-246 349-376 POLYPROTEIN PPOLN_HEVMY N-STRUCTURAL HEPATITIS E VIRUS(STRAIN MYANMAR) 219-246 349-376 POLYPROTEIN PPOLN_HEVPA NON-STRUCTURALHEPATITIS E VIRUS (STRAIN PAKISTAN) 218-245 348-375 POLYPROTEINPPOLN_MIDDV NON-STRUCTURAL MIDDELBURG VIRUS 955-982 POLYPROTEINPPOLN_ONNVG NON-STRUCTURAL O′NYONG-NYONG VIRUS (STRAIN GULU) 2453-POLYPROTEIN 2480 PPOLN_RHDV NON-STRUCTURAL RABBIT HEMORRHAGIC DISEASEVIRUS 313-347 1657- POLYPROTEIN 1684 PPOLN_RRVN NON-STRUCTURAL ROSSRIVER VIRUS (STRAIN NB5092) 1057- 1477- 2418- POLYPROTEIN 1084 1504 2445PPOLN_RRVT NON-STRUCTURAL ROSS RIVER VIRUS (STRAIN T48) 146-173 1087-POLYPROTEIN 1114 PPOLN_RUBVT NON-STRUCTURAL RUBELLA VIRUS (STRAINTHERIEN) 2060- POLYPROTEIN 2087 PPOLN_SFV NON-STRUCTURAL SEMLIKI FORESTVIRUS 1154- POLYPROTEIN 1181 PPOLN_SINDO NON-STRUCTURAL SINDBIS VIRUS(SUBTYPE OCKELBO/STRAIN 936-970 POLYPROTEIN EDSBYN 82-5) PPOLN_WEEVNON-STRUCTURAL WESTERN EQUINE ENCEPHALITIS VIRUS 4-31 POLYPROTEINPPOLS_IBDV5 STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS231-258 (STRAIN 52/70) PPOLS_IBDVA STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN AUSTRALIAN 002-73)PPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS231-258 (STRAIN CU-1) PPOLS_IBDVE STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL DISEASE VIRUS 231-258 (STRAIN E) PPOLS_IBDVPSTRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 212-239(STRAIN PBG-98) PPOLS_IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUSBURSAL DISEASE VIRUS 231-258 (STRAIN STC) PPOLS_ONNVG STRUCTURALPOLYPROTEIN O′NYONG-NYONG VIRUS (STRAIN GULU) 356-383 PPOLS_RRVNSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) 939-973PPOLS_RRVT STRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 939-973PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE OCKELBO/STRAIN1138- EDSBYN 82-5) 1165 PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS(STRAINS HRSP AND HRLP) 1138- 1165 PPOLS_WEEV STRUCTURAL POLYPROTEINWESTERN EQUINE ENCEPHALITIS VIRUS 920-947 PPOL_BAEVM POL POLYPROTEINBABOON ENDOGENOUS VIRUS (STRAIN M7) 675-706 715-742 PPOL_CAEVC POLPOLYPROTEIN CAPRINE ARTHRITIS ENCEPHALITIS VIRUS 886-924 (STRAIN CORK)PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 333-360838-865 1075- 1178- 1313- 1102 1205 1347 PPOL_EIAV9 POL POLYPROTEINEQUINE INFECTIOUS ANEMIA VIRUS (CLONE 1369) 472-505 826-853 PPOL_EIAVCPOL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS (CLONE CL22) 472-505826-853 PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS471-504 825-852 (ISOLATE WYOMING) PPOL_FENV1 POL POLYPROTEIN FELINEENDOGENOUS VIRUS ECE1 532-599 627-654 PPOL_FIVPE POL POLYPROTEIN FELINEIMMUNODEFICIENCY VIRUS 442-473 (ISOLATE PETALUMA) PPOL_FMVD ENZYMATICPOLYPROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS) 403-430 PPOL_GALV POLPOLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562 676-703 PPOL_HTL1A POLPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 (STRAIN ATK) 674-712PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 (CARIBBEANISOLATE) 674-712 PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 218-245 620-661 (ARV2/SF2 ISOLATE) PPOL_HV1B1 POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (BH10 ISOLATE)PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257632-673 (BH5 ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 230-257 632-673 (BRU ISOLATE) PPOL_HV1EL POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 624-660 (ELI ISOLATE)PPOL_HV1H2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245620-661 921-951 (HXB2 ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 222-249 624-665 (JRCSF ISOLATE) PPOL_HV1MAPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244 476-510619-660 (MAL ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 221-248 623-664 (MN ISOLATE) PPOL_HV1N5 POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 218-245 625-661 (NEW YORK-5 ISOLATE)PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244624-660 (NDK ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 218-245 620-661 (OYI ISOLATE) PPOL_HV1PV POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 230-257 637-673 (PV22 ISOLATE)PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 217-244619-660 (RF/HAT ISOLATE) PPOL_HV1U4 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 217-244 513-540 619-660 (STRAINUGANDAN/IOSLATE U PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 217-244 619-660 (Z2/CDC-Z34 ISOLATE) PPOL_HV2BE POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582 (ISOLATE BEN)PPOL_HV2CA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562(ISOLATE CAM2) PPOL_HV2D1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 2 509-600 (ISOLATE D194) PPOL_HV2D2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 491-568 (ISOLATE D205,7) PPOL_HV2G1 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 471-562 (ISOLATEGHANA-1) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2471-529 (ISOLATE NIH-Z) PPOL_HV2RO POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 472-563 (ISOLATE ROD) PPOL_HV2SB POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 473-562 (ISOLATE SBLISY)PPOL_HV2ST POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 491-582(ISOLATE ST) PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNALA-PARTICLE 200-227 354-381 461-499 PPOL_IPMA PUTATIVE POL POLYPROTEINMOUSE INTRACISTERNAL A-PARTICLE 211-238 302-329 400-427 PPOL_IPMAIPROBABLE POL POLYPROTEIN MOUSE INTRACISTERNAL A-PARTICLE 130-157 221-248PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS 204-231PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480 PPOL_MLVAVPOL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PPOL_MLVRD POLPOLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 716-743 805-832 PPOL_MLVRKPOL POLYPROTEIN RADIATION MURINE LEUKEMIA VIRUS 101-128 190-217 (STRAINKAPLAN) PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS 574-612670-697 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV)67-94 471-505 873-900 PPOL_RSVP POL POLYPROTEIN ROUS SARCOMA VIRUS(STRAIN PRAGUE C) 797-824 PPOL_RTBV POLYPROTEIN RICE TUNGRO BACILLIFORMVIRUS 7-44 59-93 176-203 202-229 410-437 447-476 1022- 1049 PPOL_RTBVPPOLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 7-44 59-93 176-203 202-229410-437 447-476 1022- (ISOLATE PHILIPPINES) 1049 PPOL_SFV1 POLPOLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 427-454 PPOL_SIVA1 POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 431-458 547-574 637-671(AGM155 ISOLATE) PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 45-72 (AGM266 ISOLATE) PPOL_SIVA3 POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 71-98 (AGM385 ISOLATE) PPOL_SIVAG POL POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 436-463 482-516 642-669 (AGM3 ISOLATE)PPOL_SIVAI POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 478-515(ISOLATE AGM/CLONE GR1-1) PPOL_SIVAT POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 657-691 (TYO-1 ISOLATE) PPOL_SIVCZ POLPOLYPROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 242-269 626-685 (SIV(CPZ))PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 227-254 636-670(ISOLATE GB1) PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS533-560 (MM142-83 ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMIANIMMUNODEFICIENCY VIRUS 533-560 (K6W ISOLATE) PPOL_SIVS4 POL POLYPROTEINSIMIAN IMMUNODEFICIENCY VIRUS 496-523 (F236/SMH4 ISOLATE) PPOL_SIVSP POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 499-526 (PBJ/BC13 ISOLATE)PPOL_SMRVH POL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS (SMRV-H) 601-628PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 268-295348-419 PPOL_SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 578-612670-697 PPOL_VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 490-524881-919 PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/CLONELV1-1KS1) 89-116 490-524 881-919 PPOL_VILV2 POL POLYPROTEIN VISNALENTIVIRUS (STRAIN 1514/CLONE LV1-1KS2) 490-524 881-919 PPR73_MMTVBPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN BR6) 288-315 PPR73_MMTVCPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN C3H) 45-79 PPR73_MMTVGPROTEIN PR73 MOUSE MAMMARY TUMOR VIRUS (STRAIN GR) 167-201 PPYHD_CPVBMPOLYHEDRIN PRECURSOR BOMBYX MORI CYTOPLASMIC POLYHEDROSIS 37-71 VIRUSPPYHD_NPVAC POLYHEDRIN AUTOGRAPHA CALIFORNICA NUCLEAR 13-47 POLYHEDROSISVIRUS PPYHD_NPVAS POLYHEDRIN AGROTIS SEGETUM NUCLEAR POLYHEDROSIS 14-48201-228 VIRUS PPYHD_NPVBM POLYHEDRIN BOMBYX MORI NUCLEAR POLYDEDROSISVIRUS 12-46 PPYHD_NPVBS POLYHEDRIN BUZURA SUPPRESSARIA NUCLEARPOLYHEDROSIS 14-48 VIRUS PPYHD_NPVHC POLYHEDRIN HYPHANTRIA CUNEA NUCLEARPOLYHEDROSIS 13-40 VIRUS PPYHD_NPVLD POLYHEDRIN LYMANTRIA DISPARMULTICAPSID NUCLEAR 14-48 POLYHEDROSIS VIRUS PPYHD_NPVMB POLYHEDRINMAMESTRA BRASSICAE NUCLEAR POLYHEDROSIS 14-48 VIRUS PPYHD_NPVOPPOLYHEDRIN ORGYIA PSEUDOTSUGATA MULTICAPSID 13-47 POLYHEDROSIS VIRUSPPYHD_NPVOS POLYHEDRIN ORGYIA PSEUDOTSUGATA SINGLE CAPSID 14-48 NUCLEARPOLYHEDROSIS VIRUS PPYHD_NPVPF POLYHEDRIN PANOLIS FLAMMEA MULTIPLENUCLEOCAPSID 14-48 POLYHEDROSIS VIRUS PPYHD_NPVSE POLYHEDRIN SPODOPTERAEXIGUA NUCLEAR POLYHEDROSIS 14-48 VIRUS (STRAIN US) PPYHD_NPVSFPOLYHEDRIN SPODOPTERA FRUGIPERDA NUCLEAR 14-48 POLYHEDROSIS VIRUSPREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 41-68 (TYO-1ISOLATE) PREV_VILV REV PROTEIN VISNA LENTIVIRUS (STRAIN 1514) 22-62PRIR1_ASFM2 RIBONUC-DIPHOSPH REDUCT AFRICAN SWINE FEVER VIRUS (ISOLATEMALAWI 7-41 88-119 363-390 LARGE CHA LH 20/1) PRIR1_HCMVARIBONUC-DIPHOSPH REDUCT HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 622-649LARGE CHA PRIR1_HSVEB RIBONUC-DIPHOSPH REDUCT EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 75-102 LARGE CHA PRIR1_HSVSA RIBONUC-DIPHOSPH REDUCTHERPESVIRUS SAIMIRI (STRAIN 11) 324-351 LARGE CHA PRIR1_VACCCRIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN COPENHAGEN) 367-401 LARGECHA PRIR1_VACCV RIBONUC-DIPHOSPH REDUCT VACCINIA VIRUS (STRAIN WR)367-401 LARGE CHA PRIR1_VARV RIBONUC-DIPHOSPH REDUCT VARIOLA VIRUS367-401 LARGE CHA PRIR1_VZVD RIBONUC-DIPHOSPH REDUCT VARICELLA-ZOSTERVIRUS (STRAIN DUMAS) 119-146 LARGE CHA PRIR1_HSVB3 RIBONUC-DIPHOSPHREDUCT BOVINE HERPESVIRUS TYPE 1 (STRAIN 34) 90-117 SMALL CHAPRP94_VACCV RNA-POL-ASSOC TRANS SPEC VACCINIA VIRUS (STRAIN WR) 41-68513-540 FACTOR PRP94_VARV RNA-POL-ASSOC TRANS SPEC VARIOLA VIRUS 41-7577-104 513-540 FACTOR PRPO1_VACCC DNA-DIRECTED RNA POL VACCINIA VIRUS(STRAIN COPENHAGEN) 237-264 587-616 810-837 961-992 147 KD PRPO1_VACCVDNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 237-264 587-616 810-837961-992 1011- 147 KD 1038 PRPO1_VARV DNA-DIRECTED RNA POL VARIOLA VIRUS237-264 587-616 810-837 961-992 147 KD PRPO2_CAPVK DNA-DIRECTED RNA POLCAPRIPOXVIRUS (STRAIN KS-1) 19-65 114-155 132 KD PRPO2_COWPXDNA-DIRECTED RNA POL COWPOX VIRUS 211-241 481-509 132 KD PRPO2_VACCVDNA-DIRECTED RNA POL VACCINIA VIRUS (STRAIN WR) 211-241 481-509 132 KDPRPO2_VARV DNA-DIRECTED RNA POL VARIOLA VIRUS 211-241 481-509 132 KDPRPO4_CAPVK DNA-DIRECTED RNA POL 35 KD CAPRIPOXVIRUS (STRAIN KS-1) 36-63PRPO7_VACCV DNA-DIRECTED RNA POL 19 KD VACCINIA VIRUS (STRAIN WR) 8-3543-70 PRPO7_VARV DNA-DIRECTED RNA POL 19 KD VARIOLA VIRUS 43-70PRPOA_LELV RNA-DIRECTED RNA LELYSTAD VIRUS 1533- POLYMERASE 1560PRPOL_EAV RNA-DIRECTED RNA EQUINE ARTERITIS VIRUS 888-915 1639-POLYMERASE 1673 PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAINA/KOREA/426/68) 575-602 POL SUB P1 PRRP2_IAANN RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60) 119-146 POL SUB P2PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUBP2 A/DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN A/FOWL 119-146 POL SUB P2 PLAGUE VIRUS/ROSTOCK/34) PRRP2_IAGU2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 119-146 POL SUB P2A/GULL/MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS119-146 POL SUB P2 (STRAIN A/EQUINE/LONDON/1416/73) PRRP2_IAHTERNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAINA/EQUINE/TENNESSEE/5/86) PRRP2_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS119-146 POL SUB P2 (STRAIN A/KOREA/426/68) PRRP2_IALE1 RNA-DIRECTED RNAINFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/LENINGRAD/134/57)PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2(STRAIN A/LENINGRAD/134/17/57) PRRP2_IAMAN RNA-DIRECTED RNA INFLUENZA AVIRUS 119-146 POL SUB P2 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP2_IANT6RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAINA/NT/60/68) PRRP2_IAP10 RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POLSUB P2 (STRAIN A/PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNAINFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/PUERTO RICO/8/34)PRRP2_IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2(STRAIN A/RUDDY TURNSTONE/NEW JERSEY/47/85) PRRP2_IASIN RNA-DIRECTED RNAINFLUENZA A VIRUS 119-146 POL SUB P2 (STRAIN A/SINGAPORE/1/57)PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2(STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2_IAVI7 RNA-DIRECTED RNAINFLUENZA A VIRUS 119-146 327-354 POL SUB P2 (STRAIN A/VICTORIA/3/75)PRRP2_IAWIL RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2(STRAIN A/WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA AVIRUS 119-146 POL SUB P2 (STRAIN A/SWINE/HONG KONG/81/78) PRRP2_IAZH3RNA-DIRECTED RNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAINA/SWINE/HONG KONG/126/82) PRRP2_IAZI1 RNA-DIRECTED RNA INFLUENZA A VIRUS119-146 POL SUB P2 (STRAIN A/SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTEDRNA INFLUENZA A VIRUS 119-146 POL SUB P2 (STRAINA/SWINE/TENNESSEE/26/77) PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS157-194 POL SUB P2 (STRAIN B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2_INBADRNA-DIRECTED RNA INFLUENZA B VIRUS 164-194 POL SUB P2 (STRAIN B/ANNARBOR/1/66 [WILD-TYPE) PRRP2_INBS1 RNA-DIRECTED RNA INFLUENZA B VIRUS157-194 POL SUB P2 (STRAIN B/SINGAPORE/222/79) PRRP3_IABUD RNA-DIRECTEDRNA INFLUENZA A VIRUS 537-567 POL SUB P3 (STRAINA/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IACH1 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN A/CHILE/1/83 331-358 POL SUB P3 PRRP3_IAHPR RNA-DIRECTEDRNA INFLUENZA A VIRUS 331-361 480-507 POL SUB P3 (STRAINA/EQUINE/PRAGUE/1/56) PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS487-514 POL SUB P3 (STRAIN A/SWINE/TENNESSEE/24/77) PRRP3_INBACRNA-DIRECTED RNA INFLUENZA B VIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANNARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA INFLUENZA BVIRUS 2-33 472-509 POL SUB P3 (STRAIN B/ANN ARBOR/1/66 [WILD-TYPE)PRRP3_INCBE RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN C/BERLIN/1/85)509-536 POL SUB P3 PRRP3_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS(STRAIN C/JJ/50) 509-536 POL SUB P3 PRRP3_THOGV RNA-DIRECTED RNA THOGOTOVIRUS 149-176 358-385 POL SUB P3 PRRPA_CVH22 RNA-DIRECTED RNA HUMANCORONA VIRUS (STRAIN 229E) 516-543 724-751 1971- 3781- POLYMERASE 20083811 PRRPA_CVMJH RNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM)624-651 4326- POLYMERASE 4353 PRRPB_BEV RNA-DIRECTED RNA BERNE VIRUS27-54 557-584 943-984 POLYMERASE PRRPB_CVMA5 RNA-DIRECTED RNA MURINECORONAVIRUS MHV (STRAIN A59) 885-915 1129- POLYMERASE 1170 PRRPB_CVMJHRNA-DIRECTED RNA MURINE CORONAVIRUS MHV (STRAIN JHM) 885-915 1129-POLYMERASE 1170 PRRPB_CVPFS RNA-DIRECTED RNA PORCINE TRANSMISSIBLEGASTROENTERITIS 20-47 353-380 385-412 POLYMERASE CORONAVIRUS (STRAINFS722 PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS1510- 2296- 2547- POLYMERASE (STRAIN BEAUDETTE) 1547 2331 2574PRRPB_IBVK RNA-DIRECTED RNA AVIAN INFECTIOUS BRONCHITIS VIRUS 165-200416-443 POLYMERASE (STRAIN KB8523) PRRPL_BTV10 RNA-DIRECTED RNABLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 1032- POLYMERASE 1059PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS 80-114 317-350 1802- 1892-1861 1919 PRRPL_CDVO RNA POLYMERASE BETA CANINE DISTEMPER VIRUS (STRAIN24-51 SUBUNIT ONDERSTEPOORT) PRRPL_HANTV RNA POLYMERASE HANTANN VIRUS(STRAIN 76-118) 404-433 461-510 564-591 738-765 905-946 1993- 2020PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRTAORY SYNCYTIAL VIRUS103-192 210-237 667-694 788-815 1007- 1138- 1453- 1775- 2062- SUBUNIT(STRAIN A2) 1034 1165 1480 1803 2089 PRRPL_MABVM RNA-DIRECTED RNAMARBURG VIRUS (STRAIN MUSOKE) 991-1018 1143- 1490- 1811- 2029- 2216-POLYMERASE 1170 1524 1838 2067 2266 PRRPL_MABVP RNA-DIRECTED RNA MARBURGVIRUS (STRAIN POPP) 991-1018 1490- 2239- POLYMERASE 1524 2267PRRPL_MEASE RNA POLYMERASE BETA MEASLES VIRUS (STRAIN EDMONSTON) 95-122196-223 2121- SUBUNIT 2148 PRRPL_MUMPM RNA POLYMERASE BETA MUMPS VIRUS(STRAIN MIYAHARA VACCINE) 111-142 780-807 1602- SUBUNIT 1632 PRRPL_NDVBRNA POLYMERASE BETA NEWCASTLE DISEASE VIRUS (STRAIN 250-284 477-5041979- SUBUNIT BEAUDETTE C/45) 2013 PRRPL_PI2HT RNA POLYMERASE BETA HUMANPARAINFLUENZA 2 VIRUS (STRAIN 322-349 1564- 1687- 1901- SUBUNIT TOSHIBA)1598 1721 1946 PRRPL_PI3H4 RNA POLYMERASE BETA HUMAN PARAINFLUENZA 3VIRUS (STRAIN 52-86 136-163 608-638 1081- 1994- 2115- SUBUNIT NIH 47885)1123 2036 2142 PRRPL_PUUMH RNA-DIRECTED RNA PUUMALA VIRUS (STRAINHALLNAS B1) 388-415 557-591 731-758 864-891 926-953 1940- 1998-POLYMERASE 1971 2025 PRRPL_RABVP RNA POLYMERASE BETA RABIES VIRUS(STRAIN PV) 204-231 605-632 2068- SUBUNIT 2123 PRRPL_RABVS RNAPOLYMERASE BETA RABIES VIRUS (STRAIN SAD B19) 204-231 605-632 2068-SUBUNIT 2123 PRRPL_RDV RNA-DIRECTED RNA RICE DWARF VIRUS 855-882POLYMERASE PRRPL_RVFVZ RNA-DIRECTED RNA RIFT VALLEY FEVER VIRUS (STRAINZH-548 M12) 1536- 1653- POLYMERASE 1563 1687 PRRPL_SEND5 RNA POLYMERASEBETA SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 629-656 1082- 1729- 2145-SUBUNIT 1116 1756 2180 PRRPL_SENDE RNA POLYMERASE BETA SENDAI VIRUS(STRAIN ENDERS) 449-476 902-936 1549- 1965- SUBUNIT 1576 2000PRRPL_SENDZ RNA POLYMERASE BETA SENDAI VIRUS (STRAIN 2) 629-656 1082-1729- 2145- SUBUNIT 1116 1756 2180 PRRPL_SEOU8 RNA-DIRECTED RNA SEOULVIRUS (STRAIN 80-39) 461-488 564-591 731-758 905-932 POLYMERASEPRRPL_SV5WR RNA POLYMERASE BETA SIMIAN VIRUS 5 (STRAIN 21004-WR) 1096-1250- 1680- 2120- SUBUNIT 1123 1277 1710 2147 PRRPL_SYNV RNA POLYMERASEBETA SONCHUS YELLOW NET VIRUS 825-859 1092- 1490- 1973- 2080- SUBUNIT1119 1520 2000 2107 PRRPL_TSWVB RNA-DIRECTEED RNA TOMATO SPOTTED WILTVIRUS (BRAZILIAN 477-504 542-573 1119- 1195- 1330- 1415- 1671- 1857-2083- POLYMERASE ISOLATE CPNH1/BR-01) 1150 1229 1357 1442 1698 1884 21102166-2193 2324-2368 2771-2798 PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS142-187 1037- 1304- 1071 1331 PRRPL_VSVJH RNA POLYMERASE BETA VESICULARSTOMATITIS VIRUS (SEROTYPE 1530- 1809- SUBUNIT NEW JERSEY/STRAIN HAZELHU1557 1836 PRRPL_VSVJO RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS(SEROTYPE 1205- 1809- SUBUNIT NEWE JERSEY/STRAIN OGDEN) 1232 1836PRRPL_VSVSJ RNA POLYMERASE BETA VESICULAR STOMATITIS VIRUS 1540- 1768-SUBUNIT (STRAIN SAN JUAN) 1567 1798 PRRPO_ACLSV RNA-DIRECTED RNA APPLEHLOROTIC LEAF SPOT VIRUS 228-264 564-591 POLYMERASE PRRPO_BWYVF PUTATIVERNA-DIR RNA POL BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 356-383PRRPO_BYDV1 PUTATIVE RNA-DIR RNA POL BARLEY YELLOW DWARF VIRUS 772-799(ISOLATE MAV-PS1) PRRPO_BYDVP PUTATIVE RNA-DIR RNA POL BARLEY YELLOWDWARF VIRUS (ISOLATE PAV) 772-799 PRRPO_BYDVR PUTATIVE RNA-DIR RNA POLBARLEY YELLOW DWARF VIRUS (ISOLATE P-PAV) 772-799 PRRPO_CARMV PUTATIVERNA-DIR RNA POL CARNATION MOTTLE VIRUS 93-127 277-304 667-694PRRPO_CGMVS PUTATIVE RNA-DIR RNA POL CUCUMBER GREEN MOTTLE MOSAIC VIRUS387-414 1040- (WATERMELON STRAIN SH) 1067 PRRPO_IBDV5 PUTATIVE RNA-DIRRNA POL AVIAN INFECTIOUS BURSAL DISEASE VIRUS 336-363 392-419 (STRAIN52/70) PRRPO_IBDVA PUTATIVE RNA-DIR RNA POL AVIAN INFECTIOUS BURSALDISEASE VIRUS 661-688 717-744 (STRAIN AUSTRALIAN 002-73) PRRPO_IPNVJPUTATIVE RNA-DIR RNA POL INFECTIOUS PANCREATIC NECROSIS VIRUS 773-800(SEROTYPE JASPER) PRRPO_IPNVS PUTATIVE RNA-DIR RNA POL INFECTIOUSPANCREATIC NECROSIS VIRUS 773-800 (SEROTYPE SP) PRRPO_LYCVA RNAPOLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 834-886 1052- (STRAINARMSTRONG) 1079 PRRPO_PPMVS PUTATIVE RNA-DIR RNA POL PEPPER MILD MOTTLEVIRUS (STRAIN SPAIN) 402-429 709-736 1072- 1099 PRRPO_REOVD RNA-DIRECTEDRNA REOVIRUS (TYPE 3/STRAIN DEARING) 61-88 POLYMERASE PRRPO_REOVLRNA-DIRECTED RNA REOVIRUS (TYPE 1/STRAIN LANG) 61-88 POLYMERASEPRRPO_ROTBR RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAIN RF) 68-95 218-245791-818 SUBUNIT VP1 PRRPO_ROTBU RNA-DIR RNA POL BOVINE ROTAVIRUS (STRAINUK) 65-95 218-245 791-841 975-1002 SUBUNIT VP1 PRRPO_ROTPC RNA-DIR RNAPOL PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 3-44 75-102 363-390543-585 SUBUNIT VP1 PRRPO_ROTPG RNA-DIR RNA POL PORCINE ROTAVIRUS(STRAIN GOTTFRIED 65-95 102-129 791-839 973-1002 SUBUNIT VP1 PRRPO_ROTS1RNA-DIR RNA POL SIMIAN 11 ROTAVIRUS (STRAIN SA11) 65-95 791-839 975-1002SUBUNIT VP1 PRRPO_SCVLA RNA-DIRECTED RNA SACCHAROMYCES CEREVISIAE VIRUSL-A 147-188 POLYMERASE PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 163-204241-271 1107- 1978- 1134 2008 PRRPO_TMGMV PUTATAIVE RNA-DIR RNA POLTOBACCO MILD GREEN MOSAIC VIRUS 230-257 1316- 1397- (TMV STRAIN U2) 13431424 PRRPP_BRSVA RNA POLYMERASE ALPHA BOVINE RESPIRATORY SYNCYTIAL VIRUS99-133 SUBUNIT (STRAIN A51908) PRRPP_CDVO RNA POLYMERASE ALPHA CANINEDISTEMPER VIRUS (STRAIN 315-370 SUBUNIT ONDERSTEPOORT) PRRPP_HRSV RNAPOLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNITPRRPP_HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS99-141 SUBUNIT (SUBGROUP B/STRAIN 18537) PRRPP_HRSVA RNA POLYMERASEALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS 99-141 SUBUNIT (STRAIN A2)PRRPP_HRSVL RNA POLYMERASE ALPHA HUMAN RESPIRATORY SYNCYTIAL VIRUS99-141 SUBUNIT (SUBGROUP A/STRAIN LONG) PRRPP_MEASE RNA POLYMERASE ALPHAMEASLES VIRUS (STRAIN EDMONSTON) 315-370 SUBUNIT PRRPP_MEASI RNAPOLYMERASE ALPHA MEASLES VIRUS (STRAIN IP-3-CA) 315-370 SUBUNITPRRPP_MEASY RNA POLYMERASE ALPHA MEASELS VIRUS (STRAIN YAMAGATA-1)315-370 SUBUNIT PRRPP_PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1VIRUS (STRAIN C35) 84-111 234-261 375-416 SUBUNIT PRRPP_PI1HC RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 84-111 234-261375-416 SUBUNIT PRRPP_PI1HD RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1VIRUS (STRAIN 84-111 232-262 375-416 SUBUNIT CI-5/73) PRRPP_PI1HE RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 1 VIRUS (STRAIN 84-111 244-271375-416 SUBUNIT CI-14/83) PRRPP_PI2H RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT PRRPP_PI2HT RNA POLYMERASEALPHA HUMAN PARAINFLUENZA 2 VIRUS 167-194 222-256 SUBUNIT (STRAINTOSHIBA) PRRPP_PI3B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 VIRUS34-91 255-282 285-314 SUBUNIT PRRPP_PI3H4 RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 3 VIRUS 114-144 269-299 SUBUNIT (STRAIN NIH 47885)PRRPP_PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A VIRUS 4-38SUBUNIT (STRAIN TOSHIBA) PRRPP_RABVP RNA POLYMERASE ALPHA RABIES VIRUS(STRAIN PV) 93-127 SUBUNIT PRRPP_SEND5 RNA POLYMERASE ALPHA SENDAI VIRUS(STRAIN Z/HOST MUTANTS) 330-357 379-420 SUBUNIT PRRPP_SEND6 RNAPOLYMERASE ALPHA SENDAI VIRUS (STRAIN 6/94) 330-357 379-420 SUBUNITPRRPP_SENDF RNA POLYMERASE ALPHA SENDAI VIRUS (STRAIN FUSHIMI) 330-357379-420 SUBUNIT PRRPP_SENDH RNA POLYMERASE ALPHA SENDAI VIRUS (STRAINHARIS) 330-357 379-420 SUBUNIT PRRPP_SENDZ RNA POLYMERASE ALPHA SENDAIVIRUS (STRAIN 2) 330-357 379-420 SUBUNIT PRRP_SV5 RNA POLYMERASE ALPHASIMIAN VIRUS 5 (STRAIN W3) 205-232 236-263 SUBUNIT PSODC_VACCVSUPEROXIDE DISMUTASE VACCINIA VIRUS (STRAIN WR) 72-99 LIKE PROTEINPSODC_VARV SUPEROXIDE DISMUTASE VARIOLA VIRUS 72-99 LIKE PROTEINPSPHR_AMEPV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS 91-118 140-167227-261 361-390 PSPI1_MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN LAUSANNE)286-313 PSPI2_VACCV SERINE PROTEINASE VACCINIA VIRUS (STRAIN WR) 59-86INHIBITOR 2 PSPIA_VACCC SERINE PROTEASE INH 2 VACCINIA VIRUS (STRAINCOPENHAGEN) 18-65 HOMOLOG PT2C2_CHVP1 TYPE II RESTRICTION ENZYMEPARAMECIUM BURSARIA CHLORELLA VIRUS 1 16-43 CVIAII PTAA2_VACCVTRANS-ACTIVATOR VACCINIA VIRUS 95-133 PROTEIN A2 PTAG8_FOWPVTRAN-ACTIVATOR FOWLPOX VIRUS 3-51 PROTEIN FP0 PTAG8_VACCVTRANS-ACTIVATOR VACCINIA VIRUS 3-30 PROTEIN GK1 PTAG8_VARVTRANS-ACTIVATOR VARIOLA VIRUS 3-30 PROTEIN GK-1 PTALA_BFDV LARGE TANTIGEN BUDGERIGAR FLEDGLING DISEASE VIRUS 291-318 PTALA_POVBO LARGE TANTIGEN BOVINE POLYOMAVIRUS 502-537 PTALA_POVHA LARGE T ANTIGEN HAMSTERPOLYOMAVIRUS 587-621 PTALA_POVLY LARGE T ANTIGEN LYMPHOTROPICPOLYOMAVIRUS 224-258 616-684 PTALA_POVM3 LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 3) 513-540 PTALA_POVMA LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN A2) 511-538 PTALA_POVMC LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN CRAWFORD 508-535 SMALL-PLAQUE) PTATR_NPVACTRANS-ACT TRANS REG AUTOGRAPHA CALIFORNICA NUCLEAR 407-434 489-523532-559 PROTEIN POLYHEDROSIS VIRUS PTATR_NPVBM TRANS-ACT TRANS REGBOMBYX MORI NUCLEAR POLYHEDROSIS VIRUS 412-439 494-528 537-564 PROTEINPTATR_NPVOP TRANS-ACT TRANS REG ORGYIA PSEUDOTSUGATA MULTICAPSID 512-554PROTEIN POLYHEDROSIS VIRUS PTEGU_EBV LARGE TEGUMENT PROTEIN EPSTEIN-BARRVIRUS (STRAIN B95-8) 145-172 1215- 1344- 1876- 1242 1371 1903PTEGU_HCMVA PROBABLE LARGE TEGUMENT HUMAN CYTOMEGALOVIRUS (STRAIN AD169)1251- 2202- PROTEIN 1281 2229 PTEGU_HSV11 LARGE TEGUMENT PROTEIN HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 667-694 1673- 1710 PTEGU_HSV6G LARGETEGUMENT PROTEIN HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 102-129 228-262567-611 962-993 1098- 1661- 1884- 1181 1688 1911 PTEGU_HSVEB LARGETEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 229-256 566-5931205- 1232 PTEGU_HSVSA PROBABLE LARGE TEGUMENT HERPESVIRUS SAIMIRI(STRAIN 11) 524-607 672-700 777-814 846-898 949-986 990-1017 1467- 2102-PROTEIN 1497 2135 PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTERVIRUS (STRAIN DUMAS) 1121- 1579- 1158 1609 PTERM_ADE07 DNA TERMINALPROTEIN HUMAN ADENOVIRUS TYPE 7 375-413 PTMAF_AVIS4 TRANSFORMING PROTEINMAF AVIAN MUSCULOAPONEUROTIC FIBROSARCOMA 302-336 VIRUS AS42 PTOP1_SFVKADNA TOPOISOMERASE I SHOPE FIBROMA VIRUS (STRAIN KASZA) 38-65 132-176PTOP1_VACCV DNA TOPOISOMERASE I VACCINIA VIRUS 38-65 PTOP1_VARV DNATOPOISOMERASE I VARIOLA VIRUS 38-65 PTOP2_ASFM2 DNA TOPOISOMERASE IIAFRICAN SWINE FEVER VIRUS (ISOLATE MALAWI 902-936 LIL 20/1) PTYSY_HSVATTHYMIDYLATE SYNTHASE HERPESVIRUS ATELES 116-143 PTYSY_HSVSA THYMIDYLATESYNTHASE HERPESVIRUS SAIMIRI (STRAIN 11) 120-147 PUL06_EBV VIRIONPROTEIN BBRF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 115-142 313-340 542-569PUL06_HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)586-613 PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 640-667 PUL06_HSVSA VIRION GENE 43 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11) 15-42 302-358 368-402 PUL08_HCMVA HYPOTHETICALPROTEIN UL8 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 6-47 PUL11_EBVHYPOTHETICAL PROTEIN BBLF1 EPSTEIN-BARR VIRUS (STRAIN B95-8) 15-42PUL13_HCMVA HYPOTHETICAL PROTEIN UL13 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 347-374 PUL14_HSVEB HYPOTHETICAL GENE 48 EQUINE HERPESVIRUS TYPE1 (STRAIN AB4P) 247-286 PROTEIN PUL14_VZVD HYPOTHETICAL GENE 46VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 64-101 PROTEIN PUL16_HCMVAHYPOTHETICAL PROTEIN UL16 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 81-112PUL20_HCMVA HYPOTH PRO UL20 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAINAD169) 34-61 PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 44-71 PUL21_VZVD GENE 38 PROTEIN VARICELLA-ZOSTER VIRUS(STRAIN DUMAS) 380-407 PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUSSAIMIRI (STAIN 11) 34-61 204-231 362-389 PUL31_HCMVA HYPOTHETICALPROTEIN UL31 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 167-194 254-284PUL32_HSVEB MAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE 1345-375 PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS (TYPE1/STRAIN 17) 116-143 PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 208-235 PUL34_VZVD VIRION GENE 24 PROTEIN VARICELLA-ZOSTERVIRUS (STRAIN DUMAS) 112-139 PUL35_HCMVA HYPOTHETICAL PROTEIN UL35 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 535-562 PUL37_HSV11 PROTEIN UL37 HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 470-497 853-884 PUL37_HSVEB GENE 23PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 715-749 987-1014PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 31-65685-737 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN DUMAS)107-134 485-512 719-746 976-1003 PUL41_VZVD HOST SHUTOFF VIRIONVARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 330-364 PROTEIN PUL42_HSV11DNA-BINDING PROTEIN UL42 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 231-258PUL43_VZVD GENE 15 MEMBRANE PROTEIN VARICELLA-ZOSTER VIRUS (STRAINDUMAS) 129-156 312-349 PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 114-148 448-485 763-790 802-853 PUL47_HSV11 VIRIONPROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 448-515 PUL47_HSV1FVIRION PROTEIN UL47 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN F) 488-515PUL47_HSVE4 97 KD ALPHA TRANS- EQUINE HERPESVIRUS TYPE 4 190-217INDUCING PROTEIN PUL50_HCMVA PROTEIN UL50 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 159-186 PUL52_EBV PROB DNA REPLICATION EPSTEIN-BARR VIRUS (STRAINB95-8) 185-212 787-814 PROTEIN BSLF1 PUL52_HSVEB DNA REPLICATION EQUINEHERPESVIRUS TYPE 1 (STRAIN AB41′) 193-220 943-970 PROTEIN UL52PUL52_HSVSA PROB DNA REP GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 130-157PROTEIN PUL52_VZVD PROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337PROTEIN (STRAIN DUMAS) PUL59_HCMVA HYPOTHETICAL PROTEIN UL59 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 74-101 PUL70_HCMVA PROB DNA REP PROTEINHUMAN CYTOMEGALOVIRUS (STRAIN AD169) 65-92 UL70 PUL73_HCMVA UL73GLYCOPROTEIN PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 5-73PUL73_HSVSA HYPOTHETICAL GENE 53 HERPESVIRUS SAIMIRI (STRAIN 11) 9-36PROTEIN PUL74_HCMVA HYPOTHETICAL PROTEIN UL74 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 45-79 PROTEIN BSLF1 PUL87_EBV HYPOTHETICAL PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 409-436 B(C)RF1 PUL87_HSV6UHYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 536-563729-768 UGANDA-1102) PUL87_HSVSA HYPOTHETICAL GENE 24 HERPRESVIRUSSAIMIRI (STRAIN 11) 582-609 PROTEIN PUL92_EBV HYPOTHETICAL PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 107-144 168-196 BDLF4 PUL92_HSVSAHYPOTHETICAL GENE 31 HERPESVIRUS SAIMIRI (STRAIN 11) 92-122 PROTEINPUL93_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 26-53314-381 PUL95_HCMVA HYPOTHETICAL PROTEIN UL95 HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 37-71 PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPES SIMPLEXVIRUS (TYPE 6/STRAIN 73-100 105-134 UGANDA-1102) PULA4_HCMVA VIRIONPROTEIN UL104 HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 4-31 443-477PULB9_HCMVA HYPOTHETICAL PROTEIN UL119 HUMAN CYTOMEGALOVIRUS (STRAINAD169) 33-78 PULD0_HCMVA HYPOTHETICAL PROTEIN UL130 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 90-124 PUNG_HSVSA URACIL-DNA GLYCOSYLASEHERPESVIRUS SAIMIRI (STRAIN 11) 135-176 PUNG_SFVKA URACIL-DNAGLYCOSYLASE SHOPE FIBROMA VIRUS (STRAIN KASZA) 81-115 PUNG_VACCCURACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN COPENHAGEN) 85-116 129-156PUNG_VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN WR) 85-116129-156 PUNG_VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS 85-116PUS09_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN AD169)20-47 HXLF3 PUS14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS(STRAIN AD169) 277-308 HVLF4 PUS18_HCMVA MEMBRANE PROTEIN HWLF5 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 191-218 PV121_ASFL5 LIS 121-1 PROTEINAFRICAN SWINE FEVER VIRUS (STRAIN LIS57) 2-29 PV125_AMVLE 125 KD PROTEINALFALFA MOSAIC VIRUS (STRAIN 425/ISOLATE 702-729 LEIDEN) PV137_ASFL5 LIS137 PROTEIN AFRICAN SWINEN FEVER VIRUS (STRAIN LIS57) 2-29 PV13K_TRVPL16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 59-86 PV143_NPVACHELICASE AUTOGRAPHA CALIFORNICA NUCLEAR 496-560 945-972 POLYHEDROSISVIRUS PV16K_TRVPS 16 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PSG) 79-113PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS 23-54 710-737 840-868PV1A_BMV 1A PROTEIN BROME MOSAIC VIRUS 22-58 384-411 836-863 982-919PV1A_CCMV 1A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 249-276 PV1A_CMVFN 1APROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 11-38 PV1A_CMVO 1A PROTEINCUCUMBER MOSAIC VIRUS (STRAIN O) 11-38 864-902 PV1A_CMVQ 1A PROTEINCUCUMBER MOSAIC VIRUS (STRAIN Q) 11-38 PV1A_PSVJ 1A PROTEIN PEANUT STUNTVIRUS (STRAIN J) 4-38 372-399 PV1A_TAV 1A PROTEIN TOMATO ASPERMY VIRUS11-38 271-298 376-403 857-884 PV25K_NPVAC 25 KD PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR POLYHEDROSIS VIRUS 4-31 PV29K_PEBV 29.6 KD PROTEINPEA EARLY BROWNING VIRUS 140-170 PV29K_TRVSY 29 KD PROTEIN TOBACCORATTLE VIRUS 170-197 PV29K_TRVTC 29 KD PROTEIN TOBACCO RATTLE VIRUS(STRAIN TCM) 48-75 PV2A_BBMV 2A PROTEIN BROAD BEAN MOTTLE VIRUS 301-328PV2A_CCMV 2A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 178-205 PV2A_CMVFN 2APROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 792-819 PV2A_PSVJ 2A PROTEINPEANUT STUNT VIRUS (STRAIN J) 325-352 717-751 PV2A_TAV 2A PROTEIN TOMATOASPERMY VIRUS 313-340 722-756 PV30K_HCMVE 30 KD MAJOR EARLY PROTEINHUMAN CYTOMEGALOVIRUS (STRAIN 194-221 EISENHARDT) PV30K_TRVTC 29.1 KDPROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 130-160 PV33P_ADE41 33 KDPHOSPHOPROTEIN HUMAN ADENOVIRUS TYPE 41 15-42 PV362_ASFB7 K′362 PROTEINAFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 75-102 PV363_ASFB7 D′363PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 3-30 172-199 PV3A_BMV3A PROTEIN BROME MOSAIC VIRUS 11-38 PV3A_CMVFN 3A PROTEIN CUCUMBERMOSAIC VIRUS (STRAIN FNY) 222-252 PV3A_CMVM 3A PROTEIN CUCUMBER MOSAICVIRUS (STRAIN M) 2171-252 PV3A_CMVO 3A PROTEIN CUCUMBER MOSAIC VIRUS(STRAIN O) 222-253 PV3A_CMVY 3A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Y)222-253 PV3B_IBVB 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 25-57(STRAIN BEAUDETTE) PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUS BRONCHITISVIRUS 29-56 (STRAIN UK/183/66) PV3A_IBVB 3B PROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS 6-33 (STRAIN BEAUDETTE) PV50K_BYDVP 50 KD PROTEINBARLEY YELLOW DWARF VIRUS (ISOLATE PAV) 119-146 PV51K_BWYVF 51 KDPROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE FL-1) 113-147 424-451PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE GB1)113-147 424-451 PV56K_PLRV1 56 KD PROTEIN POTATO LEAFROLL VIRUS(STRAIN 1) 124-151 438-472 PV56K_PLRVW 56 KD PROTEIN POTATO LEAFROLLVIRUS (STRAIN WAGENINGEN) 124-151 438-477 PV58K_BSMV 58 KD PROTEINBARLEY STRIPE MOSAIC VIRUS 128-155 PV70K_PLRV1 69.7 KD PROTEIN POTATOLEAFROLL VIRUS (STRAIN 1) 110-140 PV70K_PLRVW 69.7 KD PROTEIN POTATOLEAFROLL VIRUS (STRAIN WAGENINGEN) 110-140 PV90K_AMVLE 90 KD PROTEINALFALFA MOSAIC VIRUS (STRAIN 425/ISOLATE LEIDEN) 107-134 PVA06_VACCCPROTEIN A6 VACCINIA VIRUS (STRAIN COPENHAGEN) 157-216 250-277 283-310314-355 PVA06_VACCV PROTEIN A6 VACCINIA VIRUS (STRAIN WR) 156-215249-276 282-309 313-354 PVA06_VARV PROTEIN A6 VARIOLA VIRUS 157-216250-277 283-310 314-355 PVA08_VACCC PROTEIN A8 VACCINIA VIRUS (STRAINCOPENHAGEN) 176-206 PVA08_VARV PROTEIN A8 VARIOLA VIRUS 176-206PVA09_VARV PROTEIN A9 VARIOLA VIRUS 60-95 PVA11_VACCC PROTEIN A11VACCINIA VIRUS (STRAIN COPENHAGEN) 219-283 PVA11_VARV PROTEIN A11VARIOLA VIRUS 220-284 PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VARIOLAVIRUS 440-467 PVA20_VACCC PROTEIN A20 VACCINIA VIRUS (STRAIN COPENHAGEN)8-67 330-357 PVA20_VARV PROTEIN A20 VARIOLA VIRUS 8-67 330-357PVA22_VACCC PROTEIN A22 VACCINIA VIRUS (STRAIN COPENHAGEN) 45-72PVA22_VARV PROTEIN A22 VARIOLA VIRUS 56-83 PVA23_VACCC PROTEIN A23VACCINIA VIRUS (STRAIN COPENHAGEN) 95-144 PVA23_VARV PROTEIN A23 VARIOLAVIRUS 95-144 PVA28_VACCV PROTEIN A28 VACCINIA VIRUS (STRAIN WR) 22-49PVA28_VARV PROTEIN A28 VARIOLA VIRUS 22-49 PVA30_VACCV PROTEIN A30VACCINIA VIRUS (STRAIN WR) 12-55 PVA31_VACCC PROTEIN A31 VACCINIA VIRUS(STRAIN COPENHAGEN) 88-115 PVA31_VARV PROTEIN A31 VARIOLA VIRUS 88-122PVA34_VACCC PROTEIN A34 VACCINIA VIRUS (STRAIN COPENHAGEN) 87-114PVA34_VACCV PROTEIN A34 VACCINIA VIRUS (STRAIN WR) 87-114 PVA34_VARVPROTEIN A34 VARIOLA VIRUS 87-114 PVA36_VACCV PROTEIN A36 PRECURSORVACCINIA VIRUS (STRAIN WR) 120-155 PVA36_VARV PROTEIN A36 PRECURSORVARIOLA VIRUS 127-154 PVA38_VACCC PROTEIN A38 VACCINIA VIRUS (STRAINCOPENHAGEN) 44-81 PVA38_VACCV PROTEIN A38 VACCINIA VIRUS (STRAIN WR)44-81 PVA38_VARV PROTEIN A38 VARIOLA VIRUS 44-91 PVA39_VACCC PROTEIN A39VACCINIA VIRUS (STRAIN COPENHAGEN) 37-71 155-182 PVA39_VACCV PROTEIN A39VACCINIA VIRUS (STRAIN WR) 75-109 193-220 PVA43_VACCC PROTEIN A43VACCINIA VIRUS (STRAIN COPENHAGEN) 145-172 PVA43_VACCV PROTEIN A43VACCINIA VIRUS (STRAIN WR) 145-172 PVA43_VARV PROTEIN A43 VARIOLA VIRUS146-173 PVA47_VACCC PROTEIN A47 VACCINIA VIRUS (STRAIN COPENHAGEN)143-184 PVA47_VACCV PROTEIN A47 VACCINIA VIRUS (STRAIN WR) 143-184PVA47_VARV PROTEIN A47 VARIOLA VIRUS 142-184 PVA49_VACCC PROTEIN A49VACCINIA VIRUS (STRAIN COPENHAGEN) 61-91 PVA49_VACCV PROTEIN A49VACCINIA VIRUS (STRAIN WR) 61-91 PVA49_VARV PROTEIN A49 VARIOLA VIRUS61-91 PVA55_VACCC PROTEIN A55 VACCINIA VIRUS (STRAIN COPENHAGEN) 55-82126-156 435-462 PVA55_VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 55-82126-156 435-462 PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP VIRUS 22-49PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST 79-106 KENYAN844) PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS (STRAIN NIGERIAN)79-106 PVAL3_SLCV AL3 PROTEIN SQUASH LEAF CURL VIRUS 101-128 PVAL3_TYLCVAL3 PROTEIN TOMATO YELLOW LEAF CURL VIRUS 79-129 PVAT_CAMVC APHIDTRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 22-7093-129 PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS(STRAIN D/H) 22-70 PVAT_CAMVE APHID TRANSMISSION PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN BBC) 22-70 93-129 PVAT_CAMVN APHID TRANSMISSIONPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN NY8153) 22-70 93-129 PVAT_CAMVPAPHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN PV147) 22-7093-129 PVAT_CAMVS APHID TRANSMISSION PROTEIN 22-70 93-130 PVAT_CAMVWAPHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 36-70PVAT_CERV APHID TRANSMISSION PROTEIN CARNATION ETCHED RING VIRUS 102-138PVAT_FMVD APHID TRANSMISSION PROTEIN FIGWORT MOSAIC VIRUS (STRAIN DXS)52-82 103-130 PVB03_VACCV PROTEIN B3 VACCINIA VIRUS (STRAIN WR) 108-135PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAIN COPENHAGEN) 92-123 182-211286-313 324-361 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS (STRAIN WR) 92-123182-211 286-313 324-361 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 89-127182-211 286-313 324-361 PVB05_VACC0 PLAQUE-SIZE/HOST RANGE VACCINIAVIRUS (STRAIN LC16MO) 254-284 PRO PREC PVB05_VACCC PLAQUE-SIZE/HOSTRANGE VACCINIA VIRUS (STRAIN COPENHAGEN) 254-284 PRO PREC PVB05_VACCLPLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 254-284 PRO PRECPVB05_VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN WR) 254-284PRO PREC PVB07_VACCV PROTEIN B7 PRECURSOR VACCINIA VIRUS (STRAIN WR)28-62 PVB08_VACCC PROTEIN B8 PRECURSOR VACCINIA VIRUS (STRAINCOPENHAGEN) 26-53 PVB08_VACCV PROTEIN B8 PRECURSOR VACCINIA VIRUS(STRAIN WR) 26-53 PVB11_VACCC PROTEIN B11 VACCINIA VIRUS (STRAINCOPENHAGEN) 21-54 PVB11_VACCV PROTEIN B11 VACCINIA VIRUS (STRAIN WR)5-38 PVB16_COWPX IL-1 BIND PRO PRECURSOR COWPOX VIRUS 113-140PVB17_VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN COPENHAGEN) 258-285PVB17_VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) 258-285 PVB18_VACCCPROTEIN B18 VACCINIA VIRUS (STRAIN COPENHAGEN) 337-375 PVB18_VACCVPROTEIN B18 VACCINIA VIRUS (STRAIN WR) 337-375 PVB18_VARV PROTEIN B18VARIOLA VIRUS 337-378 PVB19_VACCC SURFACE ANTIGEN S VACCINIA VIRUS(STRAIN COPENHAGEN) 182-212 PRECURSOR PVB19_VACCD SURFACE ANTIGEN SVACCINIA VIRUS (STRAIN DAIREN I) 180-210 PRECURSOR PVB19_VACCV SURFACEANTIGEN S VACCINIA VIRUS (STRAIN WR) 180-210 PRECURSOR PVB19_VARVSURFACE ANTIGEN S VARIOLA VIRUS 180-210 PRECURSOR PVB20_VACCC PROTEINB20 VACCINIA VIRUS (STRAIN COPENHAGEN) 48-82 PVB21_VACCV PROTEIN B21VACCINIA VIRUS (STRAIN WR) 64-91 PVBL1_BGMV BL1 PROTEIN BEAN GOLDENMOSAIC VIRUS 120-147 248-275 PVBL1_CLVK BL1 PROTEIN CASSAVA LATENT VIRUS(STRAIN WEST 118-145 KENYAN 844) PVBL1_CLVN BL1 PROTEIN CASSAVA LATENTVIRUS (STRAIN NIGERIAN) 118-145 PVBL1_PYMVV BL1 PROTEIN POTATO YELLOWMOSIAC VIRUS (ISOLATE 120-147 VENEZUELA) PVC02_VACCC PROTEIN C2 VACCINIAVIRUS (STRAIN COPENHAGEN) 405-432 PVC02_VACCV PROTEIN C2 VACCINIA VIRUS(STRAIN WR) 41-71 405-432 PVC04_SFVKA PROTEIN C4 SHOPE FIBROMA VIRUS(STRAIN KASZA) 209-236 484-515 PVC04_VACCC PROTEIN C4 VACCINIA VIRUS(STRAIN COPENHAGEN) 12-46 PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAINWR) 12-16 PVC04_VARV PROTEIN C4 VARIOLA VIRUS 12-46 PVC05_SFVKAHYPOTHETICAL PROTEIN C5 SHOPE FIBROMA VIRUS (STRAIN KASZA) 85-125152-179 PVC05_VACCC PROTEIN C5 VACCINIA VIRUS (STRAIN COPENHAGEN) 38-65PVC05_VACCV PROTEIN C5 VACCINIA VIRUS (STRAIN WR) 38-65 PVC05_VARVPROTEIN C5 VARIOLA VIRUS 36-66 PVC07_VACCV PROTEIN C7 VACCINIA VIRUS(STRAIN WR) 80-111 PVC07_VARV PROTEIN C7 VARIOLA VIRUS 80-111PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN) 42-69 82-116178-205 252-279 289-325 575-605 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS(STRAIN WR) 42-69 82-116 178-205 252-279 289-325 575-605 PVC10_VACCCPROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN) 136-180 PVC10_VACCVPROTEIN C10 VACCINIA VIRUS (STRAIN WR) 136-163 PVC10_VARV PROTEIN C10VARIOLA VIRUS 136-163 PVC13_SFVKA PROTEIN C13 SHOPE FIBROMA VIRUS(STRAIN KASZA) 3-30 39-66 137-182 206-240 PVC17_VACCC PROTEIN C17/B23VACCINIA VIRUS (STRAIN COPENHAGEN) 111-152 PVC18_VACCC PROTEIN C18/B24VACCINIA VIRUS (STRAIN COPENHAGEN) 40-74 PVC19_SFVKA PROTEIN C19 SHOPEFIBROMA VIRUS (STRAIN KASZA) 56-97 PVC20_VACCC PROTEIN C20/B26 VACCINIAVIRUS (STRAIN COPENHAGEN) 72-99 PVC22_VARV PROTEIN C22/B28 HOMOLOGVARIOLA VIRUS 299-326 PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARR VIRUS(STRAIN B95-8) 847-874 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPES SIMPLEXVIRUS (TYPE 6/STRAIN 136-170 355-382 UGANDA-1102) PVCAP_HSVSA MAJORCAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 769-799 PVCG3_NPVACDNA-BINDING PROTIEN AUTOGRAPHA CALIFORNICA NUCLEAR 133-165 199-248POLYHEDROSIS VIRUS PVCOM_ADE02 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE2 88-115 PVCOM_ADE05 MINOR CORE PROTEIN HUMAN ADENOVIRUS TYPE 5 87-114PVD05_FOWP1 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 6-33 184-211321-348 PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN)240-267 333-360 PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR)240-267 PVD05_VARV PROTEIN D5 VARIOLA VIRUS 240-267 PVD09_VACCC PROTEIND9 VACCINIA VIRUS (STRAIN COPENHAGEN) 123-150 PVD09_VACCV PROTEIN D9VACCINIA VIRUS (STRAIN WR) 123-150 PVD09_VARV PROTEIN D9 VARIOLA VIRUS123-160 PVD10_SFVKA PROTEIN D10 SHOPE FIBROMA VIRUS (STRAIN KASZA) 18-52PVDBP_CERV DNA-BINDING PROTEIN CARNATION ETCHED RING VIRUS 2-35PVE02_VARV PROTEIN E2 VARIOLA VIRUS 282-322 PVE06_VACCC PROTEIN E6VACCINIA VIRUS (STRAIN COPENHAGEN) 89-116 437-464 PVE06_VACCV PROTEIN E6VACCINIA VIRUS (STRAIN WR) 89-116 437-464 PVE06_VARV PROTEIN E6 VARIOLAVIRUS 89-116 367-394 437-464 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 18 60-87 PVE1_HPV2A E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 21-48PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 180-207 PVE1_HPV39 E1PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 103-130 PVE1_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 55-89 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 42 25-59 PVE1_HPV47 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 146-173PVE1_HPV57 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 57 21-48 PVE26_NPVACEARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 72-113 POLYHEDROSISVIRUS PVE2_CRPVK PROBABLE E2 PROTEIN COTTONTAIL RABBIT (SHOPE)PAPILLOMAVIRUS 5-34 (STRAIN KANSAS) PVE2_HPV05 PROBABLE E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5 17-51 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 13 157-184 334-361 PVE2_HPV16 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE16 61-105 312-342 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 18313-340 PVE2_HPV1A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 159-186PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 2A 159-193 PVE2_HPV33 E2PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 304-331 PVE2_HPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 158-192 327-354 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 7-34 323-357 PVE2_HPV47 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 47 17-51 148-175 276-303 PVE2_HPV51 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51 137-184 PVE2_HPV57 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 57 166-193 PVE2_HPV58 E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58 2-36 309-336 PVE2_HPV5B PROBABLE E2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 17-51 PVE2_PAPVE PROBABLE E2 PROTEIN EUROPEAN ELKPAPILLOMA VIRUS 120-150 PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS TYPE 1 267-294 327-361 PVE4_HPV05 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5 202-229 PVE4_HPV11 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 11 81-108 PVE4_HPV16 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 16 66-93 PVE4_HPV18 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 18 59-86 PVE4_HPV31 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 31 75-102 PVE4_HPV41 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 63-97 PVE4_HPV5B PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 202-229 PVE5A_HPV11 PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS TYPE 11 30-60 PVE5A_HPV6B PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS TYPE 6B 30-60 PVE5A_HPV6C PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS TYPE 6C 30-60 PVE5_HPV35 PROBABLE E5 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 27-54 PVE5_HPV5B PROBABLE E5 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 11-41 PVE5_PCPV1 PROBABLE E5 PROTEIN PYGMYCHIMPANZEE PAPILLOMAVIRUS TYPE 1 35-62 PVE6_HPV18 E6 PROTEIN HUMANPAPILLOMAVIRUS TYPE 18 75-102 PVE6_HPV31 E6 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 31 69-96 PVE6_HPV39 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 39 71-102PVE6_HPV41 E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 41 119-146 PVE6_HPV45 E6PROTEIN HUMAN PAPILLOMAVIRUS TYPE 45 75-102 PVE6_HPV51 E6 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51 72-99 PVE6_HPVME E6 PROTEIN HUMAN PAPILLOMAVIRUSTYPE ME180 71-102 PVE94_NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICANUCLEAR 620-647 POLYHEDROSIS VIRUS PVEF_GVTN VIRAL ENHANCING FACTORTRICHOPLUSIA N1 GRANULOSIS VIRUS 411-438 PVENV_DHV11 ENVELOPEGLYCOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) 318-366 PRECURSORPVENV_EAV PROBABLE ENVELOPE PROTEIN EQUINE ARTERITIS VIRUS 120-147PVENV_THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 313-347 PRECURSORPVF03_VACCC PROTEIN F3 VACCINIA VIRUS (STRAIN COPENHAGEN) 71-110 185-212PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAIN WR) 71-110 185-212PVF05_VACCP 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN L-IVP) 33-60 PROPRECURSO PVF05_VACCV 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN WR)33-60 PRO PRECURSO PVF06_VARV PROTEIN F6 VARIOLA VIRUS 10-44 PVF11_VACCCPROTEIN F11 VACCINIA VIRUS (STRAIN COPENHAGEN) 274-321 PVF11_VACCPPROTEIN F11 VACCINIA VIRUS (STRAIN L-IVP) 270-317 PVF11_VARV PROTEIN F11VARIOLA VIRUS 274-321 PVF12_VACCC PROTEIN F12 VACCINIA VIRUS (STRAINCOPENHAGEN) 10-37 113-140 554-581 PVF12_VACCP PROTEIN F12 VACCINIA VIRUS(STRAIN L-IVP) 10-37 113-140 554-581 PVF12_VARV PROTEIN F12 VARIOLAVIRUS 10-37 202-236 554-581 PVF16_VACCC PROTEIN F16 VACCINIA VIRUS(STRAIN COPENHAGEN) 35-62 152-179 PVF16_VACCP PROTEIN F16 VACCINIA VIRUS(STRAIN L-IVP) 35-62 152-179 PVF16_VARV PROTEIN F16 VARIOLA VIRUS 35-62149-179 PVFP4_FOWPV PROTEIN FP4 FOWLPOX VIRUS 146-173 PVFUS_ORNFNZ 10 KDFUSION PROTEIN ORF VIRUS (STRAIN NZ2) 59-86 PVFUS_VACCC 14 KD FUSIONPROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 37-64 PVFUS_VACCV KD FUSIONPROTEIN VACCINIA VIRUS (STRAIN WR) 37-64 PVG01_VACCC PROTEIN G1 VACCINIAVIRUS (STRAIN COPENHAGEN) 225-252 301-335 PVG01_VACCV PROTEIN G1VACCINIA VIRUS (STRAIN WR) 164-191 240-274 PVG01_VARV PROTEIN G1 VARIOLAVIRUS 225-252 301-335 PVG02_VACCV ISATIN-B-TSC DEP PROTEIN VACCINIAVIRUS (STRAIN WR) 96-123 PVG02_VARV ISATIN-B-TSC DEP PROTEIN VARIOLAVIRUS 96-123 PVG03_HSVEB GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 146-176 PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE1 (STRAIN 146-176 KENTUCKY A) PVG05_VACCC PROTEIN G5 VACCINIA VIRUS(STRAIN COPENHAGEN) 48-75 131-161 225-289 355-389 PVG05_VARV PROTEIN G5VARIOLA VIRUS 48-75 124-161 255-289 355-389 PVG07_HSV11 HYPOTH GENE 7MEMB PRO ICTALURID HERPES VIRUS 1 71-98 PVG09_VACCC PROTEIN F1 VACCINIAVIRUS (STRAIN COPENHAGEN) 308-338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS(STRAIN WR) 271-301 PVG09_VARV PROTEIN F1 VARIOLA VIRUS 308-338PVG12_SPVIR GENE 12 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 11-45PVG17_HSV11 HYPOTHETICAL GENE 17 ICTALURID HERPESVIRUS 1 177-204 PROTEINPVG18_HSV11 HYPOTHETICAL GENE 18 ICTALURID HERPESVIRUS 1 174-208 PROTEINPVG1_SPVIR CAPSID PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 260-287PVG1_SPV4 CAPSID PROTEIN SPIROPLASMA VIRUS 4 287-314 383-410 PVG22_HSV11HYPOTHETICAL GENE 22 ICTALURID HERPESVIRUS 1 373-400 581-622 668-705766-824 PROTEIN PVG24_HSV11 HYPOTHETICAL GENE 24 ICTALURID HERPESVIRUS 131-58 PROTEIN PVG28_HSV11 HYPOTHETICAL GENE 28 ICTALURID HERPESVIRUS 1253-290 497-528 PROTEIN PVG2R_AMEPV HYPOTHETICAL G2R PROTEIN AMSACTAMOOREI ENTOMOPOXVIRUS 33-64 91-118 PVG2_SPV1R GENE 2 PROTEIN SPIROPLASMAVIRUS SPV1-R8A2 B 285-326 PVG2_SPV4 GENE 2 PROTEIN SPIROPLASMA VIRUS 4146-173 175-205 262-310 PVG34_HSV11 HYPOTHETICAL GENE 34 ICTALURIDHERPESVIRUS 1 95-122 PROTEIN PVG37_HSV11 HYPOTHETICAL GENE 37 ICTALURIDHERPESVIRUS 1 442-469 PROTEIN PVG39_HSV11 HYPOTHETICAL GENE 39 ICTALURIDHERPESVIRUS 1 651-678 1088- PROTEIN 1115 PVG3L_AMEPV HYPOTHETICAL G3LPROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 2-29 PVG3_SPVIR GENE 3 PROTEINSPIROPLASMA VIRUS SPV1-R8A2 B 15-49 PVG3_SPV4 GENE 3 PROTEIN SPIROPLASMAVIRUS 4 18-52 87-148 PVG45_HSVSA HYPOTHETICAL GENE 45 HERPESVIRUSSAIMIRI (STRAIN 11) 138-165 PROTEIN PVG46_HSV11 PROBABLE MAJOR ICTALURIDHERPESVIRUS 1 142-169 346-373 897-924 973-1007 GLYCOPROTEIN PVG48_HSVSAHYPOTHETICAL GENE 48 HERPESVIRUS SAIMIRI (STRAIN 11) 360-394 PROTEINPVG4R_AMEPV G4R PROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 4-31 PVG4_SPV1RGENE 4 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 116-146 PVG51_HSV11 HYPOTHGENE 51 MEMBRANE ICTALURID HERPESVIRUS 1 34-61 87-114 PROTEINPVG52_HSVSA HYPOTHETICAL GENE 52 HERPESVIRUS SAIMIRI (STRAIN 11) 47-74PROTEIN PVG56_HSV11 HYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 1 582-609PROTEIN PVG5_SPV1R GENE 5 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 65-92PVG5_SPV4 GENE 5 PROTEIN SPIROPLASMA VIRUS 4 56-83 PVG63_HSV11HYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 550-584 PROTEIN PVG64_HSV11HYPOTHETICAL GENE 64 ICTALURID HERPESVIRUS 1 447-504 PROTEIN PVG65_HSV11HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 1213- PROTEIN 1254PVG66_HSV11 HYPOTHETICAL GENE 66 ICTALURID HERPESVIRUS 1 362-406 PROTEINPVG67_HSV11 HYPOTHETICAL GENE 67 ICTALURID HERPESVIRUS 1 1342- PROTEIN1369 PVG68_HSV11 HYPOTHETICAL GENE 68 ICTALURID HERPESVIRUS 1 261-288PROTEIN PVG72_HSV11 HYPOTHETICAL GENE 72 ICTALURID HERPESVIRUS 1 447-481PROTEIN PVG75_HSV11 HYPOTHETICAL GENE 75 ICTALURID HERPESVIRUS 1 388-422PROTEIN PVG76_HSV11 HYPOTHETICAL GENE 76 ICTALURID HERPESVIRUS 1 200-227PROTEIN PVG7_SPV4 GENE 7 PROTEIN SPIROPLASMA VIRUS 4 14-44 PVGF1_IBVB F1PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1230- 2408- 1260 2435PVGL2_CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN F15)399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBL9 E2 GLYCOPROTEINPRECURSOR BOVINE CORONAVIRUS (STRAIN L9) 399-426 1022- 1278- 1084 1305PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN LY-138)399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBM E2 GLYCOPROTEINPRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 399-426 642-676 1022- 1278-1084 1305 PVGL2_CVBQ E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN QUEBEC) 399-426 642-676 1022- 1278- 1084 1305 PVGL2_CVBV E2GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE) 399-426642-676 1022- 1278- 1084 1305 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSORHUMAN CORONAVIRUS (STRAIN 229E) 770-797 809-875 1056- 1112 PVGL2_CVM4 E2GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- WILDTYPE 4) 1092 PVGL2_CVMA5 E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUSMHV (STRAIN A59) 36-63 591-632 978-1040 PVGL2_CVMJC E2 GLYCOPROTEINPRECURSOR MURINE CORONAVIRUS MHV (STRAIN 643-684 1030- JHMV/VARIANTCL-2) 1092 PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV(STRAIN JHM) 502-543 889-951 PVGL2_CVPFS E2 GLYCOPROTEIN PRECURSORPORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1072- 1353-CORONAVIRUS (STRAIN FS722 1145 1389 PVGL2_CVPM1 E2 GLYCOPROTEINPRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-110 692-733 1069-1353- CORONAVIRUS (STRAIN MILLE 1145 1389 PVGL2_CVPPR E2 GLYCOPROTEINPRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 73-107 690-731 1067-1351- CORONAVIRUS (STRAIN PUR46 1143 1387 PVGL2_CVPPU E2 GLYCOPROTEINPRECURSOR PORCINE TRANSMISSIBLE GASTROENTERITIS 69-107 690-731 1067-11431351- CORONAVIRUS (STRAIN PURD 1387 PVGL2_CVPR8 E2 GLYCOPROTEINPRECURSOR PORCINE RESPIRATORY CORONAVIRUS (STRAIN 468-509 845-921 1129-86/137004/BRITISH ISOLAT 1165 PVGL2_CVPRM E2 GLYCOPROTEIN PRECURSORPORCINE RESPIRATORY CORONAVIRUS 468-509 845-921 1129- (STRAIN RM4) 1165PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLEGASTROENTERITIS 69-107 690-731 1067-1143 1351- CORONAVIRUS (STRAIN NEB721387 PVGL2_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8)68-102 GLYCOPROTEIN PVGL2_FIPV E2 GLYCOPROTEIN PRECURSOR FELINEINFECTIOUS PERITONITIS VIRUS 189-233 454-481 709-736 1072- 1356- (STRAIN79-1146) 1148 1392 PVGL2_1BV6 E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUSBRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN 6/82) 1091 PVGL2_1BVB E2GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-9021056- (STRAIN BEAUDETTE) 1090 PVGL2_IBVD2 E2 GLYCOPROTEIN PRECURSORAVIAN INFECTIOUS BRONCHITIS VIRUS 809-836 876-903 1057- (STRAIN D274)1091 PVGL2_IBVK E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITISVIRUS 808-835 875-902 1056- (STRAIN KB8523) 1090 PVGL2_IBVM E2GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITIS VIRUS 808-835 875-9021056- (STRAIN M41) 1090 PVGLB_EBV GLYCOPROTEIN GP110 EPSTEIN-BARR VIRUS(STRAIN B95-8) 95-122 631-658 PRECURSOR PVGLB_HCMVA GLYCOPROTEIN BPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN AD169) 25-88 397-424 440-467851-878 PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS(STRAIN TOWNE) 50-88 397-424 435-462 852-879 PVGLB_HSVB1 GLYCOPROTEIN 1PRECURSOR BOVINE HERPESVIRUS TYPE 1 427-454 PVGLB_HSVB2 GLYCOPROTEIN B-1BOVINE HERPESVIRUS TYPE 2 (STRAIN BMV) 447-474 PRECURSOR PVGLB_HSVE1GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (ISOLATE HVS25A)443-470 934-961 PVGLB_HSVE4 GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUSTYPE 4 486-513 616-643 PVGLB_HSVEA GLYCOPROTEIN B PRECURSOR EQUINEHERPESVIRUS TYPE 1 (STRAIN AB1) 443-470 934-961 PVGLB_HSVEB GLYCOPROTEINB PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P) 443-470 934-961PVGLB_HSVEL GLYCOPROTEIN B PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAINKENTUCKY D) 443-470 933-960 PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR MAREK'SDISEASE HERPESVIRUS (STRAIN RB-1B) 93-120 352-379 PVGLB_MCMVSGLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN SMITH) 381-408441-475 PVGLC_HSV11 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE1/STRAIN 17) 469-510 PVGLC_HSV1K GLYCOPROTEIN C PRECURSOR HERPES SIMPLEXVIRUS (TYPE 1/STRAIN KOS) 469-510 PVGLC_HSVEB GLYCOPROTEIN C PRECURSOREQUINE HERPESVIRUS TYPE 1 124-151 PVGLC_VZVD GLYCOPROTEIN GPVVARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 295-322 PVGLC_VZVS GLYCOPROTEINGPV VARICELLA-ZOSTER VIRUS (STRAIN SCOTT) 295-322 PVGLE_HSV2GLYCOPROTEIN E PRECURSOR HERPES SIMPLEX VIRUS (TYPE 2) 111-148PVGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65154-202 216-243 442-469 486-531 PRECURSOR (STRAIN A51908) PVGLF_BRSVCFUSION GLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202216-243 444-471 486-533 PRECURSOR (STRAIN COPENHAGEN) PVGLF_BRSVR FUSIONGLYCOPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243444-469 488-533 PRECURSOR (STRAIN RB94) PVGLF_CDVO FUSION GLYCOPROTEINCANINE DISTEMPER VIRUS (STRAIN 252-293 340-367 PRECURSOR ONDERSTEPOORT)PVGLF_HRSV1 FUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65154-203 442-471 488-515 PRECURSOR (SUBGROUP B/STRAIN 18537) PVGLF_HRSVAFUSION GLYCOPROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202213-243 488-518 PRECURSOR (STRAIN A2) PVGLF_HRSVL FUSION GLYCOPROTEINHUMAN RESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 216-243 444-471 488-515PRECURSOR (SUBGROUP A/STRAIN LONG) PVGLF_HRSVR FUSION GLYCOPROTEIN HUMANRESPIRATORY SYNCYTIAL VIRUS 38-65 154-202 213-243 442-471 488-518PRECURSOR (STRAIN RSS-2) PVGLF_MEASE FUSION GLYCOPROTEIN MEASLES VIRUS(STRAINS EDMONSTON 228-262 PRECURSOR AND HALLE) PVGLF_MEASI FUSIONGLYCOPROTEIN MEASLES VIRUS (STRAIN IP-3-CA) 231-265 PRECURSORPVGLF_MEASY FUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN YAMAGATA-1)228-262 PRECURSOR PVGLF_MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS (STRAINSBL-1) 20-54 447-486 PRECURSOR PVGLF_MUMPM FUSION GLYCOPROTEIN MUMPSVIRUS (STRAIN MIYAHARA VACCINE) 20-54 447-486 PRECURSOR PVGLF_MUMPRFUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 20-54 447-486 PRECURSORPVGLF_MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN SBL) 151-178 426-511PRECURSOR PVGLF_NDVL FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN151-178 426-512 PRECURSOR AUSTRALIA-VICTORIA/32) PVGLF_NDVB FUSIONGLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSORBEAUDETTE C/45) PVGLF_NDVH3 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS(STRAIN HER/33) 151-178 426-512 PRECURSOR PVGLF_NDVH4 FUSIONGLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSORB1-HITCHNER/47) PVGLF_NDVI FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS(STRAIN ITALIEN/45) 151-178 426-512 PRECURSOR PVGLF_NDVA FUSIONGLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN LAS/46) 151-178 192-219426-512 PRECURSOR PVGLF_NDVM FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS(STRAIN 151-178 437-512 PRECURSOR MIYADERA/51) PVGLF_NDVQ FUSIONGLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAIN 151-178 433-512 PRECURSORQUEENSLAND/66) PVGLF_NDVT FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS(STRAIN TEXAS) 151-178 426-512 PRECURSOR PVGLF_NDVTG FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS (STRAIN 151-178 426-512 PRECURSOR TEXAS G.B./48)PVGLF_NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS (STRAINULSTER/67) 151-178 426-512 PRECURSOR PVGLF_PHODV FUSION GLYCOPROTEINPHOCINE DISTEMPER VIRUS 36-63 221-262 309-336 PRECURSOR PVGLF_PI1HCFUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS (STRAIN C39) 147-174210-266 PRECURSOR PVGLF_PI2H FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2VIRUS 90-117 141-175 238-266 483-528 PRECURSOR PVGLF_PI2HG FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528PRECURSOR (STRAIN GREER) PVGLF_PI2HT FUSION GLYCOPROTEIN HUMANPARAINFLUENZA 2 VIRUS 90-117 141-175 238-266 483-528 PRECURSOR (STRAINTOSHIBA) PVGLF_PI3B FUSION GLYCOPROTEIN BOVINE PARAINFLUENZA 3 VIRUS115-182 207-241 459-497 PRECURSOR PVGLF_PI3H4 FUSION GLYCOPROTEIN HUMANPARAINFLUENZA 3 VIRUS 115-182 207-241 459-497 PRECURSOR (STRAIN N1H47885) PVGLF_RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS (STRAIN KABETEO) 224-265 458-485 PRECURSOR PVGLF_RINDL FUSION GLYCOPROTEIN RINDERPESTVIRUS (STRAIN L) 224-265 458-506 PRECURSOR PVGLF_SEND5 FUSIONGLYCOPROTEIN SENDAI VIRUS (STRAIN Z/HOST MUTANTS) 122-149 211-245480-507 PRECURSOR PVGLF_SENDF FUSION GLYCOPROTEIN SENDAI VIRUS (STRAINFUSHIMI) 122-149 211-245 480-507 PRECURSOR PVGLF_SENDH FUSIONGLYCOPROTEIN SENDAI VIRUS (STRAIN HARRIS) 122-149 211-245 480-507PRECURSOR PVGLF_SENDJ FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ)122-149 211-245 480-507 PRECURSOR PVGLF_SENDZ FUSION GLYCOPROTEIN SENDAIVIRUS (STRAIN Z) 122-149 211-245 480-507 PRECURSOR PVGLF_SV41 FUSIONGLYCOPROTEIN SIMIAN VIRUS 41 144-185 241-269 459-496 PRECURSOR PVGLF_SV5FUSION GLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 137-171 417-444 PRECURSORPVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS VIRUS 124-161193-200 457-484 PRECURSOR PVGLG_BEFV SPIKE GLYCOPROTEIN BOVINE EPHEMERALFEVER VIRUS 523-557 PRECURSOR PVGLG_BRSVC MAJOR SURFACE BOVINERESPIRATORY SYNCYTIAL VIRUS 92-123 GLYCOPROTEIN G (STRAIN COPENHAGEN)PVGLG_HRSV1 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 63-93GLYCOPROTEIN G (SUBGROUP B/STRAIN 18537) PVGLG_HRSV4 MAJOR SURFACE HUMANRESPIRATORY SYNCYTIAL VIRUS 66-107 GLYCOPROTEIN G (STRAIN RSB5857)PVGLG_HRSV5 MAJOR SURFACE HUMAN RESPIRATORY SYNCYTIAL VIRUS 243-273GLYCOPROTEIN G (STRAIN RSB6190) PVGLG_HRSV8 MAJOR SURFACE HUMANRESPIRATORY SYNCYTIAL VIRUS 66-93 GLYCOPROTEIN G (SUBGROUP B/STRAIN8/60) PVGLG_HSVE4 GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 4271-298 PVGLG_HSVEB GLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 383-410 PVGLG_RABVT SPIKE GLYCOPROTEIN RABIES VIRUS(STRAIN STREET) 489-519 PRECURSOR PVGLG_VSVIG SPIKE GLYCOPROTEINVESICULAR STOMATITIS VIRUS (SEROTYPE 472-499 PRECURSOR INDIANA/STRAINGLASGOW) PVGLH_EBV GLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN B95-8)549-576 619-648 PRECURSOR PVGLH_HCMVA GLYCOPROTEIN H PRECURSOR HUMANCYTOMEGALOVIRUS (STRAIN AD169) 107-136 270-297 PVGLH_HCMVT GLYCOPROTEINH PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) 106-135 PVGLH_HSV6GGLYCOPROTEIN H PRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 62-89360-403 PVGLH_HSVSA GLYCOPROTEIN H PRECURSOR HERPESVIRUS SAIMIRI(STRAINN 11) 388-415 PVGLI_HCMVA IE GLYCOPROTEIN PRECURSOR HUMANCYTOMEGALOVIRUS (STRAIN AD169) 47-111 PVGLM_BUNGE M POLYPROTEINPRECURSOR BUNYAVIRUS GERMISTON 512-546 914-941 1128- 1255 PVGLM_BUNL7 MPOLYPROTEIN PRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 913-950PVGLM_BUNYW M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 340-374 504-535682-709 PVGLM_DUGBV M POLYPROTEIN PRECURSOR DUGBE VIRUS 945-972PVGLM_HANTB M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN B-1) 73-100693-720 PVGLM_HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO)75-102 PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN LEE)75-102 PVGLM_HANTV M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN 76-118)75-102 PVGLM_INSV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS628-655 1069- 1101 PVGLM_PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS69-96 PVGLM_PUUMH M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN HALLNASB1) 72-110 PVGLM_PUUMS M POLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAINSOTKAMO) 72-110 PVGLM_SEOU8 M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN80-39) 513-540 693-720 PVGLM_SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS(STRAIN R22) 73-100 513-540 694-721 PVGLM_SEOUS M POLYPROTEIN PRECURSORSEOUL VIRUS (STRAIN SR-11) 73-100 513-540 694-721 PVGLN_BEFV NONSTRUCTGLYCOPRO GNS BOVINE EPHEMERAL FEVER VIRUS 523-564 PRECURSOR PVGLP_BEVPEPLOMER GLYCOPROTEIN BERNE VIRUS 48-82 1145- 1184- 1505- PRECURSOR 11791211 1532 PVGLY_JUNIN GLYCOPROTEIN POLYPROTEIN JUNIN ARENAVIRUS 14-41PRECURSO PVGLY_LASSG GLYCOPROTEIN POLYPROTEIN LASSA VIRUS (STRAIN GA391)86-113 PRECURSO PVGLY_MOPEI GLYCOPROTEIN POLYPROTEIN MOPEIA VIRUS 86-113316-346 PRECURSO PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PICHINDEARENAVIRUS 334-375 PRECURSO PVGLY_TACV GLYCOPROTEIN POLYPROTEIN TACARIBEVIRUS 109-136 315-350 PRECURSO PVGLY_TACV5 GLYCOPROTEIN POLYPROTEINTACARIBE VIRUS (STRAIN V5) 303-338 PRECURSO PVGLY_TACV7 GLYCOPROTEINPOLYPROTEIN TACARIBE VIRUS (STRAIN V7) 302-337 PRECURSO PVGLY_TACVTGLYCOPROTEIN POLYPROTEIN TACARIBE VIRUS (STRAIN TRVL 11598) 303-338PRECURSO PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS(STRAIN DG) 192-221 PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS(STRAIN B95-8) 104-149 ANTIGEN GP85 PVGP_EBOV STRUCTURAL GLYCOPROTEINEBOLA VIRUS 280-314 PRECURSO PVGP_MABVM STRUCTURAL GLYCOPROTEIN MARBURGVIRUS (STRAIN MUSOKE) 559-589 619-646 PRECURSO PVGP_MABVP STRUCTURALGLYCOPROTEIN MARBURG VIRUS (STRAIN POPP) 559-589 619-646 PRECORSOPVH05_VACCC PROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 132-166PVH05_VACCV PROTEIN H5 VACCINIA VIRUS (STRAIN WR) 132-166 PVH05_VARVPROTEIN H5 VARIOLA VIRUS 64-91 150-184 PVHEL_LSV PROBABLE HELICASE LILYSYMPTOMLESS VIRUS 130-160 PVHRP_VACCC HOST RANGE PROTEIN VACCINIA VIRUS(STRAIN COPENHAGEN) 241-275 PVHRP_VACCV HOST RANGE PROTEIN VACCINIAVIRUS (STRAIN WR) 241-275 PV101_VACCC PROTEIN I1 VACCINIA VIRUS (STRAINCOPENHAGEN) 90-117 153-180 V101_VARV PROTEIN I1 VARIOLA VIRUS 90-117153-180 V103_VACCC PROTEIN I3 VACCINIA VIRUS (STRAIN COPENHAGEN) 160-190V103_VACCV PROTEIN I3 VACCINIA VIRUS (STRAIN WR) 160-190 V103_VARVPROTEIN I3 VARIOLA VIRUS 160-190 V108_VACCC PUTATIVE RNA HELICASE 18VACCINIA VIRUS (STRAIN COPENHAGEN) 290-317 548-575 593-632 V108_VACCVPUTATIVE RNA HELICASE 18 VACCINIA VIRUS (STRAIN WR) 290-317 548-575593-632 V108_VARV PUTATIVE RNA HELICASE 18 VARIOLA VIRUS) 290-317548-575 593-632 VIE1_MCMVS IMMEDIATE-EARLY PROTEIN 1 MURINECYTOMEGALOVIRUS (STRAIN SMITH) 261-288 VIE2_NPVOP IMMEDIATE-EARLY ORGYIAPSEUDOTSUGATA MULTICAPSID 355-385 PROTEIN IE-2 POLYHEDROSIS VIRUSVIEN_NPVAC IE-REG PROTEIN IE-N AUTOGRAPHA CALIFORNICA NUCLEAR 217-325343-400 POLYHEDROSIS VIRUS VIF_HV1RH VIRION INFECTIVITY FACTOR HUMANIMMUNODEFICIENCY VIRUS TYPE 1 62-89 (RF/HAT ISOLATE) VIF_SIVAI VIRIONINFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY VIRUS 2-36 (ISOLATE AGM/CLONEGRI-1) VIMP_HSVEB PROB INTEGRAL MEMBRANE EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 147-174 PROTEIN VIMP_HSVSA INTEGRAL MEMBRANE HERPESVIRUSSAIMIRI (STRAIN 11) 80-107 PROTEIN VINT_SSV1 PROBABLE INTEGRASESULFOLOBUS VIRUS-LIKE PARTICLE SSV1 73-100 VJ01_VACCC PROTEIN J1VACCINIA VIRUS (STRAIN COPENHAGEN) 22-56 VJ01_VACCV PROTEIN J1 VACCINIAVIRUS (STRAIN WR) 22-56 VJ01_VARV PROTEIN J1 VARIOLA VIRUS 22-56VL1_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) PAPILLOMAVIRUS331-383 (STRAIN KANSAS) VL1_FPVL PROBABLE L1 PROTEIN AVIANPAPILLOMAVIRUS FPV-L 38-65 VL1_HPV08 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 8 354-392 VL1_HPV18 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 18 183-210 VL1_HPV33 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33 19-46 VL1_HPV41 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 345-372 VL1_HPV51 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51 19-46 VL1_HPV58 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58 45-72 VL2_HPV1A PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A 407-445 VL2_HPV41 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 415-442 VL3_REOVD MINOR CORE PROTEIN REOVIRUS(TYPE 3/STRAIN DEARING) 330-357 LAMBDA 3 VL3_REOVL MINOR CORE PROTEINREOVIRUS (TYPE 1/STRAIN LANG) 330-357 LAMBDA 3 VL96_IRV1 L96 PROTEINTIPULA IRIDESCENT VIRUS 146-180 625-652 PVM1_REOVL MINOR VIRIONSTRUCTURAL REOVIRUS (TYPE 1/STRAIN LANG) 290-317 PROTEIN MU PVM21_REOVDMAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 625-662MU-1/MU- PVM22_REOVD MAJOR VIRION STRUC PROTEIN REOVIRUS (TYPE 3/STRAINDEARING) 624-661 MU-1/MU- PVM2_REOVJ MAJOR VIRION STRUC PROTEIN REOVIRUS(TYPE 2/STRAIN D5/JONES) 624-661 MU-1/MU- PVM3_REOVD MAJOR NONSTRUCTURALREOVIRUS (TYPE 3/STRAIN DEARING) 159-186 343-370 456-483 631-690 PROTEINMU-N PVMA2_BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY SYNCYTIALVIRUS 124-152 (STRAIN A51908) PVMA2_HRSVA MATRIX GLYCOPROTEIN M2 HUMANRESPIRATORY SYNCYTIAL VIRUS 124-151 (STRAIN A2) PVMAT_BRSVA MATRIXPROTEIN BOVINE RESPIRATORY SYNCYTIAL VIRUS 219-246 (STRAIN A51908)PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY SYNCYTIAL VIRUS 219-246(STRAIN A2) PVMAT_INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAINC/JJ/50) 151-185 PVMAT_NDVA MATRIX PROTEIN NEWCASTLE DISEASE VIRUS(STRAIN 247-274 AUSTRALIA-VICTORIA/32) PVMAT_PI2HT MATRIX PROTEIN HUMANPARAINFLUENZA 2 VIRUS 96-123 (STRAIN TOSHIBA) PVMAT_PI3B MATRIX PROTEINBOVINE PARAINFLUENZA 3 VIRUS 201-231 PVMAT_PI3H4 MATRIX PROTEIN HUMANPARAINFLUENZA 3 VIRUS 201-231 (STRAIN NIH 47885) PVMAT_SV41 MATRIXPROTEIN SIMIAN VIRUS 41 323-353 PVME1_CVBM E1 GLYCOPROTEIN BOVINECORONAVIRUS (STRAIN MEBUS) 175-209 PVME1_CVTKE E1 GLYCOPROTEIN TURKEYENTERIC CORONAVIRUS 175-209 PVME1_IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS 21-48 184-218 (STRAIN 6/82) PVME1_IBVB E1 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS VIRUS 21-48 184-218 (STRAIN BEAUDETTE)PVME1_IBVB2 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 21-48184-218 (STRAIN BEAUDETTE M42) PVME1_IBVK E1 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS VIRUS 184-218 (STRAIN KB8523) PVMP_CAMVC MOVEMENTPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN CM-1841) 220-254 273-324PVMP_CAMVD MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN D/H) 29-56220-254 273-324 PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS(STRAIN BBC) 227-254 273-324 PVMP_CAMVN MOVEMENT PROTEIN CAULIFLOWERMOSAIC VIRUS (STRAIN NY8153) 220-254 273-324 PVMP_CAMVS MOVEMENT PROTEINCAULIFLOWER MOSAIC VIRUS 220-254 273-324 (STRAIN STRASBOURG) PVMP_CAMVWMOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN W260) 220-254 273-324PVMP_CERV MOVEMENT PROTEIN CARNATION ETCHED RING VIRUS 26-53 100-127PVMP_SOCMV MOVEMENT PROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 4-31 78-118PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 294-328PRECURSOR PVMT1_DHVI1 MATRIX PROTEIN 1 DHORI VIRUS (STRAININDIAN/1313/61) 38-65 237-264 PVMT8_MYXVL M-T8 PROTEIN MYXOMA VIRUS(STRAIN LAUSANNE) 163-190 PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAINLAUSANNE) 465-492 PVN34_ROTPC NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS(GROUP C/STRAIN COWDEN) 83-113 NS34 PVNCN_PAVBO PROBABLE NONCAPSIDBOVINE PARVOVIRUS 149-176 PROTEIN NP1 PVNCS_ADVG NONCAPSID PROTEIN NS-1ALEUTIAN MINK DISEASE PARVOVIRUS (STRAIN G) 86-148 PVNCS_AEDEV NONCAPSIDPROTEIN NS-1 AEDES DENSONUCLEOSIS VIRUS 14-41 279-339 487-517 585-612780-817 821-848 (STRAIN GK V 002 002) PVNCS_MUMIM NONCAPSID PROTEIN NS-1MURINE MINUTE VIRUS (STRAIN MVMI) 35-62 262-289 PVNCS_MUMIV NONCAPSIDPROTEIN NS-1 MURINE MINUTE VIRUS 35-62 262-289 PVNCS_PAVHB NONCAPSIDPROTEIN NS-1 HUMAN PARVOVIRUS B19 236-270 PVNCS_PAVHH NONCAPSID PROTEINNS-1 HAMSTER PARVOVIRUS H1 35-62 PVNCS_PAVPN NONCAPSID PROTEIN NS-1PORCINE PARVOVIRUS (STRAIN NADL-2) 24-55 169-196 316-346 PVNS1_EHDV2NONSTRUCTURAL PROTEIN NS1 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 411-438(SEROTYPE 2/STRAIN ALBERTA) PVNS1_IAALA NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ALASKA/6/77) 171-198 PVNS1_IAANNNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ANN ARBOR/6/60)171-198 PVNS1_IACHI NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAINA/CHILE/1/83) 171-198 PVNS1_IACKG NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN 171-198 A/CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN 168-195 A/CHICKEN/JAPAN/24)PVNS1_IADA2 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198A/DUCK/ALBERTA/60/76) PVNS1_IAFOM NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN 171-198 A/FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/FORT/WARREN/1/50)PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198A/LENINGRAD/134/57) PVNS1_IAMA6 NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN 171-198 A/MALLARD/ALBERTA/88/76) PVNS1_IAPI1 NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198 A/PINTAIL/ALBERTA/121/79)PVNS1_IAPI3 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198A/PINTAIL/ALBERTA/358/79) PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN 171-198 A/TURKEY/BETHLEHEM-GLILIT/1492-B/82)PVNS1_IATKC NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN 171-198A/TURKEY/CANADA/63) PVNS1_IATRT NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN 171-198 A/TERN/TURKMENIA/18/72) PVNS1_IAUDO NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/UDORN/307/72) 171-198PVNS1_IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAINA/USSR/90/77) 171-198 PVNS1_INBPA NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN B/PA/79) 171-198 PVNS2_IATKR NONSTRUCTURAL PROTEIN NS2INFLUENZA A VIRUS (STRAIN 87-114 A/TURKEY/OREGON/71) PVNS2_INBLENONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAIN B/LEE/40) 51-78PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2 INFLUENZA B VIRUS (STRAINB/YAMAGATA/1/73) 51-78 PVNS2_INCJJ NONSTRUCTURAL PROTEIN NS2 INFLUENZA CVIRUS (STRAIN C/JJ/50) 71-98 PVNS3_CVPFS NONSTRUCTURAL PROTEIN 3-1PORCINE TRANSMISSIBLE GASTROENTERITIS 9-36 CORONAVIRUS (STRAIN FS772PVNS4_CVH22 NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS (STRAIN 229E) 9-36PVNS4_RSV NONSTRUCTURAL PROTEIN NS4 RICE STRIPE VIRUS 6-40 PVNS7_CVCAENONSTRUCTURAL PROTEIN 7 CANINE ENTERIC CORONAVIRUS (STRAIN K378) 11-45PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONA VIRUS 8-42(STRAIN 79-1683) PVNS7_CVPFS NONSTRUCTURAL PROTEIN 7 PORCINETRANSMISSIBLE GASTROENTERITIS 34-61 CORONAVIRUS (STRAIN FS772PVNS7_CVPPU NONSTRUCTURAL PROTEIN 7 PORCINE TRANSMISSIBLEGASTROENTERITIS 34-61 CORONAVIRUS (STRAIN PURD PVNS7_CVPRM NONSTRUCTURALPROTEIN 7 PORCINE RESPIRATORY CORONAVIRUS 34-61 PVNS7_FIPV NONSTRUCTURALPROTEIN 7 FELINE INFECTIOUS PERITONITS VIRUS 8-42 (STRAIN 79-1146)PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 41-75(STRAIN CI-14/83) PVNSC_PI3H4 NONSTRUCTURAL PROTEIN C HUMANPARAINFLUENZA 3 VIRUS 58-99 (STRAIN NIH 47885) PVNSM_INSV NONSTRUCTURALPROTEIN IMPATIENS NECROTIC SPOT VIRUS 262-296 NS-M PVNST_BUNLCNONSTRUCTURAL PROTEIN BUNYAVIRUS LA CROSSE 57-84 NS-S PVNST_TOSVNONSTRUCTURAL PROTEIN TOSCANA VIRUS 146-180 NS-S PVNUC_EBOVNUCLEOPROTEIN EBOLA VIRUS 311-369 PVNUC_IAANA NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378-405 A/ANAS ACUTA/PRIMORJE/695/76) PVNUC_IAANNNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ANN ARBOR/6/60)PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/BRAZIL/11/78)378-405 PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/CALIFORNIA/10/78) PVNUC_IACKG NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 378-405 A/CHICKEN/GERMANY/N/49) PVNUC_IACKPNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADAU NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/DUCK/AUSTRALIA/749/80) PVNUC_IADBE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/BEIJING/1/78) PVNUC_IADCZNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/DUCK/ENGLAND/1/) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378-405 A/DUCK/ENGLAND/1/62) PVNUC_IADHK NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/HONG KONG/7/75) PVNUC_IADM2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/MEMPHIS/928/74)PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/DUCK/MANITOBA/1/53) PVNUC_IADNZ NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/DUCK/NEW ZEALAND/31/76) PVNUC_IADU2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/DUCK/UKRAINE/2/60) PVNUC_IAEN5NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/ENGLAND/19/55)PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FORTMONMOUTH/1/47) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/FORT WARREN/1/50) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/FOWL PLAGUE VIRUS/DOBSON/‘DUTCH’/27) PVNUC_IAFPRNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/FOWL PLAGUEVIRUS/ROSTOCK/34) PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 378-405 A/GULL/MARYLAND/5/77) PVNUC_IAGU2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/704/77) PVNUC_IAGU3NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MARYLAND/1824/78)PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/GULL/MARYLAND/1815/79) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUM NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/GULL/MASSACHUSETTS/26/80)PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/GULL/MINNESOTA/945/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/HICKOX/40) 378-405 PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/EQUINE/JILLIN/1/89) PVNUC_IAHLO NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/LONDON/1416/73) PVNUC_IAHMINUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/EQUINE/MIAMI/1/63)PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/68)378-405 PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/HONGKONG/5/83) 378-405 PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 378-405 A/EQUINE/TENNESSEE/5/86) PVNUC_IAKIE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/KIEV/59/79) 378-405 PVNUC_IALENNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/LENINGRAD/54/1) 378-405PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/MALLARD/NEW YORK/6750/78) PVNUC_IAMIN NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/MINK/SWEDEN/84) PVNUC_IANEJNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/NEW JERSEY/8/76)PVNUC_IANT6 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/NT/60/68) 378-405PVNUC_IAOHI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/OHIO/4/83) 378-405PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/PARROT/ULSTER/73) PVNUC_IAUPE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/PUERTO RICO/8/34) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC_IASE0NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SEAL/MASSACHUSETTS/1/80) PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/SHEARWATER/AUSTRALIA/72) PVNUC_IAS1N NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/SINGAPORE/1/57) PVNUC_IATE1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TEAL/ICELAND/29/80)PVNUC_IATKN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/TURKEY/MINNESOTA/1661/81) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/TURKEY/ONTARIO/7732/66) PVNUC_IATRS NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/TERN/SOUTH AFRICA/61) PVNUC_IATRTNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/TERN/TURKMENIA/18/72)PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/TEXAS/1/77)378-405 PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAINA/UDORN/307/72) 378-405 PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/USSR/90/77) 378-405 PVNUC_IAVI6 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/VICTORIA/5/68) 378-405 PVNUC_IAWHN NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/MAINE/328/84) PVNUC_IAWHPNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/WHALE/PACIFICOCEAN/19/76) PVNUC_IAWIL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/WILSON-SMITH/33) PVNUC_IAWIS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/WISCONSIN/3523/88) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/SWINE/29/37) 378-405 PVNUC_IAZ41 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/SWINE/41/49) 378-405 PVNUC_IAZCA NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 378-405 A/SWINE/CAMBRIDGE/1/35) PVNUC_IAZDANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/DANDONG/9/83)PVNUC_IAZGE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SWINE/GERMANY/2/81) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/SWINE/HONG KONG/6/76) PVNUC_IAZH3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONG KONG/126/82) PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/HONGKONG/127/82) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SWINE/IOWA/15/30) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN378-405 A/SWINE/IOWA/1976/31) PVNUC_IAZI3 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/SWINE/IOWA/46) 378-405 PVNUC_IAZJ1 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/437/76) PVNUC_JAZJ2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/ITALY/2/79)PVNUC_IAZJ3 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SWINE/ITALY/141/81) PVNUC_JAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/JAMESBURG/42) PVNUC_IAZMANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/SWINE/MAY/54) 378-405PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SWINE/NETHERLANDS/12/85) PVNUC_IAZOH NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 378-405 A/SWINE/OHIO/23/35) PVNUC_IAZON NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN 378-405 A/SWINE/ONTARIO/2/81) PVNUC_IAZTE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/TENNESSEE/24/77) PVNUC_IAZW1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405 A/SWINE/WISCONSIN/1/57)PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 378-405A/SWINE/WISCONSIN/1/61) PVNUC_INCCA NUCLEOPROTEIN INFLUENZA C VIRUS(STRAIN 99-126 416-443 451-478 C/CALIFORNIA/78) PVNUC_MABVMNUCLEOPROTEIN MARBURG VIRUS (STRAIN MUSOKE) 366-407 PVNUC_MABVPNUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP) 366-407 PVO01_VACCC PROTEIN O1VACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 109-138 581-608 PVO01_VARVPROTEIN O1 VARIOLA VIRUS 7-37 109-138 581-608 PVOR1_FXMV 152 KD PROTEINFOXTAIL MOSAIC VIRUS 1023- 1050 PVOR1_NMV 186 KD PROTEIN NARCISSUSMOSAIC VIRUS 996-1023 1527- 1561 PVOR1_PMV 176 KD PROTEIN PAPAYA MOSAICPOTEXVIRUS 948-978 1481- 1532 PVOR1_PVMR 223 KD PROTEIN POTATO VIRUS M(STRAIN RUSSIAN) 597-627 PVOR1_PVX 165 KD PROTEIN POTATO VIRUS X 698-7251017- 1044 PVOR1_PVXX3 165 KD PROTEIN POTATO VIRUS X (STRAIN X3) 698-7251017- 1044 PVOR1_SMYEA 150 KD PROTEIN STRAWBERRY MILD YELLOWEDGE-ASSOCIATED 312-342 691-721 VIRUS PVP10_NPVAC P10 PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR 7-41 POLYHEDROSIS VIRUS PVP10_NPVOP P10 PROTEINORGYIA PSEUDOTSUGATA MULTICAPSID 7-48 POLYHEDROSIS VIRUS PVP10_NPVSE P10PROTEIN SPODOPTERA EXIGUA NUCLEAR POLYHEDROSIS 6-33 37-64 VIRUS (STRAINUS) PVP10_RGDV NONSTRUCTURAL PROTEIN RICE GALL DWARF VIRUS 205-242 PNS10PVP10_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 151-181 227-254 PNS10PVP11_RDV NONSTRUCTURAL PROTEIN RICE DWARF VIRUS 53-80 PNS11 PVP12_WTVNONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 81-108 PNS12 PVP18_WTVNJNONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS (STRAIN NJ) 81-108 PNS12PVP19_AMCV CORE PROTEIN P19 ARTICHOKE MOTTLED CRINKLE VIRUS 73-100PVP19_TBSVC CORE PROTEIN P19 TOMATO BUSHY STUNT VIRUS (STRAIN CHERRY)73-100 PVP23_HSVSA PROBABLE CAPSID PROTEIN HERPESVIRUS SAIMIRI (STRAIN11) 2-29 VP23 PVP26_HSVEB CAPSID PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1(STRAIN AB4P) 36-63 PVP26_HSVSA CAPSID PROTEIN VP26 HERPESVIRUS SAIMIRI(STRAIN 11) 48-75 PVP2_AHSV4 OUTER CAPSID PRPOTEIN VP2 AFRICAN HORSESICKNESS VIRUS 277-304 410-437 632-662 907-934 (SEROTYPE 4/STRAINVACCINE) PVP2_BTV13 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE13/ISOLATE USA) 815-846 PVP2_BTV1A OUTER CAPSID PROTEIN VP2 BLUETONGUEVIRUS (SEROTYPE 898-925 1/ISOLATE AUSTRALIA) PVP2_BTV1S OUTER CAPSIDPROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 119-146 1/ISOLATE SOUTH AFRICA)PVP2_EHDV1 OUTER CAPSID PROTEIN VP2 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS72-103 415-453 (SEROTYPE 1) PVP2_ROTBR RNA-BINDING PROTEIN VP2 BOVINEROTAVIRUS (STRAIN RF) 39-94 523-553 PVP2_ROTBU RNA-BINDING PROTEIN VP2BOVINE ROTAVIRUS (STRAIN UK) 39-94 524-554 PVP2_ROTHW RNA-BINDINGPROTEIN VP2 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 70-101 533-567PVP2_ROTPC RNA-BINDING PROTEIN VP2 PORCINE ROTAVIRUS (GROUP C/STRAINCOWDEN) 52-99 128-156 518-545 705-746 PVP2_ROTS1 RNA-BINDING PROTEIN VP2SIMIAN 11 ROTOVIRUS (STRAIN SA11) 36-96 PVP30_ASFE7 PHOSPHOPROTEIN P30AFRICAN SWINE FEVER VIRUS (STRAIN E-75) 39-75 PVP32_ASFB7 PHOSPHOPROTEINP32 AFRICAN SWINE FEVER VIRUS (STRAIN BA71V) 39-75 PVP35_EBOV POLYMERASECOMPLEX EBOLA VIRUS 83-119 PROTEIN VP35 PVP35_MABVM POLYMERASE COMPLEXMARBURG VIRUS (STRAIN MUSOKE) 80-107 231-258 PROTEIN VP35 PVP35_MABVPPOLYMERASE COMPLEX MARBURG VIRUS (STRAIN POPP) 80-107 231-258 PROTEINVP35 PVP35_NPVAC EARLY 35 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR270-297 POLYHEDROSIS VIRUS PVP35_NPVBM EARLY 35 KD PROTEIN BOMBYX MORINUCLEAR POLYHEDROSIS VIRUS 68-102 PVP35_VACCV IMMUNODOM ENV PRO P35VACCINIA VIRUS (STRAIN WR) 178-205 PVP39_NPVAC MAJOR CAPSID PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 134-161 264-291 POLYHEDROSIS VIRUSPVP39_NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID263-290 POLYHEDROSIS VIRUS PVP3_AHSV4 VP3 CORE PROTEIN AFRICAN HORSESICKNESS VIRUS 132-159 (SEROTYPE 4/STRAIN VACCINE) PVP3_BTV10 VP3 COREPROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 214-252 PVP3_BTV17VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ISOLATE USA) 214-252PVP3_BTV1A VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 214-252AUSTRALIA) PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASEVIRUS 209-243 798-832 (SEROTYPE 1) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTICHEMORRHAGIC DISEASE VIRUS 798-832 (SEROTYPE 2/STRAIN AUSTRAL PVP3_GFLVP3 PROTEIN GRAPEVINE FANLEAF VIRUS 99-133 PVP3_ROTPC INNER CORE PROTEINVP3 PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 39-66 329-384 PVP3_ROTS1INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 26-67 350-377451-497 619-692 PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAINB95-8) 440-470 PVP40_HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI(STRAIN 11) 205-232 344-372 PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUSLARYNGOTRACHEITIS VIRUS 515-549 (STRAIN THORNE V882) PVP40_VZVD CAPSIDPROTEIN P40 VARICELLA-ZOSTER VIRUS (STRAIN DUMAS) 174-208 495-522PVP41_ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11)8-35 589-619 PVP42_ROTS1 OUTER CAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS(STRAIN SA11) 8-35 584-622 PVP4A_VACCC MAJOR CORE PROTEIN P4A VACCINIAVIRUS (STRAIN COPENHAGEN) 48-75 PRECURSOR PVP4A_VACCV MAJOR CORE PROTEINP4A VACCINIA VIRUS (STRAIN WR) 48-75 PRECURSOR PVP4A_VARV MAJOR COREPROTEIN P4A VARIOLA VIRUS 48-75 PRECURSOR PVP4B_FOWPV MAJOR CORE PROTEINP4B FOWLPOX VIRUS 80-110 PRECURSOR PVP4B_VACCC MAJOR CORE PROTEIN P4BVACCINIA VIRUS (STRAIN COPENHAGEN) 7-37 PRECURSOR PVP4B_VACCV MAJOR COREPROTEIN P4B VACCINIA VIRUS (STRAIN WR) 7-37 PRECURSOR PVP4B_VARV MAJORCORE PROTEIN P4B VARIOLA VIRUS 7-37 PRECURSOR PVP4_BTV10 VP4 COREPROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 34-61 576-603PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 13/ISOLATE USA)34-61 576-603 PVP4_BTV13 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE2/ISOLATE USA) 34-61 576-603 PVP4_BTV2A OUTER CAPSID PROTEIN VP4NEBRASKA CALF DIARRHEA VIRUS 552-622 (STRAIN NCDV-LINCOLN) PVP4_NCDVOUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641)595-629 PVP4_ROTB4 OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS (STRAINC486) 8-35 584-622 PVP4_ROTBC OUTER CAPSID PROTEIN VP4 BOVINE ROTAVIRUS(STRAIN UK) 595-629 PVP4_ROTBU OUTER CAPSID PROTEIN VP4 EQUINE ROTAVIRUS(STRAIN H-2) 112-146 235-269 552-629 PVP4_ROTEH OUTER CAPSID PROTEIN VP4ROTAVIRUS (GROUP B/STRAIN IDIR) 5-32 PVP4_ROTG1 OUTER CAPSID PROTEIN VP4HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 1076) 8-35 572-628 PVP4_ROTH1 OUTERCAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN RV-5) 8-35 279-306565-621 PVP4_ROTH5 OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE1/STRAIN 69M) 8-35 112-139 584-629 PVP4_ROTH6 OUTER CAPSID PROTEIN VP4HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN 69M) 8-35 279-306 565-621 PVP4_ROTHDOUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 8-35279-306 565-621 PVP4_ROTHJ OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS(STRAIN K8) 8-35 111-138 PVP4_ROTHK OUTER CAPSID PROTEIN VP4 HUMANROTAVIRUS (STRAIN KU) 8-35 77-104 279-306 577-621 PVP4_ROTHL OUTERCAPSID PROTEIN VP4 HUMAN ROTAVIRUS (STRAIN L26) 8-35 279-306 565-621PVP4_ROTHM OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAINM37) 8-35 572-610 PVP4_ROTHN OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS(SEROTYPE 3/STRAIN MCN13) 8-35 573-628 PVP4_ROTHP OUTER CAPSID PROTEINVP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN P) 8-35 577-621 PVP4_ROTHR OUTERCAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 3/STRAIN RRV) 8-38 105-135235-262 PVP4_ROTHT OUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE4/STRAIN 8-35 572-627 ST. THOMAS 3) PVP4_ROTHV OUTER CAPSID PROTEIN VP4HUMAN ROTAVIRUS (SEROTYPE 4/STRAIN VA70) 8-35 279-306 590-617 PVP4_ROTHWOUTER CAPSID PROTEIN VP4 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 8-35577-621 PVP4_ROTP5 OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (SEROTYPE5/STRAIN OSU) 112-146 584-625 PVP4_ROTPC OUTER CAPSID PROTEIN VP4PORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 5-33 115-161 293-320PVP4_ROTPG OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS (STRAIN GOTTFRIED)8-35 572-628 PVP4_ROTPY OUTER CAPSID PROTEIN VP4 PORCINE ROTAVIRUS(STRAIN YM) 8-35 112-146 584-625 PVP4_ROTRH OUTER CAPSID PROTEIN VP4RHESUS ROTARVIRUS 8-38 584-622 PVP4_ROTSF OUTER CAPSID PROTEIN VP4SIMIAN 11 ROTAVIRUS (STRAIN SA11-FEM) 8-35 589-619 PVP4_ROTSS OUTERCAPSID PROTEIN VP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11-SEM) 8-35 130-157584-622 PVP4_WTV NONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 28-62 PNS4PVP5_AHSV4 OUTER CAPSID PROTEIN VP5 AFRICAN HORSE SICKNESS VIRUS 113-183191-218 (SEROTYPE 4/STRAIN VACCINE) PVP5_BTV10 OUTER CAPSID PROTEIN VP5BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 53-80 99-126 PVP5_BTV11 OUTERCAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 11/ISOLATE USA) 53-8092-126 PVP5_BTV13 OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE13/ISOLATE USA) 53-80 PVP5_BTV1A OUTER CAPSID PROTEIN VP5 BLUETONGUEVIRUS (SEROTYPE 1/ISOLATE 53-80 89-126 AUSTRALIA) PVP5_BTV1S OUTERCAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 53-80 92-126148-182 SOUTH AFRICA) PVP5_BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUEVIRUS (SEROTYPE 2/ISOLATE USA) 53-80 89-126 PVP5_EHDV1 OUTER CAPSIDPROTEIN VP5 EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 31-80 191-218 399-426(SEROTYPE 1) PVP5_WTV OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS 648-675PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA)161-193 PVP61_MRDV PROB NONSTRUCT 41.0 KD PRO MAIZE ROUGH DWARF VIRUS153-202 PVP61_NPVAC 61 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 36-63POLYHEDROSIS VIRUS PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE10/ISOLATE USA) 157-189 PVP64_NPVOP MAJOR ENV GLYCOPRO ORGYIAPSEUDOTSUGATA MULTICAPSID 45-72 PRECURSOR POLYHEDROSIS VIRUS PVP67_NPVACMAJOR ENV GLYCOPRO AUTOGRAPHA CALIFORNICA NUCLEAR 44-81 PRECURSORPOLYHEDROSIS VIRUS PVP6_BTV11 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE11/ISOLATE USA) 157-189 PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS(SEROTYPE 13/ISOLATE USA) 157-189 PVP6_BTV17 VP6 PROTEIN BLUETONGUEVIRUS (SEROTYPE 17/ISOLATE USA) 157-189 PVP6_BTV1S VP6 PROTEINBLUETONGUE VIRUS (SEROTYPE 1/ISOLATE 161-193 SOUTH AFRICA) PVP6_BTV2AVP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ISOLATE USA) 133-172 PVP6_RDVSTRUCTURAL PROTEIN P6 RICE DWARF VIRUS 10-37 354-381 PVP74_NPVAC P74PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 413-440 POLYHEDROSIS VIRUSPVP75_HSVSA PROBABLE MEMBRANE HERPESVIRUS SAIMIRI (STRAIN 11) 181-208929-977 ANTIGEN 75 PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICANUCLEAR 44-78 370-397 POLYHEDROSIS VIRUS PVP7_EHDV1 VP7 CORE PROTEINEPIZOOTIC HEMORRHAGIC DISEASE VIRUS 16-43 (SEROTYPE 1) PVP7_WTVNONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 458-485 PNS7 PVP80_NPVAC CAPSIDPROTEIN P80 AUTOGRAPHA CALIFORNICA NUCLEAR 101-142 240-298 POLYHEDROSISVIRUS PVP87_NPVOP CAPSID PROTEIN P87 ORGYIA PSEUDOTSUGATA MULTICAPSID132-159 POLYHEDROSIS VIRUS PVP8_BTV10 NONSTRUCTURAL PROTEIN P8BLUETONGUE VIRUS (SEROTYPE 10/ISOLATE USA) 105-132 PVP8_FOWPV STRUCTURALPROTEIN VP8 FOWLPOX VIRUS 211-238 PRECURSOR PVP8_WTV OUTER CAPSIDPROTEIN P8 WOUND TUMOR VIRUS 29-56 112-143 PVP9_RDV NONSTRUCTURALPROTEIN RICE DWARF VIRUS 197-224 PNS9 PVP9_WTV STRUCTURAL PROTEIN P9WOUND TUMOR VIRUS 22-49 PVP9_WTNVJ STRUCTURAL PROTEIN P9 WOUND TUMORVIRUS (STRAIN NJ) 22-49 PVPHE_NPVAC 29 KD POLYHEDRAL ENVELOPE AUTOGRAPHACALIFORNICA NUCLEAR 196-223 PROTEIN POLYHEDROSIS VIRUS PVPHE_NPVOP 32 KDPOLYHEDRAL ENVELOPE ORGYIA PSEUDOTSUGATA MULTICAPSID 127-186 238-265PROTEIN POLYHEDROSIS VIRUS PVPRT_ADEM1 ENDOPROTEASE MOUSE ADENOVIRUSTYPE 1 167-194 PVPU_HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE1 3-31 (ARV2/SF2 ISOLATE) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 5-48 (BH10 AND HXB3 ISOLATES) PVPU_HV1B8 VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 21-48 (BH8 ISOALTE) PVPU_HV1BN VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (BRAIN ISOLATE) PVPU_HV1BR VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (BRU ISOLATE)PVPU_HV1C4 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 3-30 (CDC-451ISOLATE) PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33(ELI ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 15-48 (HXB2 ISOLATE) PVPU_HV1J3 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 2-29 (JH3 ISOLATE) PVPU_HV1JR VPU PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 22-49 (JRCSF ISOLATE) PVPU_HV1MA VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 5-32 (MAL ISOLATE) PVPU_HV1ND VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 6-33 (NDK ISOLATE) PVPU_HV1PV VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 5-48 (PV22 ISOLATE)PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 22-49 (SF162ISOLATE) PVPU_SIVCZ VPU PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 51-78PVPX_LDV VPX PROTEIN LACTATE DEHYDROGENASE-ELEVATING VIRUS 64-94PVRNA_BSMV ALPHA-A PROTEIN BARLEY STRIPE MOSAIC VIRUS 1051- 1078PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 6-43PVS06_ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN ADRV) 114-144PVS06_ROTGI VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN IDIR) 28-55PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS 9-44 PVS06_ROTPC VP6 PROTEINPORCINE ROTAVIRUS (GROUP C/STRAIN COWDEN) 9-44 PVS07_ROTBJ GLYCOPROTEINVP7 BOVINE ROTAVIRUS (STRAIN KN-4) 2-29 PVS07_ROTBU NONSTRUCTURALPROTEIN BOVINE ROTAVIRUS (STRAIN UK) 91-146 199-236 NCVP3 PVS07_ROTP5NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS (SEROTYPE 5/STRAIN OSU) 91-146202-236 NCVP3 PVS07_ROTS1 NONSTRUCTURAL PROTEIN SIMIAN 11 ROTAVIRUS(STRAIN SA11) 91-146 199-236 NCVP3 PVS08_ROTBU NONSTRUCTURAL PROTEINBOVINE ROTAVIRUS (STRAIN UK) 164-201 NS2/VP9 PVS08_ROTS1 NONSTRUCTURALPROTEIN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 164-201 217-251 NCVP4PVS09_ROTB4 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 6/STRAIN B641)2-29 PVS09_ROTB5 GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN A5) 2-29PVS09_ROTBU GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN UK) 2-29PVS09_ROTGA GLYCOPROTEIN VP7 ROTAVIRUS (GROUP B/STRAIN ADRV) 210-237PRECURSOR PVS09_ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE4/STRAIN RV-4) 2-29 PVS09_ROTHA GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(SEROTYPE 2/STRAIN HU5) 2-29 PVS09_ROTHB GLYCOPROTEIN VP7 HUMANROTAVIRUS (SEROTYPE G/STRAIN B37) 2-29 PVS09_ROTHD GLYCOPROTEIN VP7HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 2-29 PVS09_ROTHH GLYCOPROTEINVP7 HUMAN ROTAVIRUS (SEROTYPE 2/STRAIN HN126) 2-29 PVS09_ROTHMGLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN M37) 2-29PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN MO 2-29AND STRAIN D) PVS09_ROTHP GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE3/STRAIN P) 2-29 PVS09_ROTHS GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE2/STRAIN S2) 2-29 PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE1/STRAIN WA) 2-29 PVS09_ROTP2 GLYCOPROTEIN VP7 PORCINE ROTAVIRUS(SEROTYPE 3/STRAIN AT/76) 2-29 PVS09_ROTP3 GLYCOPROTEIN VP7 PORCINEROTAVIRUS (SEROTYPE 3/STRAIN CRW-8) 2-29 PVS09_ROTS1 GLYCOPROTEIN VP7SIMIAN 11 ROTAVIRUS (STRAIN SA11) 2-29 PVS10_ROTBS MINOR OUTER CAPSIDPROTEIN BOVINE ROTAVIRUS (GROUP C/STRAIN SHINTOKU) 125-152 PVS10_ROTS1NONSTRUCTURAL GLYCO- SIMIAN 11 ROTAVIRUS (STRAIN SA11) 113-140 PROTEINNCVP5 PVS11_ROTBU MINOR OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAINUK) 13-40 114-145 PVS11_ROTBV MINOR OUTER CAPSID PROTEIN BOVINEROTAVIRUS (STRAIN VMRI) 13-40 114-145 PVS11_ROTGA NONSTRUCTURAL PROTEINROTAVIRUS (GROUP B/STRAIN ADRV) 31-60 (ADULT DIARRHEA ROTAVIRUS)PVS11_ROTH5 MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE2/STRAIN RV-5) 13-40 111-145 PVS11_ROTHD MINOR OUTER CAPSID PROTEINHUMAN ROTAVIRUS (SEROTYPE 2/STRAIN DS1) 13-40 111-145 PVS11_ROTHW MINOROUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/STRAIN WA) 111-145PVS11_ROTRA MINOR OUTER CAPSID PROTEIN RABBIT ROTAVIRUS (STRAIN ALABAMA)118-145 PVS11_ROTS1 MINOR OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS(STRAIN SA11) 111-146 PVSH_MUMP1 SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS9-46 PVSH_MUMPA SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN MATSUYAMA)12-41 PVSH_MUMPB SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN BELFAST)9-41 PVSH_MUMPE SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAIN ENDERS)9-46 PVSH_MUMPJ SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS (STRAINJERYL-LYNN) 9-46 PVSH_MUMPK SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS(STRAIN KILHAM) 9-46 PVSH_MUMPL SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS(STRAIN BRISTOL 1) 9-46 PVSH_MUMPM SMALL HYDROPHOBIC PROTEIN MUMPS VIRUS(STRAIN MIYAHARA VACCINE) 12-41 PVSH_MUMPR SMALL HYDROPHOBIC PROTEINMUMPS VIRUS (STRAIN RW) 9-41 PVSH_MUMPU SMALL HYDROPHOBIC PROTEIN MUMPSVIRUS (STRAIN URABE VACCINE AM9) 12-41 PVSI1_REOVD SIGMA 1 PROTEINPRECURSOR REOVIRUS (TYPE 3/STRAIN DEARING) 26-63 71-122 127-168 222-259PVSI1_REOVJ SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE 2/STRAIN D5/JONES)4-104 130-193 PVSI1_REOVL SIGMA 1 PROTEIN PRECURSOR REOVIRUS (TYPE1/STRAIN LANG) 4-52 75-104 112-160 PVSI2_REOVD SIGMA 2 PROTEIN REOVIRUS(TYPE 3/STRAIN DEARING) 350-384 PVSI3_REOVJ SIGMA 3 PROTEIN REOVIRUS(TYPE 2/STRAIN D5/JONES) 289-316 PVSIS_REOVD SIGMA 1-S PROTEIN REOVIRUS(TYPE 3/STRAIN DEARING) 90-117 PVSIS_REOVL SIGMA 1-S PROTEIN REOVIRUS(TYPE 1/STRAIN LANG) 50-77 PVT3A_CAPV1 PROTEIN T3A CAPRIPOXVIRUS (STRAININS-1) 124-158 PVT5_SFVKA PROTEIN T5 SHOPE FIBROMA VIRUS (STRAIN KASZA)250-277 PVTER_EBV PROBABLE DNA PACKAGING EPSTEIN-BARR VIRUS (STRAINB95-8) 234-290 PROTEIN PVTER_HCMVA PROBABLE DNA PACKAGING HUMANCYTOMEGALOVIRUS (STRAIN AD169) 417-451 PROTEIN PVTER_HSV6U PROBABLE DNAPACKAGING HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 176-203 PROTEINUGANDA-1102) PVTER_HSVI1 PROBABLE DNA PACKAGING ICTALURID HERPESVIRUS 1710-737 PROTEIN PVTER_VZVD PROBABLE DNA PACKAGING VARICELLA-ZOSTER VIRUS(STRAIN DUMAS) 394-321 PROTEIN PVTP3_TTV1V VIRAL PROTEIN TPXTHERMOPROTEUS TENAX VIRUS 1 (STRAIN VT3) 169-196 PVTPX_TTV1 VIRALPROTEIN TPX THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 169-196 PVV_PI4HAV PROTEIN HUMAN PARAINFLUENZA 4A VIRUS 4-38 (STRAIN TOSHIBA) PY101_SSV1HYPOTHETICAL 10.1 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 25-65 PROTEINPY108_SSV1 HYPOTHETICAL 10.8 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 4-61PROTEIN PY119_SSV1 HYPOTHETICAL 11.9 KD SULFOLOBUS VIRUS-LIKE PARTICLESSV1 30-78 PROTEIN PY11K_TYDVA HYPOTHETICAL 11.2 KD TOBACCO YELLOW DWARFVIRUS 53-87 PROTEIN (STRAIN AUSTRALIA) PY13K_NPVAC HYPOTH 13.1 KD IN 39KD AUTOGRAPHA CALIFORNICA NUCLEAR 85-112 5′REGION POLYHEDROSIS VIRUSPY13K_SSV1 HYPOTHETICAL 13.2 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV159-86 PROTEIN PY14K_SSV1 HYPOTHETICAL 13.7 KD SULFOLOBUS VIRUS-LIKEPARTICLE SSV1 5-39 PROTEIN PY16K_NPVAC HYPOTH IN 39 KD PROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 80-107 5′REGION POLYHEDROSIS VIRUSPY16K_SSV1 HYPOTHETICAL 15.6 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV177-111 PROTEIN PY17K_SSV1 HYPOTHETICAL 17.8 KD SULFOLOBUS VIRUS-LIKEPARTICLE SSV1 9-36 119-153 PROTEIN PY18K_MSVN HYPOTHETICAL 17.7 KD MAIZESTREAK VIRUS (NIGERIAN ISOLATE) 34-61 PROTEIN PY18K_MSVS HYPOTHETICAL17.2 KD MAIZE STREAK VIRUS (SOUTH-AFRICAN ISOLATE) 34-61 PROTEINPY20K_SSV1 HYPOTHETICAL 20.4 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV176-103 PROTEIN PY28K_SSV1 HYPOTHETICAL 28.5 KD SULFOLOBUS VIRUS-LIKEPARTICLE SSV1 93-164 PROTEIN PY2_SOCMV HYPOTHETICAL PROTEIN 2 SOYBEANCHLOROTIC MOTTLE VIRUS 118-148 PY31K_SSV1 HYPOTHETICAL 31.5 KDSULFOLOBUS VIRUS-LIKE PARTICLE SSV1 24-97 PROTEIN PY32K_SSV1HYPOTHETICAL 31.7 KD SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 233-267 PROTEINPY38K_NPVAC HYPOTHETICAL 37.7 KD AUTOGRAPHA CALIFORNICA NUCLEAR 133-184PROTEIN POLYHEDROSIS VIRUS PY3_SOCMV HYPOTHETICAL PROTEIN 3 SOYBEANCHLOROTIC MOTTLE VIRUS 122-149 PY7_SOCMV HYPOTHETICAL PROTEIN 7 SOYBEANCHLOROTIC MOTTLE VIRUS 56-94 PY85K_SSV1 HYPOTHETICAL 85.7 KD SULFOLOBUSVIRUS-LIKE PARTICLE SSV1 81-121 546-573 658-700 PROTEIN PY8_SOCMVHYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE VIRUS 13-40 PYB01_FOWPMHYPOTHETICAL BAMHI-ORF1 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 74-108152-179 184-218 PROTEIN PYB05_FOWPM HYPOTHETICAL BAMHI-ORF5 FOWLPOXVIRUS (ISOLATE HP-438[MUNICH]) 62-89 PROTEIN PYB10_FOWPM HYPOTHETICALBAMHI-ORF10 FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 162-197 214-241PROTEIN PYB12_FOWPM HYPOTHETICAL BAMHI-ORF12 FOWLPOX VIRUS (ISOLATEHP-438[MUNICH]) 11-38 PROTEIN PYB13_FOWPM HYPOTHETICAL BAMHI-ORF13FOWLPOX VIRUS (ISOLATE HP-438[MUNICH]) 128-167 PROTEIN PYBL3_FOAMV BEL-3PROTEIN HUMAN SPUMARETROVIRUS 87-116 PYDH1_HSVS7 HYPOTH 24.1 KD IN DHFRHERPESVIRUS SAIMIRI (STRAIN 484-77) 161-188 3′REGION PYDH1_HSVSC HYPOTH28.7 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUP C/STRAIN 488) 52-823′REGION PYDH4_HSVSC HYPOTH 9.9 KD IN DHFR HERPESVIRUS SAIMIRI (SUBGROUPC/STRAIN 488) 53-83 3′REGION PYF26_FOWP1 HYPOTHETICAL 25.9 KD FOWLPOXVIRUS (STRAIN FP-1) 8-35 PROTEIN PYF30_FOWP1 HYPOTHETICAL 30.9 KDFOWLPOX VIRUS (STRAIN FP-1) 170-204 PROTEIN PYH22_VACCV HYPOTH 21.7 KDHINDIII-C PRO VACCINIA VIRUS (STRAIN WR) 37-64 95-126 144-171PYHR3_VACCV HYPOTH HOST RANGE 27.4 KD VACCINIA VIRUS (STRAIN WR) 31-58179-206 PRO PYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS (STRAINB95-8) 90-121 PROTEIN PYKR4_EBV HYPOTHETICAL BKRF4 EPSTEIN-BARR VIRUS(STRAIN B95-8) 19-53 PROTEIN PYL15_ADE41 HYPOTH 12.4 KD IN 33 KD HUMANADENOVIRUS TYPE 41 47-86 REGION PYLR3_EBV HYPOTHETICAL BLRF3 PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 27-54 PYOR1_COYMV HYPOTHETICAL 23 KDPROTEIN COMMELINA YELLOW MOTTLE VIRUS 94-143 PYOR2_COYMV HYPOTHETICAL 15KD PROTEIN COMMELINA YELLOW MOTTLE VIRUS 35-76 PYOR3_WCMVM HYPOTHETICAL13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN M) 64-94 PYOR3_WCMVOHYPOTHETICAL 13 KD PROTEIN WHITE CLOVER MOSAIC VIRUS (STRAIN O) 65-95PYOR5_ADEG1 HYPOTHETICAL 31.5 KD AVIAN ADENOVIRUS GALI (STRAIN PHELPS)92-119 PROTEIN PYORA_TTV1 HYPOTHETICAL 8.1 KD PROTEIN THERMOPROTEUSTENAX VIRUS 1 (STRAIN KRA1) 23-57 PYORL_TTV1 HYPOTHETICAL 26.8 KDTHERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1) 15-42 PROTEIN PYORQ_TTV1HYPOTHETICAL 7.3 KD PROTEIN THERMOPROTEUS TENAX VIRUS 1 (STRAIN KRA1)3-31 PROTEIN PYORW_TTV1 HYPOTHETICAL 12.1 KD THERMOPROTEUS TENAX VIRUS 1(STRAIN KRA1) 4-40 PROTEIN PYP12_RTBV HYPOTHETICAL P12 PROTEIN RICETUNGRO BACILLIFORM VIRUS 44-71 PYP12_RTBVP HYPOTHETICAL P12 PROTEIN RICETUNGRO BACILLIFORM VIRUS 44-71 (ISOLATE PHILIPPINES) PYP24_RTBVHYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 59-101 106-157PYP24_RTBVP HYPOTHETICAL P24 PROTEIN RICE TUNGRO BACILLIFORM VIRUS51-101 106-157 (ISOLATE PHILIPPINES) PYP46_RTBV HYPOTHETICAL P46 PROTEINRICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 PYP46_RTBVP HYPOTHETICALP46 PROTEIN RICE TUNGRO BACILLIFORM VIRUS 58-107 197-231 (ISOLATEPHILIPPINES) PYP63_NPVAC HYPOTH PRO P6.5 5′REGION AUTOGRAPHA CALIFORNICANUCLEAR 44-71 POLYHEDROSIS VIRUS PYP63_NPVOP HYPOTH 40.0 KD IN P6.5ORGYIA PSEUDOTSUGATA MULTICAPSID POLYHEDROSIS VIRUS 325-352 5′REGIONPYPOH_NPVAC HYPOTH 23.6 KD IN AUTOGRAPHA CALIFORNICA NUCLEAR 116-153POLYHEDRIN 5′REGION POLYHEDROSIS VIRUS PYPOL_IPNVN HYPOTHETICAL 17.0 KDINFECTIOUS PANCREATIC NECROSIS VIRUS 5-32 PROTEIN (STRAIN N1) PYQ3_AMEPVHYPOTHETICAL PROTEIN IN AMSACTA MOOREI ENTOMOPOXVIRUS 8-57 59-96 156-183TK 3′REGION PYRF1_HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEX VIRUS(TYPE 6/STRAIN GS) 208-235 PYRF2_HSV6G HYPOTHETICAL PROTEIN RF2 HERPESSIMPLEX VIRUS (TYPE 6/STRAIN GS) 223-257 268-299 PYRF3_HSV6GHYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 141-168PYRF4_HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS (TYPE 6/STRAINGS) 404-441 PYRP2_IRV6 REPETITIVE PROTEIN ORF2 CHILO IRIDESCENT VIRUS10-45 PYVAG_VACCC HYPOTHETICAL 9.3 KD PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 7-34 PYVAH_VACCC HYPOTHETICAL 14.5 KD VACCINIA VIRUS (STRAINCOPENHAGEN) 81-112 PROTEIN PYVDB_VACCC HYPOTHETICAL 8.5 KD PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN) 29-77 PYVDB_VACCV HYPOTHETICAL 8.5 KDPROTEIN VACCINIA VIRUS (STRAIN WR) 46-77 PYVDH_VACCV HYPOTHETICAL 7.2 KDPROTEIN VACCINIA VIRUS (STRAIN WR) 20-50 PYVGB_VACCC HYPOTHETICAL 8.4 KDPROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN) 10-44 PYZL2_EBV HYPOTHETICALBZLF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 152-179

TABLE VII 107 × 178 × 4 SEARCH MOTIF RESULTS SUMMARY (PREFERRED VIRALSEQUENCES) PCGENE 107 × 178 × 4 All Viruses (no bacteriophages) FILENAME PROTEIN VIRUS AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA8 AREA 9 PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS 453-480PENV_MLVAV ENV POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 517-544 PPOL_MLVAVPOL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS 805-832 PMYC_AVIM2 MYCTRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 232-266 375-402 VIRUS CMIIPMYC_AVIMD MYC TRANSFORMING PROTEIN AVIAN MYELOCYTOMATOSIS 233-267376-403 VIRUS HBI PMYC_AVIMC MYC TRANSFORMING PROTEIN AVIANMYELOCYTOMATOSIS 233-267 376-403 VIRUS MC29 VL1_FPVL PROBABLE L1 PROTEINAVIAN PAPILLOMA VIRUS 38-65 FPV-L PVGLB_HSVB1 GLYCOPROTEIN I BOVINEHERPES VIRUS TYPE 1 427-454 PRECURSOR PRIR2_HSVB3 RIBONUC-DIPHOSPHREDUCT BOVINE HERPES VIRUS TYPE 1 90-117 SMALL CHA (STRAIN 34)PVGLB_HSVB2 GLYCOPROTEIN B-1 BOVINE HERPES VIRUS TYPE 2 447-474PRECURSOR (STRAIN BMV) PENV_BIV06 ENV POLYPROTEIN BOVINEIMMUNODEFICIENCY 17-44 544-603 631-695 VIRUS (ISOLATE 106) PENV_BIV27ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 17-44 573-632 660-724 (ISOLATE127) PENV_BLVAF ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377 (AMERICANISOLATE FLK) PENV_BLVAV ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 304-377(AMERICAN ISOLATE VDM) PENV_BLVAU ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS304-377 (AUSTRALIAN ISOLATE) PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIAVIRUS 311-377 (BELGIUM ISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINELEUKEMIA VIRUS 304-377 (BELGIUM ISOLATE LB59) PENV_BLVJ ENV POLYPROTEINBOVINE LEUKEMIA VIRUS 304-377 (JAPANESE ISOLATE BLV-1) PHEMA_PI3BHEMAGGLUTININ- BOVINE PARAINFLUENZA 3 66-93 NEURAMINIDASE VIRUSPRRPP_PI3B RNA POLYMERASE ALPHA BOVINE PARAINFLUENZA 3 34-91 255-282285-314 SUBUNIT VIRUS PVGLF_PI3B FUSION GLYCOPROTEIN BOVINEPARAINFLUENZA 3 115-182 207-241 459-497 PRECURSOR VIRUS PVMAT_PI3BMATRIX PROTEIN BOVINE PARAINFLUENZA 3 201-231 VIRUS PRRPP_BRSVA RNAPOLYMERASE ALPHA BOVINE RESPIRATORY 99-133 SUBUNIT SYNCYTIAL VIRUS(STRAIN A51908) PVGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65154-202 216-243 442-469 486-531 PRECURSOR SYNCYTIAL VIRUS (STRAINA51908) PVMA2_BRSVA MATRIX GLYCOPROTEIN M2 BOVINE RESPIRATORY 124-152SYNCYTIAL VIRUS (STRAIN A51908) PVMAT_BRSVA MATRIX PROTEIN BOVINERESPIRATORY 219-246 SYNCYTIAL VIRUS (STRAIN A51908) PVGLF_BRSVC FUSIONGLYCOPROTEIN BOVINE RESPIRATORY 38-65 154-202 216-243 444-471 488-533PRECURSOR SYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLG_BRSVC MAJOR SURFACEBOVINE RESPIRATORY 92-123 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAINCOPENHAGEN) PVGLF_BRSVR FUSION GLYCOPROTEIN BOVINE RESPIRATORY 38-65154-202 216-243 444-471 488-533 PRECURSOR SYNCYTIAL VIRUS (STRAIN RB94)PENV_MLVCB ENV POLYPROTEIN CAS-BR-E MURINE LEUKEMIA 510-539 VIRUSPENV_SIVCZ ENV POLYPROTEIN CHIMPANZEE IMMUNO- 160-187 253-289 336-366526-584 627-654 DEFICIENCY VIRUS PVPU_SIVCZ VPU PROTEIN CHIMPANZEEIMMUNO- 51-78 DEFICIENCY VIRUS PPOL_SIVCZ POL POLYPROTEIN CHIMPANZEEIMMUNO- 242-269 626-685 DEFICIENCY VIRUS (SIV(CPZ)) PVE2_CRPVK PROBABLEE2 PROTEIN COTTONTAIL RABBIT (SHOPE) 5-34 PAPILLOMAVIRUS (STRAIN KANSAS)VL1_CRPVK PROBABLE L1 PROTEIN COTTONTAIL RABBIT (SHOPE) 331-383PAPILLOMAVIRUS (STRAIN KANSAS) PPOLG_DEN1S GENOME POLYPROTEIN DENGUEVIRUS TYPE 1 (STRAIN 1858-1885 2890-2935 2989-3016 SINGAPORE S275/90)PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-15711858-1885 2908-2935 2982-3016 3117-3147 16681) PPOLG_DEN27 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2485-25192908-2935 2982-3016 3117-3147 16681-PDK53) PPOLG_DEN2J GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 1544-1571 1858-1885 2908-29353117-3147 3346-3373 JAMAICA) PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUSTYPE 2 (STRAIN 1544-1571 1858-1885 2905-2932 2979-3013 3114-31443343-3370 PR159/S1) PPOLG_DEN2T GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(STRAIN 1134-1161 1448-1475 TONGA 1974) PPOLG_DEN3 GENOME POLYPROTEINDENGUE VIRUS TYPE 3 837-864 1542-1569 1857-1884 2494-2521 2980-30143345-3372 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUS TYPE 4 2885-29302977-3011 3342-3369 PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS5-39 SHANGHAI DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCK HEPATITISB VIRUS 5-39 (STRAIN CHINA) PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS BVIRUS 5-39 304-331 (WHITE SHANGHAI DUCK ISOLATE S31) PTEGU_EBV LARGETEGUMENT EPSTEIN-BARR VIRUS (STRAIN 145-172 1215-1242 1344-13711876-1903 PROTEIN B95-8) PUL06_EBV VIRION PROTEIN BBRF1 EPSTEIN-BARRVIRUS (STRAIN 115-142 313-340 542-569 B95-8) PUL11_EBV HYPOTHETICALPROTEIN EPSTEIN-BARR VIRUS (STRAIN 15-42 BBLF1 B95-8) PUL52_EB PROB DNAREPLICATION EPSTEIN-BARR VIRUS (STRAIN 185-212 787-814 PROTEIN BBLF1B95-8) PUL87_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 409-436B(C)RF1 B95-8) PUL92_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN107-144 168-196 BDLF4 B95-8) PVCAP_EBV MAJOR CAPSID PROTEIN EPSTEIN-BARRVIRUS (STRAIN 847-874 B95-8) PVGL2_EBV PROBABLE MEMBRANE EPSTEIN-BARRVIRUS (STRAIN 68-102 GLYCOPROTEIN B95-8) PVGLB_EBV GLYCOPROTEIN GP110EPSTEIN-BARR VIRUS (STRAIN 95-122 631-658 PRECURSOR B95-8) PVGLH_EBVGLYCOPROTEIN GP85 EPSTEIN-BARR VIRUS (STRAIN 549-576 619-648 PRECURSORB95-8) PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 104-149ANTIGEN GP85 B95-8) PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS(STRAIN 440-470 B95-8) PVTER_EBV PROBABLE DNA EPSTEIN-BARR VIRUS (STRAIN234-290 PACKAGING PROTEIN B95-8) PYKR2_EBV HYPOTHETICAL BKRF2EPSTEIN-BARR VIRUS (STRAIN 90-21 PROTEIN B95-8) PYKR4_EBV HYPOTHETICALBKRF4 EPSTEIN-BARR VIRUS (STRAIN 19-53 PROTEIN B95-8) PYLR3_EBVHYPOTHETICAL BLRF3 EPSTEIN-BARR VIRUS (STRAIN 27-54 PROTEIN B95-8)PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS (STRAIN 152-179 PROTEINB95-8) PBZLF_EBV BZLF1 TRANS-ACTIVATOR EPSTEIN-BARR VIRUS (STRAIN193-220 PROTEIN B95-8) PDNB1_EBV MAJOR DNA-BINDING EPSTEIN-BARR VIRUS(STRAIN 977-1004 1041-1068 PROTEIN B95-8) PEAR_EBV EARLY ANTIGEN PROTEINR EPSTEIN-BARR VIRUS (STRAIN 55-82 B95-8) PLMP1_EBV LATENT MEMBRANEEPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 B95-8) PLMP2_EBV GENETERMINAL PROTEIN EPSTEIN-BARR VIRUS (STRAIN 294-321 B95-8) PLMP1_EBVCLATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1 CAO)PLMP1_EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS (STRAIN 148-175 PROTEIN 1RAJI) PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPESVIRUS TYPE 1 345-375GLYCOPROTEIN 300 PVGLC_HSVEB GLYCOPROTEIN C EQUINE HERPESVIRUS TYPE 1124-151 PRECURSOR PVGLB_HSVE1 GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1443-470 934-961 PRECURSOR (ISOLATE HVS25A) PVGLB_HSVEA GLYCOPROTEIN BEQUINE HERPESVIRUS TYPE 1 443-470 934-961 PRECURSOR (STRAIN AB1)PATI2_HSVEB ALPHA TRANS-IND FACTOR EQUINE HERPESVIRUS TYPE 1 294-321 82KD PRO (STRAIN AB4P) PATIN_HSVEB ALPHA TRANS-IND PROTEIN EQUINEHERPESVIRUS TYPE 1 255-289 (STRAIN AB4P) PHELI_HSVEB PROBABLE HELICASEEQUINE HERPESVIRUS TYPE 1 184-211 321-348 (STRAIN AB4P) PRIRI_HSVEBRIBONUC-DIPHOSPH EQUINE HERPESVIRUS TYPE 1  75-102 REDUCT LARGE CHAS(STRAIN AB4P) PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE1 229-256 566-593 1205-1232 (STRAIN AB4P) PUL06_HSVEB VIRION GENE 56PROTEIN EQUINE HERPESVIRUS TYPE 1 640-667 (STRAIN AB4P) PUL14_HSVEBHYPOTHETICAL GENE 48 EQUINE HERPESVIRUS TYPE 1 247-286 PROTEIN (STRAINAB4P) PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 44-71(STRAIN AB4P) PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1715-749  987-1014 (STRAIN AB4P) PUL52_HSVEB DNA REPLICATION PROTEINEQUINE HERPESVIRUS TYPE 1 193-220 943-970 UL52 (STRAIN AB4P) PVG03_HSVEBGENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 146-176 (STRAIN AB4P)PVGLB_HSVEB GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 443-470 934-961PRECURSOR (STRAIN AB4P) PVGLG_HSVEB GLYCOPROTEIN G EQUINE HERPESVIRUSTYPE 1 383-410 PRECURSOR (STRAIN AB4P) VIMP_HSVEB PROB INTEGRAL MEMBRANEEQUINE HERPESVIRUS TYPE 1 147-174 PROTEIN (STRAIN AB4P) PVP26_HSVEBCAPSI PROTEIN VP26 EQUINE HERPESVIRUS TYPE 1 36-63 (STRAIN AB4P)PVG03_HSVEK GENE 3 PROTEIN EQUINE HERPESVIRUS TYPE 1 146-176 (STRAINKENTUCKY A) PVGLB_HSVEL GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 443-470933-960 PRECURSOR (STRAIN KENTUCKY D) PCELF_HSVEB CELL FUSION PROTEINEQUINE HERPESVIRUS TYPE 1 312-339 PRECURSOR (STRAINS AB4P and Ky A)PUL47_HSVE4 97 KD ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE 4 190-27PVGLB_HSVE4 GLYCOPROTEIN B EQUINE HERPES VIRUS TYPE 4 486-513 616-643PRECURSOR PVGLG_HSVE4 GLYCOPROTEIN G EQUINE HERPES VIRUS TYPE 4 271-298PRECURSOR PDUT_HSVE4 DEOXYU 5′-TRIPHOSPH EQUINE HERPESVIRUS TYPE 4 90-117 NUCHYDROLASE (STRAIN 1942) PVE2_PAPVE PROBABLE E2 PROTEINEUROPEAN ELK PAPILLOMA- 120-150 VIRUS PENV_FIVPE ENV POLYPROTEIN FELINEIMMUNODEFICIENCY 650-680 722-749 VIRUS (ISOLATE PETALUMA) PPOL_FIVPE POLPOLYPROTEIN FELINE IMMUNODEFICIENCY 442-473 VIRUS (ISOLATE PETALUMA)PENV_FIVSD ENV POLYPROTEIN FELINE IMMUNODEFICIENCY 639-668 720-747 VIRUS(ISOLATE SAN DIEGO) PENV_FIVT2 ENV POLYPROTEIN FELINE IMMUNODEFICIENCY640-679 721-748 VIRUS (ISOLATE TM2) PENV_FLVC6 ENV POLYPROTEIN FELINELEUKEMIA PROVIRUS 509-538 (CLONE CFE-6) PMYC_FLVTT MYC TRANSFORMINGFELINE LEUKEMIA PROVIRUS 393-420 PROTEIN FTT PMYC_FLV MYC TRANSFORMINGFELINE LEUKEMIA VIRUS 393-420 PROTEIN PENV_FLVGL ENV POLYPROTEIN FELINELEUKEMIA VIRUS 490-519 (STRAIN A/GLASGOW-1) PENV_FLVLB ENV POLYPROTEINFELINE LEUKEMIA VIRUS 510-539 (STRAIN LAMBDA-B1) PENV_FLVSA ENVPOLYPROTEIN FELINE LEUKEMIA VIRUS 487-516 (STRAIN SARMA) PENV_MLVF5 ENVPOLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE 57) PENV_MLVTFENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATE FB29)PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 523-553 VIRUS (ISOLATEPVC-211) PENV_GALV ENV POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 176-203523-564 PGAG_GALV GAG POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 396-442447-474 PPOL_GALV POL POLYPROTEIN GIBBON APE LEUKEMIA VIRUS 535-562676-703 PDPOL_HPBGS DNA POLYMERASE GROUND SQUIRREL HEPATITIS 271-325VIRUS PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-2371021-1048 1117-1149 1454-1481 18F) PPOLG_HPAV2 GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1117-1149 1454-1481 24A)PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-2371021-1048 1117-1149 1454-1481 43C) PPOLG_HPAVC GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 203-237 CR326) PPOLG_HPAVG GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 182-216 GA76) PPOLG_HPAVH GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN 203-237 1021-1048 1103-1149 HM-175)PPOLG_HPAVL GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 203-2371021-1048 1103-1149 LA) PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN 203-237 1021-1048 1103-1149 MBB) PDPOL_HPBVP DNA POLYMERASEHEPATITIS B VIRUS (SUBTYPE 456-483 ADW/STRAIN PHILIPPINO/ PFDW294)PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 443-470 ADYW)PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 702-729PPOLG_HCVBK GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-7291045-1072 BK) PPOLG_HCVH GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATEH) 702-729 1045-1072 PPOLG_HCJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE 374-401 2089-2116 HC-J6) PPOLG_HCVJ8 GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE 1049-1076 2089-2116 HC-J8) PPOLG_HCVJT GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE 702-729 1045-1072 HC-JT)PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 378-405702-729 1045-1072 JAPANESE) PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE 702-729 1045-1072 TAIWAN) PAANT_HDVAM DELTA ANTIGENHEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVD3 DELTAANTIGEN HEPATITIS DELTA VIRUS 106-133 (ISOLATE AMERICAN) PAANT_HDVS1DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATE AMERICAN)PAANT_HDVS2 DELTA ANTIGEN HEPATITIS DELTA VIRUS 16-43 106-133 (ISOLATEAMERICAN) PAANT_HDVWO DELTA ANTIGEN HEPATITIS DELTA VIRUS 106-133(ISOLATE AMERICAN) PAANT_HDVIT DELTA ANTIGEN HEPATITIS DELTA VIRUS106-133 (ISOLATE AMERICAN) PAANT_HDVM2 DELTA ANTIGEN HEPATITIS DELTAVIRUS 106-133 (ISOLATE AMERICAN) PPOLN_HEVBU NON-STRUCTURAL POLY-HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEIN BURMA) PPOLN_HEVMENON-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246 349-376 PROTEINMEXICO) PPOLN_HEVMY N-STRUCTURAL POLY- HEPATITIS E VIRUS (STRAIN 219-246349-376 PROTEIN MYANMAR) PPOLN_HEVPA NON-STRUCTURAL POLY- HEPATITIS EVIRUS (STRAIN 218-245 348-375 PROTEIN PAKISTAN) PDPOL_HPBHE DNAPOLYMERASE HERON HEPATITIS B VIRUS 5-39 PVMSA_HPBHE MAJOR SURFACEANTIGEN HERON HEPATITIS B VIRUS 294-328 PRECURSOR PIE63_HSV11TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 248-275 REGULATOR IE63 (TYPE1/STRAIN 17) PIE68_HSV11 IMMEDIATE-EARLY HERPES SIMPLEX VIRUS 40-67PROTEIN IE68 (TYPE 1/STRAIN 17) PTEGU_HSV11 LARGE TEGUMENT HERPESSIMPLEX VIRUS 667-694 1673-1710 PROTEIN (TYPE 1/STRAIN 17) PUL06_HSV11VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS 586-613 (TYPE 1/STRAIN 17)PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS 116-143 (TYPE1/STRAIN 17) PUL37_HSV11 PROTEIN UL37 HERPES SIMPLEX VIRUS 470-497853-884 (TYPE 1/STRAIN 17) PUL42_HSV11 DNA-BINDING PROTEIN UL42 HERPESSIMPLEX VIRUS 231-258 (TYPE 1/STRAIN 17) PUL47_HSV11 VIRION PROTEIN UL47HERPES SIMPLEX VIRUS 488-515 (TYPE 1/STRAIN 17) PVGLC_HSV11 GLYCOPROTEINC HERPES SIMPLEX VIRUS 469-510 PRECURCOR (TYPE 1/STRAIN 17) PAT12_HSV11ALPHA TRANS-IND FACTOR HERPES SIMPLEX VIRUS 308-335 78 KD PRO (TYPE1/STRAIN 17) PUL47_HSV1F VIRION PROTEIN UL47 HERPES SIMPLEX VIRUS488-515 (TYPE 1/STRAIN F) PAT12_HSV1F ALPHA TRANS-IND FACTOR HERPESSIMPLEX VIRUS 308-335 77 KD PRO (TYPE 1/STRAIN F) PVGLC_HSV1KGLYCOPROTEIN C HERPES SIMPLEX VIRUS 469-510 PRECURSOR (TYPE 1/STRAINKOS) PVGLE_HSV2 GLYCOPROTEIN E HERPES SIMPLEX VIRUS 111-148 PRECURSOR(TYPE 2) PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 102-129228-262 567-611 962-993 1098-1181 1661-1688 1884-1911 (TYPE 6/STRAIN GS)PVGLH_HSV6G GLYCOPROTEIN H HERPES SIMPLEX VIRUS 62-89 360-403 PRECURSOR(TYPE 6/STRAIN GS) PYRF1_HSV6G HYPOTHETICAL PROTEIN RF1 HERPES SIMPLEXVIRUS 208-235 (TYPE 6/STRAIN GS) PYRF2_HSV6G HYPOTHETICAL PROTEIN RF2HERPES SIMPLEX VIRUS 223-257 268-299 (TYPE 6/STRAIN GS) PYRF3_HSV6GHYPOTHETICAL PROTEIN RF3 HERPES SIMPLEX VIRUS 141-168 (TYPE 6/STRAIN GS)PYRF4_HSV6G HYPOTHETICAL PROTEIN RF4 HERPES SIMPLEX VIRUS 404-441 (TYPE6/STRAIN GS) PP100_HSV6J MAJOR ANTIGENIC HERPES SIMPLEX VIRUS 81-108189-216 688-715 785-812 STRUCTL PROTEIN (TYPE 6/STRAIN UGANDA-1102)PUL87_HSV6U HYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 536-563 729-768(TYPE 6/STRAIN UGANDA-1102) PUL95_HSV6U HYPOTHETICAL PROTEIN 13R HERPESSIMPLEX VIRUS  73-100 105-134 (TYPE 6/STRAIN UGANDA-1102) PVCAP_HSV6UMAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS 136-170 355-382 (TYPE 6/STRAINUGANDA-1102) PVTER_HSV6U PROBABLE DNA PACKAGING HERPES SIMPLEX VIRUS176-203 PROTEIN (TYPE 6/STRAIN UGANDA-1102) PTYSY_HSVAT THYMIDYLATESYNTHASE HERPESVIRUS ATELES 116-143 PDPOL_HSVSA DNA POLYMERASEHERPESVIRUS SAIMIRI 625-652 (STRAIN 11) PDUT_HSVSA DEOXYU 5′-TRIPHOSPHHERPESVIRUS SAIMIRI 179-213 NUCHYDROLASE (STRAIN 11) PHEL1_HSVSAPROBABLE HELICASE HERPESVIRUS SAIMIRI 418-449 (STRAIN 11) PIC18_HSVSAPROBABLE PROC & HERPESVIRUS SAIMIRI 58-85 482-522 TRANSPORT PRO (STRAIN11) PIE68_HSVSA IMMEDIATE-EARLY PROTEIN HERPESVIRUS SAIMIRI 48-78(STRAIN 11) PKITH_HSVSA THYMIDINE KINASE HERPESVIRUS SAIMIRI 340-386(STRAIN 11) PRIR1_HSVSA RIBONUC-DIPHOSPH HERPESVIRUS SAIMIRI 324-351REDUCT LARGE CHA (STRAIN 11) PTEGU_HSVSA PROBABLE LARGE HERPESVIRUSSAIMIRI 524-607 672-700 777-814 846-898 949-986  990-1017 1467-14972102-2135 TEGUMENT PROTEIN (STRAIN 11) PTYSY_HSVSA THYMIDYLATE SYNTHASEHERPESVIRUS SAIMIRI 120-147 (STRAIN 11) PUL06_HSVSA VIRION GENE 43PROTEIN HERPESVIRUS SAIMIRI 15-42 302-358 368-402 (STRAIN 11)PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI 34-61 204-231362-389 (STRAIN 11) PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI208-235 (STRAIN 11) PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI31-65 685-737 (STRAIN 11) PUL52_HSVSA PROB DNA REP GENE 56 HERPESVIRUSSAIMIRI 130-157 PROTEIN (STRAIN 11) PUL73_HSVSA HYPOTHETICAL GENE 53HERPESVIRUS SAIMIRI  9-36 PROTEIN (STRAIN 11) PUL87_HSVSA HYPOTHETICALGENE 24 HERPESVIRUS SAIMIRI 582-609 PROTEIN (STRAIN 11) PUL92_HSVSAHYPOTHETICAL GENE 31 HERPESVIRUS SAIMIRI 92-122 PROTEIN (STRAIN 11)PUNG_HSVSA URACIL-DNA GLYCOSYLASE HERPESVIRUS SAIMIRI 135-176 (STRAIN11) PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI 769-799 (STRAIN11) PVG45_HSVSA HYPOTHETICAL GENE 45 HERPESVIRUS SAIMIRI 138-165 PROTEIN(STRAIN 11) PVG48_HSVSA HYPOTHETICAL GENE 48 HERPESVIRUS SAIMIRI 360-394PROTEIN (STRAIN 11) PVG52_HSVSA HYPOTHETICAL GENE 52 HERPESVIRUS SAIMIRI47-74 PROTEIN (STRAIN 11) PVGLH_HSVSA GLYCOPROTEIN H HERPESVIRUS SAIMIRI388-415 PRECURSOR (STRAIN 11) VIMP_HSVSA INTEGRAL MEMBRANE HERPESVIRUSSAIMIRI  80-107 PROTEIN (STRAIN 11) PVP23_HSVSA PROBABLE CAPSID PROTEINHERPESVIRUS SAIMIRI  2-29 VP23 (STRAIN 11) PVP26_HSVSA CAPSID PROTEINVP26 HERPESVIRUS SAIMIRI 48-75 (STRAIN 11) PVP40_HSVSA CAPSID PROTEINP40 HERPESVIRUS SAIMIRI 205-232 344-372 (STRAIN 11) PVP75_HSVSA PROBABLEMEMBRANE HERPESVIRUS SAIMIRI 181-208 929-977 ANTIGEN 75 (STRAIN 11)PDNBI_HSVSA MAJOR DNA-BINDING HERPESVIRUS SAIMIRI 333-368 512-539PROTEIN (STRAIN 11) PCGH2_HSVSA CYCLIN HOMOLOG HERPESVIRUS SAIMIRI127-154 (STRAIN 11) PYDH1_HSVS7 HYPOTH 24.1 KD IN DHFR HERPESVIRUSSAIMIRI 161-188 3′REGION (STRAIN 484-77) PYDH1_HSVSC HYPOTH 28.7 KD INDHFR HERPESVIRUS SAIMIRI 52-82 3′REGION (SUBGROUP C/STRAIN 488)PYDH4_HSVSC HYPOTH 9.9 KD IN HERPESVIRUS SAIMIRI 53-83 3′REGION(SUBGROUP C/STRAIN 488) PENV_MLVHO ENV POLYPROTEIN HOMULV MURINELEUKEMIA 510-540 VIRUS PDPOL_HCMVA DNA POLYMERASE HUMAN CYTOMEGALOVIRUS753-780 (STRAIN AD169) PIC18_HCMVA PROB PROC 7 TRANSPORT HUMANCYTOMEGALOVIRUS 294-324 PRO UL56 (STRAIN AD169) PIR05_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 22-49 IRL5 (STRAIN AD169) PIR12_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  74-162 IRL12 (STRAIN AD169)PIR13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 31-62 IRL13(STRAIN AD169) PRIR1_HCMVA RIBONUC-DIPHOSPH HUMAN CYTOMEGALOVIRUS622-649 REDUCT LARGE CHA (STRAIN AD169) PTEGU_HCMVA PROBABLE LARGE HUMANCYTOMEGALOVIRUS 1251-1281 2202-2229 TEGUMENT PROTEIN (STRAIN AD169)PUL08_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  6-47 UL8 (STRAINAD169) PUL13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 347-374UL13 (STRAIN AD169) PUL16_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS  81-112 UL16 (STRAIN AD169) PUL20_HCMVA HYPOTH PRO UL20HUMAN CYTOMEGALOVIRUS 34-61 PRECURSOR (STRAIN AD169) PUL31_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 167-194 254-284 UL31 (STRAINAD169) PUL35_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 533-562UL35 (STRAIN AD169) PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS114-148 448-485 763-790 802-853 (STRAIN AD169) PUL50_HCMVA PROTEIN UL50HUMAN CYTOMEGALOVIRUS 159-186 (STRAIN AD169) PUL59_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS  74-101 UL59 (STRAIN AD169) PUL70_HCMVAPROB DNA REP PROTEIN UL70 HUMAN CYTOMEGALOVIRUS 65-92 (STRAIN AD169)PUL73_HCMVA UL73 GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS  5-73 PRECURSOR(STRAIN AD169) PUL74_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS45-79 UL74 (STRAIN AD169) PUL93_HCMVA PROTEIN UL93 HUMAN CYTOMEGALOVIRUS26-53 314-381 (STRAIN AD169) PUL95_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 37-71 UL95 (STRAIN AD169) PULA4_HCMVA VIRION PROTEINUL104 HUMAN CYTOMEGALOVIRUS  4-31 443-477 (STRAIN AD169) PULB9_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 33-78 UL119 (STRAIN AD169)PULD0_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS  90-124 UL130(STRAIN AD169) PUS09_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS20-47 HXLF3 (STRAIN AD169) PUS14_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 277-308 HVLF4 (STRAIN AD169) PUS18_HCMVA MEMBRANEPROTEIN HUMAN CYTOMEGALOVIRUS 191-218 HWLF5 (STRAIN AD169) PVGLB_HCMVAGLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 25-88 397-424 440-467 851-878PRECURSOR (STRAIN AD169) PVGLH_HCMVA GLYCOPROTEIN H HUMANCYTOMEGALOVIRUS 107-136 270-297 PRECURSOR (STRAIN AD169) PVGLI_HCMVA IEGLYCOPROTEIN HUMAN CYTOMEGALOVIRUS  47-111 PRECURSOR (STRAIN AD169)PVTER_HCMVA PROBABLE DNA HUMAN CYTOMEGALOVIRUS 417-451 PACKAGING PROTEIN(STRAIN AD169) PDNBI_HCMVA MAJOR DNA-BINDING HUMAN CYTOMEGALOVIRUS437-464 PROTEIN (STRAIN AD169) PV30K_HCMVE 30 KD MAJOR EARLY HUMANCYTOMEGALOVIRUS 194-221 PROTEIN (STRAIN EISENHARDT) PVGLB_HCMVTGLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 50-88 397-424 435-462 852-879PRECURSOR (STRAIN TOWNE) PVGLH_HCMVT GLYCOPROTEIN H HUMANCYTOMEGALOVIRUS 106-135 PRECURSOR (STRAIN TOWNE) PENV_HV1A2 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 544-592 630-682 790-825 VIRUS TYPE 1(ARV2/SF2 ISOLATE) PGAG_HV1A2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 91-118 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PPOL_HV1A2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY 218-245 620-661 VIRUS TYPE 1 (ARV2/SF2 ISOLATE)PVPU_HV1A2 VPU PROTEIN HUMAN IMMUNODEFICIENCY  3-31 VIRUS TYPE 1(ARV2/SF2 ISOLATE) PVPU_HV1B1 VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48VIRUS TYPE 1 (BH10 AND HXB3 ISOLATES) PENV_HV1B1 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (BH10 ISOLATE)PPOL_HV1B1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUSTYPE 1 (BH10 ISOLATE) PPOL_HV1B5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY230-257 632-673 VIRUS TYPE 1 (BH5 ISOLATE) PENV_HV1B8 ENV POLYPROTEINHUMAN IMMUNODEFICIENCY 540-589 626-678 786-813 VIRUS TYPE 1 (BH8ISOLATE) PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY 21-48 VIRUS TYPE1 (BH8 ISOLATE) PENV_HV1BN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY267-294 338-365 562-590 628-679 787-815 VIRUS TYPE 1 (BRAIN ISOLATE)PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (BRAINISOLATE) PENV_HV1BR ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 550-599636-688 796-823 VIRUS TYPE 1 (BRU ISOLATE) PPOL_HV1BR POL POLYPROTEINHUMAN IMMUNODEFICIENCY 230-257 632-673 VIRUS TYPE 1 (BRU ISOLATE)PVPU_HV1BR VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48 VIRUS TYPE 1 (BRUISOLATE) PENV_HV1C4 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 397-424557-606 643-695 803-835 VIRUS TYPE 1 (CDC-451 ISOLATE) PVPU_HV1C4 VPUPROTEIN HUMAN IMMUNODEFICIENCY  3-30 VIRUS TYPE 1 (CDC-451 ISOLATE)PENV_HV1EL ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 255-296 386-413543-591 628-680 VIRUS TYPE 1 (ELI ISOLATE) PNEV_HV1EL NEGATIVE FACTORHUMAN IMMUNODEFICIENCY  81-119 VIRUS TYPE 1 (ELI ISOLATE) PPOL_HVIEL POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 624-660 VIRUS TYPE 1 (ELIISOLATE) PVPU_HV1EL VPU PROTEIN HUMAN IMMUNODEFICIENCY  6-33 VIRUS TYPE1 (ELI ISOLATE) PENV_HV1H2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY545-594 631-683 791-818 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL_HV1H2 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245 620-661 921-951 VIRUS TYPE 1(HXB2 ISOLATE) PVPU_HV1H2 VPU PROTEIN HUMAN IMMUNODEFICIENCY  5-48 VIRUSTYPE 1 (HSB2 ISOLATE) PENV_HV1H3 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY545-594 631-683 791-818 VIRUS TYPE 1 (HSB3 ISOLATE) PENV_HV1J3 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 350-377 556-605 642-694 802-829 VIRUSTYPE 1 (JH3 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 91-118 VIRUS TYPE 1 (JH3 ISOLATE) PVPU_HV1J3 VPU PROTEIN HUMANIMMUNODEFICIENCY  2-29 VIRUS TYPE 1 (JH3 ISOLATE) PENV_HV1JR ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 336-363 622-675 783-811 VIRUS TYPE 1(JRCSF ISOLATE) PPOL_HV1JR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY222-249 624-665 VIRUS TYPE 1 (JRCSF ISOLATE) PVPU_HV1JR VPU PROTEINHUMAN IMMUNODEFICIENCY 22-49 VIRUS TYPE 1 (JRCSF ISOLATE) PENV_HV1MA ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 547-595 633-707 794-826 VIRUS TYPE 1(MAL ISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244476-510 619-660 VIRUS TYPE 1 (MAL ISOLATE) PVPU_HV1MA VPU PROTEIN HUMANIMMUNODEFICIENCY 5-32 VIRUS TYPE 1 (MAL ISOLATE) PENV_HV1MF ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 543-592 629-681 789-816 VIRUS TYPE 1(MFA ISOLATE) PENV_HV1MN ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 343-370567-595 632-684 791-819 VIRUS TYPE 1 (MN ISOLATE) PGAG_HV1MN GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY  87-118 VIRUS TYPE 1 (MN ISOLATE)PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 221-248 623-664 VIRUSTYPE 1 (MN ISOLATE) PENV_HV1ND ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY249-290 536-583 621-673 783-813 VIRUS TYPE 1 (NDK ISOLATE) PNEF_HV1NDNEGATIVE FACTOR HUMAN IMMUNODEFICIENCY  81-119 VIRUS TYPE 1 (NDKISOLATE) PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244624-660 VIRUS TYPE 1 (NDK ISOLATE) PVPU_HV1ND VPU PROTEIN HUMANIMMUNODEFICIENCY  6-33 VIRUS TYPE 1 (NDK ISOLATE) PENV_HV1N5 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 326-360 VIRUS TYPE 1 (NEW YORK-5ISOLATE PPOL_HV1N5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245625-661 VIRUS TYPE 1 (NEW YORK-5 ISOLATE PENV_HV1OY ENV POLYPROTEINHUMAN IMMUNODEFICIENCY 544-591 630-704 789-820 VIRUS TYPE 1 (OY1ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 218-245620-661 VIRUS TYPE 1 (OY1 ISOLATE) PENV_HV1PV ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 545-594 631-683 791-818 VIRUS TYPE 1 (PV22 ISOLATE)PPOL_HV1PV POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 230-257 637-673 VIRUSTYPE 1 (PV22 ISOLATE) PVPU_HV1PV VPU PROTEIN HUMAN IMMUNODEFICIENCY 5-48VIRUS TYPE 1 (PV22 ISOLATE) PENV_HV1RH ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 280-307 351-378 554-602 640-692 800-832 VIRUS TYPE 1(RF/HAT ISOLATE) PPOL_HV1RH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY217-244 619-660 VIRUS TYPE 1 (RF/HAT ISOLATE) VIF_HV1RH VIRIONINFECTIVITY FACTOR HUMAN IMMUNODEFICIENCY 62-89 VIRUS TYPE 1 (RF/HATISOLATE) PENV_HV1SC ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 338-365545-593 631-683 VIRUS TYPE 1 (SC ISOLATE) PENV_HV1S1 ENV POLYPROTEINHUMAN IMMUNODEFICIENCY 333-363 536-585 622-674 782-809 VIRUS TYPE 1(SF162 ISOLATE) PVPU_HV1S1 VPU PROTEIN HUMAN IMMUNODEFICIENCY 22-49VIRUS TYPE 1 (SF162 ISOLATE) PENV_HV1S3 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 541-589 627-679 787-815 VIRUS TYPE 1 (SF33 ISOLATE)PENV_HV1KB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 274-301 555-596637-677 776-824 VIRUS TYPE 1 (STRAIN KB-1-GP32) PPOL_HVIU4 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 513-540 619-660 VIRUS TYPE 1(STRAIN UGANDAN/ISOLATE U) PENV_HV1W1 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 338-365 545-593 631-683 791-818 VIRUS TYPE 1 (WMJ1ISOLATE) PENV_HV1W2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 334-361536-584 622-674 782-809 VIRUS TYPE 1 (WMJ2 ISOLATE) PENV_HV1Z8 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 266-307 573-601 634-678 797-828 VIRUSTYPE 1 (Z-84 ISOLATE) PENV_HV1Z2 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY255-296 542-591 628-680 790-820 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE)PPOL_HV1Z2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 217-244 619-660 VIRUSTYPE 1 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 251-292 VIRUS TYPE 1 (ZAIRE 3 ISOLATE) PENV_HV1Z6 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 256-297 545-593 630-682 792-822 VIRUSTYPE 1 (ZAIRE 6 ISOLATE) PNEF_HV1Z6 NEGATIVE FACTOR HUMANIMMUNODEFICIENCY  86-124 VIRUS TYPE 1 (ZAIRE 6 ISOLATE) PENV_HZ1ZH ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 545-594 627-666 791-823 VIRUS TYPE 1(ZAIRE HZ321 ISOLATE) PENV_HV2BE ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY61-88 532-591 621-648 653-697 VIRUS TYPE 2 (ISOLATE BEN) PGAG_HV2BE GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY  88-115 VIRUS TYPE 2 (ISOLATE BEN)PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-582 VIRUS TYPE 2(ISOLATE BEN) PENV_HV2CA ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 534-593623-650 655-699 VIRUS TYPE 2 (ISOLATE CAM2) PPOL_HV2CA POL POLYPROTEINHUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2 (ISOLATE CAM2) PENV_HV2D1ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 61-88 523-550 555-582 644-688VIRUS TYPE 2 (ISOLATE D194) PGAG_HV2D1 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY  88-115 VIRUS TYPE 2 (ISOLATE D194) PPOL_HV2D1 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY 509-600 VIRUS TYPE 2 (ISOLATE D194)PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 491-568 VIRUS TYPE 2(ISOLATE D205,7) PENV_HV2G1 ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 60-87524-551 556-583 613-640 645-693 VIRUS TYPE 2 (ISOLATE GHANA-1)PPOL_HV2G1 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 471-562 VIRUS TYPE 2(ISOLATE GHANA-1) PENV_HV2NZ ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY61-88 524-551 556-583 613-640 662-689 VIRUS TYPE 2 (ISOLATE NIH-Z)PGAG_HV2NZ GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY  88-115 VIRUS TYPE 2(ISOLATE NIH-Z) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY471-529 VIRUS TYPE 2 (ISOLATE NIH-Z) PENV_HV2RO ENV POLYPROTEIN HUMANIMMUNODEFICIENCY 58-85 533-592 622-698 VIRUS TYPE 2 (ISOLATE ROD)PPOL_HV2RO POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 472-563 VIRUS TYPE 2(ISOLATE ROD) PENV_HV2SB ENV POLYPROTEIN HUMAN IMMUNODEFICIENCY 557-584614-673 VIRUS TYPE 2 (ISOLATE SBLISY) PPOL_HV2SB POL POLYPROTEIN HUMANIMMUNODEFICIENCY 473-562 VIRUS TYPE 2 (ISOLATE SBLISY) PENV_HV2ST ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 442-476 527-554 559-586 648-692 VIRUSTYPE 2 (ISOLATE ST) PGAG_HV2ST GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY88-115 VIRUS TYPE 2 (ISOLATE ST) PPOL_HV2ST POL POLYPROTEIN HUMANIMMUNODEFICIENCY 491-582 VIRUS TYPE 2 (ISOLATE ST) PENV_HV2S2 ENVPOLYPROTEIN HUMAN IMMUNODEFICIENCY 442-476 527-554 559-586 648-682 VIRUSTYPE 2 (ISOLATE ST/24 1C#2) PVE4_HPV11 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS  81-108 TYPE 11 PVE5A_HPV11 PROBABLE E5A PROTEIN HUMANPAPILLOMAVIRUS 30-60 TYPE 11 PVE2_HPV13 E2 PROTEIN HUMAN PAPILLOMAVIRUS157-184 334-361 TYPE 13 PVE2_HPV16 E2 PROTEIN HUMAN PAPILLOMAVIRUS 61-105 312-342 TYPE 16 PVE4_PPV16 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS 66-93 TYPE 16 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS60-87 TYPE 18 PVE2_HPV18 E2 PROTEIN HUMAN PAPILLOMAVIRUS 313-340 TYPE 18PVE4_HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 59-86 TYPE 18PVE6_HPV18 E6 PROTEIN HUMAN PAPILLOMAVIRUS  75-102 TYPE 18 VL1_HPV18PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS 183-210 TYPE 18 PVE2_HPV1A E2PROTEIN HUMAN PAPILLOMAVIRUS 159-186 TYPE 1A VL2_HPV1A PROBABLE L2PROTEIN HUMAN PAPILLOMAVIRUS 407-445 TYPE 1A PVE1_HPV2A E1 PROTEIN HUMANPAPILLOMAVIRUS 21-48 TYPE 2A PVE2_HPV2A E2 PROTEIN HUMAN PAPILLOMAVIRUS159-193 TYPE 2A PVE4_HPV31 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 75-102 TYPE 31 PVE6_HPV31 E6 PROTEIN HUMAN PAPILLOMAVIRUS 69-96 TYPE 31PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS 180-207 TYPE 33 PVE2_HPV33 E2PROTEIN HUMAN PAPILLOMAVIRUS 304-331 TYPE 33 VL1_HPV33 PROBABLE L1PROTEIN HUMAN PAPILLOMAVIRUS 19-46 TYPE 33 PVE2_HPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS 158-192 327-354 TYPE 35 PVE5_HPV35 PROBABLE E5 PROTEINHUMAN PAPILLOMAVIRUS 27-54 TYPE 35 PVE1_HPV39 E1 PROTEIN HUMANPAPILLOMAVIRUS 103-130 TYPE 39 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS  7-34 323-357 TYPE 39 PVE6_HPV39 E6 PROTEIN HUMANPAPILLOMAVIRUS  71-102 TYPE 39 PVE1_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS 55-89 TYPE 41 PVE4_HPV41 PROBABLE E4 PROTEIN HUMANPAPILLOMAVIRUS 63-97 TYPE 41 PVE6_HPV41 E6 PROTEIN HUMAN PAPILLOMAVIRUS119-146 TYPE 41 VL1_HPV41 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS345-372 TYPE 41 VL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS415-442 TYPE 41 PVE1_HPV42 E1 PROTEIN HUMAN PAPILLOMAVIRUS 25-59 TYPE 42PVE6_HPV45 E6 PROTEIN HUMAN PAPILLOMAVIRUS  75-102 TYPE 45 PVE1_HPV47 E1PROTEIN HUMAN PAPILLOMAVIRUS 146-173 TYPE 47 PVE2_HPV47 E2 PROTEIN HUMANPAPILLOMAVIRUS 17-51 148-175 276-303 TYPE 47 PVE2_HPV05 PROBABLE E2PROTEIN HUMAN PAPILLOMAVIRUS 17-51 TYPE 5 PVE4_HPV05 PROBABLE E4 PROTEINHUMAN PAPILLOMAVIRUS 202-229 TYPE 5 PVE2_HPV51 E2 PROTEIN HUMANPAPILLOMAVIRUS 137-184 TYPE 51 PVE6_HPV51 E6 PROTEIN HUMANPAPILLOMAVIRUS 72-99 TYPE 51 VL1_HPV51 PROBABLE L1 PROTEIN HUMANPAPILLOMAVIRUS 19-46 TYPE 51 PVE1_HPV57 E1 PROTEIN HUMAN PAPILLOMAVIRUS21-48 TYPE 57 PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUS 166-193 TYPE 57PVE2_HPV58 E2 PROTEIN HUMAN PAPILLOMAVIRUS  2-36 309-336 TYPE 58VL1_HPV58 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS 45-72 TYPE 58PVE2_HPV5B PROBABLE E2 PROTEIN HUMAN PAPILLOMAVIRUS 17-51 TYPE 5BPVE4_HPV5B PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 202-229 TYPE 5BPVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 11-41 TYPE 5BPVE5A_HPV6B PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 30-60 TYPE 6BPVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 30-60 TYPE 6CVL1_HPV08 PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS 354-392 TYPE 8PVE6_HPVME E6 PROTEIN HUMAN PAPILLOMAVIRUS  71-102 TYPE ME180PRRPP_PI1HB RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 234-261375-416 SUBUNIT VIRUS (STRAIN C35) PNCAP_PI1HC NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 1 377-404 455-482 VIRUS (STRAIN C39) PRRPP_PI1HC RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 1  84-111 234-261 375-416 VIRUS(STRAIN C39) PVGLF_PI1HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1147-174 210-266 PRECURSOR VIRUS (STRAIN C39) PRRPP_PI1HE RNA POLYMERASEALPHA HUMAN PARAINFLUENZA 1  84-111 244-271 375-416 SUBUNIT VIRUS(STRAIN CI-14/83) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMANPARAINFLUENZA 1 41-75 VIRUS (STRAIN CI-14/83) PRRPP_PI1HD RNA POLYMERASEALPHA HUMAN PARAINFLUENZA 1  84-111 232-262 375-416 SUBUNIT VIRUS(STRAIN CI-5/73) PHEMA_PI1HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 1 79-110 366-393 NEURAMINIDASE VIRUS (STRAIN WASHINGTON/ 1957)PNCAP_PI1HW NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 377-404 444-488VIRUS (STRAIN WASHINGTON/ 1957) PRRPP_PI2H RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS PVGLF_PI2H FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 2  90-117 141-175 238-266 483-528PRECURSOR VIRUS PVGLF_PI2HG FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 90-117 114-175 238-266 483-528 PRECURSOR VIRUS (STRAIN GREER)PRRPL_P12HT RNA POLYMERASE BETA HUMAN PARAINFLUENZA 2 322-349 1564-15981687-1721 1901-1946 SUBUNIT VIRUS (STRAIN TOSHIBA) PRRPP_PI2HT RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 2 167-194 222-256 SUBUNIT VIRUS(STRAIN TOSHIBA) PVGLF_PI2HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 90-117 141-175 238-266 483-528 PRECURSOR VIRUS (STRAIN TOSHIBA)PVMAT_PI2HT MATRIX PROTEIN HUMAN PARAINFLUENZA 2  96-123 VIRUS (STRAINTOSHIBA) PHEMA_PI3HA HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61NEURAMINIDASE VIRUS (STRAIN AUS/124854/74 PNCAP_PI3H4 NUCLEOCAPSIDPROTEIN HUMAN PARAINFLUENZA 3 376-403 VIRUS (STRAIN NIH)47885PHEMA_PI3H4 HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASEVIRUS (STRAIN NIH 47885) PRRPL_PI3H4 RNA POLYMERASE BETA HUMANPARAINFLUENZA 3 52-86 136-163 608-638 1081-1123 1994-2036 2115-2142SUBUNIT VIRUS (STRAIN NIH 47885) PRRRP_PI3H4 RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 3 114-144 269-299 SUBUNIT VIRUS (STRAIN NIH 47885)PVGLF_PI3H4 FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 3 115-182 207-241457-497 PRECURSOR VIRUS (STRAIN NIH 47885) PVMAT_PI3HR MATRIX PROTEINHUMAN PARAINFLUENZA 3 201-231 VIRUS (STRAIN NIH 47885) PVNSC_PI3H4NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 3 58-99 VIRUS (STRAIN NIH47885) PHEMA_PI3HV HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61NEURAMINIDASE VIRUS (STRAIN TEX/12677/83) PHEMA_PI3HT HEMAGGLUTININ-HUMAN PARAINFLUENZA 3 27-76 NEURAMINIDASE VIRUS (STRAIN TEX/545/80)PHEMA_PI3HU HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 23-70 NEURAMINIDASEVIRUS (STRAIN TEX/9305/82) PHEMA_PI3HX HEMAGGLUTININ- HUMANPARAINFLUENZA 3 27-61 NEURAMINIDASE VIRUS (STRAIN WASH/1511/73)PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 27-61 NEURAMINIDASEVIRUS (STRAIN WASH/641/79) PRRPP_PI4HA RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 4A  4-38 SUBUNIT VIRUS (STRAIN TOSHIBA) PVV_PI4HA VPROTEIN HUMAN PARAINFLUENZA 4A  4-38 VIRUS (STRAIN TOSHIBA) PRRPP_HRSVRNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUSPNCAP_HRSVA NUCLEOCAPSID PROTEIN HUMAN RESPIRATORY  4-31 SYNCYTIAL VIRUS(STRAIN A2) PRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 103-192210-237 667-694 788-815 1007-1034 1138-1165 1453-1480 1776-18032062-2089 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2) PRRPP_HRSVA RNA POLYMERASEALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS (STRAIN A2)PVGLF_HRSVA FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202 213-243488-518 PRECURSOR SYNCYTIAL VIRUS (STRAIN A2) PVMA2_HRSVA MATRIXGLYCOPROTEIN M2 HUMAN RESPIRATORY 124-151 SYNCYTIAL VIRUS (STRAIN A2)PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY 219-246 SYNCYTIAL VIRUS(STRAIN A2) PVGLG_HRSV4 MAJOR SURFACE HUMAN RESPIRATORY  66-107GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAIN RSB5857) PVGLG_HRSV5 MAJORSURFACE HUMAN RESPIRATORY 243-273 GLYCOPROTEIN G SYNCYTIAL VIRUS (STRAINRSB6190) PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-202213-243 442-471 488-518 PRECURSOR VIRUS (STRAIN RSS-2) PRRPP_HRSVL RNAPOLYMERASE ALPHA HUMAN RESPIRATORY  99-141 SUBUNIT SYNCYTIAL VIRUS(SUBGROUP A/STRAIN LONG) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMANRESPIRATORY 38-65 154-202 216-243 444-471 488-515 PRECURSOR SYNYTIALVIRUS (SUBGROUP A/STRAIN LONG) PNCAP_HRSV1 NUCLEOCAPSID PROTEIN HUMANRESPIRATORY  4-31  74-108 112-141 SYNCYTIAL VIRUS (SUBGROUP B/STRAIN18537) PRRPP_HRSV1 RNA POLYMERASE ALPHA HUMAN RESPIRATORY  99-141SUBUNIT SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLF_HRSV1 FUSIONGLYCOPROTEIN HUMAN RESPIRATORY 38-65 154-203 442-471 488-515 PRECURSORSYNCYTIAL VIRUS (SUBGROUP B/STRAIN 18537) PVGLG_HRSV1 MAJOR SURFACEHUMAN RESPIRATORY 63-93 GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUPB/STRAIN 18537) PVGLG_HRSV8 MAJOR SURFACE HUMAN RESPIRATORY 66-93GLYCOPROTEIN G SYNCYTIAL VIRUS (SUBGROUP B/STRAIN 8/60) PENV_HTL1C ENVPOLYPROTEIN HUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (CARIBBEANISOLATE) PPOL_HTL1C POL POLYPROTEIN HUMAN T-CELL LEUKEIMA 674-712 VIRUSTYPE I (CARIBBEAN ISOLATE) PENV_HTLIM ENV POLYPROTEIN HUMAN T-CELLLEUKEMIA 342-376 VIRUS TYPE 1 (ISOLATE MT-2) PENV_HTL1A ENV POLYPROTEINHUMAN T-CELL LEUKEMIA 342-376 VIRUS TYPE 1 (STRAIN ATK) PPOL_HTL1A POLPOLYPROTEIN HUMAN T-CELL LEUKEMIA 674-712 VIRUS TYPE 1 (STRAIN ATK)PENV_HTLV2 ENV POLYPROTEIN HUMAN T-CELL LEUKEMIA 336-370 VIRUS TYPE IIPDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPES VIRUS 1 328-366 710-737PKR74_HSVI1 GENE 74 PROTEIN KINASE ICTALURID HERPES VIRUS 1 491-518PVG07_HSVI1 HYPOTH GENE 7 MEMB PRO ICTALURID HERPES VIRUS 1 71-98PVG17_HSVI1 HYPOTHETICAL GENE 17 ICTALURID HERPES VIRUS 1 177-204PROTEIN PVG18_HSVI1 HYPOTHETICAL GENE 18 ICTALURID HERPES VIRUS 1174-208 PROTEIN PVG22_HSVI1 HYPOTHETICAL GENE 22 ICTALURID HERPES VIRUS1 373-400 581-622 668-705 766-824 PROTEIN PVG24_HSVI1 HYPOTHETICAL GENE24 ICTALURID HERPES VIRUS 1 31-58 PROTEIN PVG28_HSVI1 HYPOTHETICAL GENE28 ICTALURID HERPES VIRUS 1 253-290 497-528 PROTEIN PVG34_HSVI1HYPOTHETICAL GENE 34 ICTALURID HERPES VIRUS 1  95-122 PROTEINPVG37_HSVI1 HYPOTHETICAL GENE 37 ICTALURID HERPES VIRUS 1 442-469PROTEIN PVG39_HSVI1 HYPOTHETICAL GENE 39 ICTALURID HERPES VIRUS 1651-678 1088-1115 PROTEIN PVG46_HSVI1 PROBABLE MAJOR ICTALURID HERPESVIRUS 1 142-169 346-373 897-924  973-1007 GLYCOPROTEIN PVG51_HSVI1HYPOTH GENE 51 ICTALURID HERPES VIRUS 1 34-61  87-114 MEMBRANE PROTEINPVG56_HSVI1 HYPOTHETICAL GENE 56 ICTALURID HERPES VIRUS 1 582-609PROTEIN PVG63_HSVI1 HYPOTHETICAL GENE 63 ICTALURID HERPES VIRUS 1550-584 PROTEIN PVG64_HSVI1 HYPOTHETICAL GENE 64 ICTALURID HERPES VIRUS1 477-504 PROTEIN PVG65_HSVI1 HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 1213-1254 PROTEIN PVG66_HSVI1 HYPOTHETICAL GENE 66 ICTALURIDHERPES VIRUS 1 362-406 PROTEIN PVG67_HSVI1 HYPOTHETICAL GENE 67ICTALURID HERPES VIRUS 1 1342-1369 PROTEIN PVG68_HSVI1 HYPOTHETICAL GENE68 ICTALURID HERPES VIRUS 1 261-288 PROTEIN PVG72_HSVI1 HYPOTHETICALGENE 72 ICTALURID HERPES VIRUS 1 447-481 PROTEIN PVG75_HSVI1HYPOTHETICAL GENE 75 ICTALURID HERPES VIRUS 1 388-422 PROTEINPVG76_HSVI1 HYPOTHETICAL GENE 76 ICTALURID HERPES VIRUS 1 200-227PROTEIN PVTER_HSVI1 PROBABLE DNA ICTALURID HERPES VIRUS 1 710-737PACKAGING PROTEIN PHEMA_IAHSW HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 29-56 194-221 388-457 EQUINE/SWITZERLAND/137/72 PHEMA_IAAICHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 AICHI/2/68)PVNS1_IAALA NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198NS1 ALASKA/6/7) PVNUC_IAANA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 ANA ACUTA/PRIMORJE/695/76) PRRP2_IAANN RNA-DIRECTED RNA POLINFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 ANN ARBOR/6/60) PVNS1_IAANNNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 ANNARBOR/6/60) PVNUC_IAANN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 ANN ARBOR/6/60) PHEMA_IABAN HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 24-51 371-437 BANGKOK/1/79) PNRAM_IABDA NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 47-81 BLACK DUCK/AUSTRALIA/ 702/78)PVNUC_IABRA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405BRAZIL/11/78) PHEMA_IABUD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 381-451 BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IABUD RNA-DIRECTEDRNA POL INFLUENZA A VIRUS (STRAIN A/ 537-567 SUB P3BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IABUD NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 BUDGERIGAR/HOKKAIDO/1/77) PVNUC_IACAL NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 CALIFORNIA/10/78) PNRAM_IACAONEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 33-64 CAMEL/MONGOLIA/82PHEMA_IACAO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN A/  9-36CAMEL/MONGOLIA/82) PHEMA_IACKA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 381-451 CHICKEN/ALABAMA/1/75) PHEMA_IACKG HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 494-528CHICKEN/GERMANY/N/49) PVNS1_IACKG NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN A/ 171-198 NS1 CHICKEN/GERMANY/N/49) PVNUC_IACKGNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 CHICKEN/GERMANY/N/49)PVNS1_IACKJ NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 168-195NS1 CHICKEN/JAPAN/24) PHEMA_IACKP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1/83) PVNUC_IACKPNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQ HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN A/ 396-426 CHICKEN/PENNSYLVANIA/1370/ 83) PHEMA_IACKVHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146 384-443CHICKEN/VICTORIA/1/85) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/ 16-43 50-91 CHILE/1/83) PRRP3_IACHI RNA-DIRECTED RNA POLINFLUENZA A VIRUS (STRAIN A/ 331-358 SUB P3 CHILE/1/83) PVNS1_IACHINONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1CHILE/1/83) PHEMA_IADA1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 381-451 DUCK/ALBERTA/28/76) PNRAM_IADA1 NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 51-81 DUCK/ALBERTA/28/76) PHEMA_IADA4HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 418-478DUCK/ALBERTA/35/76) PHEMA_IADA2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 423-453 499-543 DUCK/ALBERTA/60/76) PVNS1_IADA2NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1DUCK/ALBERTA/60/76) PHEMA_IADA3 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 387-453 DUCK/ALBERTA/78/76) PVNUC_IADAU NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/AUSTRALIA/749/80) PVNUC_IADBENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/BEIJING/1/78)PHEMA_IADCZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451DUCK/CZECHOSLOVAKIA/56) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/ENGLAND/1/) PHEMA_IADE1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 402-453506-533 DUCK/ENGLAND/1/56) PVNUC_IADE2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 DUCK/ENGLAND/1/62) PNRAM_IADGE NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 21-48 DUCK/GERMANY/49) PHEMA_IADH7HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437DUCK/HOKKAIDO/10/85) PHEMA_IADH5 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/21/82) PHEMA_IADH3 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/33/80)PHEMA_IADH1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437DUCK/HOKKAIDO/5/77) PHEMA_IADH4 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/7/82) PHEMA_IADH2 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/8/80)PRRP2_IADH2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146SUB P2 DUCK/HOKKAIDO/8/80) PHEMA_IADH6 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN A/ 371-437 DUCK/HOKKAIDO/9/85) PVNUC_IADHK NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/HONG KONG/7/75) PHEMA_IADIRHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 413-445DUCK/IRELAND/113/83) PHEMA_IADMA HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 31-58 DUCK/MANITOBA/1/53) PVNUC_IADMA NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MANITOBA/1/53) PHEMA_IADM2HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-56DUCK/MEMPHIS/546/76) PHEMA_IADM2 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 387-453 DUCK/MEMPHIS/928/74) PVNUC_IADM2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/MEMPHIS/928/74) PHEMA_IADNYHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 DUCK/NEWYORK/12/78) PHEMA_IADNZ HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 381-451 DUCK/NEW ZEALAND/31/76) PVNUC_IADNZ NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/NEW ZEALAND/31/76) PHEMA_IADU1HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55DUCK/UKRAINE/1/60) PHEMA_IADU3 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 387-453 DUCK/UKRAINE/1/63) PVNUC_IADU2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 DUCK/UKRAINE/2/60) PVNUC_IAEN5NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 ENGLAND/19/55)PHEMA_IAEN7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67387-453 ENGLAND/321/77) PHEMA_IAEN6 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 24-51 ENGLAND/878/69) PHEMA_IAHAL HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ALGIERS/72)PHEMA_IAHCD HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56194-221 388-457 EQUINE/C.DETROIT/1/64) PHEMA_IAHC6 HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/CAMBRIDGE/1/73)PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 197-224 386-413EQUINE/COR/16/74) PHEMA_IAHDE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 29-56 194-221 388-457 EQUINE/DETROIT/1/64) PHEMA_IAHFOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452EQUINE/FONTAINEBLEAU/76) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 EQUINE/JILLIN/1/89) PNRAM_IAHK1 NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/  5-44 46-76 364-400 EQUINE/KENTUCKY/1/81)PHEMA_IAHK7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452EQUINE/KENTUCKY/1/87) PHEMA_IAHK6 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 386-452 EQUINE/KENTUCKY/2/86) PHEMA_IAHLE HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 194-221 388-457EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/LONDON/1416/73)PRRP2_IAHLO RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146SUB P2 EQUINE/LONDON/1416/73) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 378-405 LONDON/1416/73) PHEMA_IAHMI HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/MIAMI/1/63)PVNUC_IAHMI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405EQUINE/MIAMI/1/63) PHEMA_IAHNN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 29-56 194-221 388-457 EQUINE/NEW MARKET/1/77) PHEMA_IAHNMHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/NEWMARKET/76) PHEMA_IAHPR HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAINA/ 29-56 194-221 388-457 EQUINE/PRAGUE/1/56) PRRP3_IAHPR RNA-DIRECTEDRNA POL INFLUENZA A VIRUS (STRAIN A/ 331-361 480-507 SUB P3EQUINE/PRAGUE/1/56) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAINA/ 378-405 EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/ROMANIA/80) PHEMA_IAHSAHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 29-56 194-221 388-457 EQUINE/SAO PAULO/1/76)PHEMA_IAHTE HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452EQUINE/TENNESSEE/5/86) PRRP2_IAHTE RNA-DIRECTED RNA POL INFLUENZA AVIRUS (STRAIN A/ 119-146 SUB P2 EQUINE/TENNESSEE/5/86) PVNUC_IAHTENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405EQUINE/TENNESSEE/5/86) PHEMA_IAHTO HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 386-455 EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 386-452 EQUINE/URUGUAY/1/63)PVNS1_IAFOM NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198NS1 FORT MONMOUTH/1/47) PVNUC_IAFOM NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 FORT MONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 FORT WARREN/1/50) PVNUC_IAFOWNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FORT WARREN/1/50)PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWLPLAGUE VIRUS/DOBSON/ ‘DUTCH’/27) PHEMA_IAFPR HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 177-221 384-442 FOWL PLAGUE VIRUS/ROSTOCK/34) PRRP2_IAFPR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAINA/ 119-146 SUB P2 FOWL PLAGUE VIRUS/ ROSTOCK/34) PVNUC_IAFPRNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 FOWL PLAGUE VIRUS/ROSTOCK/34) PNRAM_IAFPW NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 10-4852-80 197-224 FOWL PLAGUE VIRUS/ WEYBRIDGE) PHEMA_IAGRE HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 GREY TEAL/AUSTRALIA/2/79)PVNUC_IAURE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GREYTEAL/AUSTRALIA/2/79) PHEMA_IAGUA HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 504-531 GULL/ASTRAKHAN/227/84) PVNUC_IAGUANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 389-405GULL/ASTRAKHAN/227/84) PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 GULL/MARYLAND/1815/79) PVNUC_IAGU3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/1824/78) PVNUC_IAGU1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/5/77)PHEMA_IAGU2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 505-532GULL/MARYLAND/704/77) PRRP2_IAGU2 RNA-DIRECTED RNA POL INFLUENZA A VIRUS(STRAIN A/ 119-146 SUB P2 GULL/MARYLAND/704/77) PVNUC_IAGU2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 GULL/MARYLAND/704/77)PVNUC_IAGUM NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405GULL/MASSACHUSETTS/26/80) PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 GULL/MINNESOTA/945/80) PHEMA_IAHAR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 HARBIN/1/88) PVNUC_IAHICNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HICKOX/40)PVNUC_IAHO1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 HONGKONG/1/68) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 HONG KONG/5/83) PHEMA_IAJAP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 196-223 JAPAN/305/57) PHEMA_IAKIE HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56 425-478 KIEV/59/79)PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 50-81 KIEV/59/79)PVNUC_IAKIE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405KIEV/59/79) PRRP1_IAKOR RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAINA/ 575-602 SUB P1 KOREA/426/68) PRRP2_IAKOR RNA-DIRECTED RNA POLINFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 KOREA/426/68) PRRP2_IALE2RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2LENINGRAD/134/17/57) PRRP2_IALE1 RNA-DIRECTED RNA POL INFLUENZA A VIRUS(STRAIN A/ 119-146 SUB P2 LENINGRAD/134/57) PVNS1_IALE1 NONSTRUCTURALPROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 LENINGRAD/134/57)PHEMA_IALEN HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56425-478 LENINGRAD/54/1) PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS(STRAIN A/ 50-81 LENINGRAD/54/1) PVNUC_IALEN NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 378-405 LENINGRAD/54/1) PVNS1_IAMA6 NONSTRUCTURALPROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 MALLARD/ALBERTA/88/76)PHEMA_IAMAA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 380-450MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 MALLARD/ASTRAKHAN/244/82) PHEMA_IAMAB HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 385-455 MALLARD/ASTRAKHAN/263/82)PRRP2_IAMAN RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146SUB P2 MALLARD/NEW YORK/6750/78) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 378-405 MALLARD/NEW YORK/6750/78) PHEMA_IAMAOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 387-453 MALLARD/NEWYORK/6874/78) PHEMA_IAME1 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 40-67 387-453 MEMPHIS/1/71) PNRMA_IAME1 NEURAMINIDASEINFLUENZA A VIRUS (STRAIN A/ 16-43 50-81 MEMPHIS/1/71H-A/BELLAMY/ 42N)PHEMA_IAME2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67387-453 MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 24-51 371-437 MEMPHIS/6/86) PHEMA_IAMIN HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 31-58 382-441 MINK/SWEDEN/84)PVNUC_IAMIN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405MINK/SWEDEN/84) PVNUC_IANEJ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 NEW JERSEY/8/76) PHEMA_IANT6 HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 387-453 NT/60/68) PRRP2_IANT6 RNA-DIRECTED RNA POLINFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2 NT/60/68) PVNUC_IANT6NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 NT/60/68) PVNUC_IAOHINUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 OHIO/4/83)PNRAM_IAPAR NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 50-81PARROT/ULSTER/73) PVNUC_IAPAR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 PARROT/ULSTER/73) PHEMA_IAPIL HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN A/ 505-534 PILOT WHALE/MAINE/328/84 PRRP2_IAP10RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2PINTAIL/ALBERTA/119/79) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS (STRAIN A/ 171-198 NS1 PINTAIL/ALBERTA/121/79) PVNS1_IAPI3NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1PINTAIL/ALBERTA/358/79) PHEMA_IAPUE HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 29-56 425-478 PUERTO RICO/8/34) PNRAM_IAPUENEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43 PUERTO RICO/8/34)PRRP2_IAPUE RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146SUB P2 PUERTO RICO/8/34) PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 PUERTO RICO/8/34) PHEMA_IAQU7 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 24-51 QU/7/70) PHEMA_IARUD HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451 RUDDY TURNSTONE/NEWJERSEY/47/85) PRRP2_IARUD RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAINA/ 119-146 SUB P2 RUDDY TURNSTONE/NEW JERSEY/47/85) PVNUC_IARUDNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 RUDDY TURNSTONE/NEWJERSEY/47/85) PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/49-88 RUDDY TURNSTONE/NEW JERSEY/60/85) PVNUC_IASE0 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SEAL/MASSACHUSETTS/1/80)PHEMA_IASE2 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 381-451SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN A/ 28-56 160-187 506-547 SHEARWATER/AUSTRALIA/72)PVNUC_IASH2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405SHEARWATER/AUSTRALIA/72) PRRP2_IASIN RNA-DIRECTED RNA POL INFLUENZA AVIRUS (STRAIN A/ 119-146 SUB P2 SINGAPORE/1/57) PVNUC_IASINNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378/405 SINGAPORE/1/57)PHEMA_IASTA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 119-146384-443 STARLING/VICTORIA/5156/85) PVNUC_IAZ29 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN A/ 378-405 SWINE/29/37) PVNUC_IAZ41 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/41/49) PVNUC_IAZCANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/CAMBRIDGE/1/35)PHEMA_IAZCO HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 40-67387-453 SWINE/COLORADO/1/77) PVNUC_IAZDA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 SWINE/DANDONG/9/83) PVNUC_IAZGE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/GERMANY/2/81) PHEMA_IAZH3HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONGKONG/126/82) PRRP2_IAZH3 RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAINA/ 119-146 SUB P2 SWINE/HONG KONG/126/82) PVNUC_IAZH3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONG KONG/126/82) PVNUC_IAZH4NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/HONGKONG/127/82) PVNUC_IAZH1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 SWINE/HONG KONG/6/76) PHEMA_IAZH2 HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 371-437 SWINE/HONG KONG/81/78) PRRP2_IAZH2RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2SWINE/HONG KONG/81/78) PHEMA_IAZIN HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 418-478 506-547 SWINE/INDIANA/1726/88) PRRP2_IAZI1RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2SWINE/IOWA/15/30) PVNUC_IAZI1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 SWINE/IOWA/15/30) PVNUC_IAZI2 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 SWINE/IOWA/1976/31) PVNUC_IAZI3 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/IOWA/46) PVNUC_IAZJ3NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/ITALY/141/81)PVNUC_IAZJ2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405SWINE/ITALY/2/79) PVNUC_IAZJ1 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 SWINE/ITALY/437/76) PVNUC_IAZJ4 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 SWINE/ITALY/839/89) PVNUC_IAZJA NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/JAMESBURG/42) PVNUC_IAZMANUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/MAY/54)PVNUC_IAZNE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405SWINE/NETHERLANDS/12/85) PHEMA_IAZNJ HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 418-478 506-547 SWINE/NEW JERSEY/11/76) PVNUC_IAZOHNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/OHIO/23/35)PVNUC_IAZON NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405SWINE/ONTARIO/2/81) PRRP3_IAZTE RNA-DIRECTED RNA POL INFLUENZA A VIRUS(STRAIN A/ 487-514 SUB P3 SWINE/TENNESSEE/24/77) PVNUC_IAZTENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WINE/TENNESSEE/24/77)PRRP2_IAZTF RNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146SUB P2 SWINE/TENNESSEE/26/77) PHEMA_IAZUK HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 387-453 SWINE/UKKEL/1/84) PVNUC_IAZW1NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 SWINE/WISCONSIN/1/57)PVNUC_IAZW2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405SWINE/WISCONSIN/1/61) PHEMA_IATAI HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 25-56 TAIWAN/1/86) PVNUC_IATEI NUCLEOPROTEIN INFLUENZAA VIRUS (STRAIN A/ 378-405 TEAL/ICELAND/29/80) PHEMA_IATRA HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 21-55 TERN/AUSTRALIA/G70C/75)PNRAM_IATRA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-82TERN/AUSTRALIA/G70C/75) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 TERN/SOUTH AFRICA/61) PVNS1_IATRT NONSTRUCTURALPROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TERN/TURKMENIA/18/72)PVNUC_IATRT NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405TERN/TURKMENIA/18/72) PVNUC_IATX7 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 TEXAS/1/77) PVNS1_IATKB NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 TURKEY/BETHLEHEM-GLILIT/1492-B/82) PVNS1_IATKC NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS (STRAINA/ 171-198 NS1 TURKEY/CANADA/63) PHEMA_IATKI HEMAGGLUTININ PRECURSORINFLUENZA A VIRUS (STRAIN A/ 415-445 TURKEY/IRELAND/1378/83) PVNUC_IATKNNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405TURKEY/MINNESOTA/1661/81) PHEMA_IATKM HEMAGGLUTININ PRECURSOR INFLUENZAA VIRUS (STRAIN A/ 381-451 TURKEY/MINNESOTA/833/80) PRRP2_IATKMRNA-DIRECTED RNA POL INFLUENZA A VIRUS (STRAIN A/ 119-146 SUB P2TURKEY/MINNESOTA/833/80) PHEMA_IATKP HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 424-454 493-539 TURKEY/ONTARIO/6118/68) PHEMA_IATKOHEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 507-534TURKEY/ONTARIO/7732/66) PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 TURKEY/ONTARIO/7732/66) PHEMA_IATKR HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 32-62 194-221 381-422TURKEY/OREGON/71) PVNS2_IATKR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS(STRAIN A/ 87-114 NS2 TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 419-449 500-536TURKEY/WISCONSIN/1/66) PHEMA_IAUDO HEMAGGLUTININ PRECURSOR INFLUENZA AVIRUS (STRAIN A/ 40-67 387-453 UDORN/307/72) PVNS1_IAUDO NONSTRUCTURALPROTEIN INFLUENZA A VIRUS (STRAIN A/ 171-198 NS1 UDORN/307/72)PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405UDORN/307/72) PHEMA_IAUSS HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS(STRAIN A/ 29-56 425-478 USSR/90/77) PNRAM_IAUSS NEURAMINIDASE INFLUENZAA VIRUS (STRAIN A/ 50-81 A/USSR/90/77) PVNS1_IAUSS NONSTRUCTURAL PROTEININFLUENZA A VIRUS (STRAIN A/ 171-98 NS1 USSR/90/77) PVNUC_IAUSSNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 USSR/90/77)PHEMA_IAVI7 HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 41-68388-454 VICTORIA/3/75) PRRP2_IAVI7 RNA-DIRECTED RNA POL INFLUENZA AVIRUS (STRAIN A/ 119-146 327-354 SUB P2 VICTORIA/3/75) PVNUC_IAVI6NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 VICTORIA/5/68)PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 49-88WHALE/MAINE/1/84) PVNUC_IAWHN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/378-405 WHALE/MAINE/328/84) PVNUC_IAWHP NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 378-405 WHALE/PACIFIC OCEAN/19/76) PHEMA_IAWIL HEMAGGLUTININPRECURSOR INFLUENZA A VIRUS (STRAIN A/ 424-477 WILSON-SMITH/33)PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN A/ 16-43WILSON-SMITH/33) PRRP2_IAWIL RNA-DIRECTED RNA POL INFLUENZA A VIRUS(STRAIN A/ 119-146 SUB P2 WILSON-SMITH/33) PVNUC_IAWIL NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 378-405 WILSON-SMITH/33) PVNUC_IAWISNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 378-405 WISCONSIN/3523/88)PHEMA_IAXIA HEMAGGLUTININ PRECURSOR INFLUENZA A VIRUS (STRAIN A/ 29-56XIANFENG/3/89) PPRP2_INBAC RNA-DIRECTED RNA POL INFLUENZA B VIRUS(STRAIN B/ 157-194 SUB P2 ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBACRNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33 472-509 SUB P3ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2_INBAD RNA-DIRECTED RNA POLINFLUENZA B VIRUS (STRAIN B/ 164-194 SUB P2 ANN ARBOR/1/66 [WILD-TYPE]PRRP3_INBAD RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 2-33472-509 SUB P3 ANN ARBOR/1/66 [WILD-TYPE] PHEMA_INBBE HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 BEIJING/1/87)PHEMA_INBBO HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 390-421429-473 BONN/43) PHEMA_INBEN HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS(STRAIN B/ 398-429 437-481 ENGLAND/222/82) PHEMA_INBHK HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN B/ 391-418 429-473 HONG KONG/8/73)PHEMA_INBLE HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/ 399-430438-482 LEE/40) PNRAM_INBLE NEURAMINIDASE INFLUENZA B VIRUS (STRAIN B/4-35 LEE/40) PVNS2_INBLE NONSTRUCTURAL PROTEIN INFLUENZA B VIRUS (STRAINB/ 51-78 NS2 LEE/40) PHEMA_INBMD HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN B/ 389-420 428-472 MARYLAND/59) PHEMA_INBME HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN B/ 393-424 432-476 MEMPHIS/6/86)PHGEMA_INBOR HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/398-429 437-481 OREGON/5/80) PVNS1_INBPA NONSTRUCTURAL PROTEIN INFLUENZAB VIRUS (STRAIN B/ 171-198 NS1 PA/79) PHEMA_INBSI HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN B/ 398-429 437-481 SINGAPORE/222/79)PRRP2_INBSI RNA-DIRECTED RNA POL INFLUENZA B VIRUS (STRAIN B/ 157-194SUB P2 SINGAPORE/222/79) PHEMA_INBUS HEMAGGLUTININ PRECURSOR INFLUENZA BVIRUS (STRAIN B/ 391-422 430-474 USSR/100/83) PHEMA_INBVK HEMAGGLUTININPRECURSOR INFLUENZA B VIRUS (STRAIN B/ 400-431 439-483 VICTORIA/2/87)PHEMA_INBVI HEMAGGLUTININ PRECURSOR INFLUENZA B VIRUS (STRAIN B/393-4224 432-476 VICTORIA/3/85) PVNS2_INBYA NONSTRUCTURAL PROTEININFLUENZA B VIRUS (STRAIN B/ 51-78 NS2 YAMAGATA/1/73) PRRP3_INCBERNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3BERLIN/1/85) PHEMA_INCCA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS(STRAIN C/ 495-571 CALIFORNIA/78) PVNUC_INCAA NUCLEOPROTEIN INFLUENZA CVIRUS (STRAIN C/  99-126 416-443 451-478 CALIFORNIA/78) PHEMA_INCENHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS(STRAIN C/ 483-559 GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 HYOGO/1/83) PRRP3_INCJJRNA-DIRECTED RNA POL INFLUENZA C VIRUS (STRAIN C/ 509-536 SUB P3 JJ/50)PVMAT_INCJJ MATRIX (M) PROTEIN INFLUENZA C VIRUS (STRAIN C/ 151-185JJ/50) PVNS2_INCJJ NONSTRUCTURAL PROTEIN INFLUENZA C VIRUS (STRAIN C/71-98 NS2 JJ/50) PHEMA_INCJH HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS(STRAIN C/ 496-572 JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558 KYOTO/41/82) PHEMA_INCMIHEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 482-558MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS(STRAIN C/ 482-558 NARA/82) PHEMA_INCP1 HEMAGGLUTININ PRECURSORINFLUENZA C VIRUS (STRAIN C/ 483-559 PIG/BEIJING/10/81) PHEMA_INCP2HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININ PRECURSOR INFLUENZA CVIRUS (STRAIN C/ 483-559 PIG/BEIJING/439/82) PHEMA_INCTA HEMAGGLUTININPRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559 TAYLOR/1233/47)PHEMA_INCYA HEMAGGLUTININ PRECURSOR INFLUENZA C VIRUS (STRAIN C/ 483-559YAMAGATA/10/81) PENV_MLVKI ENV POLYPROTEIN KIRSTEN MURINE LEUKEMIA 40-81VIRUS PVGLB_HSVMD GLYCOPROTEIN B PRECURSOR MAREK'S DISEASE HERPES 93-120 352-379 VIRUS (STRAIN RB-1B) PENV_MCFF ENV POLYPROTEIN MINK CELLFOCUS-FORMING 473-512 MURINE LEUKEMIA VIRUS PENV_MCFF3 ENV POLYPROTEINMINK CELL FOCUS-FORMING 488-515 MURINE LEUKEMIA VIRUS (ISOLATE CI-3)PENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 502-543 VIRUSPDNBI_MCMVS MAJOR DNA-BINDING PROTEIN MURINE CYTOMEGALOVIRUS 584-618(STRAIN SMITH) PIC18_MCMVS PROB PROC & TRANSPORT PRO MURINECYTOMEGALOVIRUS 661-691 (STRAIN SMITH) PVGLB_MCMVS GLYCOPROTEIN BPRECURSOR MURINE CYTOMEGALOVIRUS 381-408 441-475 (STRAIN SMITH)VIE1_MCMVS IMMEDIATE-EARLY PROTEIN 1 MURINE CYTOMEGALOVIRUS 261-288(STRAIN SMITH) PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE 267-294 327-361PAPILLOMA VIRUS TYPE 1 PVE5_PCPV1 PROBABLE E5 PROTEIN PYGMY CHIMPANZEE35-62 PAPILLOMA VIRUS TYPE 1 PENV_MLVRD ENV POLYPROTEIN RADIATION MURINELEUKEMIA 497-538 VIRUS PPOL_MLVRD POL POLYPROTEIN RADIATION MURINELEUKEMIA 716-743 805-832 VIRUS PENV_MLVRK ENV POLYPROTEIN RADIATIONMURINE LEUKEMIA 497-538 VIRUS (STRAIN KAPLAN) PPOL_MLVRK POL POLYPROTEINRADIATION MURINE LEUKEMIA 101-128 190-217 VIRUS (STRAIN KAPLAN)PDNBI_SCMBC MAJOR DNA-BINDING PROTEIN CIMIAN CYTOMEGALOVIRUS 435-462532-559 (STRAIN COLBURN) PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITISA VIRUS 207-241 1025-1052 1115-1192 (STRAIN AGM-27) PPOLG_HPAVT GENOMEPOLYPROTEIN SIMIAN HEPATITIS A VIRUS 203-237 (STRAIN CY-145) PENV_SIVA1ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 269-310 561-588 592-619 652-679697-724 VIRUS (AGM155 ISOLATE) PPOL_SIVA1 POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 431-458 547-574 637-671 VIRUS (AGM155 ISOLATE)PPOL_SIVA2 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 45-72 VIRUS (AGM266ISOLATE) PENV_SIVAG ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 270-301566-593 597-624 658-685 703-730 VIRUS (AGM3 ISOLATE) PPOL_SIVAG POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 436-463 482-516 642-669 VIRUS (AGM3ISOLATE) PPOL_SIVA3 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 71-98 VIRUS(AGM385 ISOLATE) PENV_SIVS4 ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY281-308 553-612 642-669 691-718 VIRUS (F236/SMH4 ISOLATE) PGAG_SIVS4 GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (F236/SMH4 ISOLATE)PPOL_SIVS4 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 496-523 VIRUS(F236/SMH4 ISOLATE) PENV_SIVAI ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY257-291 336-372 548-603 634-708 VIRUS (ISOLATE AGM/CLONE GRI-1)PGAG_SIVAI GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 473-507 VIRUS(ISOLATE AGM/CLONE GRI-1) PNEF_SIVAI NEGATIVE FACTOR SIMIANIMMUNODEFICIENCY  96-137 VIRUS (ISOLATE AGM/CLONE GRI-1) PPOL_SIVAI POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 478-515 VIRUS (ISOLATE AGM/CLONEGRI-1) VIF_SIVAI VIRION INFECTIVITY FACTOR SIMIAN IMMUNODEFICIENCY  2-36VIRUS (ISOLATE AGM/CLONE GRI-1) PENV_SIVGB ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY  8-35 158-185 589-650 784-816 VIRUS (ISOLATE GB1)PPOL_SIVGB POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 222-254 636-670 VIRUS(ISOLATE GB1) PENV_SIVMK ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY 553-608VIRUS (K6W ISOLATE) PGAG_SIVMK GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (K6W ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 533-560 VIRUS (K6W ISOLATE) PENV_SIVML ENV POLYPROTEINSIMIAN IMMUNODEFICIENCY 549-608 VIRUS (K78 ISOLATE) PENV_SIVM1 ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 120-150 550-609 671-715 VIRUS(MM142-83 ISOLATE) PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY553-560 VIRUS (MM142-83 ISOLATE) PENV_SIVM2 ENV POLYPROTEIN SIMIANIMMUNODEFICIENCY 156-215 277-289 VIRUS (MM251 ISOLATE) PENV_SIVSP ENVPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 286-313 554-595 646-722 VIRUS(PBJ/BC13 ISOLATE) PGAG_SIVSP GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 88-115 VIRUS (PBJ/BC13 ISOLATE) PPOL_SIVSP POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 499-526 VIRUS (PBJ/BC13 ISOLATE) PGAG_SIVMS GAGPOLYPROTEIN SIMIAN IMMUNODEFICIENCY  88-115 VIRUS (STM ISOLATE)PENV_SIVAT ENV POLYPROTEIN SIMIAN IMMUNODEFICIENCY  3-30 268-298 590-617651-678 VIRUS (TYO-1 ISOLATE) PPOL_SIVAT POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 657-691 VIRUS (TYO-1 ISOLATE) PREV_SIVAT REV PROTEINSIMIAN IMMUNODEFICIENCY 41-68 VIRUS (TYO-1 ISOLATE) PENV_MPMV ENVPOLYPROTEIN SIMIAN MASON-PFIZER VIRUS 422-470 PPOL_MPMV POL POLYPROTEINSIMIAN MASON-PFIZER VIRUS 574-612 670-697 PGAG_MPMV GAG POLYPROTEINSIMIAN MASON-PFIZER VIRUS 222-260 (MPMV) PEXON_VZVD ALKALINE EXONUCLEASEVARICELLA-ZOSTER VIRUS 109-139 (STRAIN DUMAS) PHELI_VZVD PROBABLEHELICASE VARICELLA-ZOSTER VIRUS 490-517 701-728 (STRAIN DUMAS)PRIR1_VZVD RIBONUC-DIPHOSPH VARICELLA-ZOSTER VIRUS 119-146 REDUCT LARGECHA (STRAIN DUMAS) PTEGU_VZVD LARGE TEGUMENT PROTEIN VARICELLA-ZOSTERVIRUS 1121-1158 1579-1609 (STRAIN DUMAS) PUL14_VZVD HYPOTHETICAL GENE 46VARICELLA-ZOSTER VIRUS  64-101 PROTEIN (STRAIN DUMAS) PUL21_VZVD GENE 38PROTEIN VARICELLA-ZOSTER VIRUS 380-407 (STRAIN DUMAS) PUL34_VZVD VIRIONGENE 24 PROTEIN VARICELLA-ZOSTER VIRUS 112-139 (STRAIN DUMAS) PUL37_VZVDGENE 21 PROTEIN VARICELLA-ZOSTER VIRUS 107-134 485-512 719-746  976-1003(STRAIN DUMAS) PUL41_VZVD HOST SHUTOFF VIRION VARICELLA-ZOSTER VIRUS330-364 PROTEIN (STRAIN DUMAS) PUL43_VZVD GENE 15 MEMBRANEVARICELLA-ZOSTER VIRUS 129-156 312-349 PROTEIN (STRAIN DUMAS) PUL52_VZVDPROB DNA REP GENE 6 VARICELLA-ZOSTER VIRUS 301-337 PROTEIN (STRAINDUMAS) PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322(STRAIN DUMAS) PVP40_VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS174-208 495-522 (STRAIN DUMAS) PVTER_VZVD PROBABLE DNA PACKAGINGVARICELLA-ZOSTER VIRUS 394-421 PROTEIN (STRAIN DUMAS) PVGLC_VZVSGLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 295-322 (STRAIN SCOTT)PDPOL_WHV1 DNA POLYMERASE WOODCHUCK HEPATITIS 285-326 VIRUS 1PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS 290-331 VIRUS 59PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 7PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS 211-241 289-330 VIRUS 8PDPOL_WHV8I DNA POLYMERASE WOODCHUCK HEPATITIS 212-242 290-331 VIRUS 8

TABLE VIII 107 × 178 × 4 SEARCH MOTIF RESULTS SUMMARY FOR ALLPROCARYOTIC PROTEINS PCGENE 107 × 178 × 4 Prokaryotic Sequences FILENAME PROTEIN ORGANISM AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6 AREA 7AREA 8 AREA 9 P120K_RICRI 120 KD SURFACE-EXPOSED RICKETTSIA RICKETTSII 83-110  240-298  355-382  638-672  746-838 1168-1202 PROTEIN P17K_RICTY17 KD ANTIGEN PRECURSOR RICKETTSIA TYPHI  67-94 P190K_RICRI 190 KDANTIGEN PRECURSOR RICKETTSIA RICKETTSII  241-268  460-487  607-634 754-781  829-856  904-931 1220-1254 1544-1571 1723-1750 (CELL SURFACE)2065-2096 2131-2168 P22KD_DESMO 22.6 KD PROTEIN DESULFUROCOCCUS MOBILIS 25-52  59-89  120-147 P40KD_VIBAN 40 KD PROTEIN PRECURSOR VIBRIOANGUILLARUM  153-196 P60IM_ECOLI 60 KD INNER-MEMBRANE ESCHERICHIA COLI 511-538 PROTEIN P60IM_PROMI 60 KD INNER-MEMBRANE PROTEUS MIRABILIS 14-41 PROTEIN P65KD_ZYMMO 65 KD PROTEIN ZYMOMONAS MOBILIS  95-122 444-524 P6PGD_BACSU PROB 6-PHOSPHOGLUCONATE BACILLUS SUBTILIS  24-51 218-246 DEHYDROGENASE P6PGD_ECOLI 6-PHOSPHOGLUCONATE ESCHERICHIA COLI 205-232 DEHYDROGENASE P6PGD_SALTY 6-PHOSPHOGLUCONATE SALMONELLATYPHIMURIUM  205-232 DEHYDROGENASE PAACA_STAAU 6′-AMINOGLYCOSIDESTAPHYLOCOCCUS AUREUS  450-477 N-ACETYLTRANSFERASE PAAT_BACSP ASPARTATEAMINOTRANS- BACILLUS SP  146-173  185-212 FERASE PAAT_ECOLI ASPARTATEAMINOTRANS- ESCHERICHIA COLI  351-378 FERASE PABC_ECOLI ABC PROTEINESCHERICHIA COLI  176-203 PABIC_LACLA ABORTIVE PHAGE RESIS- LACTOCOCCUSLACTIS  85-126  170-204  209-273 TANCE PROTEIN ABIC PACCR_AGRTUTRANSCRIPTIONAL AGROBACTERIUM TUMEFACIENS  127-154 REPRESSOR ACCRPACEA_ECOLI ISOCITRATE LYASE ESCHERICHIA COLI  398-432 PACON_BACSUACONITATE HYDRATASE BACILLUS SUBTILIS  48-75 PACON_ECOLI ACONITATEHYDRATASE ESCHERICHIA COLI  41-68  613-640 PACOR_ALCEU ACETOINCATABOLISM REG ALCALIGENES EUTROPHUS  85-112 PRO PACP_ECOLI ACYL CARRIERPROTEIN ESCHERICHIA COLI   4-31 PACRA_ECOLI ACRIFLAVIN RESISTANCEESCHERICHIA COLI  213-247 PROTEIN A PRECURSOR PACRB_ECOLI ACRIFLAVINRESISTANCE ESCHERICHIA COLI  520-551 PROTEIN B PACRF_ECOLI ACRIFLAVINRESISTANCE ESCHERICHIA COLI  512-550  726-753 PROTEIN F PACT3_STRCOPUTATIVE KETOACYL STREPTOMYCES COELICOLOR  157-184 REDUCTASE PACTA_LISMOACTIN-ASSEMBLY INDUCING LISTERIA MONOCYTOGENES  237-264  576-603 PROTEINPRECURSOR PACVS_NOCLA ACV SYNTHETASE NOCARDIA LACTAMDURANS 3129-3163PADAA_BACSU METPHOSTRIESTER-DNA BACILLUS SUBTILIS  136-170ALKYLTRANSFERASE PADDA_BACSU ATP-DEPENDENT NUCLEASE BACILLUS SUBTILIS 398-425  454-481  522-556 1005-1032 SUBUNIT A PADDB_BACSU ATP-DEPENDENTNUCLEASE BACILLUS SUBTILIS  257-284  870-903  943-977 SUBUNIT BPADHI_CLOAB NADPH-DEPENDENT CLOSTRIDIUM ACETOBUTYLICUM  284-311 BUTANOLDEHYDROGENASE PADHA_CLOAB NADH-DEPENDENT BUTANOL CLOSTRIDIUMACETOBUTYLICUM  298-325 DEHYDROGENASE A PADHB_CLOAB NADH-DEPENDENTBUTANOL CLOSTRIDIUM ACETOBUTYLICUM  298-325 DEHYDROGENASE B PADHE_CLOABALCOHOL DEHYDROGENASE CLOSTRIDIUM ACETOBUTYLICUM  653-680  779-806PADHE_ECOLI ALCOHOL DEHYDROGENASE ESCHERICHIA COLI  271-298 PADIY_ECOLIPUTATIVE REGULATORY ESCHERICHIA COLI  45-72 PROTEIN ADIY PADP1_MYCGE 140KD ADHESION MYCOPLASMA GENITALIUM  90-131  697-724  923-950  990-10171169-1199 1387-1414 PRECURSOR PADP1_MYCPN ADHESION P1 PRECURSORMYCOPLASMA PNEUMONIAE 1557-1584 PADT_RICPR ADP, ATP CARRIER PROTEINRICKETTSIA PROWAZEKII  276-307 PAERA_AERHY AEROLYSIN PRECURSOR AEROMONASHYDROPHILA  278-305 PAGAL_STRMU ALPHA-GALACTOSIDASE STREPTOCOCCUS MUTANS 419-483  597-633 PAGAR_PSEAT BETA-AGARASE PRECURSOR PSEUDOMONASATLANTICA  26-53 PAGR_STAAU ACCESSORY GENE STAPHYLOCOCCUS AUREUS 129-159  165-192 REGULATOR PROTEIN PAIL_YEREN ATTACH INVAS LOCUSYERSINIA ENTEROCOLITICA  19-46 PROTEIN PRECURSOR PAK1H_ECOLIASPARTOKINASE I ESCHERICHIA COLI   3-30  466-493  503-530 PAK2H_ECOLIASPARTOKINASE II ESCHERICHIA COLI  51-78  608-635 PAK2_BACSU ASPARTATEKINASE II ALPHA BACILLUS SUBTILIS  266-312 AND BETA SUBUNITS PAKAB_CORGLASPARTATE KINASE ALPHA CORYNEBACTERIUM GLUTMICUM   5-32 AND BETASUBUNITS PALF_ECOLI FRUCTOSE-BISPHOSPHATE ESCHERICHIA COLI  286-316ALDOLASE PALGB_PSEAE ALGINATE BIOSYN TRANSL PSEUDOMONAS AERUGINOSA 160-194 REG PROTEIN ALBG PALGE_PSEAE ALGINATE PRODUCTION PSEUDOMONASAERUGINOSA  349-376 PROTEIN ALGE PRECURSO PALGP_PSEAE TRANSCRIPTIONALREGULA- PSEUDOMONAS AERUGINOSA  81-115 TORY PROTEIN ALGP PALKB_PSEOLALKANE-1 MONOOXYGENASE PSEDOMONAS OLEOVORANS  115-142 PALKT_PSEOLRUBREDOXIN-NAD(+) PSEUDOMONAS OLEOVORANS  138-172  338-365 REDUCTASEPALR2_ECOLI ALANINE RACEMASE, ESCHERICHIA COLI   9-36 CATABOLICPRECURSOR PALR_BACST ALANINE RACEMASE BACILLUS STEAROTHERMOPHILUS 326-353 PALSR_BACSU ALS OPERON REGULATORY BACILLUS SUBTILIS  119-146PROTEIN PALYS_BACSP AUTOLYSIN PRECURSOR BACILLUS SP  157-187 PALYS_BACSUAUTOLYSIN PRECURSOR BACILLUS SUBTILIS  147-191 PALYS_STAAU AUTOLYSINSTAPHYLOCOCCUS AUREUS  244-271 PAMIA_STRPN AMIA PROTEIN PRECURSORSTREPTOCOCCUS PNEUMONIAE  223-264  297-338  446-473 PAMID_PSECL AMIDASEPSEUDOMONAS CHLORORAPHIS  72-99 PAMIE_STRPN OLIGOPEPTIDE TRANSPORTSTREPTOCOCCUS PNEUMONIAE  187-214 PROTEIN AMIE PAMPA_ECOLIAMINOPEPTIDASE A/I ESCHERICHIA COLI  111-138  199-226 PAMPC_SERMABETA-LACTAMASE SERRATIA MERCESCENS  231-258 PRECURSOR PAMPL_RICPRCYTOSOL AMINOPEPTIDASE RICKETTSIA PROWAZEKII   3-47  72-99 PAMPN_ECOLIAMINOPEPTIDASE N ESCHERICHIA COLI  655-682 PAMPP_ECOLI X-PROAMINOPEPTIDASE ESCHERICHIA COLI  110-137 PAMPT_THEAQ AMINOPEPTIDASE TTHERMUS AQUATICUS  281-308 PAMY1_DICTH ALPHA-AMYLASE 1 DICTYOGLOMUSTHERMOPHILUM  507-534 PAMY2_DICTH ALPHA-AMYLASE 2 DICTYOGLOMUSTHERMOPHILUM  151-178  507-534 PAMY2_SALTY CYTOPLASMIC ALPHA- SALMONELLATYPHIMURIUM  70-104 AMYLASE PAMY3_DICTH ALPHA-AMYLASE 3 DICTYOGLOMUSTHERMOPHILUM  280-307 PAMYB_BACCI BETA-AMYLASE PRECURSOR BACILLUSCIRCULANS  61-88 PAMYB_BACPO BETA-AMYLASE BACILLUS POLYMYXA  60-87 266-293 1143-1184 PAMYB_CLOTU BETA-AMYLASE, THERMO- CLOSTRIDIUM THERMO- 269-296  378-405  459-486 PHILIC PRECURSOR SULFUROGENES PAMYG_CLOSPGLUCOAMYLASE PRECURSOR CLOSTRIDIUM SP  103-148  480-510 PAMYM_BACSTMALTOGENIC ALPHA- BACILLUS STEAROTHERMOPHILUS  426-453 AMYLASE PRECURSORPAMYR_BACS8 RAW-STARCH-DIGESTING BACILLUS SP  210-237  435-465  615-642AMYLASE PAMY_AERHY ALPHA-AMYLASE AEROMONAS HYDROPHILA  415-453 PRECURSORPAMY_ALTHA ALPHA-AMYLASE ALTEROMONAS HALOPLANKTIS  166-193 PRECURSORPAMY_BACAM ALPHA-AMYLASE BACILLUS AMYLOLIQUE-  102-136 PRECURSOR FACIENSPAMY_BACCI ALPHA-AMYLASE BACILLUS CIRCULANS  212-239  437-474 PRECURSORPAMY_BACME ALPHA-AMYLASE BACILLUS MEGATERIUM  61-88  441-482 PRECURSORPAMY_BACSU ALPHA-AMYLASE BACILLUS SUBTILIS  165-205  281-308 PRECURSORPAMY_BUTFI ALPHA-AMYLASE BUTYRIVIBRIO FIBRISOLVENS  377-418  546-573 579-606  795-822 PRECURSOR PAMY_CLOAB PUTATIVE ALPHA-AMYLASECLOSTRIDIUM ACETOBUTYLICUM  283-310 PAMY_CLOTU ALPHA-AMYLASE CLOSTRIDUMTHERMO-  431-468  612-642 PRECURSOR SULFUROGENES PAMY_STRLMALPHA-AMYLASE STREPTOMYCES LIMOSUS  173-200 PRECURSOR PANFA_AZOVINITROGEN FIXATION AZOTOBACTER VINELANDII  232-259 PROTEIN ANFAPANFD_AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII  95-122 PROTEINALPHA CHAIN PANFK_AZOVI NITROGENASE IRON-IRON AZOTOBACTER VINELANDII 369-396 PROTEIN BETA CHAIN PANGR_VIBAN ANGR PROTEIN VIBRIO ANGUILLARIUM 93-120  169-203 PAPCE_FREDI PHYCOBILISOME 120 KD FREMYELLA DIPLOSIPHON 51-78 LINKER POLYPEPTIDE PAPCE_SYNP6 PHYCOBILISOME LINKER SYNECHOCOCCUSSP  37-64  585-615 POLYPEPTIDE PAPCE_SYNY4 PHYCOBILISOME 120 KDSYNECHOCYSTIS SP  52-79 LINKER POLYPEPTIDE PAPHC_SALTY ALKYLHYDROPEROXIDE SALMONELLA TYPHIMURIUM  62-89 REDUCTASE C22 PROTEINPAPI_ACHLY PROTEASE I PRECURSOR ACHROMOBACTER LYTICUS  478-505PAPPC_ECOLI PROBABLE CYTOCHROME ESCHERICHIA COLI  118-148 OXIDASESUBUNIT I PAPRD_PSEAE ALKALINE PROTEASE SECRE- PSEUDOMONAS AERUGINOSA 416-450 TION PROTEIN APRD PAPRE_PSEAE ALKALINE PROTEASE SECRE-PSEUDOMONAS AERUGINOSA  133-193  208-235  247-277 TION PROTEIN APREPAPT_ECOLI ADENINE PHOSPHORIBOSYL- ESCHERICHIA COLI  121-148 TRANSFERASEPAPU_THEET ALPHA-AMYLASE- THERMOANAEROBACTER  276-303  347-374  936-982 987-1014 1210-1254 1381-1408 PULLULANASE PRECURSOR ETHANOLICUSPARCA_MYCAR ARGININE DEIMINASE MYCOPLASMA ARGININI  60-87  218-245PARCB_ECOLI AEROBIC RESPIRATION ESCHERICHIA COLI  102-150  302-329 399-426 CONTROL PROTEIN ARCB PARCD_PSEAE PROBABLE ARGININE/ PSEUDOMONASAERUGINOSA  274-301  386-420 ORNITHINE ANTIPORTER PARGA_ECOLI AMINO-ACIDACETYL- ESCHERICHIA COLI  82-109 TRANSFERASE PARGT_ECOLILYS-ARG-ORN-BINDING ESCHERICHIA COLI  84-111 PROTEIN (LAO) PRECURSOPAROA_STAAU PHOSPHOSHIKIMATE 1- STAPHYLOCOCCUS AUREUS  86-120CARBOXYVINYLTRANSFER PAROC_ECOLI CHORISMATE SYNTHASE ESCHERICHIA COLI 68-95 PAROC_SALTI CHORISMATE SYNTHASE SALMONELLA TYPHI  68-95PAROD_BACSU DEHYDROQUINATE BACILLUS SUBTILIS  49-76 DEHYDRATASEPAROK_ECOLI SHIKIMATE KINASE I ESCHERICHIA COLI  84-118 PARP4_STRPY IGARECEPTOR PRECURSOR STREPTOCOCCUS PYOGENES  12-46  127-157  266-324PARP_ECOLI ARP PROTEIN ESCHERICHIA COLI  255-282 PARSA_ECOLI ARSENICALPUMP-DRIVING ESCHERICHIA COLI  201-238 ATPASE PARSB_ECOLI ARSENICAL PUMPESCHERICHIA COLI  291-318 MEMBRANE PROTEIN PARSB_STAAU ARSENICAL PUMPSTAPHYLOCOCCUS AUREUS  27-71  295-322 MEMBRANE PROTEIN PARSB_STAXYARSENICAL PUMP STAPHYLOCOCCUS XYLOSUS  27-71  295-322 MEMBRANE PROTEINPARSR_STAAU ARSENICAL RESIST OPERON STAPHYLOCOCCUS AUREUS  56-93REPRESSOR PROTEIN PARTA_ECOLI ARTA PROTEIN ESCHERICHIA COLI   3-30PARTI_ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI  105-132  213-240 PROTEINARTI PARTP_ECOLI TRANSPORT SYSTEM ESCHERICHIA COLI  176-206 PROTEIN ARTPPASA1_ENTFA AGGREGATION SUBSTANCE ENTEROCOCCUS FAECALIS  195-254 478-505  799-826  859-896 PRECURSOR PASNA_ECOLI ASPARTATE-AMMONIAESCHERICHIA COLI  127-158 LIGASE PASNB_ECOLI ASPARAGINE SYNTHETASE BESCHERICHIA COLI  450-477 PASNC_ECOLI REGULATORY PROTEIN ASNCESCHERICHIA COLI  116-143 PASPA_BACSU ASPARTATE AMMONIA- BACILLUSSUBTILIS   7-34 LYASE PASPA_ECOLI ASPARTATE AMMONIA- ESCHERICHIA COLI 204-236 LYASE PASPA_SERMA ASPARTATE AMMONIA- SERRATIA MARCESCENS 204-231 LYASE PASPG_BACLI L-ASPARAGINASE BACILLUS LICHENIFORMIS 252-288 PASPG_ERWCH L-ASPARAGINASE ERWINIA CHRYSANTHEMI  188-218PRECURSOR PASPQ_ACIGL GLUTAMINASE- ACINETOBACTER GLUTA-  46-80ASPARAGINASE MINASIFICANS PASSY_ECOLI ARGININOSUCCINATE ESCHERICHIA COLI 354-381 SYNTHASE PASSY_METBA ARGININOSUCCINATE METHANOSARCINA BARKERI 287-314 SYNTHASE PATBP_STAAU POTENTIAL ATP-BINDING STAPHYLOCOCCUSAUREUS  41-68  201-245 PROTEIN PATKA_ENTFA POTASSIUM/COOPER-ENTEROCOCCUS FAECALIS  41-80  347-374 TRANSPORTING ATPASE A PATKB_ENTFAPOTASSIUM/COOPER- ENTEROCOCCUS FAECALIS  280-310  450-477 TRANSPORTINGATAPSE B PATMB_SALTY MG (2+) TRANSPORT ATPASE, SALMONELLA TYPHIMURIUM 503-530 P-TYPE PATP6_SYNP6 ATP SYNTHASE A CHAIN SYNECHOCOCCUS SP 233-260 PATP6_VIBAL ATP SYNTHASE A CHAIN VIBRIO ALGINOLYTICUS  11-38PATPA_ANASP ATP SYNTHASE ALPHA ANABAENA SP   9-36  96-130 CHAINPATPA_BACME ATP SYNTHASE ALPHA BACILLUS MEGATERIUM   4-36  453-480 CHAINPATPA_ECOLI ATP SYNTHASE ALPHA ESCHERICHIA COLI  486-513 CHAINPATPA_ENTFA ATP SYNTHASE ALPHA ENTEROCOCCUS FAECALIS   4-36  484-518CHAIN PATPA_MYCGA ATP SYNTHASE ALPHA MYCOPLASMA GALLISEPTICUM  362-409CHAIN PATPA_PROMO ATP SYNTHASE ALPHA PROPIONIGENIUM MODESTUM   6-36CHAIN PATPA_RHORU ATP SYNTHASE ALPHA RHODOSPIRILLUM RUBRUM  165-200 459-486 CHAIN PATPA_SULAC ATPASE ALPHA CHAIN SULFOLOBUS ACIDOCALDARIUS 318-345  562-589 PATPA_SYNP1 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP   7-44CHAIN PATPA_SYNP6 ATP SYNTHASE ALPHA SYNECHOCOCCUS SP   8-45  362-389CHAIN PATPA_SYNY3 ATP SYNTHASE ALPHA SYNECHOCYSTIS SP   8-37  454-500CHAIN PATPA_THEP3 ATP SYNTHASE ALPHA THERMOPHILIC BACTERIUM PS-3   9-36CHAIN PATPA_VIBAL ATP SYNTHASE ALPHA VIBRIO ALGINOLYTICUS  464-513 CHAINPATPB_ANASP ATP SYNTHASE BETA CHAIN ANABAENA SP  280-307  370-397PATPB_BACFI ATP SYNTHASE BETA CHAIN BACILLUS FIRMUS  163-190  358-385PATPB_MYCGA ATP SYNTHASE BETA CHAIN MYCOPLASMA GALLISEPTICUM  375-402PATPB_RHORU ATP SYNTHASE BETA CHAIN RHODOSPIRILLUM RUBRUM  359-386PATPB_SULAC ATPASE BETA CHAIN SULFOLOBUS ACIDOCALDARIUS  164-191PATPB_SYNP1 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP  381-408PATPB_SYNP6 ATP SYNTHASE BETA CHAIN SYNECHOCOCCUS SP  291-318  381-408PATPB_SYNY3 ATP SYNTHASE BETA CHAIN SYNECHOCYSTIS SP  381-408PATPD_ANASP ATP SYNTHASE DELTA CHAIN ANABAENA SP  109-139  143-170PATPD_BACFI ATP SYNTHASE DELTA CHAIN BACILLUS FIRMUS  63-90  133-160PATPD_BACME ATP SYNTHASE DELTA CHAIN BACILLUS MEGATERIUM  132-159PATPD_ENTFA ATP SYNTHASE DELTA CHAIN ENTEROCOCCUS FAECALIS  14-41PATPD_PROMO ATP SYNTHASE DELTA CHAIN PROPIONIGENIUM MODESTUM  79-116 118-149 PATPD_RHOBL ATP SYNTHASE DELTA CHAIN RHODOPSEUDOMONAS BLASTICA 125-152 PATPD_RHORU ATP SYNTHASE DELTA CHAIN RHODOSPIRILLUM RUBRUM 119-146 PATPD_SYNP1 ATP SYNTHASE DELTA CHAIN SYNECHOCOCCUS SP  100-127PATPD_SYNY3 ATP SYNTHASE DELTA CHAIN SYNECHOCYSTIS SP  113-147PATPD_VIBAL ATP SYNTHASE DELTA CHAIN VIBRIO ALGINOLYTICUS  110-137PATPE_BACFI ATP SYNTHASE EPSILON BACILLUS FIRMUS  53-80 CHAINPATPE_MYCGA ATP SYNTHASE EPSILON MYCOPLASMA GALLISEPTICUM  99-126 CHAINPATPE_PROMO ATP SYNTHASE EPSILON PROPIONIGENIUM MODESTUM  100-127 CHAINPATPE_SYNP1 ATP SYNTHASE EPSILON SYNECHOCOCCUS SP  72-106 CHAINPATPF_ANASP ATP SYNTHASE B CHAIN ANABAENA SP  17-44  51-78  137-164PATPF_BACFI ATP SYNTHASE B CHAIN BACILLUS FIRMUS  110-151 PATPF_BACMEATP SYNTHASE B CHAIN BACILLUS MEGATERIUM  55-85  122-170 PATPF_MYCGA ATPSYNTHASE B CHAIN MYCOPLASMA GALLISEPTICUM  82-135  170-197 PATPF_SNYP1ATP SYNTHASE B CHAIN SYNECHOCOCCUS SP  15-49  111-159 PATPF_SYNP6 ATPSYNTHASE B CHAIN SYNECHOCOCCUS SP  12-39  128-155 PATPF_THEP3 ATPSYNTHASE B CHAIN THERMOPHILIC BACTERIUM PS-3  50-77 PRECURSORPATPG_ANASP ATP SYNTHASE GAMMA ANABAENA SP  276-310 CHAIN PATPG_ECOLIATP SYNTHASE GAMMA ESCHERICHIA COLI  253-283 CHAIN PATPG_MYCGA ATPSYNTHASE GAMMA MYCOPLASMA GALLISEPTICUM  28-62  92-140 CHAIN PATPG_RHORUATP SYNTHASE GAMMA RHODOSPIRILLUM RUBRUM  270-297 CHAIN PATPG_SYNP1 ATPSYNTHASE GAMMA SYNECHOCOCCUS SP  280-307 CHAIN PATPG_SYNY3 ATP SYNTHASEGAMMA SYNECHOCYSTIS SP  96-126  280-307 CHAIN PATP1_MYCGA ATP SYNTHASEPROTEIN I MYCOPLASMA GALLISPETICUM  133-167 PATPX_ANASP ATP SYNTHASE B′CHAIN ANABAENA SP  129-156 PATPX_BACFI ATP SYNTHASE BETA CHAIN BACILLUSFIRMUS  162-189  356-383 PATPX_RHORU ATP SYNTHASE B′ CHAINRHODOSPIRILLUM RUBRUM  40-74 PATPX_SYNP1 ATP SYNTHASE B′ CHAINSYNECHOCOCCUS SP  57-110  128-155 PATPX_SYNP6 ATP SYNTHASE B′ CHAINSYNECHOCOCCUS SP  70-100 PATPX_SYNY3 ATP SYNTHASE B′ CHAIN SYNECHOCYSTISSP  108-135 PATPZ_BACME ATP SYNTHASE PROTEIN I BACILLUS MEGATERIUM 14-62 PATPZ_SYNP1 ATP SYNTHASE PROTEIN I SYNECHOCOCCUS SP  90-131PAVRB_PSESG AVIRULENCE B PROTEIN PSEUDOMONAS SYRINGAE  184-211  233-260PBA71_EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP  26-53 DEHYDROGENASEPBA72_EUBSP 7-ALPHA-HYDROXYSTEROID EUBACTERIUM SP  26-53 DEHYDROGENASEPBACH_HALHM HALORHODOPSIN HALOBACTERIUM HALOBIUM  145-179 PBACH_HALSGHALORHODOPSIN HALOBACTERIUM SP  180-214 PRECURSOR PBAES_ECOLI SENSORPROTEIN BAES ESCHERICHIA COLI  152-186 PBAG_STRAG IGA FC RECEPTORSTREPTOCOCCUS AGALACTIAE  92-119  138-204  267-306  343-385  487-524 562-589 1014-1041 PRECURSOR PBAHG_VITSP BACTERIAL HEMOGLOBINVITREOSCILLA SP  119-146 PBAIC_EUBSP BILE ACID-INDUCIBLE EUBACTERIUM SP 423-450 OPERON PROTEIN C PBARA_ECOLI SENSOR PROTEIN BARA ESCHERICHIACOLI  334-361  425-455 PBASS_ECOLI SENSOR PROTEIN BASS ESCHERICHIA COLI 122-156 PBAT_HALHA PUTATIVE BACTERIO-OPSIN HALOBACTERIUM HALOBIUM 408-442 ACTIVATOR PBAX_ECOLI BAX PROTEIN ESCHERICHIA COLI  21-64PBCCP_ECOLI BIOTIN CARBOXYL CARRIER ESCHERICHIA COLI   6-35 PROTEINPBCHH_RHOCA METHYLTRANSFERASE RHODOBACTER CAPSULATUS 1000-1032PBCHN_RHOCA PROTOCHLOROPHYLLIDE RHODOBACTER CAPSULATUS  249-276REDUCTASE 46 KD CHAIN PBCN5_CLOPE BACTERIOCIN BCN5 CLOSTRIDIUMPERFRINGENS  72-99  585-646 PBCPA_PROAE BACTERIOCHLOROPHYLL APROSTHECOCHLORIS AESTUARII  63-93 PROTEIN PBCSC_ACEXY CELLULOSE SYNTHASEACETOBACTER XYLINUM  131-158 1055-1082 OPERON C PROTEIN PBCSD_ACEXYCELLULOSE SYNTHASE ACETOBACTER XYLINUM  10-37 OPERON D PROTEINPBENA_ACICA BENZOATE 1,2-DIOXYGENASE ACINETOBACTER CALCOACETICUS 190-217 ALPHA SUBUNIT PBETT_ECOLI HIGH AFFINITY CHOLINE ESCHERICHIACOLI  243-270 TRANSPORT PROTEIN PBEXA_HAEIN BEXA PROTEIN HAEMOPHILUSINFLUENZAE  23-50 PBEXC_HAEIN BEXC PROTEIN HAEMOPHILUS INFLUENZAE 157-184  226-253 PBEXD_HAEIN BEXD PROTEIN HAEMOPHILUS INFLUENZAE 205-239 PBFR_NITWI BACTERIOFERRITIN NITROBACTER WINOGRADSKYI   8-35PBGA2_ECOLI EVOLVED BETA-GALACTO- ESCHERICHIA COLI  955-985 SIDASEALPHA-SUBUNIT PBGAL_BACST BETA-GALACTOSIDASE BACILLUS STEAROTHERMOPHILUS 599-633 PBGAL_CLOAB BETA-GALACTOSIDASE CLOSTRIDIUM ACETOBUTYLICUM 824-851 PBGAL_CLOTU BETA-GALACTOSIDASE CLOSTRIDIUM THERMO-  161-191SULFUROGENES PBGAL_KLEPN BETA-GALACTOSIDASE KLEBSIELLA PNEUMONIAE 245-272 PBGAL_LACDE BETA-GALACTOSIDASE LACTOBACILLUS DELBRUECKII 305-332 PBGAL_STRTR BETA-GALACTOSIDASE STREPTOCOCCUS THERMOPHILUS 188-215 PBGAL_SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS  59-86 179-206 PBGAM_LEULA BETA-GALACTOSIDASE LEUCONOSTOC LACTIS  129-156SMALL SUBUNIT PBGAM_SULSO BETA-GALACTOSIDASE SULFOLOBUS SOLFATARICUS 106-140 PBGLA_CLOTM BETA-GLUCOSIDASE A CLOSTRIDIUM THERMOCELLUM 353-380  418-445 PBGLB_CLOTM THERMOSTABLE BETA- CLOSTRIDIUMTHERMOCELLUM  259-286  375-409  554-581  631-665 GLUCOSIDASE BPBGLR_ECOLI BETA-GLUCURONIDASE ESCHERICHIA COLI  464-494  536-563PBGLS_AGRSP BETA-GLUCOSIDASE AGROBACTERIUM SP  421-448 PBGLS_BUTFIBETA-GLUCOSIDASE A BUTYRIVIBRIO FIBRISOLVENS  85-112  435-462  692-719 738-765 PBIN3_STAAU POTENTIAL DNA-INVERTASE STAPHYLOCOCCUS AUREUS 60-87 BIN3 PBINL_STAAU TRANSPOSON TN552 STAPHYLOCOCCUS AUREUS  163-197RESOLVASE PBINR_STAAU DNA-INVERTASE BINR STAPHYLOCOCCUS AUREUS  163-190PGIOA_BACSH AMINOTRANSFERASE BACILLUS SPHAERICUS  33-60 PBIOB_BACSHBIOTIN SYNTHETASE BACILLUS SPHAERICUS  145-172 PBIOB_ECOLI BIOTINSYNTHETASE ESCHERICHIA COLI  130-157 PBIOD_BACSH DETHIOBIOTIN SYNTHASEBACILLUS SPHAERICUS  144-171 PBLA1_BACCE BETA-LACTAMASE BACILLUS CEREUS 91-118  275-305 PRECURSOR, TYPE I PBLA1_HAEIN BETA-LACTAMASE ROB-1HAEMOPHILUS INFLUENZAE  152-179  204-231 PRECURSOR PBLA2_BACCEBETA-LACTAMASE BACILLUS CEREUS  18-67  201-228 PRECURSOR, TYPE IIPBLA2_BACSP BETA-LACTAMASE BACILLUS SP  18-67 PRECURSOR, TYPE IIPBLA3_BACCE BETA-LACTAMASE BACILLUS CEREUS  35-83  95-129 PRECURSOR,TYPE III PBLA4_PSEAE BETA-LACTAMASE PSE-4 PSEUDOMONAS AERUGINOSA  19-50PRECURSOR PBLAB_BACCE BETA-LACTAMASE BACILLUS CEREUS  20-66  200-227PRECURSOR, TYPE II PBLAB_BACFR BETA-LACTAMASE BACTEROIDES FRAGILIS 22-49 PRECURSOR, TYPE II PBLAC_BACCE BETA-LACTAMASE BACILLUS CEREUS 93-120  276-303 PRECURSOR, TYPE I PBLAC_BACLI BETA-LACTAMASE BACILLUSLICHENIFORMIS  47-74  86-115 PRECURSOR PBLAC_PROMI BETA-LACTAMASEPROTEUS MIRABILIS  191-221 PRECURSOR PBLAC_PROVU BETA-LACTAMASE PROTEUSVULGARIS   4-38  240-267 PBLAC_STRAL BETA-LACTAMASE STREPTOMYCES ALBUS G 43-70 PRECURSOR PBLAD_KLEPN BETA-LACTAMASE KLEBSIELLA PNEUMONIAE 121-148 PRECURSOR PBLAI_STAAU PENICILLINASE REPRESSOR STAPHYLOCOCCUSAUREUS  19-74  99-126 PBLAO_ECOLI BETA-LACTAMASE ESCHERICHIA COLI 118-166  235-262 PRECURSOR PBLAP_ECOLI BETA-LACTAMASE PSE-2 ESCHERICHIACOLI  155-196 PRECURSOR PBLAR_BACLI REGULATORY PROTEIN BACILLUSLICHENIFORMIS  129-156  515-552 BLAR1 PBLAR_STAAU REGULATORY PROTEINSTAPHYLOCOCCUS AUREUS  87-114  122-161  234-261  281-312  503-539 BLAR1PBMP_TREPA BASIC MEMBRANE PROTEIN TREPONEMA PALLIDUM  312-346 PRECURSORPBMR_BACSU MULTIDRUG RESISTANCE BACILLUS SUBTILIS  277-304 PROTEINPBNZA_PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  36-63 ALPHASUBUNIT PBNZB_PSEPU BENZENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  119-153BETA SUBUNIT PBNZD_PSEPU P4 SUBUNIT PSEUDOMONAS PUTIDA  179-213PBPS2_DESAM BPS2 PROTEIN DESULFUROLOBUS AMBIVALENS  157-237  242-290 311-355  391-425  543-573 PBRAB_PSEAE CARRIER PROTEIN PSEUDOMONASAERUGINOSA  260-287  313-340 PBRAE_PSEAE TRANSPORT PROTEIN BRAEPSEUDOMONAS AERUGINOSA  254-281 PBRAG_PSEAE BRAG PROTEIN PSEUDOMONASAERUGINOSA   7-34 PBTUB_ECOLI VITAMIN B12 RECEPTOR ESCHERICHIA COLI 439-466 PRECURSOR PBTUE_ECOLI VITAMIN B12 TRANSPORT ESCHERICHIA COLI  6-33 PERIPLASMIC PROTEIN PBVGA_BORPE TRANSCRIPTION REGULATORBORDETELLA PERTUSSIS  174-205 BVGA BORDETELLA BRONCHISEPTICA PBVGB_BORPEPERIPLASMIC PROTEIN BVGB BORDETELLA PERTUSSIS  116-143 PRECURSORPBVGC_BORPE SENSOR PROTEIN BVGC BORDETELLA PERTUSSIS  39-66  202-229PBVGS_BORBR VIRULENCE BVGS PROTEIN BORDETELLA BRONCHISEPTICA  113-143 341-368  501-531 PRECURSOR PBXA_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUMBOTULINUM  313-340  686-729  733-762  815-842  851-893  968-9951159-1207 TYPE A PRECURSOR PBXB_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUMBOTULINUM  666-693  720-762  802-832  853-890 1004-1031 1058-1089 TYPE BPRECURSOR PBXC1_CLOBO BOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  86-113 314-341  730-773  798-825  850-892 TYPE C1 PRECURSOR PBXD_CLOBOBOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  473-500  526-576  727-770 804-831  847-892  906-963 1060-1087 TYPE D PRECURSOR PBXE_CLOBOBOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  254-291  350-381  704-753 773-811  890-914  992-1019 1115-1149 TYPE E PRECURSOR PBXE_CLOBUBOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  254-291  350-381  704-753 774-808  890-917  992-1019 1115-1149 TYPE E PRECURSOR PBXF_CLOBOBOTULINUM NEUROTOXIN CLOSTRIDIUM BOTULINUM  669-710  735-772  892-9191013-1040 1095-1122 1183-1210 TYPE F PRECURSOR PC550_MICAE CYTOCHROMEC550 MICROCYSTIS AERUGINOSA   3-30 PCADA_BACFI PROBABLE CADMIUM-BACILLUS FIRMUS  30-57  100-131  165-192  276-306  533-567 TRANSPORTINGATPASE PCADA_STAAU PROBABLE CADMIUM- STAPHYLOCOCCUS AUREUS  282-309 536-570 TRANSPORTING ATPASE PCADC_ECOLI TRANSCRIPTIONAL ESCHERICHIACOLI  54-85  412-443 ACTIVATOR CADC PCAFA_YERPE F1 CAPSULE ANCHORINGYERSINIA PESTIS  203-240  416-457  530-557  619-646 PROTEIN PRECURSORPCAPA_BACAN CAPA PROTEIN BACILLUS ANTHRACIS  108-138 PCAPB_BACAN CAPBPROTEIN BACILLUS ANTHRACIS  36-70 PCAPP_ANANI PHOSPHOENOLPYRUVATEANACYSTIS NIDULANS  248-293 CARBOXYLASE PCAPP_ANASP PHOSPHOENOLPYRUVATEANABAENA SP  98-125  157-184  687-728 CARBOXYLASE PCAPP_CORGLPHOSPHOENOLPYRUVATE CORYNEBACTERIUM GLUTMICUM  15-42 CARBOXYLASEPCAPP_ECOLI PHOSPHOENOLPYRUVATE ESCHERICHIA COLI  35-62 CARBOXYLASEPCARA_BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS  274-319 SYNTHASEPCARB_BACSU CARBAMOYL-PHOSPHATE BACILLUS SUBTILIS  790-831 SYNTHASEPCARB_ECOLI CARBAMOYL-PHOSPHATE ESCHERICHIA COLI  454-481 SYNTHASE LARGECHAI PCAT2_STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS   7-34  87-114ACETYLTRANSFERASE PCAT3_STAAU CHLORAMPHENICOL STAPHYLOCOCCUS AUREUS  7-34  87-114 ACETYLTRANSFERASE PCATA_ACICA CATECHOL 1,2-DIOXYGENASEACINETOBACTER CALCOACETICUS  31-65 PCATA_BACST PEROXIDASE/CATALASEBACILLUS STEAROTHERMOPHILUS  440-470 PCATA_ECOLI CATALASE HPIESCHERICHIA COLI  579-606 PCATA_MICLU CATALASE MICROCOCCUS LUTEUS 453-480 PCATA_SALTY CATALASE HPI SALMONELLA TYPHIMURIUM  515-542 580-607 PCATE_ECOLI CATALASE HPII ESCHERICHIA COLI  175-202 PCAT_CAMCOCHLORAMPHENICOL CAMPYLOBACTER COLI  84-111 ACETYLTRANSFERASE PCAT_CLOBUCHLORAMPHENICOL CLOSTRIDIUM BUTYRICUM  88-115 ACETYLTRANSFERASEPCAT_ECOLI CHLORAMPHENICOL ESCHERICHIA COLI  92-119 ACETYLTRANSFERASEPCAT_PROMI CHLORAMPHENICOL PROTEUS MIRABILIS  92-119 ACETYLTRANSFERASEPCAT_STAIN CHLORAMPHENICOL STAPHYLOCOCCUS INTERMEDIUS   7-34  87-114ACETYLTRANSFERASE PCAT_STRAG CHLORAMPHENICOL STREPTOCOCCUS AGALACTIAE  7-34  87-114 ACETYLTRANSFERASE PCBHE_COXBU CBHE PROTEIN COXIELLABURNETII  209-236 PCBPT_THEVU CARBOXYPEPTIDASE T THERMOACTINOMYCESVULGARIS  48-75 PRECURSOR PCCA_ECOLI TRNA NUCLEOTIDYL- ESCHERICHIA COLI 376-403 TRANSFERASE PCCMK_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP 29-56 CCMK PCCMM_SYNP7 CO2 CONC MECH PROTEIN SYNECHOCOCCUS SP  212-256 331-372  445-486 CCMM PCDAS_THEET CYCLOMALTODEXTRINASETHERMOANAEROBACTER  305-332 ETHANOLICUS PCDG1_BACMA CYCLOMALTODEXTBACILLUS MACERANS  439-466  616-643 GLUCANOTRANS PRECURSOR PCDG2_BACMACYCLOMALTODEXT BACILLUS MACERANS  210-251  436-466  615-642 GLUCANOTRANSPRECURSOR PCDGT_BACCI CYCLOMALTODEXT BACILLUS CIRCULANS  217-244 442-472  594-651 GLUCANOTRANS PRECURSOR PCDGT_BACLI CYCLOMALTODEXTBACILLUS LICHENIFORMIS  217-244  442-472  594-647 GLUCANOTRANS PRECURSORPCDGT_BACOH CYCLOMALTODEXT BACILLUS OHBENSIS  430-471 GLUCANOTRANSPRECURSOR PCDGT_BAC50 CYCLOMALTODEXT BACILLUS SP  210-237  435-462 615-642 GLUCANOTRANS PRECURSOR PCDGT_BAC52 CYCLOMALTODEXT BACILLUS SP 409-471 GLUCANOTRANS PRECURSOR PCDGT_BAC53 CYCLOMALTODEXT BACILLUS SP 210-237  435-462  614-641 GLUCANOTRANS PRECURSOR PCDGT_BACSPCYCLOMALTODEXT BACILLUS SP  210-237  435-465  615-642 GLUCANOTRANSPRECURSOR PCDGT_BACSS CYCLOMALTODEXT BACILLUS SP  217-244  442-472 594-651 GLUCANOTRANS PRECURSOR PCDGT_BACST CYCLOMALTODEXT BACILLUSSTEAROTHERMOPHILUS  586-646 GLUCANOTRANS PRECURSOR PCDGT_KLEPNCYCLOMALTODEXT KLEBSIELLA PNEUMONIAE  212-239 GLUCANOTRANS PRECURSORPCEA1_ECOLI COLICIN E1 PROTEIN ESCHERICHIA COLI  44-71  285-326PCEA1_SHISO COLICIN E1* PROTEIN SHIGELLA SONNEI  44-71  284-325  413-440PCEA2_ECOLI COLICIN E2 ESCHERICHIA COLI  334-368 PCEA3_ECOLI COLICIN E3ESCHERICHIA COLI  334-368 PCEA6_ECOLI COLICIN E6 ESCHERICHIA COLI 334-368 PCEAB_ECOLI COLICIN B ESCHERICHIA COLI  283-341 PCEAD_ECOLICOLICIN D ESCHERICHIA COLI  284-311 PCEAM_ECOLI COLICIN M ESCHERICHIACOLI  178-227 PCEAN_ECOLI COLICIN N ESCHERICHIA COLI  119-146  173-200PCEA_CITFR COLICIN A CITROBACTER FREUNDII  228-258 PCEFD_STRCLISOPENICILLIN N EPIMERASE STREPTOMYCES CLAVULIGERUS  370-397 PCEIA_ECOLICOLICIN IA PROTEIN ESCHERICHIA COLI  68-95  255-282  378-412  415-452PCEIB_ECOLI COLICIN IB PROTEIN ESCHERICHIA COLI  68-95  255-282  378-412 415-452 PCELA_ACEXY UTP URIDYLYLTRANSFERASE ACETOBACTER XYLINUM  59-89PCELA_ECOLI PROTEIN CELA ESCHERICHIA COLI  76-103 PCFAA_ECOLI CFA/1FIMBRIAL SUBUNIT A ESCHERICHIA COLI  27-58 PRECURSOR PCFAC_ECOLI CFA/1FIMBRIAL SUBUNIT C ESCHERICHIA COLI  138-187  388-456  561-595 PRECURSORPCFAD_ECOLI CFA/1 FIMBRIAL SUBUNIT D ESCHERICHIA COLI  133-160PCFAE_ECOLI CFA/1 FIMBRIAL SUBUNIT E ESCHERICHIA COLI  180-207  244-271PCH10_ACYPS 10 KD CHAPERONIN ACYRTHOSIPHON PISUM  57-95 SYMBIOTICBACTERIU PCH10_BACSU 10 KD CHAPERONIN BACILLUS SUBTILIS  66-93PCH10_CHLTR 10 KD CHAPERONIN CHLAMYDIA TRACHOMATIS  64-91 PCH10_ECOLI 10KD CHAPERONIN ESCHERICHIA COLI  57-84 PCH10_HAEDU 10 KD CHAPERONINHAEMOPHILUS DUCREYI  68-95 PCH10_LEGMI 10 KD CHAPERONIN LEGIONELLAMICDADEI  57-84 PCH10_RICTS 10 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI 65-92 PCH10_THEP3 10 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3  66-93PCH60_ACYPS 60 KD CHAPERONIN ACYRTHOSIPHON PISUM  341-382 SYMBIOTICBACTERIU PCH60_AGRTU 60 KD CHAPERONIN AGROBACTERIUM TUMEFACIENS  117-163 339-370  425-466 PCH60_AMOPS 60 KD CHAPERONIN AMOEBA PROTEUS SYMBIOTIC 299-333 BACTERIUM PCH60_BACSU 60 KD CHAPERONIN BACILLUS SUBTILIS 298-332  337-364 PCH60_BORBU 60 KD CHAPERONIN BORRELIA BURGODORFERI 125-163  299-368 PCH60_BRUAB 60 KD CHAPERONIN BRUCELLA ABORTUS  117-144 339-366 PCH60_CHLPN 60 KD CHAPERONIN CHLAMYDIA PNEUMONIAE   4-31PCH60_CHLTR 60 KD CHAPERONIN CHLAMYDIA TRACHOMATIS   4-31 PCH60_CHRVI 60KD CHAPERONIN CHROMATIUM VINOSUM  300-327 PCH60_CLOAB 60 KD CHAPERONINCLOSTRIDIUM ACETOBUTYLICUM  238-332  337-364  455-482 PCH60_CLOPE 60 KDCHAPERONIN CLOSTRIDIUM PERFRINGENS  337-368  417-444 PCH60_COXBU 60 KDCHAPERONIN COXIELLA BURNETII  300-327  348-382 PCH60_HAEDU 60 KDCHAPERONIN HAEMOPHILUS DUCREYI  339-366  417-444 PCH60_LEGMI 60 KDCHAPERONIN LEGIONELLA MICDADEI  299-333 PCH60_LEGPN 60 KD CHAPERONINLEGIONELLA PNEUMOPHILA  298-332  452-479 PCH60_MYCLE 60 KD CHAPERONINMYCOBACTERIUM LEPRAE  125-152  236-263  337-364 PCH60_MYCTU 60 KDCHAPERONIN MYCOBACTERIUM TUBERCULOSIS  125-152  337-364 & BOVISPCH60_PSEAE 60 KD CHAPERONIN PSEUDOMONAS AERUGINOSA  339-366 PCH60_RHILV60 KD CHAPERONIN RHIZOBIUM LEGUMINOSARUM  117-163  322-370  425-466PCH60_RICTS 60 KD CHAPERONIN RICKETTSIA TSUTSUGAMUSHI  103-130  293-336 360-394 PCH60_SYNP7 60 KD CHAPERONIN SYNECHOCOCCUS SP  308-335  337-380PCH60_SYNY3 60 KD CHAPERONIN SYNECHOCYSTIS SP  338-365  455-489PCH60_THEP3 60 KD CHAPERONIN THERMOPHILIC BACTERIUM PS-3  337-364PCH62_STRAL 60 KD CHAPERONIN 2 STREPTOMYCES ALBUS G  116-148  337-364PCHB_VIBHA N,N′-DIACETYLCHITOBIASE VIBRIO HARVEYI  21-48  772-799PRECURSOR PCHEA_BACSU CHEMOTAXIS PROTEIN CHEA BACILLUS SUBTILIS  373-400 590-617 PCHEA_ECOLI CHEMOTAXIS PROTEIN CHEA ESCHERICHIA COLI  256-286PCHEA_SALTY CHEMOTAXIS PROTEIN CHEA SALMONELLA TYPHIMURIUM  162-197PCHER_BACSU CHEMOTAXIS PROTEIN BACILLUS SUBTILIS  124-151METHYLTRANSFERASE PCHEW_ECOLI PURINE-BINDING CHEMO- ESCHERICHIA COLI 68-115 TAXIS PROTEIN PCHEW_SALTY PURINE-BINDING CHEMO- SALMONELLATYPHIMURIUM  88-115 TAXIS PROTEIN PCHEY_ECOLI CHEMOTAXIS PROTEIN CHEYESCHERICHIA COLI  22-49 PCHEY_SALTY CHEMOTAXIS PROTEIN CHEY SALMONELLATYPHIMURIUM  22-49 PCHI1_BACCI CHITINASE A1 PRECURSOR BACILLUS CIRCULANS 491-518  566-593 PCHIA_ALTSO CHITINASE A PRECURSOR ALTEROMONAS SP 345-372 PCHIA_SERMA CHITINASE A PRECURSOR SERRATIA MARCESCENS  346-373PCHID_BACCI CHITINASE D PRECURSOR BACILLUS CIRCULANS  102-161  189-216PCHIT_SACER CHITINASE SACCHAROPOLYSPORA ERYTHRAEA  92-119 PCHIT_STRPLCHITINASE 63 PRECURSOR STREPTOMYCES PLICATUS  250-284 PCHMU_BACSUCHORISMATE MUTASE BACILLUS SUBTILIS   3-37 PCHOD_BREST CHOLESTEROLOXIDASE BREVIBACTERIUM STEROLICUM  263-290 PRECURSOR PCHTA_VIBCH CHOLERAENTEROTOXIN, A VIBRIO CHOLERAE  79-106 CHAIN PRECURSOR PCHVA_AGRTUBETA-(1->2)GLUCAN EXPORT AGROBACTERIUM TUMEFACIENS   4-31  181-208PROTEIN PCHVE_AGRTU RECEPTOR PROTEIN CHVE AGROBACTERIUM TUMEFACIENS 100-127 PRECURSOR PCIRI_CITFR CITROLYSIN PROTEIN I CITROBACTER FREUNDII 435-462 PCIRA_ECOLI COLICIN I RECEPTOR ESCHERICHIA COLI  146-173PRECURSOR PCISA_BACSU PUTATIVE DNA BACILLUS SUBTILIS  378-405RECOMBINASE PCISY_ACIAN CITRATE SYNTHASE ACINETOBACTER ANITRATUM 143-170 PCISY_BACCO CITRATE SYNTHASE BACILLUS COAGULANS  24-51PCITA_SALTY CITRATE-PROTON SYMPORT SALMONELLA TYPHIMURIUM  154-181PCITN_KLEPN CITRATE-SODIUM SYMPORT KLEBSIELLA PNEUMONIAE  194-221PCITN_SALDU CITRATE-SODIUM SYMPORT SALMONELLA DUBLIN  194-221PCITN_SALPU CITRATE-SODIUM SYMPORT SALMONELLA PULLORUM  194-221PCLCA_PSEPU CHLOROCATECHOL 1,2- PSEUDOMONAS PUTIDA  13-36 DIOXYGENASEPCLD1_ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI  133-167 MINANT PROTEINPCLD2_ECOLI CHAIN LENGTH DETER- ESCHERICHIA COLI  178-212  250-277MINANT PROTEIN PCLD_SALTY CHAIN LENGTH DETER- SALMONELLA TYPHIMURIUM 96-127  151-212 MINANT PROTEIN PCLOS_CLOHI ALPHA-CLOSTRIPAINCLOSTRIDIUM HISTOLYTICUM  30-58  497-524 PRECURSOR PCLPA_ECOLIATP-BINDING SUBUNIT CLPA ESCHERICHIA COLI  655-695 PCLPA_RHOBL CLPAHOMOLOG PROTEIN RHODOPSEUDOMONAS BLASTICA  439-466 PCLPB_BACNO CLPBHOMOLOG PROTEIN BACTEROIDES NODOSUS  116-157  442-476  558-595PCLPB_ECOLI CLPB PROTEIN ESCHERICHIA COLI  444-489  563-590 PCLPX_AZOVICLPX HOMOLOG PROTEIN AZOTOBACTER VINELANDII  215-242  332-359PCLPX_ECOLI ATP-BINDING SUBUNIT CLPX ESCHERICHIA COLI  255-282PCN16_ECOLI 2′,3′-CYCLIC-NUC 2′- ESCHERICHIA COLI  50-77PHOSPHODIESTERASE PRECURS PCODA_ECOLI CYTOSINE DEAMINASE ESCHERICHIACOLI  102-129 PCOM1_BACSU A COMPETENCE PROTEIN 1 BACILLUS SUBTILIS 108-135  186-213 PCOMQ_BACSU COMPETENCE REGULATORY BACILLUS SUBTILIS 154-239 PROTEIN PCOP6_STAAU COP-6 PROTEIN STAPHYLOCOCCUS AUREUS   7-53PCOPB_PSESM COPPER RESISTANCE PSEUDOMONAS SYRINGAE  140-167 PROTEIN BPRECURSOR PCORA_ECOLI MAGNESIUM/COBALT ESCHERICHIA COLI  134-161TRANSPORT PROTEIN CORA PCORA_SALTY MAGNESIUM/COBALT SALMONELLATYPHIMURIUM  134-161 TRANSPORT PROTEIN CORA PCOTE_BACSU SPORE COATPROTEIN E BACILLUS SUBTILIS  42-92 PCOX1_BRAJA CYTOCHROME C OXIDASEBRADYRHIZOBIUM JAPONICUM  380-407 POLYPEPTIDE I PCOX1_PARDE CYTOCHROME COXIDASE PARACOCCUS DENITRIFICANS  383-410 POLYPEPTIDE I PCOX1_RHOSHCYTOCHROME C OXIDASE RHODOBACTER SPHAEROIDES  396-423 POLYPEPTIDE IPCOXX_BACFI OXIDASE ASSEMBLY FACTOR BACILLUS FIRMUS  36-63 PCOXX_BACSUOXIDASE ASSEMBLY FACTOR BACILLUS SUBTILIS  49-76 PCPPB_NEIGO CRYPTICPLASMID PROTEIN B NEISSERIA GONORRHOEAE  72-99  165-209 PCPSB_ECOLIMANNOSE-1-PHOSPHATE ESCHERICHIA COLI  309-336 GUANYLYLTRANSFERASEPCPSB_SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM  311-338GUANYLYLTRANSFERASE PCPXA_ECOLI SENSOR PROTEIN CPXA ESCHERICHIA COLI 254-281 PCPXG_STRSQ CYTOCHROME P450 105C1 STREPTOMYCES SP  157-184PCPXJ_SACER 6-DEOXYERYTHRONOLIDE B SACCHAROPOLYSPORA ERYTHRAEA  233-260(DEB) HYDROXYLASE PCPXM_BACSU CYTOCHROME P450 109 BACILLUS SUBTILIS 240-283 PCPXN_ANASP PROBABLE CYTOCHROME ANABAENA SP  98-125 P450PCR27_BACTI 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  153-187PCR27_BACTM 27 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  153-187PCR41_BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308PCR42_BACSH 1.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308PCR43_BACSH 41.9 KD INSECTICIDAL TOXIN BACILLUS SPHAERICUS  276-308PCR70_BACTD 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  207-234 252-279  429-463 PCR70_BACTO 75 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  57-84  125-159  427-464 PCR70_BACTT 70 KD CRYSTAL PROTEINBACILLUS THURINGIENSIS  199-226  244-271  421-455 PCR71_BACTK 70 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  93-133  191-218  552-615PCR72_BACTI 72 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  74-111 383-414 PCR72_BACTK 70 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 93-133  191-218  552-593 PCR77_BACTI 77 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  308-335  502-529 PCREC_ECOLI SENSOR PROTEIN CRECESCHERICHIA COLI  103-130 PCRED_ECOLI INNER MEMBRANE PROTEIN ESCHERICHIACOLI  94-121 CRED PCRP_ECOLI CATABOLITE GENE ACTI- ESCHERICHIA COLI & 26-53  127-154 VATOR SHIGELLA FLEXNERI PCRP_SALTY CATABOLITE GENE ACTI-SALMONELLA TYPHIMURIUM  26-53  127-154 VATOR KLEBSIELLA AEROGENESPCRTI_ERWHE PHYTOENE DEHYDROGENASE ERWINIA HERBICOLA  231-258PCRTI_RHOCA PHYTOENE DEHYDROGENASE RHODOBACTER CAPSULATUS  389-416PCRTJ_RHOCA CRTJ PROTEIN RHODOBACTER CAPSULATUS  133-160  334-361 431-458 PCRYS_BACTA 132 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 721-755  875-902 PCRYS_BACTB 130 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  730-771  865-892 1053-1080 PCRYS_BACTE 133 KD CRYSTALPROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYS_BACTI 130 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  218-252  701-728  775-802PCRYS_BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  737-771 865-892 1053-1080 PCRYS_BACTS 130 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  736-770  890-917 PCRYT_BACTA 130 KD CRYSTAL PROTEINBACILLUS THURINGIENSIS  730-771  865-892 1053-1080 PCRYT_BACTE 134 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  745-779  899-926 PCRYT_BACTI 130KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  217-251  354-384  701-728 775-802 PCRYT_BACTK 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS 737-771  865-892 PCRYU_BACTA 135 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  736-770  890-917 PCRYU_BACTI 130 KD CRYSTAL PROTEINBACILLUS THURINGIENSIS  217-251  700-727  774-801 PCRYU_BACTK 131 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  738-772  866-893 1054-1081PCRYV_BACTA 130 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  737-771 865-892 1053-1080 PCRYV_BACTI 135 KD CRYSTAL PROTEIN BACILLUSTHURINGIENSIS  110-151  745-772  819-846 PCRYV_BACTK 133 KD CRYSTALPROTEIN BACILLUS THURINGIENSIS  736-770  890-917 PCRYW_BACTA 130 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  745-779 PCRYW_BACTK 133 KDCRYSTAL PROTEIN BACILLUS THURINGIENSIS  608-659  662-696  892-919PCRYX_BACTK 139 KD CRYSTAL PROTEIN BACILLUS THURINGIENSIS  92-119 227-254  605-632  783-817  937-964 PCS32_ECOLI CS3 PILI SYNTHESIS 63 KDESCHERICHIA COLI  42-69  226-253  290-317  344-378 PROTEIN PCS33_ECOLICS3 PILI SYNTHESIS 48 KD ESCHERICHIA COLI  90-117  154-181  208-242PROTEIN PCS34_ECOLI CS3 PILI SYNTHESIS 33 KD ESCHERICHIA COLI  20-47 74-108 PROTEIN PCSG_HALHA CELL SURFACE GLYCO- HALOBACTERIUM HALOBIUM 256-283  584-611 PROTEIN PRECURSOR PCSG_HALVO CELL SURFACE GLYCO-HALOBACTERIUM VOLCANII  143-170  237-271 PROTEIN PRECURSOR PCSG_METFECELL SURFACE GLYCO- METHANOTHERMUS FERVIDUS  59-107 PROTEIN PRECURSORPCSG_METSC CELL SURFACE GLYCO- METHANOTHERMUS SOCIABILIS  59-107 PROTEINPRECURSOR PCSOB_ECOLI CS1 FIMBRIAL SUBUNIT B ESCHERICHIA COLI  25-56PRECURSOR PCTFA_CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUM ACETOBUTYLICUM 118-145 A PCTFB_CLOAB COA-TRANSFERASE SUBUNIT CLOSTRIDIUMACETOBUTYLICUM  174-208 B PCTRB_NEIME INNER-MEMBRANE PROTEIN NEISSERIAMENINGITIDIS  152-193 CTRB PCTX_PSEAE CYTOTOXIN PRECURSOR PSEUDOMONASAERUGINOSA  78-115  124-151  160-194  217-251 PCVAA_ECOLI COLICIN VSECRETION ESCHERICHIA COLI  104-138  163-219 PROTEIN CVAA PCVAB_ECOLICOLICIN V SECRETION ESCHERICHIA COLI  151-178 PROTEIN CVAB PCWPM_BACBRMIDDLE CELL WALL PROTEIN BACILLUS BREVIS  197-224  411-438 1010-1044PRECURSOR PCWPO_BACBR OUTER CELL WALL PROTEIN BACILLUS BREVIS  178-216 560-587  947-988 PRECURSOR PCYAA_BORPE ADENYLATE CYCLASE BORDETELLAPERTUSSIS  48-75  632-659  962-996 PRECURSOR PCYAA_YERIN ADENYLATECYCLASE YERSINIA INTERMEDIA  343-387  593-620 PCYAB_BORPE CYAB PROTEINBORDETELLA PERTUSSIS  541-568 PCYAD_BORPE CYAD PROTEIN BORDETELLAPERTUSSIS  178-212 PCYAE_BORPE CYAE PROTEIN BORDETELLA PERTUSSIS 313-340 PCYB_RHOCA CYTOCHROME B RHODOBACTER CAPSULATUS  38-65PCYDD_ECOLI TRANSPORT PROTEIN CYDD ESCHERICHIA COLI   3-30  382-409PCYF_NOSSP APOCYTOCHROME F NOSTOC SP  209-243 PRECURSOR PCYMO_ACISPCYCLOHEXANONE MONO- ACINETOBACTER SP  439-473 OXYGENASE PCYNT_SYNP7CARBONIC ANHYDRASE SYNECHOCOCCUS SP  170-200 PCYNX_ECOLI CYNX PROTEINESCHERICHIA COLI  53-80 PCYOB_ECOLI CYTOCHROME O UBIQUINOL ESCHERICHIACOLI  31-58 OXIDASE SUBUNIT 1 PCYPH_SYNP7 PEPTIDYL-PROLYL CIS-TRANSSYNECHOCOCCUS SP  107-141 ISOMERASE PCYSA_ECOLI SULFATE PERMEASE AESCHERICHIA COLI  164-191 PROTEIN PCYSB_ECOLI CYS REGULON TRANS-ESCHERICHIA COLI   3-30 CRIPTIONAL ACTIVATOR PCYSB_SALTY CYS REGULONTRANS- SALMONELLA TYPHIMURIUM   3-30 CRIPTIONAL ACTIVATOR PCYSE_ECOLISERINE ACETYL- ESCHERICHIA COLI  164-191 TRANSFERASE PCYSE_SALTY SERINEACETYL- SALMONELLA TYPHIMURIUM  164-191 TRANSFERASE PCYSG_ECOLI SIROHEMSYNTHASE ESCHERICHIA COLI  405-432 PCYSG_SALTY SIROHEM SYNTHASESALMONELLA TYPHIMURIUM  405-432 PCYSN_ECOLI SULFATE ADENYLATEESCHERICHIA COLI  64-91 TRANSFERASE SUBUNIT 1 PCYSW_ECOLI SULFATEPERMEASE W ESCHERICHIA COLI  201-228 PROTEIN PCYSW_SYNP7 SULFATEPERMEASE W SYNECHOCOCCUS SP  211-238 PROTEIN PCZCB_ALCEU CATION EFFLUXSYSTEM ALCALIGENES EUTROPHUS  241-268  283-320  364-391 PROTEIN CZCBPCZCD_ALCEU CATION EFFLUX SYSTEM ALCALIGENES EUTROPHUS  139-169 PROTEINCZCD PDACB_BACSU PENICILLIN-BINDING BACILLUS SUBTILIS  80-107 PROTEIN 5*PRECURSOR PDADA_ECOLI D-AMINO ACID DEHYDRO- ESCHERICHIA COLI  127-154GENASE PDAGA_ALTHA NA(+)-LINKED D-ALANINE ALTEROMONAS HALOPLANKTIS 332-373 GLYCINE PERMEASE PDAMX_ECOLI DAMX PROTEIN ESCHERICHIA COLI 68-95  349-380 PDAPA_ECOLI DIHYDRODIPICOLINATE ESCHERICHIA COLI  27-54 157-184 SYNTHASE PDAT1_BACSU DNA-PROTEIN-CYSTEINE BACILLUS SUBTILIS 13-47 METHYLTRANSFERASE PDBHA_ECOLI DNA-BINDING PROTEIN HU- ESCHERICHIACOLI  12-39 ALPHA PDBH_CLOPA DNA-BINDING PROTEIN HU CLOSTRIDIUMPASTEURIANUM  12-53 PDCAM_ECOLI DECARBOXYLASE ESCHERICHIA COLI  146-173PROENZYME PDCDA_CORGL DIAMINOPIMELATE CORYNEBACTERIUM GLUTMICUM  134-161DECARBOXYLASE PDCDA_PSEAE DIAMINOPIMELATE PSEUDOMONAS AERUGINOSA  57-84DECARBOXYLASE PDCEB_ECOLI GLUTAMATE DECARBOXY- ESCHERICHIA COLI   4-31LASE BETA PDCHS_ENTAE HISTIDINE DECARBOXYLASE ENTEROBACTER AEROGENES 111-138 PDCHS_KLEPL HISTIDINE DECARBOXYLASE KLEBSIELLA PLANTICOLA 111-138 PDCHS_MORMO HISTIDINE DECARBOXYLASE MORGANELA MORGANII  111-138PDCID_BACSU DIPEPTIDE TRANSPORT BACILLUS SUBTILIS  188-222 PROTEIN DCIADPDCLY_HAFAL LYSINE DECARBOXYLASE HAFNIA ALVEI  305-332 PDCOA_KLEPNOXALOACETATE DECARB- KLEBSIELLA PNEUMONIAE  261-288  342-369 OXYLASEALPHA CHAIN PDCOA_SALTY OXALOACETATE DECARB- SALMONELLA TYPHIMURIUM 261-288  342-369 OXYLASE ALPHA CHAIN PDCOB_SALTY OXALOACETATE DECARB-SALMONELLA TYPHIMURIUM  299-326 OXYLASE BETA CHAIN PDCTB_RHILE TRANSPORTSENSOR RHIZOBIUM LEGUMINOSARUM  377-411 PROTEIN DCTB PDCTB_RHIMETRANSPORT SENSOR RHIZOBIUM MELILOTI  511-538 PROTEIN DCTB PDEAD_ECOLIATP-DEPENDENT RNA ESCHERICHIA COLI  268-295  518-545 HELICASE DEADPDEAD_KLEPN ATP-DEPENDENT RNA KLEBSIELLA PNEUMONIAE  267-294  519-546HELICASE DEAD PDEDA_ECOLI DEDA PROTEIN ESCHERICHIA COLI  106-133PDEGS_BACSU SENSOR PROTEIN DEGS BACILLUS SUBTILIS  31-70  75-159 292-327 PDEH2_MORSP HALOACETATE DEHALO- MORAXELLA SP  114-141 GENASEH-2 PDEOC_ECOLI DEOXYRIBOSE-PHOSPHATE ESCHERICHIA COLI  134-161 ALDOLASEPDHAL_PSEOL ALDEHYDE DEHYDRO- PSEUDOMONAS OLEOVORANS   6-33 GENASEPDHAS_BACSU ASPARTATE-SEMIALDEHYDE BACILLUS SUBTILIS  150-184DEHYDROGENASE PDHAS_CORGL ASPARTATE-SEMIALDEHYDE CORYNEBACTERIUMGLUTMICUM  43-70  312-339 DEHYDROGENASE PDHAS_ECOLIASPARTATE-SEMIALDEHYDE ESCHERICHIA COLI  229-256 DEHYDROGENASEPDHAS_VIBCH ASPARTATE-SEMIALDEHYDE VIBRIO CHOLERAE  309-336DEHYDROGENASE PDHA_BACSH ALANINE DEHYDROGENASE BACILLUS SPHAERICUS 149-176 PDHA_BACST ALANINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS 94-121 PDHE2_CLODI NAD-SPECIFIC GLUTAMATE CLOSTRIDIUM DIFFICILE 116-143 DEHYDROGENASE PDHE2_PEPAS D-SPECIFIC GLUTAMATEPEPTOSTREPTOCOCCUS  247-274  345-380 DEHYDROGENASE ASACCHAROLYTICUSPDHE3_SULSO GLUTAMATE DEHYDRO- SULFOLOBUS SOLFATARICUS   2-36 GENASEPDHE4_CORGL NADP-SPECIFIC GLUTAMATE CORYNEBACTERIUM GLUTMICUM  188-215 229-256 DEHYDROGENASE PDHGA_ACICA GLUCOSE DEHYDROGENASE- ACINETOBACTERCALCOACETICUS  10-59  190-217 A PDHGB_BACME GLUCOSE 1-DEHYDRO- BACILLUSMEGATERIUM  27-57 GENASE B PDHG_ECOLI GLUCOSE DEHYDROGENASE ESCHERICHIACOLI  436-463 PDHK1_STRVN KETOACYL REDUCASE 1 STREPTOMYCES VIOLACEORUBER 168-195 PDHLE_BACST LEUCINE DEHYDROGENASE BACILLUS STEAROTHERMOPHILUS 192-219 PDHLO_AGRT4 D-LYSOPINE DEHYDRO- AGROBACTERIUM TUMEFACIENS 317-344 GENASE PDHM1_METEX METHANOL DEHYDRO- METHYLOBACTERIUM  153-187 190-224 GENASE SUBUNIT 1 PREC EXTORQUENS PDHM1_METOR METHANOL DEHYDRO-METHYLOBACTERIUM  153-187  190-224 GENASE SUBUNIT 1 PREC ORGANOPHILUMPDHM1_PARDE METHANOL DEHYDRO- PARACOCCUS DENITRIFICANS  195-222 GENASESUBUNIT 1 PREC PDHNA_BACSP NADH DEHYDROGENASE BACILLUS SP  284-314PDHNA_ECOLI NADH DEHYDROGENASE ESCHERICHIA COLI  180-214 PDHOM_BACSUHOMOSERINE DEHYDRO- BACILLUS SUBTILIS  73-107  406-433 GENASEPDHOM_CORGL HOMOSERINE DEHYDRO- CORYNEBACTERIUM GLUTMICUM  105-132GENASE PDHPH_BACSH PHENYLALANINE DEHYDRO- BACILLUS SPHAERICUS  212-239GENASE PDHSA_ECOLI SUCC DEHYDROGENASE ESCHERICHIA COLI  482-512FLAVOPROTEIN SUBUNIT PDHSS_ANACY SOLUBLE HYDROGENASE 42 ANABAENACYLINDRICA  86-113  130-168 KD SUBUNIT PDHSS_SYNP1 SOLUBLE HYDROGENASE,SYNECHOCOCCUS SP  133-160 SMALL SUBUNIT PDHTM_METME TRIMETHYLAMINEMETHYLOTROPHUS METHYLO-  439-466 DEHYDROGENASE PHILUS PDING_ECOLIPROBABLE ATP-DEPENDENT ESCHERICHIA COLI  584-611 HELICASE DINGPDIVB_BACSU DIVISION INITIATION BACILLUS SUBTILIS  54-82  144-141PROTEIN PDLD3_PSEPU DIHYDROLIPOAMIDE PSEUDOMONAS PUTIDA  93-120DEHYDROGENASE PDLDH_AZOVI LIPOAMIDE DEHYDRO- AZOTOBACTER VINELANDII 18-45  224-276 GENASE COMP (E3) PDLDH_BACST LIPOAMIDE DEHYDRO- BACILLUSSTEAROTHERMOPHILUS  82-124 GENASE COMP (E3) PDLDH_BACSU LIPOAMIDEDEHYDRO- BACILLUS SUBTILIS  82-109 GENASE COMP (E3) PDLDH_ECOLIDIHYDROLIPOAMIDE ESCHERICHIA COLI  108-135 DEHYDROGENASE PDLDH_PSEFLDIHYDROLIPOAMIDE PSEUDOMONAS FLUORESCENS  124-151  223-275 DEHYDROGENASEPDMPN_PSEPU PHENOL HYDROXYLASE P3 PSEUDOMONAS PUTIDA  63-90 PROTEINPDNA1_BACSU DNAK PROTEIN BACILLUS SUBTILIS  497-524  548-581 PDNA2_BASCUDNAK PROTEIN BACILLUS SUBTILIS  456-483 PDNAA_BACSU DNAA PROTEINBACILLUS SUBTILIS  316-380 PDNAA_BORBU DNAA PROTEIN BORRELIA BURGDORFERI 182-216  248-275  341-387  436-463 PDNAA_BUCAP DNAA PROTEIN BUCHNERAAPHIDICOLA  73-100  111-138  353-380 PDNAA_ECOLI DNAA PROTEINESCHERICHIA COLI  366-400 PDNAA_MICLU DNAA PROTEIN MICROCOCCUS LUTEUS 385-415 PDNAA_MYCCA DNAA PROTEIN MYCOPLASMA CAPRICOLUM   8-56  75-112 274-310  350-389 PDNAA_PROMI DNAA PROTEIN PROTEUS MIRABILIS  365-399PDNAA_PSEPU DNAA PROTEIN PSEUDOMONAS PUTIDA  398-439 PDNAA_SPICI DNAAPROTEIN SPIROPLASMA CITRI  45-72  76-110  145-180 PDNAB_CHLTR DNAB-LIKEPROTEIN CHLAMYDIA TRACHOMATIS  312-353 PDNAB_ECOLI DNAP PROTEINESCHERICHIA COLI  82-109 PDNAB_SALTY DNAP PROTEIN SALMONELLA TYPHIMURIUM 82-109 PDNAC_ECOLI DNAC PROTEIN ESCHERICHIA COLI  146-190 PDNAK_BACMEDNAK PROTEIN BACILLUS MEGATERIUM  497-524  548-581 PKNAK_BORBU DNAKPROTEIN BORRELIA BURGDORFERI  512-594 PDNAK_BRUOV DNAK PROTEIN BRUCELLAOVIS  248-275  512-546 PDNAK_CAUCR DNAK PROTEIN CAULOBACTER CRESCENTUS 561-588 PDNAK_CLOAB DNAK PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  499-526PDNAK_CLOPE DNAK PROTEIN CLOSTRIDIUM PERFRINGENS  496-527 PDNAK_METMADNAK PROTEIN METHANOSARCINA MAZEI  523-550 PDNAK_MYCTU DNAK PROTEINMYCOBACTERIUM TUBERCULOSIS  502-529 PDNAK_STRCO DNAK PROTEINSTREPTOMYCES COELICOLOR  45-72  533-572 PDNIR_ECOLI REGULATORY PROTEINDNIR ESCHERICHIA COLI  114-141 PDNLI_ZYMMO DNA LIGASE ZYMOMONAS MOBILIS 658-712 PDNRJ_STRPE TRANSDUCTION PROTEIN STREPTOMYCES PEUCETIUS  24-51DNRJ PDOCK_SULSO PROBABLE SIGNAL RECOG- SULFOLOBUS SOLFATARICUS  104-172NITION PARTICLE PROTE PDP3A_BACSU DNA POLYMERASE III, BACILLUS SUBTILIS 58-85  417-444 1382-1416 ALPHA CHAIN PDP3A_ECOLI DNA POLYMERASE III,ESCHERICHIA COLI  77-104 ALPHA CHAIN PDP3A_SACER DNA POLYMERASE III,SACCHAROPOLYSPORA ERYTHRAEA  230-257 ALPHA CHAIN PDP3A_SALTY DNAPOLYMERASE III, SALMONELLA TYPHIMURIUM  77-104 ALPHA CHAIN PDP3B_BACSUDNA POLYMERASE III, BETA BACILLUS SUBTILIS  212-239 CHAIN PDP3B_BORBUDNA POLYMERASE III, BETA BORRELIA BURGDORFERI  266-313 CHAIN PDP3B_BUCAPDNA POLYMERASE III, BETA BUCHNERA APHIDICOLA  31-62  308-359 CHAINPDP3B_MICLU DNA POLYMERASE III, BETA MICROCOCCUS LUTEUS  191-218 CHAINPDP3B_MYCCA DNA POLYMERASE III, BETA MYCOPLASMA CAPRICOLUM  36-70 CHAINPDP3B_PSEPU DNA POLYMERASE III, BETA PSEUDOMONAS PUTIDA  30-60 CHAINPDP3B_SPICI DNA POLYMERASE III, BETA SPIROPLASMA CITRI  78-112  129-177 273-310 CHAIN PDP3X_BACSU DNA POLYMERASE III SUB- BACILLUS SUBTILIS 231-272 UNITS AND GAMMA AND TAU PDPC2_ECOLI DNA PRIMASE TRAC-2ESCHERICHIA COLI  691-743 PDPC4_ECOLI DNA PRIMASE TRAC-4 ESCHERICHIACOLI  401-448 PDPND_STRPN DPND PROTEIN STREPTOCOCCUS PNEUMONIAE  79-120PDPO1_BACCA DNA POLYMERASE I BACILLUS CALDOTENOX  208-235 PDPO1_STRPNDNA POLYMERASE I STREPTOCOCCUS PNEUMONIAE  198-225  398-425  571-598 645-672 PDPO1_THEAQ DNA POLYMERASE THERMUS AQUATICUS  196-223  602-629PDPO1_THEFL DNA POLYMERASE THERMUS AQUATICUS  597-628 PDPO2_ECOLI DNAPOLYMERASE II ESCHERICHIA COLI  569-596 PDPOL_PYRFU DNA POLYMERASEPYROCOCCUS FURIOSUS  746-773 PDPOL_SULSO DNA POLYMERASE SULFOLOBUSSOLFATARICUS  379-406  436-463  625-659  747-774 PDPOL_THELI DNAPOLYMERASE THERMOCOCCUS LITORALIS  332-370  551-589  892-926 1004-10311153-1194 PDPP_LACLA DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS  716-753PDPP_LACLC DIPEPTIDYL PEPTIDASE IV LACTOCOCCUS LACTIS  716-753PDPS_ECOLI DNA PROTECTION DURING ESCHERICHIA COLI   4-45 STARVATIONPROTEIN PDRN1_STREQ DEOXYRIBONUCLEASE STREPTOCOCCUS EQUISIMILIS  33-60 291-318 PRECURSOR PDRRA_STRPE DAUNORUBICIN RESISTANCE STREPTOMYCESPEUCETIUS  286-313 ATP-BINDING PROTEI PDYRA_STAAU DIHYDROFOLATESTAPHYLOCOCCUS AUREUS  62-89 REDUCTASE TYPE I PE13B_BACCI GLUCANENDO-1,3-BETA- BACILLUS CIRCULANS  134-161  305-339  424-451 GLUCOSIDASEA1 PREC PEAE_ECOLI ATTACHING AND EFFACING ESCHERICHIA COLI  66-100 158-185  525-552  691-725  802-836  871-905 PROTEIN PEBGR_ECOLI EBGOPERON REPRESSOR ESCHERICHIA COLI  151-178 PROTEIN PEBR_STAAU ETHIDIUMBROMIDE RESIS- STAPHYLOCOCCUS AUREUS  68-98 TANCE PROTEIN PECHH_RHOCAENOYL-COA HYDRATASE RHODOBACTER CAPSULATUS  222-249 HOMOLOG PECPD_ECOLICHAPERONE PROTEIN ECPD ESCHERICHIA COLI  20-47 PRECURSOR PEDD_ZYMMOPHOSPHOGLUCONATE ZYMOMONAS MOBILIS  12-39 DEHYDRATASE PEDIN_STAAUEPIDERMAL CELL DIF INH STAPHYLOCOCCUS AUREUS  52-79  119-146 PRECURSORPEF2_DESMO ELONGATION FACTOR 2 DESULFUROCOCCUS MOBILIS  427-461PEF2_HALHA ELONGATION FACTOR 2 HALOBACTERIUM HALOBIUM  186-213PEF2_METVA ELONGATION FACTOR 2 METHANOCOCCUS VANNIELII  409-436PEF2_SULAC ELONGATION FACTOR 2 SULFOLOBUS ACIDOCALDARIUS  36-63  145-180PEF2_THEAC ELONGATION FACTOR 2 THERMOPLASMA ACIDOPHILUM  13-40  49-76 220-247 PEFG_ANANI ELONGATION FACTOR G ANACYSTIS NIDULANS  332-359PEFG_ECOLI ELONGATION FACTOR G ESCHERICHIA COLI  234-261 PEFG_MYCLEELONGATION FACTOR G MYCOBACTERIUM LEPRAE  211-259  330-357 PEFG_SALTYELONGATION FACTOR G SALMONELLA TYPHIMURIUM  234-261 PEFG_SPIPLELONGATION FACTOR G SPIRULINA PLATENSIS  334-374  481-511 PEFG_SYNY3ELONGATION FACTOR G SYNECHOCYSTIS SP  14-41 PEFT1_STRRA ELONGATIONFACTOR TU1 STREPTOMYCES RAMOCISSIMUS  221-258 PEFT2_STRRA ELONGATIONFACTOR TU2 STREPTOMYCES RAMOCISSIMUS  221-258 PEFT3_STRRA ELONGATIONFACTOR TU3 STREPTOMYCES RAMOCISSIMUS  228-255 PEFTS_ECOLI ELONGATIONFACTOR EF-TS ESCHERICHIA COLI  101-135 PEFTS_SPICI ELONGATION FACTOREF-TS SPIROPLASMA CITRI  27-54  134-161 PEFTU_BACFR ELONGATION FACTOR TUBACTEROIDES FRAGILIS  18-45  229-256 PEFTU_BACSU ELONGATION FACTOR TUBACILLUS SUBTILIS  11-45  230-257 PEFTU_BURCE ELONGATION FACTOR TUBURKHOLDERIA CEPACIA  26-53 PEFTU_CHLTR ELONGATION FACTOR TU CHLAMYDIATRACHOMATIS  218-245 PEFTU_DEISP ELONGATION FACTOR TU DEINONEMA SP 230-257 PEFTU_FLESI ELONGATION FACTOR TU FLEXISTIPES SINUSARABICI 221-248 PEFTU_HALMA ELONGATION FACTOR TU HALOARCULA MARISMORTUI   4-31PEFTU_MICLU ELONGATION FACTOR TU MICROCOCCUS LUTEUS  221-248 PEFTU_MYCHOELONGATION FACTOR TU MYCOPLASMA HOMINIS  222-249 PEFTU_MYCLE ELONGATIONFACTOR TU MYCOBACTERIUM LEPRAE  220-257 PEFTU_MYCTU ELONGATION FACTOR TUMYCOBACTERIUM TUBERCULOSIS  220-247 PEFTU_SHEPU ELONGATION FACTOR TUSHEWANELLA PUTREFACIENS  26-53 PEFTU_STROR ELONGATION FACTOR TUSTREPTOCOCCUS ORALIS  232-259 PELAS_PSEAE PSEUDOLYSIN PRECURSORPSEUDOMONAS AERUGINOSA  141-168 PELT1_ECOLI T-LABILE ENTEROTOXIN AESCHERICHIA COLI  78-105 CHAIN PRECURSOR PELT3_ECOLI T-LABILEENTEROTOXIN A ESCHERICHIA COLI  79-106 CHAIN PRECURSOR PELTB_CLOPET-LABILE ENTEROTOXIN B CLOSTRIDIUM PERFRINGENS  228-269 CHAIN PRECURSORPENTD_ECOLI ENTEROBACTIN SYNTHETASE ESCHERICHIA COLI  154-188 COMPONENTD PENVM_SALTY ENVM PROTEIN SALMONELLA TYPHIMURIUM  34-61 PEPIB_STAEP 117KD MEMBRANE ASSOCI- STAPHYLOCOCCUS EPIDERMIDIS  51-80  125-229  290-325 387-421  857-889 ATED PROTEIN PEPIC_STAEP EPIDERMIN BIOSYNTHESISSTAPHYLOCOCCUS EPIDERMIDIS  411-447 PROTEIN EPIC PEPIP_STAEP SERINEPROTEASE EPIP STAPHYLOCOCCUS EPIDERMIDIS   7-68  297-324 PRECURSORPEPIY_STAEP HYPOTHETICAL 16.7 KD STAPHYLOCOCCUS EPIDERMIDIS  70-101PROTEIN IN EPIA 5′ REGION PEPIZ_STAEP HYPOTHETICAL PROTEIN INSTAPHYLOCOCCUS EPIDERMIDIS  42-100 EPIA 5′ REGION PERA_ECOLI GTP-BINDINGERA PROTEIN ESCHERICHIA COLI  18-45 PERBS_SACER SENSORY TRANSDUCTIONSACCHAROPOLYSPORA ERYTHRAEA  209-243 PROTEIN ERYC1 PEREA_ECOLIERYTHROMYCIN ESTERASE ESCHERICHIA COLI  37-64  143-170 TYPE 1PERY3_SACER ERYTHRONOLIDE SYNTHASE, SACCHAROPOLYSPORA ERYTHRAEA   9-36 967-994 1117-1144 MODULES 5 AND 6 PESTA_STRSC ESTERASE PRECURSORSTREPTOMYCES SCABIES  128-155 PESTE_PSEFL ARYLESTERASE PSEUDOMONASFLUORESCENS  162-189 PETC1_STAAU ENTEROTOXIN TYPE C-1 STAPHYLOCOCCUSAUREUS  76-117  155-206 PRECURSOR PETC2_STAAU ENTEROTOXIN TYPE C-2STAPHYLOCOCCUS AUREUS  76-117  155-206 PRECURSOR PETC3_STAAU ENTEROTOXINTYPE C-3 STAPHYLOCOCCUS AUREUS  76-117  155-206 PRECURSOR PETXA_STAAUENTEROTOXIN TYPE A STAPHYLOCOCCUS AUREUS  26-69  165-192 PRECURSORPETXB_CLOPE EPSILON-TOXIN, TYPE B CLOSTRIDIUM PERFRINGENS  209-236PRECURSOR PETXB_STAAU ENTEROTOXIN TYPE B STAPHYLOCOCCUS AUREUS  64-101 173-207 PRECURSOR PETXD_STAAU ENTEROTOXIN TYPE D STAPHYLOCOCCUS AUREUS 153-200 PRECURSOR PETXE_STAAU ENTEROTOXIN TYPE E STAPHYLOCOCCUS AUREUS 26-69  88-115 PRECURSOR PEUTC_SALTY ETHANOLAMINE AMMONIA- SALMONELLATYPHIMURIUM  116-150 LYASE LIGHT CHAIN PEVGA_ECOLI PUTATIVETRANSCRIPTION ESCHERICHIA COLI  62-89 REG EVGA PEVGS_ECOLI PUTATIVESENSOR PROTEIN ESCHERICHIA COLI  45-79  249-276  431-458  526-553 829-856 EVGS PEX5B_ECOLI EXODEOXYRIBONUCLEASE V ESCHERICHIA COLI 226-253 PEXBB_ECOLI BIOPOLYMER TRANSPORT ESCHERICHIA COLI  80-107 EXBBPROTEIN PEXOA_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI  180-207SYNTHESIS PROTEIN EXOA PEXOA_STRPN EXODEOXYRIBONUCLEASE STREPTOCOCCUSPNEUMONIAE  218-254 PEXOF_RHIME EXOF PROTEIN RHIZOBIUM MELILOTI  236-270 327-361 PEXOH_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI  252-279SYNTHESIS PROTEIN EXOH PEXOP_RHIME SUCCINOGLYCAN BIO- RHIZOBIUM MELILOTI 211-242  272-299  350-391 SYNTHESIS PROTEIN EXOP PFADB_ECOLI FATTYOXIDATION COMPLEX ESCHERICHIA COLI  36-63  177-204 ALPHA SUBUNITPFADL_ECOLI FATTY ACID TRANSPORT ESCHERICHIA COLI  220-247 PROTEINPRECURSOR PFAED_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  223-257 421-453  507-541 FAED PRECURSOR PFAEF_ECOLI K88 MINOR FIMBRIAL SUB-ESCHERICHIA COLI  18-48 UNIT PRECURSOR PFAND_ECOLI FAND PROTEINPRECURSOR ESCHERICHIA COLI  160-194  386-423  596-623  730-757PFANE_ECOLI CHAPERONE PROTEIN FANE ESCHERICHIA COLI  22-58 PRECURSORPFANG_ECOLI FANG PROTEIN PRECURSOR ESCHERICHIA COLI  104-131 PFANH_ECOLIFANH PROTEIN PRECURSOR ESCHERICHIA COLI  83-141 PFAOB_PSERF FATTYOXIDATION COMPLEX PSEUDOMONAS FRAGI   8-42  295-322 ALPHA SUBUNITPFDHD_WOLSU FDHD PROTEIN WOLINELLA SUCCINOGENES  64-98 PFDHF_ECOLIFORMATE DEHYDROGENASE ESCHERICHIA COLI  613-640 PFDH_PSESR FORMATEDEHYDROGENASE PSEUDOMONAS SP  49-76  366-393 PFDNG_ECOLI FORMATEDEHYDROGENASE ESCHERICHIA COLI  288-315  323-350  696-730 PFECA_ECOLITRANSPORT PROTEIN FECA ESCHERICHIA COLI  531-561 PRECURSOR PFECC_ECOLITRANSPORT PROTEIN 1, ESCHERICHIA COLI  210-237 CYTOSOLIC PFECI_ECOLIFECI PROTEIN ESCHERICHIA COLI  131-158 PFEMB_STAAU POSSIBLE PROTEIN FEMBSTAPHYLOCOCCUS AUREUS  22-56 PFENR_SYNP2 FERREDOXIN-NADP SYNECHOCOCCUSSP   4-31 REDUCTASE PFEPC_ECOLI FERRIC ENTEROBACTIN ESCHERICHIA COLI 176-203 TRANSPORT PROTEIN FEPC PFEPE_ECOLI FERRIC ENTEROBACTINESCHERICHIA COLI  182-234  281-308 TRANSPORT PROTEIN FEPE PFEPG_ECOLIFERRIC ENTEROBACTIN ESCHERICHIA COLI  128-155 TRANSPORT PROTEIN FEPGPFERH_ANASP FERREDOXIN, HETEROCYST ANABAENA SP   2-29 PFERX_ANASPFERRODOXIN-LIKE PROTEIN ANABAENA SP  67-94 IN NIF REGION PFHAB_BORPEFILAMENTOUS HEMAG- BORDETELLA PERTUSSIS 1128-1158 1359-1386 2063-21142841-2868 3051-3085 3167-3194 GLUTININ PFHAC_BORPE HAEMOLYSIN-LIKEBORDETELLA PERTUSSIS  342-369 PROTEIN FHAC PRECURSOR PFHLA_ECOLI FORMATEHYDROGENLYASE ESCHERICHIA COLI  36-63  350-384  401-428 TRANSACTIVATORPFHUA_ECOLI FERRICHROME-IRON ESCHERICHIA COLI  458-485 RECEPTORPRECURSOR PFHUB_ECOLI PROTEIN FHUB PRECURSOR ESCHERICHIA COLI  227-254PFHUE_ECOLI OUTER-MEMBRANE ESCHERICHIA COLI  587-614 RECEPTOR PFIB_SPICIFIBRIL PROTEIN SPIROPLASMA CITRI  161-195  326-367 PFIC_ECOLI CELLFILAMENTATION ESCHERICHIA COLI  151-178 PROTEIN FIC PFIC_SALTY CELLFILAMENTATION SALMONELLA TYPHIMURIUM  151-178 PROTEIN FIC PFIMC_BORPEOUTER MEMBRANE PROTEIN BORDETELLA PERTUSSIS  208-235  540-567  618-645FIMC PRECURSOR PFIMC_ECOLI CHAPERONE PROTEIN FIMC ESCHERICHIA COLI 51-78 PRECURSOR PFIMD_ECOLI FIMD PROTEIN PRECURSOR ESCHERICHIA COLI 222-253  458-485  534-561  563-590 PFIME_ECOLI TYPE 1 FIMBRIAE REGULA-ESCHERICHIA COLI  165-192 TORY PROTEIN FIME PFIMY_SALTY FIMBRIAE YPROTEIN SALMONELLA TYPHIMURIUM  49-76 PFIMZ_ECOLI FIMBRIAE Z PROTEINESCHERICHIA COLI  42-69  162-192  196-230 PFIMZ_SALTY FIMBRIAE Z PROTEINSALMONELLA TYPHIMURIUM  175-209 PFINQ_ECOLI FINQ PROTEIN ESCHERICHIACOLI  145-172 PFIRA_RICRI FIRA PROTEIN RICKETTSIA RICKETTSII  162-189PFIXC_AZOCA FIXC PROTEIN AZORHIZOBIUM CAULINODANS  129-156 PFIXL_AZOCASENSOR PROTEIN FIXL AZORHIZOBIUM CAULINODANS  247-274 PFIXL_BRAJA SENSORPROTEIN FIXL BRADYRHIZOBIUM JAPONICUM  27-54  253-280 PFLA1_BORBUFLAGELLAR FILAMENT 41 KD BORRELIA BURGDORFERI   8-35  271-298 COREPROTEIN PFLA1_HALHA FLAGELLIN A1 PRECURSOR HALOBACTERIUM HALOBIUM  63-92 157-184 PFLA1_METVO FLAGELLIN B1 PRECURSOR METHANOCOCCUS VOLTAE  28-73 133-160 PFLA2_METVO FLAGELLIN B2 PRECURSOR METHANOCOCCUS VOLTAE  28-66PFLA3_HALHA FLAGELLIN B1 PRECURSOR HALOBACTERIUM HALOBIUM  36-63PFLA3_METVO FLAGELLIN B3 PRECURSOR METHANOCOCCUS VOLTAE  35-76PFLA4_HALHA FLAGELLIN B2 PRECURSOR HALOBACTERIUM HALOBIUM  36-90 157-184 PFLA5_HALHA FLAGELLIN B3 PRECURSOR HALOBACTERIUM HALOBIUM 36-63  154-181 PFLA6_BACSU FLAA LOCUS 22.9 KD BACILLUS SUBTILIS  73-149 155-186 PROTEIN PFLAA_COMCO FLAGELLIN A CAMPYLOBACTER COLI  15-42 144-191  497-535 PFLAA_CAMJE FLAGELLIN A CAMPYLOBACTER JEJUNI  220-266 310-337  500-538 PFLAA_METVO FLAGELLIN A PRECURSOR METHANOCOCCUS VOLTAE 28-62 PFLAA_PSEAE FLAGELLIN PSEUDOMONAS AERUGINOSA   3-41  51-88 97-124 PFLAA_RHIME FLAGELLIN RHIZOBIUM MELILOTI  181-219  228-265 360-391 PFLAA_SPIAU FLAGELLAR FILAMENT SPIROCHAETA AURANTIA  162-189PROTEIN PRECURSOR PFLAA_TREHY FLAGELLAR FILAMENT TREPONEMAHYODYSENTERIAE  55-89  219-285 PROTEIN PRECURSOR PFLAA_TREPA FLAGELLARFILAMENT TREPONEMA PALLIDUM  243-270 OUTER LAYER PROTEIN PFLAB_CAMCOFLAGELLIN B CAMPYLOBACTER COLI  144-191  497-535 PFLAB_CAMJE FLAGELLIN BCAMPYLOBACTER JEJUNI  220-266  310-337  500-538 PFLAB_RHIME FLAGELLINRHIZOBIUM MELILOTI  86-113  177-219  228-255  360-391 PFLAV_CLOMPFLAVODOXIN CLOSTRIDIUM MP  18-52 PFLAY_CAUCR REGULATORY PROTEIN FLAYCAULOBACTER CRESCENTUS  291-318  551-578 PFLA_BACSU FLAGELLIN BACILLUSSUBTILIS  102-129  228-255 PFLGG_BACSU FLAGELLAR BASAL-BODY BACILLUSSUBTILIS  62-89 ROD PROTEIN FLGG PFLGK_SALTY FLAGELLAR HOOK- SALMONELLATYPHIMURIUM  12-50  333-360  456-540 ASSOCIATED PROTEIN 1 PFLGL_ECOLIFLAGELLAR HOOK- ESCHERICHIA COLI  61-105  229-266 ASSOCIATED PROTEIN 3PFLGL_SALTY FLAGELLAR HOOK- SALMONELLA TYPHIMURIUM  61-105  229-266ASSOCIATED PROTEIN 3 PFLHD_ECOLI FLAGELLAR TRANSCRIP- ESCHERICHIA COLI  6-33 TIONAL ACTIVATOR FLHD PFLIA_PSEAE FLAGELLAR OPERON RNAPSEUDOMONAS AERUGINOSA  198-232 POL SIGMA FACTOR PFLIC_ECOLI FLAGELLINESCHERICHIA COLI   3-41  186-213  295-329  431-466 PFLIC_SALCH FLAGELLINSALMONELLA CHOLERAE-SUIS   5-41  54-125  136-198 PFLIC_SALMU FLAGELLINSALMONELLA MUENCHEN   5-41  54-88  136-177  232-259  272-299  376-403PFLIC_SALPA FLAGELLIN SALMONELLA PARATYPHI-A   5-41  54-125  136-184PFLIC_SALRU FLAGELLIN SALMONELLA RUBISLAW   5-41  54-125  136-196PFLIC_SALTY FLAGELLIN SALMONELLA TYPHIMURIUM   5-41  54-125  136-200PFLIC_SERMA FLAGELLIN SERRATIA MARCESCENS  15-42  55-89  103-130 137-164  275-321 PFLID_ECOLI FLAGELLAR HOOK- ESCHERICHIA COLI  32-66 106-133  160-187  216-298  386-445 ASSOCIATED PROTEIN 2 PFLID_SALTYFLAGELLAR HOOK- SALMONELLA TYPHIMURIUM  32-66  106-133  255-299  407-438ASSOCIATED PROTEIN 2 PFLIE_BACSU FLAG HOOK-BASAL BACILLUS SUBTILIS  8-35 BODY PROTEIN FLIE PFLIF_BACSU FLAGELLAR M-RING BACILLUS SUBTILIS 327-361  391-418 PROTEIN PFLIF_CAUCR FLAGELLAR M-RING CAULOBACTERCRESCENTUS  24-51  297-324  361-388 PROTEIN PFLIF_SALTY FLAGELLAR M-RINGSALMONELLA TYPHIMURIUM  484-529 PROTEIN PFLIG_BACSU FLAGELLAR SWITCHBACILLUS SUBTILIS  35-62 PROTEIN FLIG PFLIG_ECOLI FLAGELLAR SWITCHESCHERICHIA COLI  44-71 PROTEIN FLIG PFLIH_BACSU PROBABLE FLIH PROTEINBACILLUS SUBTILIS  19-46  105-132 PFLIJ_BACSU FLAGELLAR FLIJ PROTEINBACILLUS SUBTILIS   7-37 PFLIJ_SALTY FLAGELLAR FLIJ PROTEIN SALMONELLATYPHIMURIUM  75-118 PFLIK_BACSU PROBABLE FLIK PROTEIN BACILLUS SUBTILIS 77-104  117-144 PFLIL_BACSU FLIL PROTEIN BACILLUS SUBTILIS  30-71 78-105  109-136 PFLIL_ECOLI FLIL PROTEIN ESCHERICHIA COLI  105-132PFLIL_SALTY FLIL PROTEIN SALMONELLA TYPHIMURIUM  103-133 PFLIM_BACSUFLIM PROTEIN BACILLUS SUBTILIS  148-175 PFLIM_ECOLI FLIM PROTEINESCHERICHIA COLI  251-278 PFLIN_CAUCR FLAGELLAR MOTOR SWITCH CAULOBACTERCRESCENTUS  56-83 PROTEIN PFLIS_ECOLI FLAGELLAR PROTEIN FLIS ESCHERICHIACOLI  59-86 PFLIT_SALTY FLAGELLAR PROTEIN FLIT SALMONELLA TYPHIMURIUM  9-46  67-106 PFM12_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA 30-67  80-114 PRECURSOR PFM1A_ECOLI TYPE-1 FIMBRIAL PROTEIN,ESCHERICHIA COLI   5-32 A CHAIN PRECURSOR PFM1C_ECOLI TYPE-1 FIMBRIALPROTEIN, ESCHERICHIA COLI  11-38 C CHAIN PRECURSOR PFM1_ACTVI FIMBRIALSUBUNIT TYPE 1 ACTINOMYCES VISCOSUS  248-282  352-379  417-444 PRECURSORPFM98_ECOLI FIMBRIAL PROTEIN 987P ESCHERICHIA COLI  114-141 PRECURSORPFMA0_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  110-137 PRECURSORPFMA1_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-134 PRECURSORPFMA2_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-134 PRECURSORPFMA7_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  110-137 PRECURSORPFMAA_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  123-150 PRECURSORPFMAF_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  107-141 PRECURSORPFMAH_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  95-122 PRECURSORPFMAI_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  111-145 PRECURSORPFMAJ_BACNO FIMBRIAL PROTEIN BACTEROIDES NODOSUS  96-123 PRECURSORPFMCD_PSEAE FIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  70-97 PRECURSORPFMDD_BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS  106-144  355-382ASSEMBLY PROTEIN FIMD PFMDH_BACNO POSSIBLE FIMBRIAL BACTEROIDES NODOSUS 106-144  355-382 ASSEMBLY PROTEIN FIMD PFMF3_ECOLI F17 FIMBRIAL PROTEINESCHERICHIA COLI  97-124 PRECURSOR PFMM1_NEIME FIMBRIAL PROTEINNEISSERIA MENINGITIDIS  70-97 PRECURSOR PFMM2_NEIGO FIMBRIAL PROTEINNEISSERIA GONORRHOEAE  66-97 PRECURSOR PFMM_MORNO FIMBRIAL PROTEINMORAXELLA NONLIQUEFACIENS  108-146 PRECURSOR PFMP1_PSEAE FIMBRIALPROTEIN PSEUDOMONAS AERUGINOSA  30-67  80-114 PRECURSOR PFMP3_PSEAEFIMBRIAL PROTEIN PSEUDOMONAS AERUGINOSA  70-97 PRECURSOR PFMS1_ECOLI CS1FIMBRIAL SUBUNIT A ESCHERICHIA COLI  60-87  112-139 PRECURSORPFMS3_ECOLI CS3 FIMBRIAL SUBUNIT A ESCHERICHIA COLI  49-98 PRECURSORPFM_HAEIN MAJOR FIMBRIAL SUBUNIT HAEMOPHILUS INFLUENZAE  102-129PRECURSOR PFNBA_STAAU FIBRONECTIN-BINDING STAPHYLOCOCCUS AUREUS  41-83 188-215  311-365  431-458  517-555  652-686  722-756 PROTEIN PRECURSORPFOLC_ECOLI FOLYPOLYGLUTAMATE ESCHERICHIA COLI  125-159 SYNTHASEPFOLC_LACCA FOLYPOLYGLUTAMATE LACTOBACILLUS CASEI  129-156 SYNTHASEPFPG_BACFI FORMAMIDOPYRIMIDINE- BACILLUS FIRMUS  153-180 DNA GLYCOSYLASEPFRDA_ECOLI FUMARATE REDUCTASE ESCHERICHIA COLI  395-422 FLAVOPROTEINSUBUNIT PFRDA_WOLSU FUMARATE REDUCTASE WOLINELLA SUCCINOGENES   8-35 487-514 FLAVOPROTEIN SUBUNIT PFRZE_(—MYXXA) GLIDING MOTILITY REGULA-MYXOCOCCUS XANTHUS  15-42  478-505 TORY PROTEIN PFTHS_CLOTHFORMATE--TETRAHYDRO- CLOSTRIDIUM THERMOACETUM  163-190 FOLATE LIGASEPFTR_METTH FORMYLTRANSFERASE METHANOBACTERIUM   9-43 THERMOAUTOTROPHICUPFTSA_BACSU CELL DIVISION PROTEIN BACILLUS SUBTILIS  76-110 FTSAPFTSA_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  301-338  375-418FTSA PFTSJ_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI   4-31 FTSJPFTSL_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  63-90 FTSLPFTSN_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  151-188 FTSNPFTSX_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  278-305 FTSXPFTSY_ECOLI CELL DIVISION PROTEIN ESCHERICHIA COLI  230-260 FTSYPFUCR_ECOLI L-FUCOSE OPERON ESCHERICHIA COLI   7-45 ACTIVATORPFUMA_BACST FUMARATE HYDRATASE BACILLUS STEAROTHERMOPHILUS  290-317CLASS I, AEROBIC PFUMH_BACSU FUMARATE HYDRATASE BACILLUS SUBTILIS 414-445 PFUR_YERPE FERRIC UPTAKE REGULA- YERSINIA PESTIS  99-130 TIONPROTEIN PG3P1_ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI  302-329GENASE A PG3P2_ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS  87-114GENASE 2 PG3P3_ANAVA GLYC 3-PHOS DEHYDRO- ANABAENA VARIABILIS  162-189GENASE 3 PG3P3_ECOLI GLYC 3-PHOS DEHYDRO- ESCHERICHIA COLI  236-324GENASE C PG3P_BACME GLYC 3-PHOS DEHYDRO- BACILLUS MEGATERIUM  49-76 237-271 GENASE PG3P_BACSU GLYC 3-PHOS DEHYDRO- BACILLUS SUBTILIS  49-76GENASE PG3P_PYRWO GLYC 3-PHOS DEHYDRO- PYROCOCCUS WOESEI  259-286 GENASEPG3P_THEMA GLYC 3-PHOS DEHYDRO- THERMOTOGA MARITIMA  290-328 GENASEPG6PB_BACST GLUCOSE-6-PHOSPHATE BACILLUS STEAROTHERMOPHILUS  103-143 241-268 ISOMERASE B PG6PD_ECOLI GLUCOSE-6-PHOSPHATE ESCHERICHIA COLI 301-328 1-DEHYDROGENASE PG6PD_ZYMMO GLUCOSE-6-PHOSPHATE ZYMOMONASMOBILIS  165-192 1-DEHYDROGENASE PGACA_PSEFL CYANIDE CONTROL PROTEINPSEUDOMONAS FLUORESCENS  178-205 PGAL1_SALTY GALACTOKINASE SALMONELLATYPHIMURIUM  86-113 PGAL7_HAEIN GAL-1-PHOS URIDYLYL- HAEMOPHILUSINFLUENZAE  124-158  239-269 TRANSFERASE PGAL7_LACHE GAL-1-PHOSURIDYLYL- LACTOBACILLUS HELVETICUS  304-338 TRANSFERASE PGALF_SALTYGALACTOSE OPERON SALMONELLA TYPHIMURIUM  53-91 REPRESSOR PGALR_HAEINGALACTOSE OPERON HAEMOPHILUS INFLUENZAE  182-209 REPRESSOR PGAL_PSEFL DED-GALACTOSE 1- PSEUDOMONAS FLUORESCENS  251-278 DEHYDROGENASEPGCH2_ECOLI GTP CYCLOHYDROLASE II ESCHERICHIA COLI  78-105 PGCH2_PHOLEGTP CYCLOHYDROLASE II PHOTOBACTERIUM LEIOGNATHI  197-227  246-273PGCSH_ECOLI GLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI  10-37 H PROTEINPGCSP_ECOLI GLYCINE DEHYDROGENASE ESCHERICHIA COLI  216-246 PGCVA_ECOLIGLYCINE CLEAVAGE SYSTEM ESCHERICHIA COLI  60-94 TRANSACTIVATORPGENK_ECOLI PROTEIN K ESCHERICHIA COLI  24-51 PGER1_BACSU SPOREGERMINATION BACILLUS SUBTILIS  49-83  182-216  350-384 PROTEIN IPGER3_BACSU SPORE GERMINATION BACILLUS SUBTILIS  293-323 PROTEIN IIIPRECURSOR PGERE_BACSU GERMINATION PROTEIN BACILLUS SUBTILIS  13-40 GEREPGGI2_STAHA ANTIBACTERIAL PROTEIN 2 STAPHYLOCOCCUS HAEMO-   6-33 LYTICUSPGGI3_STAHA ANTIBACTERIAL PROTEIN 3 STAPHYLOCOCCUS HAEMO-   6-33 LYTICUSPGIDA_BACSU GLUCOSE INHIBITED BACILLUS SUBTILIS  396-423 DIVISIONPROTEIN A PGIDA_ECOLI GLUCOSE INHIBITED ESCHERICHIA COLI  533-568DIVISION PROTEIN A PGIDA_PSEPU GLUCOSE INHIBITED PSEUDOMONAS PUTIDA 539-566 DIVISION PROTEIN A PGIDB_BACSU GLUCOSE INHIBITED BACILLUSSUBTILIS  34-61 DIVISION PROTEIN B PGIDB_PSEPU GLUCOSE INHIBITEDPSEUDOMONAS PUTIDA  25-52 DIVISION PROTEIN B PGLCP_SYNY3 GLUCOSETRANSPORT SYNECHOCYSTIS SP  288-322 PROTEIN PGLDA_BACST GLYCEROLDEHYDRO- BACILLUS STEAROTHERMOPHILUS  20-79 GENASE PGLGA_ECOLI GLYCOGENSYNTHASE ESCHERICHIA COLI  256-283 PGLGC_ECOLI GLUCOSE-1-PHOSPHATEESCHERICHIA COLI  114-141 ADENYLYLTRANSFERASE PGLGC_SALTYGLUCOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM  114-141 ADENYLYLTRANSFERASEPGLMS_ECOLI GLUC--FRUC-6-PHOSAMINO- ESCHERICHIA COLI  209-243TRANSFERASE PGLN1_METTL GLNB-LIKE PROTEIN 1 METHANOCOCCUS  58-85THERMOLITHOTROPHICUS PGLNA_ANASP GLUTAMINE SYNTHETASE ANABAENA SP   8-42PGLNA_BACSU GLUTAMINE SYNTHETASE BACILLUS SUBTILIS   4-31 PGLNA_CLOABGLUTAMINE SYNTHETASE CLOSTRIDIUM ACETOBUTYLICUM  413-440 PGLNA_ECOLIGLUTAMINE SYNTHETASE ESCHERICHIA COLI  144-171 PGLNA_METVO GLUTAMINESYNTHETASE METHANOCOCCUS VOLTAE  203-230 PGLNA_PROVU GLUTAMINESYNTHETASE PROTEUS VOLGARIS  142-169 PGLNA_PYRFU GLUTAMINE SYNTHETASEPYROCOCCUS FURIOSUS  391-421 PGLNA_SALTY GLUTAMINE SYNTHETASE SALMONELLATYPHIMURIUM  144-171 PGLNA_STRCO GLUTAMINE SYNTHETASE STREPTOMYCESCOELICOLOR  186-213 PGLNB_AZOBR NITROGEN REGULATORY AZOSPIRILLUMBRASILENSE  15-49 PROTEIN P-II PGLNB_RHOCA NITROGEN REGULATORYRHODOBACTER CAPSULATUS  15-49 PROTEIN P-II PGLNB_SYNP6 NITROGENREGULATORY SYNECHOCOCCUS SP  52-79 PROTEIN P-II PGLND_ECOLI UDPURIDYLYLTRANSFERASE ESCHERICHIA COLI  120-147  151-178 PGLND_SALTY UDPURIDYLYLTRANSFERASE SALMONELLA TYPHIMURIUM  151-178 PGLNE_ECOLIADENYLYLTRANSFERASE ESCHERICHIA COLI  103-130  433-460  763-790PGLNH_ECOLI GLUTAMINE-BINDING ESCHERICHIA COLI  126-153 PROTEINPRECURSOR PGLNQ_BACST GLUTAMINE PERMEASE BACILLUS STEAROTHERMOPHILUS  7-34 OPERON PROTEIN GLNQ PGLPD_BACSU AEROBIC GLYC-3-PHOS BACILLUSSUBTILIS  194-230 DEHYDROGENASE PGLPD_ECOLI AEROBIC GLYC-3-PHOSESCHERICHIA COLI  410-437 DEHYDROGENASE PGLPF_BACSU GLYCEROL UPTAKEFACILI- BACILLUS SUBTILIS  235-274 TATOR PROTEIN PGLPK_BACSU GLYCEROLKINASE BACILLUS SUBTILIS  44-93 PGLPK_ECOLI GLYCEROL KINASE ESCHERICHIACOLI  56-90 PGLPR_ECOLI GLYCEROL-3-PHOSPHATE ESCHERICHIA COLI   5-32REGULON REPRESSOR PGLPX_ECOLI GLPX PROTEIN ESCHERICHIA COLI  297-324PGLPX_SHIFL GLPX PROTEIN SHIGELLA FLEXNERI  297-324 PGLRX_ECOLIGLUTAREDOXIN ESCHERICHIA COLI  24-51 PGLTB_ECOLI GLUTAMATE SYNTHASEESCHERICHIA COLI  482-509 PGLTP_ECOLI PROTON GLUTAMATE ESCHERICHIA COLI 319-346 SYMPORT PROTEIN PGLVB_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI 130-157 ENZYME TYPE-IIB PGLYA_BRAJA SERINE HYDROXYMETHYL-BRADYRHIZOBIUM JAPONICUM  29-60 TRANSFERASE PGLYA_CAMJE SERINEHYDROXYMETHYL- CAMPYLOBACTER JEJUNI  376-403 TRANSFERASE PGLYA_HYPMESERINE HYDROXYMETHYL- HYPHOMICROBIUM METHYL-  28-55 TRANSFERASE OVORUMPGMG7_BACSU COMG OPERON PROTEIN 7 BACILLUS SUBTILIS  37-67  88-122PGNTK_BACSU GLUCONOKINASE BACILLUS SUBTILIS  238-271 PGP1D_CHLTRVIRULENCE PROTEIN PGP1-D CHLAMYDIA TRACHOMATIS  312-353 PGP2D_CHLTRVIRULENCE PROTEIN PGP2-D CHLAMYDIA TRACHOMATIS  97-131 PGP5D_CHLTRVIRULENCE PROTEIN PGP5-D CHLAMYDIA TRACHOMATIS  25-52 PGP6D_CHLTRVIRULENCE PROTEIN PGP6-D CHLAMYDIA TRACHOMATIS  63-106  193-220PGP7D_CHLTR VIRULENCE PROTEIN PGP7-D CHLAMYDIA TRACHOMATIS  12-60PGP8D_CHLTR VIRULENCE PROTEIN PGP8-D CHLAMYDIA TRACHOMATIS  94-121PGREA_RICPR TRANSCRIPTION ELONGA- RICKETTSIA PROWAZEKII  15-49 TIONFACTOR GREA PGRPE_BACSU GRPE-LIKE PROTEIN BACILLUS SUBTILIS  27-73PGRPE_BORBU GRPE-LIKE PROTEIN BORRELIA BURGDORFERI   2-79 PGRPE_CLOABGRPE-LIKE PROTEIN CLOSTRIDIUM ACETOBUTYLICUM  12-83 PGRSA_BACBRGRAMICIDIN S SYNTHETASE BACILLUS BREVIS  545-572  799-826  840-8821035-1062 PGRSB_BACBR GRAMICIDIN S SYNTHETASE BACILLUS BREVIS  48-75 94-121  241-282 1126-1153 1213-1240 2162-2189 2559-2586 2819-28463606-3633 II PGSH1_ECOLI GLUTAMATE-CYSTEINE ESCHERICHIA COLI  239-266 274-301 LIGASE PGSHR_ECOLI GLUTATHIONE REDUCTASE ESCHERICHIA COLI 100-134  270-311 PGSHR_PSEAE GLUTATHIONE REDUCTASE PSEUDOMONASAERUGINOSA  80-114 PGSIA_BACSU STARVATION-INDUCIBLE BACILLUS SUBTILIS 74-101  265-296 PROTEIN A PGSPD_ERWCA PROTEIN D PRECURSOR ERWINIACAROTOVORA  258-285  516-543  589-619 PGSPD_ERWCH PROTEIN D PRECURSORERWINIA CHRYSANTHEMI  259-302  307-338  551-578  659-686 PGSPD_KLEPNPROTEIN D PRECURSOR KLEBSIELLA PNEUMONIAE  259-286 PGSPE_ERWCA PROTEIN EERWINIA CAROTOVORA  329-367 PGSPE_ERWCH PROTEIN E ERWINIA CHRYSANTHEMI 329-367 PGSPE_KLEPN PROTEIN E KLEBSIELLA PNEUMONIAE  323-361PGSPE_PSEAE PROTEIN E PSEUDOMONAS AERUGINOSA  122-149  331-369PGSPF_XANCP PROTEIN F XANTHOMONAS CAMPESTRIS  230-257 PGSPH_PSEAEPROTEIN H PRECURSOR PSEUDOMONAS AERUGINOSA  18-59 PGSPI_AERHY PROTEIN IPRECURSOR AEROMONAS HYDROPHILA  27-61 PGSPI_ERWCA PROTEIN I PRECURSORERWINIA CAROTOVORA  35-62 PGSPJ_KLEPN PROTEIN J PRECURSOR KLEBSIELLAPNEUMONIAE  140-167 PGSPK_ERWCA PROTEIN K ERWINIA CAROTOVORA  28-55PGSPK_ERWCH PROTEIN K ERWINIA CHRYSANTHEMI  28-55 PGSPK_KLEPN PROTEIN KKLEBSIELLA PNEUMONIAE  72-99 PGSPK_PSEAE PROTEIN K PSEUDOMONASAERUGINOSA  262-289 PGSPL_ERWCH PROTEIN L ERWINIA CHRYSANTHEMI   7-42 248-286  331-358 PGSPL_XANCP PROTEIN L XANTHOMONAS CAMPESTRIS  39-73 297-324 PGSPM_ERWCA PROTEIN M ERWINIA CAROTOVORA  108-145 PGSQD_ERWCHPROTEIN D PRECURSOR ERWINIA CHRYSANTHEMI  259-302  448-475  546-573 657-684 PGTF1_STRDO GLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI  42-69 177-204  212-239  464-491 1382-1416 1495-1529 PRECURSOR PGTF2_STRDOGLUCOSYLTRANSFERASE-I STREPTOCOCCUS DOWNEI  171-198  206-233  458-4851382-1412 1497-1524 PRECURSOR PGTFA_STRMU GLUCOSYLTRANSFERASE-SSTREPTOCOCCUS MUTANS  297-350 PGTFB_STRMU GLUCOSYLTRANSFERASE-ISTREPTOCOCCUS MUTANS  42-93  110-137  161-188  199-246  313-347  592-627PRECURSOR PGTFC_STRMU GLUCOSYLTRANSFERASE-SI STREPTOCOCCUS MUTANS   4-40 110-138  235-262  330-361  614-653 PRECURSOR PGTFS_STRDOGLUCOSYLTRANSFERASE-S STREPTOCOCCUS DOWNEI  275-316  436-463 1281-1315PRECURSOR PGTMR_METTF POSSIBLE G-T MISMATCHES METHANOBACTERIUM  80-107 148-175 REPAIR ENZYME THERMOFORMICICUM PGUAA_BACSU GMP SYNTHASEBACILLUS SUBTILIS  314-348  399-436  478-505 PGUAA_ECOLI GMP SYNTHASEESCHERICHIA COLI  105-132 PGUB_BACCI BETA-GLUCANASE BACILLUS CIRCULANS 164-191 PRECURSOR PGUB_BACLI BETA-GLUCANASE BACILLUS LICHENIFORMIS 132-166 PRECURSOR PGUB_BACMA BETA-GLUCANASE BACILLUS MACERANS  126-160PRECURSOR PGUN1_BACS4 ENDOGLUCANASE A BACILLUS SP  18-49 PGUN1_BACSUENDOGLUCANASE BACILLUS SUBTILIS  270-304  376-403 PRECURSOR PGUN1_BUTFIENDOGLUCANASE 1 BUTYRIVIBRIO FIBRISOLVENS  154-181  452-495 PGUN2_BACSUENDOGLUCANASE BACILLUS SUBTILIS  270-304 PRECURSOR PGUN2_THEFUENDOGLUCANASE E-2 THERMOMONOSPORA FUSCA  201-228 PRECURSOR PGUN3_BACS4ENDOGLUCANASE C BACILLUS SP  110-137  348-378  538-565 PRECURSORPGUN3_BACSU ENDOGLUCANASE BACILLUS SUBTILIS  270-304 PRECURSORPGUN3_FIBSU ENDOGLUCANASE 3 FIBROBACTER SUCCINOGENES  542-586 PRECURSORPGUN4_THEFU ENDOGLUCANASE E-4 THERMOMONOSPORA FUSCA  308-342 PRECURSORPGUN5_THEFU ENDOGLUCANASE E-5 THERMOMONOSPORA FUSCA  44-71 PRECURSORPGUNA_BACLA ENDOGLUCANASE A BACILLUS LAUTUS  410-437  454-481 PRECURSORPGUNA_CLOTM ENDOGLUCANASE A CLOSTRIDIUM THERMOCELLUM  354-384 PRECURSORPGUNA_PSEFL ENDOGLUCANASE A PSEUDOMONAS FLUORESCENS  762-789 PRECURSORPGUNA_RUMAL ENDOGLUCANASE A RUMINOCOCCUS ALBUS  294-321 PGUNA_RUMFLCELLODEXTRINASE A RUMINOCOCCUS FLAVEFACIENS  276-303 PGUNB_BACLAENDOGLUCANASE B BACILLUS LAUTUS  375-450 PRECURSOR PGUNB_CALSAENDOGLUCANASE B CALDOCELLUM SACCHAROLYTI-  151-182  444-478 CUMPGUNB_CELFI ENDOGLUCANASE B CELLULOMONAS FIMI  266-293 PRECURSORPGUNB_CLOCL ENDOGLUCANASE B CLOSTRIDIUM CELLULOVORANS  144-171  266-300PRECURSOR PGUNB_CLOTM ENDOGLUCANASE B CLOSTRIDIUM THERMOCELLUM  514-541PRECURSOR PGUNC_CELFI ENDOGLUCANASE C CELLULOMONAS FIMI  881-908PRECURSOR PGUNC_PSEFL ENDOGLUCANASE C PSEUDOMONAS FLUORESCENS  52-82PRECURSOR PGUND_CLOCE ENDOGLUCANASE D CLOSTRIDIUM CELLULOLYTICUM 382-453 PRECURSOR PGUND_CLOCL ENDOGLUCANASE D CLOSTRIDIUMCELLULOLYTICUM  145-172  271-298 PRECURSOR PGUNE_CLOTM ENDOGLUCANASE ECLOSTRIDIUM THERMOCELLUM  158-185  207-234  284-311 PRECURSORPGUNH_CLOTM ENDOGLUCANASE H CLOSTRIDIUM THERMOCELLUM  46-73  425-452PRECURSOR PGUNS_ERWCA ENDOGLUCANASE ERWINIA CAROTOVORA  20-47  115-149PRECURSOR PGUNX_CLOTM PUTATIVE ENDOGLUCANASE CLOSTRIDIUM THERMOCELLUM 105-139 X PGUNZ_CLOSR ENDOGLUCANASE Z CLOSTRIDIUM STERCORARIUM  296-326 522-549 PRECURSOR PGUN_BACPO ENDOGLUCANASE BACILLUS POLYMYXA  198-225PGUN_BACS1 ENDOGLUCANASE BACILLUS SP  321-348 PRECURSOR PGUN_BACS6ENDOGLUCANASE BACILLUS SP  198-229  501-528  623-664 PRECURSORPGUTD_ECOLI SORBITOL-6-PHOSPHATE 2- ESCHERICHIA COLI  138-165DEHYDROGENASE PGVP1_HALHA GAS VESICLE PROTEIN, HALOBACTERIUM HALOBIUM 36-63 PLASMID PGVP2_HALHA GAS VESTILE PROTEIN, HALOBACTERIUM HALOBIUM 36-63 CHROMOSOMAL PGVPA_APHFL GAS VESICLE PROTEIN APHANIZOMENONFLOS-AQUAE   4-31  39-66 PGVPA_FREDI GAS VESICLE PROTEIN FREMYELLADIPLOSIPHON   4-31  39-66 PGVPA_HALME GAS VESICLE PROTEIN HALOBACTERIUMMEDITERRANEI  37-64 PGVPA_MICBC GAS VESICLE PROTEIN MICROCYSTIS SP 39-66 PGVPA_PSEAN GAS VESICLE PROTEIN PSEUDONANABAENA SP   4-31  39-66PGVPC_APHFL GAS VESICLE PROTEIN C APHANIZOMENON FLOS-AQUAE   8-49PGVPC_HALHA GAS VESICLE PROTEIN C HALOBACTERIUM HALOBIUM  150-249PGVPC_HALME GAS VESICLE PROTEIN C HALOBACTERIUM MEDITERRANEI  139-169PGVPD_HALHA GVPD PROTEIN, PLASMID HALOBACTERIUM HALOBIUM  110-147PGVPD_HALME GVPD PROTEIN HALOBACTERIUM MEDITERRANEI  110-147 PGVPF_HALHAGVPF PROTEIN, PLASMID HALOBACTERIUM HALOBIUM  13-47  135-169 PGVPF_HALMEGVPF PROTEIN HALOBACTERIUM MEDITERRANEI  13-47 PGVPF_HALSA GVPF PROTEINHALOBACTERIUM SALINARIUM   8-49 PGVPF_HALHA GVPG PROTEIN, PLASMIDHALOBACTERIUM HALOBIUM  38-65 PGVPG_HALME GVPG PROTEIN HALOBACTERIUMMEDITERRANEI  38-72 PGVPH_HALHA GVPH PROTEIN HALOBACTERIUM HALOBIUM 10-40 PGVPI_HALME GVPI PROTEIN HALOBACTERIUM MEDITERRANEI   5-32PGVPK_HALHA GVPK PROTEIN HALOBACTERIUM HALOBIUM  45-76 PGVPK_HALME GVPKPROTEIN HALOBACTERIUM MEDITERRANEI  12-39  47-74 PGVPK_HALSA GVPKPROTEIN HALOBACTERIUM SALINARIUM  11-38  50-77 PGVPL_HALME GVPL PROTEINHALOBACTERIUM MEDITERRANEI  44-78 PGVPN_HALHA GVPN PROTEIN HALOBACTERIUMHALOBIUM  113-140 PGVPN_HALME GVPN PROTEIN HALOBACTERIUM MEDITERRANEI 15-56 PGVPO_HALME GVPO PROTEIN HALOBACTERIUM MEDITERRANEI  69-96 105-132 PGYRA_BACSU DNA GYRASE SUBUNIT A BACILLUS SUBTILIS  380-407 429-499 PGYRA_CAMJE DNA GYRASE SUBUNIT A CAMPYLOBACTER JEJUNI  267-310 381-408  452-479  665-695 PGYRA_ECOLI DNA GYRASE SUBUNIT A ESCHERICHIACOLI  266-293  449-497 PGYRA_KLEPN DNA GYRASE SUBUNIT A KLEBSIELLAPNEUMONIAE  266-293  448-496  518-545 PGYRA_MYCPN DNA GYRASE SUBUNIT AMYCOPLASMA PNEUMONIAE   4-31 PGYRA_STAAU DNA GYRASE SUBUNIT ASTAPHYLOCOCCUS AUREUS  129-156  346-373  430-479  647-674  812-839PGYRB_BACSU DNA GYRASE SUBUNIT B BACILLUS SUBTILIS  198-239 PGYRB_BORBUDNA GYRASE SUBUNIT B BORRELIA BURGDORFERI  154-181 PGYRB_ECOLI DNAGYRASE SUBUNIT B ESCHERICHIA COLI  616-643 PGYRB_HALSQ DNA GYRASESUBUNIT B HALOFERAX SP  230-257 PGYRB_MYCPN DNA GYRASE SUBUNIT BMYCOPLASMA PNEUMONIAE  249-283 PGYRB_NEIGO DNA GYRASE SUBUNIT BNEISSERIA GONORRHOEAE  524-558  618-645 PGYRB_PSEPU DNA GYRASE SUBUNIT BPSEUDOMONAS PUTIDA  122-149  684-711 PGYRB_SPICI DNA GYRASE SUBUNIT BSPIROPLASMA CITRI  40-74  189-238  283-310  341-368  540-579 PGYRB_STAAUDNA GYRASE SUBUNIT B STAPHYLOCOCCUS AUREUS  252-279  291-318 PHDHA_ECOLI7-ALPHA-HYDROXYSTEROID ESCHERICHIA COLI  71-98 DEHYDROGENASE PHELD_ECOLIHELICASE IV ESCHERICHIA COLI  100-134  529-556 PHEL_HAEIN LIPROPROTEIN EPRECURSOR HAEMOPHILUS INFLUENZAE  58-85 PHEM1_CHLVI GLUTAMYL-TRNACHLOROBIUM VIBRIOFORMES  232-259 REDUCTASE PHEM1_ECOLI GLUTAMYL-TRNAESCHERICHIA COLI  289-316 REDUCTASE PHEM1_RHOSH 5-AMINOLEVULINIC ACIDRHODOBACTER SPHAEROIDES  73-100 SYNTHASE PHEM1_SALTY GLUTAMYL-TRNASALMONELLA TYPHIMURIUM  289-316  344-371 REDUCTASE( PHEM1_SYNY3GLUTAMYL-TRNA SYNECHOCYSTIS SP  163-190  350-377 REDUCTASE PHEM2_METSCDELTA-AMINOLEVULINIC METHANOTHERMUS SOCIABILIS  131-158 ACID DEHYDRATASEPHEM4_BACSU PUTATIVE UROPORPHYRINO- BACILLUS SUBTILIS  10-37 GEN-IIISYNTHASE PHEM4_ECOLI UROPORPHYRINOGEN-III ESCHERICHIA COLI  211-238SYNTHASE PHEMM_ECOLI HEMM PROTEIN ESCHERICHIA COLI  147-174 PHEMR_YERENHEMIN RECEPTOR YERSINIA ENTEROCOLITICA  234-261 PRECURSOR PHEMX_ECOLIPUTATIVE METHYL- ESCHERICHIA COLI  69-138  185-219 TRANSFERASEPHEMY_BACSU HEMY PROTEIN BACILLUS SUBTILIS  217-262 PHEMZ_BACSUFERROCHELATASE BACILLUS SUBTILIS  199-226 PHETA_ANASP HETEROCYSTDIFFERENTIA- ANABAENA SP  184-211  357-398  521-565 TION PROTEINPHEXA_STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE  426-460PROTEIN HEXA PHEXB_STRPN DNA MISMATCH REPAIR STREPTOCOCCUS PNEUMONIAE 470-497 PROTEIN HEXB PHFAB_CAUCR POS TRANSACTIVATOR CAULOBACTERCRESCENTUS  98-125 PROTEIN HFAB PHFLC_ECOLI HFLC PROTEIN ESCHERICHIACOLI  113-140 PHFLX_ECOLI GTP-BINDING PROTEIN HFLX ESCHERICHIA COLI 169-196 PHFQ_ECOLI HOST FACTOR-1 PROTEIN ESCHERICHIA COLI  24-51PHIFC_HAEIN PILIATION PROTEIN HIFC HAEMOPHILUS INFLUENZAE  356-383 404-431  447-474 PRECURSOR PHIS2_LACLA PHOSPHORIBOSYL-AMP LACTOCOCCUSLACTIS  126-174 CYCLOHYDROLASE PHIS4_ECOLI P-5-A CARBOXAMIDE ESCHERICHIACOLI  125-159 RIBOTIDE PHIS4_LACLA P-5-A CARBOXAMIDE LACTOCOCCUS LACTIS 49-89  181-228 RIBOTIDE PHIS4_METVA P-5-A CARBOXAMIDE METHANOCOCCUSVANNIELII  115-142 RIBOTIDE PHIS4_SALTY P-5-A CARBOXAMIDE SALMONELLATYPHIMURIUM  125-159 RIBOTIDE PHIS5_LACLA AMIDOTRANSFERASE HISHLACTOCOCCUS LACTIS   7-34 PHIS6_ECOLI HISF PROTEIN ESCHERICHIA COLI 39-66  142-169 PHIS6_SALTY HISF PROTEIN SALMONELLA TYPHIMURIUM  39-66 142-169 PHIS7_ECOLI IMIDAZOLEGLYCEROL- ESCHERICHIA COLI  168-199PHOSPHATE DEHYDRATASE PHIS7_SALTY IMIDAZOLEGLYCEROL- SALMONELLATYPHIMURIUM  161-199 PHOSPHATE DEHYDRATASE PHIS8_ECOLIHISTIDINOL-PHOSPHATE ESCHERICHIA COLI  290-317 AMINOTRANSFERASEPHIS8_HALVO HISTIDINOL-PHOSPHATE HALOBACTERIUM VOLCANII  174-201AMINOTRANSFERASE PHIS8_LACLA HISTIDINOL-PHOSPHATE LACTOCOCCUS LACTIS 161-188 AMINOTRANSFERASE PHIS8_SALTY HISTIDINOL-PHOSPHATE SALMONELLATYPHIMURIUM  293-320 AMINOTRANSFERASE PHISQ_SALTY HISTIDINE PERMEASESALMONELLA TYPHIMURIUM   8-35 MEMBRANE Q PROTEIN PHISX_ECOLI HISTIDINOLDEHYDRO- ESCHERICHIA COLI  393-434 GENASE PHISX_LACLA HISTIDINOLDEHYDRO- LACTOCOCCUS LACTIS  19-46  264-303 GENASE PHISX_MYCSMHISTIDINOL DEHYDRO- MYCOBACTERIUM SMEGMATIS  288-329  399-430 GENASEPHISX_SALTY HISTIDINOL DEHYDRO- SALMONELLA TYPHIMURIUM  393-434 GENASEPHLA_STAAU ALPHA-HEMOLYSIN STAPHYLOCOCCUS AUREUS  69-103 PRECURSORPHLY1_ECOLI HEMOLYSIN A, CHROMO- ESCHERICHIA COLI   5-32  76-103 161-224  234-261  353-380  458-492  554-581  642-728 SOMAL PHYL2_ECOLIHAEMOLYSIN SECRETION ESCHERICHIA COLI  487-514 PROTEIN, CHROMOSOMAPHLY4_ECOLI HEMOLYSIN D, CHROMO- ESCHERICHIA COLI  103-133  178-215 223-331 SOMAL PHLYA_ACTPL HEMOLYSIN ACTINOBACILLUS PLEURO-   5-39 136-170  184-218  273-300  350-377  459-527  846-924 PNEUMONIAEPHLYA_ACTSU HEMOLYSIN ACTINOBACILLUS SUIS   5-39  136-170  184-218 273-300  350-377  459-527  846-924 PHLYA_ECOLI HEMOLYSIN A, PLASMIDESCHERICHIA COLI   5-32  76-103  161-262  354-381  452-493  555-582 643-729 PHLYA_PROMI HEMOLYSIN PRECURSOR PROTEUS MIRABILIS  165-196 299-338  356-400  425-471  498-525  528-576  610-695  705-742  747-774 789-823  841-868  966-993 1113-1140 1166-1193 1225-1273 1301-13421391-1461 1483-1527 PHLYA_SERMA HEMOLYSIN PRECURSOR SERRATIA MARCESCENS 311-345  477-504  558-585  625-703  718-745  830-864 1081-11081155-1202 1249-1286 1516-1553 PHLYA_VIBCH HEMOLYSIN PRECURSOR VIBRIOCHOLERAE  335-369  638-665 PHLYB_ACTPL HAEMOLYSIN SECRETIONACTINOBACILLUS PLEURO-  34-61 PROTEIN PNEUMONIAE PHLYB_ECOLI HAEMOLYSINSECRETION ESCHERICHIA COLI  487-514 PROTEIN, PLASMID PHLYB_PROMIHEMOLYSIN ACTIVATOR PROTEUS MIRABILIS  16-64  499-547 PROTEIN PRECURSORPHLYB_PROVU HAEMOLYSIN SECRETION PROTEUS VULGARIS  34-68  487-514PROTEIN PHLYB_SERMA HEMOLYSIN ACTIVATOR SERRATIA MARCESCENS  110-137PROTEIN PRECURSOR PHLYB_VIBCH HEMOLYSIN SECRETION VIBRIO CHOLERAE 335-398  413-447  458-524 PROTEIN PRECURSOR PHLYC_ACTPL HEMOLYSIN CACTINOBACILLUS PLEURO-  130-157 PNEUMONIAE PHLYD_ACTPL HEMOLYSINSECRETION ACTINOBACILLUS PLEURO-  191-331 PROTEIN APPD PNEUMONIAEPHLYD_ECOLI HEMOLYSIN D, PLASMID ESCHERICHIA COLI  103-133  178-215 223-331 PHLY_HALI7 HALOLYSIN PRECURSOR HALOPHILIC BACTERIA  484-516STRAIN 172P1 PHMC3_DESVH 43.2 KD PROTEIN IN HMC DESULFOBIVRIO VULGARIS 156-186 OPERON PHMD_METKA H(2)-FORMING DEHYDRO- METHANOPYRUS KANDLERI 36-63 GENASE PHNS_SERMA DNA-BINDING PROTEIN H-NS SERRATIA MARCESCENS 35-62 PHOLA_ECOLI DNA POLYMERASE III, DELTA ESCHERICHIA COLI  94-121 288-322 SUBUNIT PHOXA_BRAJA REG PROTEIN HOXA BRADYRHIZOBIUM JAPONICUM 113-163  444-471 PHOXF_NOCOP HOXS ALPHA SUBUNIT NOCARDIA OPACA   4-31PHOXQ_ALCEU HOXQ PROTEIN ALCALIGENES EUTROPHUS  76-110 PHOXX_BRAJA HOXXPROTEIN BRADYRHIZOBIUM JAPONICUM  356-383 PHPI_DEIRA HEXAGONALLY SURFACEDEINOCCCUS RADIODURANS  585-612 PROTEIN PRECURSOR PHPRT_LACLAPHOSPHORIBOSYL- LACTOCOCCUS LACTIS   3-39  71-105 TRANSFERASEPHRDD_STRCO SIGMA FACTOR HRDD STREPTOMYCES COELICOLOR  296-323PHRPB_BURSO REGULATORY PROTEIN HRPB BURKHOLDERIA SOLANACEARUM  371-405PHRPH_PSESY OUTER MEMBRANE PROTEIN PSEUDOMONAS SYRINGAE  102-129 310-344 HRPH PRECURSOR PHRPS_PSESH PROBABLE REGULATORY PSEUDOMONASSYRINGAE  24-51 PROTEIN HRPS PHS18_CLOAB 18 KB HEAT SHOCK PROTEINCLOSTRIDIUM ACETOBUTYLICUM  67-108 PHS70_HALMA HEAT SHOCK 70 KD PROTEINHALOARCULA MARISMORTUI  522-576 PHS70_MYCLE HEAT SHOCK 70 KD PROTEINMYCOBACTERIUM LEPRAE  461-488  503-530 PHS70_MYCPA HEAT SHOCK 70 KDPROTEIN MYCOBACTERIUM PARA-  460-487 TUBERCULOSIS PHTPG_ECOLI HEAT SHOCKPROTEIN C62.5 ESCHERICHIA COLI  221-248  482-509 PHTRA_ECOLI PROTEASE DOPRECURSOR ESCHERICHIA COLI  373-400 PHTRE_ECOLI HTRE PROTEIN PRECURSORESCHERICHIA COLI  454-484  524-576 PHTRJ_HALHA SENSORY RHODOPSIN IHALOBACTERIUM HALOBIUM  413-471  479-506 TRANSDUCER PHTRJ_HALSA SENSORYRHODOPSIN I HALOBACTERIUM SALINARIUM  114-159  413-471  479-506TRANSDUCER PHUTP_BACSU HUT OPERON POSITIVE BACILLUS SUBTILIS   5-36REGULATORY PROTEIN PHVTJ_LACHE HELVETICIN J LACTOBACILLUS HELVETICUS 174-212  306-333 PHYCA_ECOLI FORMATE HYDROGENYLASE ESCHERICHIA COLI 73-100  106-133 SUBUNIT 1 PHYDG_ECOLI TRANSCRIPTIONAL REGULA-ESCHERICHIA COLI  251-278 TORY PROTEIN HYDG PHYDG_SALTY TRANSCRIPTIONALREGULA- SALMONELLA TYPHIMURIUM  251-278 TORY PROTEIN HYDG PHYDH_ECOLISENSOR PROTEIN HYDH ESCHERICHIA COLI  312-339  360-387 PHYUB_PSESNHYDANTOIN UTILIZATION PSEUDOMONAS SP  554-581 PROTEIN B PHYUC_PSESNHYDANTOIN UTILIZATION PSEUDOMONAS SP   6-40  96-123 PROTEIN PIAAL_PSESSINDOLEACETATE-LYSINE PSEUDOMONAS SYRINGAE  133-160  297-331 LIGASEPIAP_ECOLI ALK PHOS ISOZYME CONVER- ESCHERICHIA COLI  74-101 SIONPROTEIN PICEN_ERWAN ICE NUCLEATION PROTEIN ERWINIA ANANAS  326-353 422-449  534-561  614-641  662-689  721-748  758-785  854-881  950-9771046-1073 PICEN_ERWHE ICE NUCLEATION PROTEIN ERWINIA HERBICOLA  310-337 406-433  534-561  646-673  694-721  838-865  886-913  982-1009PICEN_PSEFL ICE NUCLEATION PROTEIN PSEUDOMONAS FLUORESCENS  281-308 377-404  425-452  681-708  729-781  795-852 PICEN_PSESY ICE NUCLEATIONPROTEIN PSEUDOMONAS SYRINGAE  564-602  772-847  868-895  909-943PICEN_XANCT ICE NUCLEATION PROTEIN XANTHOMONAS CAMPESTRIS  496-534 555-582 1168-1204 1248-1275 PICSB_SHIFL INTERCELLULAR SPREAD SHIGELLAFLEXNERI  41-105  438-467 PROTEIN PIF2_BACST INITIATION FACTOR IF-2BACILLUS STEAROTHERMOPHILUS  540-567  681-708 PIF2_BACSU INITIATIONFACTOR IF-2 BACILLUS SUBTILIS  173-208  394-421 PIF2_ECOLI INITIATIONFACTOR IF-2 ESCHERICHIA COLI  686-724  835-862 PIF2_ENTFC INITIATIONFACTOR IF-2 ENTEROCOCCUS FAECIUM  579-627 PIF3_BACST INITIATION FACTORIF-3 BACILLUS STEAROTHERMOPHILUS   7-34 PIF3_ECOLI INITIATION FACTORIF-3 ESCHERICHIA COLI  27-54  70-97 PIF3_KLEPN INITIATION FACTOR IF-3KLEBSIELLA PNEUMONIAE  27-54  70-97 PIF3_MYCFE INITIATION FACTOR IF-3MYCOPLASMA FERMENTANS  177-211 PIF3_PROVU INITIATION FACTOR IF-3 PROTEUSVULGARIS   2-29  70-97 PIF3_SALTY INITIATION FACTOR IF-3 SALMONELLATYPHIMURIUM  27-54  70-97 PIF3_SERMA INITIATION FACTOR IF-3 SERRATIAMARCESCENS  19-46  70-97 PIGA_NEIGO IGA-SPECIFIC SERINE NEISSERIAGONORRHOEAE  245-272  287-314  833-860 1024-1058 1377-1404 1483-1531ENDOPEPTIDASE PIGGB_STRSP IGG BINDING PROTEIN STREPTOCOCCUS SP  46-76 120-150  195-222 PRECURSOR PIGGG_STRSP IGG BINDING PROTEINSTREPTOCOCCUS SP  46-76  120-150  195-225  270-297 PRECURSOR PILVH_ECOLIACETOLACTATE SYNTHASE ESCHERICHIA COLI  47-81  120-147 PILVH_SALTYACETOLACTATE SYNTHASE SALMONELLA TYPHIMURIUM  47-81  120-147 PILVN_LACLAACETOLACTATE SYNTHASE LACTOCOCCUS LACTIS  20-75 PIMPB_SALTY IMPB PROTEINSALMONELLA TYPHIMURIUM  185-212 PIMP_ACICA INOSINE-5′-MONOPHOSPHATEACINETOBACTER CALCOACETICUS  166-193 DEHYDROGENASE PIMP_BACSUE-5′-MONOPHOSPHATE BACILLUS SUBTILIS  159-186 DEHYDROGENASE PINA_BACTLIMMUNE INHIBITOR A BACILLUS THURINGIENSIS  103-130  324-358 PRECURSORPINLA_LISMO INTERNALIN A LISTERIA MONOCYTOGENES  106-143  161-188 196-232 PINLB_LISMO INTERNALIN B PRECURSOR LISTERIA MONOCYTOGENES 53-94  166-200  385-415 PINVA_YEREN INVASIN YERSINIA ENTEROCOLITICA 501-535 PIPA7_SHIFL 60 KD ANTIGEN SHIGELLA FLEXNERI  285-312PIPAA_SHIFL 70 KD ANTIGEN SHIGELLA FLEXNERI  95-136  437-475  493-557 596-630 PIPAB_SHIDY 62 KD MEMBRANE ANTIGEN SHIGELLA DYSENTERIAE  28-55 71-169  480-507  522-556 PIPAB_SHIFL 62 KD MEMBRANE ANTIGEN SHIGELLAFLEXNERI  28-55  71-169  480-507  522-556 PIPAC_SHIDY 42 KD MEMBRANEANTIGEN SHIGELLA DYSENTERIAE  21-57  113-161  273-300  324-378 PRECURSORPIPAC_SHIFL 42 KD MEMBRANE ANTIGEN SHIGELLA FLEXNERI  28-57  113-161 273-300  324-372 PRECURSOR PIPAD_SHIDY 37 KD MEMBRANE ANTIGEN SHIGELLADYSENTERIAE  47-86  291-318 IPAD PIPAD_SHIFL 36 KD MEMBRANE ANTIGENSHIGELLA FLEXNERI  47-86  259-286  291-318 PIPGB_SHIDY IPGB PROTEINSHIGELLA DYSENTERIAE  175-202 PIPGB_SHIFL IPGB PROTEIN SHIGELLA FLEXNERI 175-202 PIPT_PSESS ISOPENTENYL TRANSFERASE PSEUDOMONAS SYRINGAE  53-87 143-173 PIPYR_ECOLI INORGANIC PYROPHOSPHA- ESCHERICHIA COLI  138-172TASE PIRGA_VIBCH VIRULENCE PROTEIN VIBRIO CHOLERAE  212-239  336-377PRECURSOR PIRGB_VIBCH VIRULENCE REGULATORY VIBRIO CHOLERAE  67-97PROTEIN IRGB PIRPA_SYNP7 IRON-REGULATED PROTEIN A SYNECHOCOCCUS SP 167-194 PISBD_SHIDY INSERTION ELEMENT ISO- SHIGELLA DYSENTERIAE  86-113ISID PROTEIN INSB PISBN_SHIDY INSERTION ELEMENT ISO- SHIGELLADYSENTERIAE   6-37 ISIN PROTEIN INSB PISB_ECOLI INSERTION ELEMENT IS1ESCHERICHIA COLI  122-149 PROTEIN INSB PISB_SHIFL INSERTION ELEMENT IS1SHIGELLA FLEXNERI  86-113 PROTEIN INSB PISB_SHISO INSERTION ELEMENT IS1SHIGELLA SONNEI  86-113 PROTEIN INSB PISP1_BACSU MAJOR INTRACELLULARBACILLUS SUBTILIS  115-142  197-224  253-280 SERINE PROTEASE PISP_BACPOINTRACELLULAR SERINE BACILLUS POLYMYXA  109-143 PROTEASE PISTA_ECOLIISTA PROTEIN ESCHERICHIA COLI  183-210 PISTA_SHISO ISTA PROTEIN SHIGELLASONNEI  183-210 PIUTA_ECOLI FERRIC AEROBACTIN ESCHERICHIA COLI  186-213 525-552  559-593 RECEPTOR PRECURSOR PJAG_BACSU JAG PROTEIN BACILLUSSUBTILIS  68-95 PK6P2_ECOLI 6-PHOSPHOFRUCTOKINASE ESCHERICHIA COLI 143-170 ISOZYME 2 PKAD_BACSU ADENYLATE KINASE BACILLUS SUBTILIS 188-215 PKAD_LACLA ADENYLATE KINASE LACTOCOCCUS LACTIS  186-213PKANU_BACSP KANAMYCIN NUCLEOTIDYL- BACILLUS SP  69-96 TRANSFERASEPKANU_STAAU KANAMYCIN NUCLEOTIDYL- STAPHYLOCOCCUS AUREUS  69-96TRANSFERASE PKDGT_ECOLI 2-KETO-3-DEOXYGLUCONATE ESCHERICHIA COLI  70-97PERMEASE PKDGT_ERWCH 2-KETO-3-DEOXYGLUCONATE ERWINIA CHRYSANTHEMI 126-153 PERMEASE PKDTA_ECOLI 3-DEOXY-D-MANNO- ESCHERICHIA COLI  369-396OCTULOSONIC-ACID TRANS PKGTP_ECOLI ALPHA-KETOGLUTARATE ESCHERICHIA COLI  7-34 PERMEASE PKGUA_ECOLI GUANYLATE KINASE ESCHERICHIA COLI  162-189PKHSE_BACSU HOMOSERINE KINASE BACILLUS SUBTILIS  49-76 PKHSE_FREDIHOMOSERINE KINASE FREMYELLA DIPLOSIPHON  52-79 PKKA4_BACCIAMINOGLYCOSIDE 3′- BACILLUS CIRCULANS  12-39 PHOSPHOTRANSFERASEPKORB_ECOLI KORB TRANSCRIPTIONAL ESCHERICHIA COLI  228-255 REPRESSORPROTEIN PKPY1_SPICI PYRUVATE KINASE SPIROPLASMA CITRI  112-148PKPYK_BACST PYRUVATE KINASE BACILLUS STEAROTHERMOPHILUS  331-374PLACA_STAAU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS AUREUS   9-64PLACA_STRMU ISOMERASE LACA SUBUNIT STAPHYLOCOCCUS MUTANS  26-60PLACC_STRMU TAGATOSE-6-PHOSPHATE STAPHYLOCOCCUS MUTANS  56-83  283-310KINASE PLACG_LACCA 6-PHOSPHO-BETA-GALACTO- LACTOBACILLUS CASEI  290-317SIDASE PLACI_ECOLI LACTOSE OPERON ESCHERICHIA COLI   9-36 REPRESSORPLACI_KLEPN LACTOSE OPERON KLEBSIELLA PNEUMONIAE  195-229 REPRESSORPLACR_STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS   2-29 REPRESSORPLACR_STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS   2-32 REPRESSORPLACY_LACDE LACTOSE PERMEASE LACTOBACILLUS DELBRUECKII  196-230PLAFB_VIBPA FLAGELLAR HOOK- VIBRIO PARAHAEMOLYTICUS  62-89  388-415ASSOCIATED PROTEIN 2 PLAMB_KLEPN MALTOPORIN PRECURSOR KLEBSIELLAPNEUMONIAE  337-364 PLAMI_CLOTM ENDO-1,3(4)-BETA- CLOSTRIDIUMTHERMOCELLUM  132-159 GLUCANASE PRECURSOR PLASI_PSEAE OHHL SYNTHESISPROTEIN PSEUDOMONAS AERUGINOSA  171-198 LASI PLCCI_LEUGE PROBABLELEUCOCIN A LEUCONOSTOC GELIDUM  41-71 IMMUNITY PROTEIN PLCNC_LACLALACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS  162-189  207-234  388-433PROTEIN LCNC PLCND_LACLA LACTOCOCCIN A SECRETION LACTOCOCCUS LACTIS 99-126  140-202  237-307 PROTEIN LCND PLCRD_YEREN LOW CALCIUM RESPONSEYERSINIA ENTEROCOLITICA  122-149  491-518 LOCUS PROTEIN D PLCRD_YERPELOW CALCIUM RESPONSE YERSINIA PESTIS  122-149  491-518 LOCUS PROTEIN DPLCRV_YERPE VIRULENCE-ASSOCIATED V YERSINIA PESTIS  22-49  157-184 240-267 ANTIGEN PLCRV_YERPS VIRULENCE-ASSOCIATED V YERSINIAPSEUDOTUBERCULOSIS  22-49  240-267 ANTIGEN PLCTB_BACCA LCTB PROTEINBACILLUS CALDOTENAX  18-45 PLCTB_BACST LCTB PROTEIN BACILLUSSTEAROTHERMOPHILUS  14-45 PLDHD_LACPL D-LACTATE DEHYDRO- LACTOBACILLUSPLANTARUM  51-81 GENASE PLDHP_BACPS L-LACTATE DEHYDRO- BACILLUS PSYCHRO-  2-43  241-272  279-306 GENASE P SACCHAROLYTICUS PLDHX_BACPS L-LACTATEDEHYDRO- BACILLUS PSYCHRO-   2-43  241-275  279-306 GENASE XSACCHAROLYTICUS PLDH_BACME L-LACTATE DEHYDRO- BACILLUS MEGATERIUM 244-274 GENASE PLDH_BACST L-LACTATE DEHYDRO- BACILLUSSTEAROTHERMOPHILUS  241-268  279-313 GENASE PLDH_BACSU L-LACTATEDEHYDRO- BACILLUS SUBTILIS   8-42  240-267 GENASE PLDH_BIFLO L-LACTATEDEHYDRO- BIFIDOBACTERIUM LONGUM  22-49 GENASE PLDH_LACPL L-LACTATEDEHYDRO- LACTOBACILLUS PLANTARUM  197-231 GENASE PLDH_LISMO L-LACTATEDEHYDRO- LISTERIA MONOCYTOGENES  42-69 GENASE PLDH_MYCHY L-LACTATEDEHYDRO- MYCOPLASMA HYOPNEUMONIAE  276-310 GENASE PLDH_THEAQ L-LACTATEDEHYDRO- THERMUS AQUATICUS   3-30 GENASE PLEF_BACAN LETHAL FACTORPRECURSOR BACILLUS ANTHRACIS  165-192  304-331  480-514  548-578 619-658  737-764 PLEPA_PSEFL LEPA PROTEIN PSEUDOMONAS FLUORESCENS 23-50 PLEP_BACSU SIGNAL PEPTIDASE I BACILLUS SUBTILIS   3-30PLEU1_ECOLI 2-ISOPROPYLMALATE ESCHERICHIA COLI  437-464 SYNTHASEPLEU1_LACLA 2-ISOPROPYLMALATE LACTOCOCCUS LACTIS  22-49  379-484SYNTHASE PLEU3_BACCO 3-ISOPROPYLMALATE BACILLUS COAGULANS  331-358DEHYDROGENASE PLEU3_CLOPA 3-ISOPROPYLMALATE CLOSTRIDIUM PASTEURIANUM 185-212 DEHYDROGENASE PLEUD_LACLA 3-ISOPROPYLMALATE LACTOCOCCUS LACTIS 163-190 DEHYDRATASE PLEVR_BACSU TRANSCRIPTIONAL REGULA- BACILLUSSUBTILIS  297-324  676-703  744-774  785-822 TORY PROTEIN LEVRPLEXA_ERWCA LEXA REPRESSOR ERWINIA CAROTOVORA  146-173 PLIP1_MORSPLIPASE 1 MORAXELLA SP  26-53 PLIP2_MORSP LIPASE 2 MORAXELLA SP  356-383PLIPB_ECOLI LIPB PROTEIN ESCHERICHIA COLI  66-93 PLIP_BURCE LIPASEPRECURSOR BURKHOLDERIA CEPACIA  176-203 PLIP_PSEFL LIPASE PRECURSORPSEUDOMONAS FLUORESCENS   8-35 PLIP_PSES5 LIPASE PRECURSOR PSEUDOMONASSP  176-203 PLIP_STAAU LIPASE PRECURSOR STAPHYLOCOCCUS AUREUS  80-146 512-546 PLIVB_SALTY LEU/ILE/VAL/THR-BINDING SALMONELLA TYPHIMURIUM 193-220 PROTEIN PRECURSOR PLIVC_SALTY LEUCINE-SPECIFIC BINDINGSALMONELLA TYPHIMURIUM  195-222 PROTEIN PRECURSOR PLIVE_SALTY AMINO ACIDTRANSPORT SALMONELLA TYPHIMURIUM  121-148 PROTEIN LIVE PLIVF_ECOLI AMINOACID TRANSPORT ESCHERICHIA COLI  23-50 PROTEIN LIVF PLIVJ_CITFRLEU/ILE/VAL-BINDING CITROBACTER FREUNDII  195-222 PROTEIN PRECURSORPLIVJ_ECOLI LEU/ILE/VAL-BINDING ESCHERICHIA COLI  195-222 PROTEINPRECURSOR PLIVK_ECOLI LEUCINE-SPECIFIC BINDING ESCHERICHIA COLI  195-222PROTEIN PRECURSOR PLIVM_ECOLI AMINO ACID TRANSPORT ESCHERICHIA COLI 121-148 PROTEIN LIVM PLKTA_ACTAC LEUKOTOXIN ACTINOBACILLUS ACTINO- 113-147  173-213  398-443  451-488  593-620  655-711 MYCETEMCOMITANSPLKTA_PASHA LEUKOTOXIN PASTEURELLA HAEMOLYTICA  53-99  179-216  345-372 409-436  455-482  496-530  545-572  811-838  853-926 PLKTB_ACTACLEUKOTOXIN SECRETION ACTINOBACILLUS ACTINO-  487-514 PROTEINMYCETEMCOMITANS PLKTB_PASHA LEUKOTOXIN SECRETION PASTEURELLA HAEMOLYTICA 42-69  78-105  488-515 PROTEIN PLKTC_ACTAC LTC PROTEIN ACTINOBACILLUSACTINO-  58-85  116-150 MYCETEMCOMITANS PLKTC_PASHA LKTC PROTEINPASTEURELLA HAEMOLYTICA  123-157 PLKTD_ACTAC LKTD PROTEIN ACTINOBACILLUSACTINO-  116-164  205-242  278-305  364-391 MYCETEMCOMITANS PLKTD_PASHALKTD PROTEIN PASTEURELLA HAEMOLYTICA  184-289 PLON_ECOLI ATP-DEPENDENTPROTEASE ESCHERICHIA COLI  121-148 LA PLPXA_RICRI UDP-N-ACETYLGLUCO-RICKETTSIA RICKETTSII  229-256 SAMINE ACYLTRANSFERASE PLSPA_ECOLILIPOPROTEIN SIGNAL ESCHERICHIA COLI  10-37 PEPTIDASE PLSPA_STAAULIPOPROTEIN SIGNAL STAPHYLOCOCCUS AUREUS  134-161 PEPTIDASE PLUKF_STAAULEUKOCIDIN F SUBUNIT STAPHYLOCOCCUS AUREUS  161-195 PRECURSORPLUKS_STAAU LEUKOCIDIN S SUBUNIT STAPHYLOCOCCUS AUREUS  157-207PRECURSOR PLUXA_KRYAL ALKANAL MONOOXYGENASE KRYPTOPHANARON ALFREDI 190-217 ALPHA CHAIN PLUXB_PHOPO ALKANAL MONOOXYGENASE PHOTOBACTERIUM 188-217  257-291 BETA CHAIN PHOSPHOREUM PLUXB_VIBHA ALKANALMONOOXYGENASE VIBRIO HARVEYI  373-400 BETA CHAIN PLUXC_PHOLE ACYL-COAREDUCTASE PHOTOBACTERIUM LEIOGNATHI  44-81 PLUXC_PHOPO ACYL-COAREDUCTASE PHOTOBACTERIUM  54-91 PHOSPHOREUM PLUXC_VIBFI ACYL-COAREDUCTASE VIBRIO FISCHERI  16-65 PLUXC_XENLU ACYL-COA REDUCTASEXENORHABDUS LUMINESCENS  39-69 PLUXD_PHOLE ACYL TRANSFERASEPHOTOBACTERIUM LEIOGNATHI  89-119  218-245 PLUXE_VIBHALUCIFERIN-COMPONENT VIBRIO HARVEYI  30-57 LIGASE PLUXF_PHOLENON-FLUORESCENT FLAVO- PHOTOBACTERIUM LEIOGNATHI  145-172 PROTEINPLUXF_PHOPO NON-FLUORESCENT FLAVO- PHOTOBACTERIUM  37-85  99-126 PROTEINPHOSPHOREUM PLUXG_VIBFI PROBABLE FLAVIN VIBRIO FISCHERI  137-168REDUCTASE PLUXH_VIBHA LUXH PROTEIN VIBRIO HARVEYI  96-123 PLUXI_VIBFIOHHL SYNTHESIS PROTEIN VIBRIO FISCHERI  30-58 LUXI PLUXJ_VIBFI OHHLSYNTHESIS PROTEIN VIBRIO FISCHERI  30-57 LUXI PLUXP_PHOPO LUMAZINEPROTEIN PHOTOBACTERIUM  51-85  162-189 PHOSPHOREUM PLUXR_VIBHA LUXRREGULATORY PROTEIN VIBRIO HARVEYI  61-88 PLXB1_PHOLE ALKANALMONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI  268-295 BETA CHAIN PLXB2_PHOLEALKANAL MONOOXYGENASE PHOTOBACTERIUM LEIOGNATHI  228-255 BETA CHAINPLYB_BACSU B-ENZYME BACILLUS SUBTILIS  87-114 PLYC_CLOAB AUTOLYTICLYSOZYME CLOSTRIDIUM ACETOBUTYLICUM  91-118 PLYSP_ECOLI LYSINE-SPECIFICPERMEASE ESCHERICHIA COLI  142-176 PLYTB_BACSU AMIDASE ENHANCER BACILLUSSUBTILIS  55-82  150-177  467-513  555-585 PRECURSOR PLYTB_ECOLI LYTBPROTEIN ESCHERICHIA COLI  210-237 PLYTC_BACSU AMIDASE PRECURSOR BACILLUSSUBTILIS  179-213  225-252 PLYTR_BACSU MEMBRANE-BOUND PROTEIN BACILLUSSUBTILIS  13-64  259-303 LYTR PM12_STRPY M PROTEIN, SEROTYPE 12STREPTOCOCCUS PYOGENES  46-92  114-156  191-300  305-342  383-417 436-494 PRECURSOR PM24_STRPY M PROTEIN, SEROTYPE 24 STREPTOCOCCUSPYOGENES  12-46  89-128  175-202  245-272  280-313  399-457 PRECURSORPM49_STRPY M PROTEIN, SEROTYPE 49 STREPTOCOCCUS PYOGENES  12-174 269-327 PRECURSOR PM5_STRPY M PROTEIN, SEROTYPE 5 STREPTOCOCCUSPYOGENES   5-39  56-263  306-333  352-410 PRECURSOR PM6_STRPY M PROTEIN,SEROTYPE 6 STREPTOCOCCUS PYOGENES  12-39  70-282  290-324  343-401PRECURSOR PMALE_ECOLI MALTOSE-BINDING PROTEIN ESCHERICHIA COLI  20-47PRECURSOR PMALE_ENTAE MALTOSE-BINDING PROTEIN ENTEROBACTER AEROGENES 20-47 PRECURSOR PMALK_ENTAE INNER MEMBRANE PROTEIN ENTEROBACTERAEROGENES   3-30 MALK PMALT_ECOLI MALT REGULATORY PROTEIN ESCHERICHIACOLI  852-879 PMALX_STRPN MALX PROTEIN PRECURSOR STREPTOCOCCUSPNEUMONIAE  40-67  180-207 PMANB_BACSM 1,4-BETA-MANNOSIDASE A BACILLUSSP  410-441 AND B PREC PMANB_CALSA B-MANNANASE/ENDO- CALDOCELLUM 389-423  592-626 1222-1256 1296-1323 GLUCANASE A PREC SACCHAROLYTICUMPMAOX_BACST MALATE OXIDOREDUCTASE BACILLUS STEAROTHERMOPHILUS  246-273PMARR_ECOLI ANTIBIOTIC RESISTANCE ESCHERICHIA COLI  95-122 PROTEIN MARRPMBEB_ECOLI MOBILIZATION PROTEIN ESCHERICHIA COLI  38-65  100-134 MBEBPMBHL_WOLSU QUINONE-REAC NI/FE- WOLINELLA SUCCINOGENES  440-471HYDROGENASE PMCBB_ECOLI MCBB PROTEIN ESCHERICHIA COLI  47-74  122-163PMCBD_ECOLI MCBD PROTEIN ESCHERICHIA COLI  172-206  226-253  306-345PMCP1_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  272-299 CHEMOTAXISPROTEIN I PMCP2_ECOLI METHYL-ACCEPTING ESCHERICHIA COLI  258-306CHEMOTAXIS PROTEIN II PMCP2_SALTY METHYL-ACCEPTING SALMONELLATYPHIMURIUM  258-306 CHEMOTAXIS PROTEIN II PMCP3_ECOLI METHYL-ACCEPTINGESCHERICHIA COLI  288-315 CHEMOTAXIS PROTEIN III PMCP4_ECOLIMETHYL-ACCEPTING ESCHERICHIA COLI  111-145  164-191  277-304 CHEMOTAXISPROTEIN IV PMCPA_CAUCR CHEMORECEPTOR MCPA CAULOBACTER CRESCENTUS 260-287  369-403  516-543 PMCPC_SALTY CHEMOTAXIS CITRATE SALMONELLATYPHIMURIUM  314-348 TRANDUCER PMCPD_ENTAE CHEMOTAXIS ASPARTATEENTEROBACTER AEROGENES  275-302 TRANSDUCER PMCPS_ENTAE CHEMOTAXIS SERINEENTEROBACTER AEROGENES  41-68  158-208  317-351  488-522 TRANSDUCERPMCRA_ECOLI SPECIFIC RESTRICTION ESCHERICHIA COLI  37-71 ENZYME APMCRA_METBA METHYL-COENZYME M METHANOSARCINA BARKERI  375-405 REDUCTASEPMCRA_METVA METHYL-COENZYME M METHANOCOCCUS VANNIELII  335-362 REDUCTASEPMCRA_METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE  336-363 REDUCTASEPMCRB_METFE METHYL-COENZYME M METHANOTHERMUS FERVIDUS  267-294 REDUCTASEPMCRB_METVO METHYL-COENZYME M METHANOCOCCUS VOLTAE  247-274 REDUCTASEPMCRC_ECOLI MCRC PROTEIN ESCHERICHIA COLI  111-145 PMCRD_METVO REDUCTASEOPERON METHANOCOCCUS VOLTAE  54-91 PROTEIN D PMDH_ECOLI MALATEDEHYDROGENASE ESCHERICHIA COLI  127-154 PMDH_METFE MALATE DEHYDROGENASEMETHANOTHERMUS FERVIDUS  54-88 PMDH_SALTY MALATE DEHYDROGENASESALMONELLA TYPHIMURIUM  127-154 PMDL_ECOLI MDL PROTEIN ESCHERICHIA COLI 464-491  684-711  992-1019 PMDOH_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIACOLI  119-152 MDOH PMECI_STAEP METHICILLIN RESIS REG STAPHYLOCOCCUSEPIDERMIDIS &  88-122 PROTEIN MECI AUREUS PMECR_STAEP METHICILLINRESISTANCE STAPHYLOCOCCUS EPIDERMIDIS &  439-495  546-573 MECR1 PROTEINAUREUS PMEMB_METCA METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS 214-248 COMPONENT A PMEMB_METTR METHANE MONOOXYGENASE METHYLOSINUSTRICHOSPORIUM  321-348 COMPONENT A PMEND_ECOLI SHCHC SYNTHASEESCHERICHIA COLI  333-367 PMER4_STRLI PROBABLE HG TRANSPORT STREPTOMYCESLIVIDANS  159-186 PROTEIN PMERA_BACSR MERCURIC REDUCTASE BACILLUS SP 146-180 PMERA_STAAU MERCURIC REDUCTASE STAPHYLOCOCCUS AUREUS  292-347 352-386 PMERR_STAAU MERCURIC RESISTANCE STAPHYLOCOCCUS AUREUS  86-113OPERON REG PROTEIN PMETB_ECOLI CYSTATHIONINE GAMMA- ESCHERICHIA COLI 356-383 SYNTHASE PMETC_ECOLI CYSTATHIONINE BETA- ESCHERICHIA COLI 363-390 LYASE PMETC_SALTY CYSTATHIONINE BETA- SALMONELLA TYPHIMURIUM  2-29 LYASE PMETE_ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI  448-482PMETH_ECOLI METHIONINE SYNTHASE ESCHERICHIA COLI  371-398  642-676PMFD_ECOLI TRANSCRIPTION-REPAIR ESCHERICHIA COLI  185-212 COUPLINGFACTOR PMGLA_ECOLI GALACTOSIDE-BINDING ESCHERICHIA COLI  62-89  312-380PROTEIN PMINC_BACSU SEPTUM SITE-DETERMINING BACILLUS SUBTILIS  65-122PROTEIN MINC PMIOC_ECOLI MIOC PROTEIN ESCHERICHIA COLI  102-129PM1P_CHLTR 27 KD MEMBRANE PROTEIN CHLAMYDIA TRACHOMATIS  41-75 PRECURSORPM1P_LEGMI OUTER MEMBRANE PROTEIN LEGIONELLA MICDADEI  106-133 MIPPRECURSOR PMLS1_ENTFA RRNA ADENINE N-6-METHYL- ENTEROCOCCUS FAECALIS  4-81  120-154 TRANSFERASE PMLS1_STAAU RRNA ADENINE N-6-METHYL-STAPHYLOCOCCUS AUREUS   9-47 TRANSFERASE PMLS2_ENTFA RRNA ADENINEN-6-METHYL- ENTEROCOCCUS FAECALIS   4-81  120-154 TRANSFERASEPMLSB_BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS  16-43TRANSFERASE PMLSB_ECOLI RRNA ADENINE N-6-METHYL- ESCHERICHIA COLI   4-81 120-154 TRANSFERASE PMLSB_STRPN RRNA ADENINE N-6-METHYL- STREPTOCOCCUSPNEUMONIAE   4-81  120-154 TRANSFERASE PMLSB_STRSA RRNA ADENINEN-6-METHYL- STREPTOCOCCUS SANGUIS   4-81  120-154 TRANSFERASEPMLSC_BACFR RRNA ADENINE N-6-METHYL- BACTEROIDES FRAGILIS  16-43TRANSFERASE PMMOB_METC METHANE MONOOXYGENASE METHYLOCOCCUS CAPSULATUS 34-64 REG PROTEIN B PMOAB_ECOLI MOLYBD COFAC BIOSYN ESCHERICHIA COLI 49-76 PROTEIN B PMOBA_THIFE MOBA PROTEIN THIOBACILLUS FERROOXIDANS 94-121  251-278 PMOBC_THIFE MOBC PROTEIN THIOBACILLUS FERROOXIDANS 20-47 PMOBD_THIFE MOBC PROTEIN THIOBACILLUS FERROOXIDANS  95-132PMOB_ECOLI MOB PROTEIN ESCHERICHIA COLI  45-72 PMOEA_ECOLI MOLYBDOPTERINBIO- ESCHERICHIA COLI  243-270 SYNTHESIS MOEA PROTEIN PMOP1_CLOPAMOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM  26-53 BINDING PROTEIN IPMOP2_CLOPA MOLYBDENUM-PTERIN CLOSTRIDIUM PASTEURIANUM  26-64 BINDINGPROTEIN II PMOXY_PARDE METHANOL UTIL CONT PARACOCCUS DENITRIFICANS 200-234  307-334 PROTEIN MOXY PMPEU_SYNPY BILIN BIOSYNTHESISSYNECHOCOCCUS SP   2-36  80-107  198-225 PROTEIN MPEU PMPEV_SYNPY BILINBIOSYNTHESIS SYNECHOCOCCUS SP   2-31  175-216 PMPRA_ECOLI MPRA PROTEINESCHERICHIA COLI  136-163 PMRAY_BACSU PENTAPEPTIDE- BACILLUS SUBTILIS 106-133  247-281 TRANSFERASE PMREB_BACCE ROD SHAPE-DETERMINING BACILLUSCEREUS  186-213 PROTEIN MREB PMREC_BACSU ROD SHAPE-DETERMINING BACILLUSSUBTILIS  65-112 PROTEIN MREC PMRKB_KLEPN CHAPERONE PROTEIN MRKBKLEBSIELLA PNEUMONIAE  198-232 PRECURSOR PMRKC_KLEPN MRKC PROTEINPRECURSOR KLEBSIELLA PNEUMONIAE  55-82  452-489  592-622 PMRKD_KLEPNFIMBRIA ADHESION PROTEIN KLEBSIELLA PNEUMONIAE  222-268 PRECURSORPMRKE_KLEPN MRKE PROTEIN KLEBSIELLA PNEUMONIAE  193-220 PMRP4_STRPYFIBRINOGEN-/IG-BINDING STREPTOCOCCUS PYOGENES   7-46  99-310 PROTEINPRECURSOR PMRP_STRSU MURAMIDASE-RELEASED STREPTOCOCCUS SUIS  75-102 130-177  261-291  421-448  507-534  588-622  773-800 1058-1085 PROTEINPRECURSOR PMSBA_ECOLI PROB ATP-BINDING ESCHERICHIA COLI  116-150 412-449 TRANSPORT PROTEIN MSBA PMSRA_STAEP ERYTHROMYCIN RESISTANCESTAPHYLOCOCCUS EPIDERMIDIS  174-223  323-350 PROTEIN PMSYB_ECOLI ACIDICPROTEIN MSYB ESCHERICHIA COLI  73-100 PMT57_ECOLI MODIFICATION METHYLASEESCHERICHIA COLI  250-284  474-544 ECO571 PMTA1_ACICA MODIFICATIONMETHYLASE ACINETOBACTER CALCOACETICUS  503-540 ACCI PMTAB_SYNP2MODIFICATION METHYLASE SYNECHOCOCCUS SP  19-46 AQUI BETA SUBUNITPMTB1_BREEP MODIFICATION METHYLASE BREVIBACTERIUM EPIDERMIDIS  166-200 309-336 BEPI PMTB1_HERAU MODIFICATION METHYLASE HERPETOSIPHONAURANTIACUS  281-308 HGIBI PMTB2_BACAM MODIFICATION METHYLASE BACILLUSAMYLOLIQUEFACIENS  35-62 BAMHII PMTB3_BACAR MODIFICATION METHYLASEBACILLUS ANEURINOLYTICUS  184-211 BANIII PMTBA_BACAR MODIFICATIONMETHYLASE BACILLUS ANEURINOLYTICUS  121-148  382-409 BANI PMTBB_BACSUMODIFICATION METHYLASE BACILLUS SUBTILIS  231-258  467-496 BSUBIPMTBF_BACSU MODIFICATION METHYLASE BACILLUS SUBTILIS  208-235 BSUFIPMTC1_CITFR MODIFICATION METHYLASE CITROBACTER FREUNDII   2-36  55-82 252-279 CFRBI PMTC1_HERAU MODIFICATION METHYLASE HERPETOSIPHONAURANTIACUS  120-147 HGICI PMTC2_HERAU MODIFICATION METHYLASEHERPETOSIPHON AURANTIACUS  281-311 HGICII PMTE1_ECOLI MODIFICATIONMETHYLASE ESCHERICHIA COLI  76-110  145-172 ECORI PMTE1_HERAUMODIFICATION METHYLASE HERPETOSIPHON AURANTIACUS  281-308 HGIEIPMTE2_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI   4-61 ECORIIPMTE5_ECOLI MODIFICATION METHYLASE ESCHERICHIA COLI  73-100 ECO RVPMTEC_ENTCL MODIFICATION METHYLASE ENTEROBACTER CLOACAE  418-445 ECIAPMTF1_FLAOK MODIFICATION METHYLASE FLAVOBACTERIUM OKEANOKOITES  184-211 279-306  337-366  398-425  555-646 FOKI PMTF1_FUSNU MODIFICATIONMETHYLASE FUSOBACTERIUM NUCLEATUM  22-49 FNUDI PMTG2_HAEGA MODIFICATIONMETHYLASE HAEMOPHILUS GALLINARUM  135-165 HGAI-2 PMTH2_HAEINMODIFICATION METHYLASE HAEMOPHILUS INFLUENZAE  181-208  399-426 HINCIIPMTHZ_METTF MODIFICATION METHYLASE METHANOBACTERIUM  188-215  296-323MTHZI THERMOFORMICICUM PMTK1_KLEPN MODIFICATION METHYLASE KLEBSIELLAPNEUMONIAE  270-297 KPNI PMTLD_STRMU MANNITOL-1-PHOSPHATE 5-STREPTOCOCCUS MUTANS  39-66  224-258  349-376 DEHYDROGENASE PMTM1_MORSPMODIFICATION METHYLASE MORAXELLA SP   5-39  49-104 MSPI PMTN3_NEILAMODIFICATION METHYLASE NEISSERIA LACTAMICA  124-158  183-210 NLAIIIPMTP2_PROVU MODIFICATION METHYLASE PROTEUS VULGARIS  308-335 PVU IIPMTPG_SULAC MEMBRANE-ASSOCIATED SULFOLOBUS ACIDOCALDARIUS   9-67 ATPASEPMTPS_PROST MODIFICATION METHYLASE PROVIDENCIA STUARTII  226-264 PSTIPMTR_ECOLI TRYPTOPHAN-SPECIFIC ESCHERICHIA COLI  80-107 TRANSPORTPROTEIN PMTS1_STRSA MODIFICATION METHYLASE STREPTOCOCCUS SANGUIS 116-153  434-461  600-645 STSI PMTS2_SHISO MODIFICATION METHYLASESHIGELLA SONNEI  81-108 SSOII PMTS9_STAAU MODIFICATION METHYLASESTAPHYLOCOCCUS AUREUS  233-274 SAU96I PMTSA_LACLC MODIFICATION METHYLASELACTOCOCCUS LACTIS  88-115  187-214 SCRFI-A PMTSB_LACLC MODIFICATIONMETHYLASE LACTOCOCCUS LACTIS  27-61 SCRFI-B PMTS1_SPISQ CPG DNAMETHYLASE SPIROPLASMA SP  188-230  256-290 PMTSM_SERMA MODIFICATIONMETHYLASE SERRATIA MARCESCENS  61-88 SMAI PMTT8_THETH MODIFICATIONMETHYLASE THERMUS AQUATICUS  120-157 TTHHB8I PMTV1_VIBS3 MODIFICATIONMETHYLASE VIBRIO SP  23-66 VSPI PMUKB_ECOLI MUKB PROTEIN ESCHERICHIACOLI  320-381 1014-1048 1216-1252 PMULI_ERWAM MAJOR OUTER MEMBRANEERWINIA AMYLOVORA  24-54 LIPOPROTEIN PREC PMULI_MORMO MAJOR OUTERMEMBRANE MORGANELA MORGANII  27-54 LIPOPROTEIN PREC PMULI_PROMI MAJOROUTER MEMBRANE PROTEUS MIRABILIS  21-63 LIPOPROTEIN PREC PMURD_BACSUUDP-LIGASE BACILLUS SUBTILIS  101-132  299-326 PMURE_ECOLI LIGASEESCHERICHIA COLI  107-134 PMURF_ECOLI UDP-MURNAC-PENTAPEPTIDEESCHERICHIA COLI  407-437 SYNTHETASE PMURZ_ECOLI ENOYLPYRUVATEESCHERICHIA COLI  392-419 TRANSFERASE PMURZ_ENTCL ENOYLPYRUVATEENTEROBACTER CLOACAE  392-419 TRANSFERASE PMUTA_STRCM METHYLMALONYL-COASTREPTOMYCES CINNAMONENSIS  31-58 MUTASE BETA-SUBUNIT PMUTB_PROFRMETHYLMALONYL-COA PROPIONIBACTERIUM  549-576 MUTASE ALPHA-SUBUNITFREUDENREICHII PMUTB_SALTY /G-SPECIFIC ADENINE SALMONELLA TYPHIMURIUM 273-300 GLYCOSYLASE PMUTB_STRCM METHYLMALONYL-COA STREPTOMYCESCINNAMONENSIS  481-508 MUTASE ALPHA-SUBUNIT PMUTL_ECOLI DNA MISMATCHREPAIR ESCHERICHIA COLI  80-114 PROTEIN MUTL PMUTL_SALTY DNA MISMATCHREPAIR SALMONELLA TYPHIMURIUM  80-114 PROTEIN MUTL PMUTL_VIBCH PROTEINMUTL VIBRIO CHOLERAE  134-169 PMUTS_ECOLI DNA MISMATCH REPAIRESCHERICHIA COLI  119-153 PROTEIN MUTS PMUTT_STRAM MUTT-LIKE PROTEINSTREPTOMYCES AMBOFACIENS  60-87 PMVAA_PSEMV COENZYME A REDUCTASEPSEUDOMONAS MEVALONII  341-368 PMX_STRPY M-RELATED PROTEIN STREPTOCOCCUSPYOGENES   5-129  148-182  190-217  240-301 PRECURSOR PMYCO_STRCIMYCOLYSIN PRECURSOR STREPTOMYCES CACAOI  300-352 PMYFC_YEREN MYFCPROTEIN PRECURSOR YERSINIA ENTEROCOLITICA  210-237 PNADC_SALTYNICOTINATE-NUCLEOTIDE SALMONELLA TYPHIMURIUM  123-154  255-289PYROPHOSPHORYLASE PNADR_SALTY TRANSCRIPTIONAL SALMONELLA TYPHIMURIUM 233-260 REGULATOR NADR PNAGD_ECOLI NAGD PROTEIN ESCHERICHIA COLI 75-102 PNAGH_CLOPE HYALURONOGLUCOS- CLOSTRIDIUM PERFRINGENS  48-75 990-1017 AMINIDASE PNAGR_ECOLI NAGR PROTEIN ESCHERICHIA COLI  119-153PNANH_CLOSE SIALIDASE PRECURSOR CLOSTRIDIUM SEPTICUM  11-42  289-330 922-988 PNANH_CLOSO SIALIDASE PRECURSOR CLOSTRIDIUM SORDELLII  377-404PNANH_SALTY SIALIDASE SALMONELLA TYPHIMURIUM  290-317 PNAPA_ENTHRNA(+)/H(+) ANTIPORTER ENTEROCOCCUS HIRAE  116-150 PNARG_ECOLIRESPIRATORY NITRATE ESCHERICHIA COLI  386-420 REDUCTASE ALPHA CHAINPNARL_ECOLI REGULATOR PROTEIN NARL ESCHERICHIA COLI  76-103 PNARP_ECOLIREGULATOR PROTEIN NARP ESCHERICHIA COLI  155-189 PNARX_ECOLINITRATE/NITRITE SENSOR ESCHERICHIA COLI  220-247  358-385  431-458 505-538 PROTEIN NARX PNDVA_RHIME BETA-(1→2)GLUCAN EXPORT RHIZOBIUMMELILOTI  212-239 PROTEIN PNEOR_STRCY NEOMYCIN RESISTANCE STREPTOMYCESCYANOGENUS  348-375 PROTEIN PNEUA_ECOLI ACYLNEURAMINATE ESCHERICHIA COLI 218-252  268-298 CYTIDYLYLTRANSFERASE PNFRA_ECOLI N4 ADSORPTION PROTEINA ESCHERICHIA COLI  490-517 PRECURSOR PNFRB_ECOLI N4 ADSORPTION PROTEINB ESCHERICHIA COLI   2-43  186-220  511-538 PNFRC_ECOLI N4 ADSORPTIONPROTEIN C ESCHERICHIA COLI  315-342 PNFSI_ENTCL NAD(P)H NITROREDUCTASEENTEROBACTER CLOACAE   9-36 PNHAA_ECOLI NA(+)/H(+) ANTIPORTER 1ESCHERICHIA COLI  206-233 PNHAB_ECOLI NA(+)/H(+) ANTIPORTER 2ESCHERICHIA COLI  271-305 PNHAB_PSECL NITRILE HYDRATASE PSEUDOMONASCHLORORAPHIS  71-101 SUBUNIT BETA PNHB1_RHORH NITRILE HYDRATASERHODOCOCCUS RHODOCHROUS  63-93 SUBUNIT BETA PNIFA_AZOBR NIF-SPECIFICREGULATORY AZOSPIRILLUM BRASILENSE   7-44 PROTEIN PNIFA_BRAJANIF-SPECIFIC REGULATORY BRADYRHIZOBIUM JAPONICUM  252-279 PROTEINPNIFA_HERSE NIF-SPECIFIC REGULATORY HERBASPIRILLUM SEROPEDICAE   9-51 162-203  327-354 PROTEIN PNIFA_RHILE NIF-SPECIFIC REGULATORY RHIZOBIUMLEGUMINOSARUM  100-127 PROTEIN PNIFA_RHIME NIF-SPECIFIC REGULATORYRHIZOBIUM MELILOTI  171-198 PROTEIN PNIFA_RHOCA NIF-SPECIFIC REGULATORYRHODOBACTER CAPSULATUS  260-287 PROTEIN PNIFB_AZOVI NIFB PROTEINAZOTOBACTER VINELANDII  342-369 PNIFB_KLEPN NIFB PROTEIN KLEBSIELLAPNEUMONIAE  154-181 PNIFD_ANASP NITROG MOLYBD-IRON ANABAENA SP  374-401PROTEIN PNIFD_AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE  377-404PROTEIN PNIFD_PLEBO NITROG MOLYBD-IRON PLECTONEMA BORYANUM  387-414PROTEIN PNIFD_THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS 383-410 PROTEIN PNIFE_CLOPA BIOSYNTHESIS PROTEIN NIFE CLOSTRIDIUMPASTEURIANUM  359-386 PNIFH_FRAGR NITROGENASE IRON PROTEIN FRANKIA SP 56-83 PNIFH_PLEBO NITROGENASE IRON PROTEIN PLECTONEMA BORYANUM  267-294PNIFK_AZOBR NITROG MOLYBD-IRON AZOSPIRILLUM BRASILENSE  430-457 PROTEINPNIFK_BRAJA NITROG MOLYBD-IRON BRADYRHIZOBIUM JAPONICUM  483-510 PROTEINPNIFK_BRASP NITROG MOLYBD-IRON BRADYRHIZOBIUM SP  478-505 PROTEINPNIFK_CLOPA NITROG MOLYBD-IRON CLOSTRIDIUM PASTEURIANUM  227-254 PROTEINPNIFK_THIFE NITROG MOLYBD-IRON THIOBACILLUS FERROOXIDANS  479-506PROTEIN PNIFM_AZOCH NIFM PROTEIN AZOTOBACTER CHROOCOCCUM  265-292 MCD 1PNIFN_BRAJA BIOSYNTHESIS PROTEIN BRADYRHIZOBIUM JAPONICUM  339-366 NIFNPNIFS_ANASP NIFS PROTEIN ANABAENA SP  112-139 PNIFS_LACDE NIFS PROTEINHOMOLOG LACTOBACILLUS DELBRUECKII  59-86 PNIFT_AZOVI NIFT PROTEINAZOTOBACTER VINELANDII   6-33 PNIFU_ANASL NIFU PROTEIN ANABAENA SP  7-49 PNIFU_ANASP NIFU PROTEIN ANABAENA SP  148-178 PNIFU_KLEPN NIFUPROTEIN KLEBSIELLA PNEUMONIAE  66-93 PNIKA_ECOLI NICKEL TRANSPORTPROTEIN ESCHERICHIA COLI  122-149  282-309  456-483 NIKA PRECURSORPNIKE_ECOLI NICKEL TRANSPORT PROTEIN ESCHERICHIA COLI  177-204 NIKEPNIRB_ECOLI NITRITE REDUCTASE ESCHERICHIA COLI  54-81  345-372PNIRC_ECOLI NIRC PROTEIN ESCHERICHIA COLI  212-239 PNIRS_PSESTPSEUDOMONAS CYTO- PSEUDOMONAS STUTZERI  303-333 CHROME OXIDASE PRECURSOPNISB_LACLA 117 KD MEMBRANE LACTOCOCCUS LACTIS  202-229  287-332 663-697  886-902 ASSOCIATED PROTEIN PNISC_LACLA NISIN BIOSYNTHESISLACTOCUCCUS LACTIS  52-92  140-188 PROTEIN NISC PNIST_LACLA NISINTRANSPORT PROTEIN LACTOCOCCUS LACTIS  223-257  278-305  426-470 NISTPNIVA_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUM PASTEURIANUM  100-127 234-268 ALPHA SUBUNIT PNIVO_CLOPA HOMOCITRATE SYNTHASE, CLOSTRIDIUMPASTEURIANUM  63-94  103-132  213-240  283-310 OMEGA SUBUNIT PNMPC_ECOLIPORIN PROTEIN NMPC ESCHERICHIA COLI  22-49  69-96  335-362 PRECURSORPNODC_BRASP NODULATION PROTEIN C BRADYRHIZOBIUM SP   3-30 PNODC_RHILONODULATION PROTEIN C RHIZOBIUM LOTI  286-313 PNODC_RHILT NODULATIONPROTEIN C RHIZOBIUM LEGUMINOSARUM  14-48 PNODF_RHILV NODULATION PROTEINF RHIZOBIUM LEGUMINOSARUM  31-58 PNODF_RHIMS NODULATION PROTEIN FRHIZOBIUM MELILOTI  39-66 PNODG_RHIME NODULATION PROTEIN G RHIZOBIUMMELILOTI   8-35 PNODG_RHIMS NODULATION PROTEIN G RHIZOBIUM MELILOTI  8-35 PNODL_RHILV NODULATION PROTEIN L RHIZOBIUM LEGUMINOSARUM  26-53PNODQ_AZOBR NODULATION PROTEIN Q AZOSPIRILLUM BRASILENSE  60-87PNODT_RHILT NODULATION PROTEIN T RHIZOBIUM LEGUMINOSARUM  104-134 355-382  420-454 PNODT_RHILV NODULATION PROTEIN T RHIZOBIUMLEGUMINOSARUM  364-391  416-443 PNODU_RHIFR NODULATION PROTEIN URHIZOBIUM FREDII  506-536 PNODV_BRAJA NODULATION PROTEIN VBRADYRHIZOBIUM JAPONICUM  378-419  739-766 PNODX_RHILV NODULATIONPROTEIN X RHIZOBIUM LEGUMINOSARUM  232-259 PNOLB_RHIFR NODULATIONPROTEIN NOLB RHIZOBIUM FREDII  133-160 PNOLR_RHIME NODULATION PROTEINNOLR RHIZOBIUM MELILOTI  88-115 PNOSD_PSEST NOSD PROTEIN PRECURSORPSEUDOMONAS STUTZERI  319-346 PNOSR_PSEST REGULATORY PROTEIN NOSRPSEUDOMONAS STUTZERI  127-154 PNOSZ_PSEAE NITROUS-OXIDE REDUCTASEPSEDOMONAS AERUGINOSA  267-294 PRECURSOR PNOSZ_PSEST NITROUS-OXIDEREDUCTASE PSEUDOMONAS STUTZERI  557-591 PRECURSOR PNPRE_BACAMBACILLOLYSIN PRECURSOR BACILLUS AMLOLIQUEFACIENS  113-147  217-244PNPRE_BACPO BACILLOLYSIN PRECURSOR BACILLUS POLYMYXA  57-91  187-228PNPRE_BACSU BACILLOLYSIN PRECURSOR BACILLUS SUBTILIS  116-146  307-334PNQO5_PARDE NADH-UBIQUINONE PARACOCCUS DENITRIFICANS   4-45OXIDOREDUCTASE 21 KD CHAI PNQO9_PARDE NADH-UBIQUINONE PARACOCCUSDENITRIFICANS  125-152 OXIDOREDUC 20 KD CHAIN PNRDD_ECOLI ANAERRIBONUC-TRIPHOS ESCHERICHIA COLI  91-125 REDUCTASE PNRFA_ECOLICYTOCHROME C552 ESCHERICHIA COLI  319-346 PRECURSOR PNRFG_ECOLI NRFGPROTEIN ESCHERICHIA COLI  72-111 PNRL1_RHORH ALIPHATIC NITRILASERHODOCOCCUS RHODOCHROUS  109-136 PNSR_LACLA NISIN-RESISTANCE PROTEINLACTOCOCCUS LACTIS  52-79  135-162 PNTCA_ANASP DNA-BINDING PROTEIN VF1ANABAENA SP  65-92 PNTCA_SYNP7 GLOBAL NITROGEN SYNECHOCOCCUS SP  44-91REGULATOR PNTCA_SYNP3 GLOBAL NITROGEN SYNECHOCYSTIS SP  67-94 REGULATORPNTRB_VIBAL NITROGEN REGULATION VIBRIO ALGINOLYTICUS  194-223 PROTEINNTRB PNTRC_PROVU NITROGEN REGULATION PROTEUS VULGARIS  385-412 PROTEINNR PNTRC_RHIME NITROGEN ASSIMILATION RHIZOBIUM MELILOTI  451-478REGULATORY PROTEIN PNU2C_SYNP7 NADH-PLASTOQUINONE SYNECHOCOCCUS SP 80-107 OXIDOREDUCTASE CHAIN PNU4C_SYNY3 NADH-PLASTOQUINONESYNECHOCYSTIS SP  27-54 OXIDOREDUCTASE CHAIN PNU5C_SYNP2NADH-PLASTOQUINONE SYNECHOCOCCUS SP  614-641 OXIDOREDUCTASE CHAINPNUJC_SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP  163-190OXIDOREDUCTASE SUBU PNUKC_SYNY3 PROB NADH-UBIQUINONE SYNECHOCYSTIS SP 169-199 OXIDOREDUCTASE SUBU PNULX_SYNY3 NADH-PLASTOQUINONESYNECHOCYSTIS SP  46-80 OXIDOREDUCTASE CHAIN PNUOG_ECOLI NADHDEHYDROGENASE I ESCHERICHIA COLI  368-402 CHAIN G PNUOL_ECOLI NADHDEHYDROGENASE I ESCHERICHIA COLI  30-57  496-523 CHAIN L PNUON_ECOLINADH DEHYDROGENASE I ESCHERICHIA COLI  392-419 CHAIN N PNUPC_ECOLINUCLEOTIDE PERMEASE ESCHERICHIA COLI  13-43  134-164  356-383PNUSA_ECOLI NUSA PROTEIN ESCHERICHIA COLI  21-62 PNUSB_ECOLI NUTILIZATION SUBSTANCE ESCHERICHIA COLI  17-65  70-97 PROTEIN BPNUSG_ECOLI TRANSCRIPTION ANTI- ESCHERICHIA COLI  141-168 TERMINATIONPROTEIN NUS PNUSG_THEMA TRANSCRIPTION ANTI- THERMOTOGA MARITIMA  203-230TERMINATION PROTEIN NUS PNYLB_FLASP 6-AMINOHEXANOATE-DIMERFLAVOBACTERIUM SP  223-250 HYDROLASE PNYLC_FLASP 6-AMINOHEXANOATE-DIMERFLAVOBACTERIUM SP  223-250 HYDROLASE PO16G_BACCE OLIGO-1,6-GLUCOSIDASEBACILLUS CEREUS  301-328 POCCT_AGRT6 OCTOPINE-BINDING PROTEINAGROBACTERIUM TUMEFACIENS  172-202 T PRECURSOR PODO1_AZOVI2-OXOGLUTARATE AZOTOBACTER VINELANDII  829-856 DEHYDROGENASE E1 COMPONEPODO1_BACSU 2-OXOGLUTARATE BACILLUS SUBTILIS  487-524  809-850DEHYDROGENASE E1 COMPONE PODO1_ECOLI 2-OXOGLUTARATE ESCHERICHIA COLI  6-33 DEHYDROGENASE E1 COMPONE PODO2_BACSU DIHYDROLIPOAMIDE SUC-BACILLUS SUBTILIS  30-60 TRANSF COMP PODOB_PSEPU 2-OXOGLUTARATEPSEUDOMONAS PUTIDA  223-254 DEHYDROGENASE E1 COMPONE PODP1_ECOLIPYRUVATE DEHYDRO- ESCHERICHIA COLI  624-651 GENASE E1 COMPONENTPODP2_AZOVI DIHYDROLIPOAMIDE AZOTOBACTER VINELANDII  518-545 ACETRANSCOMP PODP2_ECOLI DIHYDROLIPOAMIDE ESCHERICHIA COLI  14-41  117-144ACETRANS COMP PODPA_BACST PYRUVATE DEHYDRO- BACILLUS STEAROTHERMOPHILUS 299-333 GENASE E1 COMPONENT PODPA_BACSU PYRUVATE DEHYDRO- BACILLUSSUBTILIS  305-332 GENASE E1 COMPONENT PODPB_BACST PYRUVATE DEHYDRO-BACILLUS STEAROTHERMOPHILUS  23-50 GENASE E1 COMPONENT PODPB_BACSUPYRUVATE DEHYDRO- BACILLUS SUBTILIS  16-50 GENASE E1 COMPONENTPOM1E_CHLTR 15 KD CYSTEINE-RICH CHLAMYDIA TRACHOMATIS  38-65 PROTEIN,SEROVAR E POMA1_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE 63-90 P1 A PRECURSOR POMA1_NEIME OUTER MEMBRANE PROTEIN NEISSERIAMENINGITIDIS  359-386 P1 A PRECURSOR POMA2_NEIME OUTER MEMBRANE PROTEINNEISSERIA MENINGITIDIS  353-380 P1 A PRECURSOR POMB1_NEIGO OUTERMEMBRANE PROTEIN NEISSERIA GONORRHOEAE  63-90 P 1B PRECURSOR POMB1_NEIMEOUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS  63-90 P.IB PRECURSORPOMB2_NEIGO OUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  63-90 P.IBPRECURSOR POMB2_NEIME OUTER MEMBRANE PROTEIN NEISSERIA MENINGITIDIS 63-90 P.IB PRECURSOR POMB3_NEIME OUTER MEMBRANE PROTEIN NEISSERIAMENINGITIDIS  63-90 P.IB PRECURSOR POMB4_NEIME OUTER MEMBRANE PROTEINNEISSERIA MENINGITIDIS  24-51  63-90 P.IB PRECURSOR POMB_NEILA OUTERMEMBRANE PROTEIN NEISSERIA LACTAMICA  116-143 P.IB PRECURSOR POMB_NEISIOUTER MEMBRANE PROTEIN NEISSERIA SICCA  24-51  63-90 P.IB PRECURSORPOMLA_ACTPL OUTER MEMBRANE LIPO- ACTINOBACILLUS  114-151 PROTEINPRECURSOR PLEUROPNEUMONIAE POMP1_HAEIN OUTER MEMBRANE PROTEINHAEMOPHILUS INFLUENZAE  154-184  303-330  341-368 P1 PRECURSORPOMP2_HAEIN OUTER MEMBRANE PROTEIN HAEMOPHILUS INFLUENZAE  16-71 220-254  326-353 P2 PRECURSOR POMP3_NEIGO OUTER MEMBRANE PROTEINNEISSERIA GONORRHOEAE  14-41 P.III PRECURSOR POMP7_STAAU 70 KD OUTERMEMBRANE STAPHYLOCOCCUS AUREUS  53-80  88-115 PROTEIN PRECURSORPOMPA_THEMA OUTER MEMBRANE PROTEIN THERMOTOGA MARITIMA  100-138  151-178 183-249  255-292  301-328  351-385 ALPHA PRECURSOR POMPC_ECOLI OUTERMEMBRANE PROTEIN ESCHERICHIA COLI  20-47  64-94 C PRECURSOR POMPC_NEIGOOUTER MEMBRANE PROTEIN NEISSERIA GONORRHOEAE  89-123 P.IIC PRECURSORPOMPC_SALTI OUTER MEMBRANE PROTEIN SALMONELLA TYPHI  166-193 C PRECURSORPOMPF_ECOLI OUTER MEMBRANE PROTEIN ESCHERICHIA COLI  21-55  231-258 FPRECURSOR POMPH_PHOS9 OMPH PROTEIN PHOTOBACTERIUM SP  292-319POMPT_ECOLI PROTEASE VII PRECURSOR ESCHERICHIA COLI  37-64 POP65_NEIGOOPACITY PROTEIN OPA65 NEISSERIA GONORRHOEAE  71-111 POP67_NEIGO OPACITYPROTEIN OPA67 NEISSERIA GONORRHOEAE  72-109 POPAA_NEIGO OPACITY PROTEINOPA53 NEISSERIA GONORRHOEAE  71-123  140-167 POPAG_NEIGO OPACITY PROTEINOPA52 NEISSERIA GONORRHOEAE  80-107  140-167 POPAI_NEIGO OPACITY PROTEINOPA54 NEISSERIA GONORRHOEAE  80-107 POPAJ_NEIGO OPACITY PROTEIN OPA58NEISSERIA GONORRHOEAE  71-105 POPAK_NEIGO OPACITY PROTEIN OPA57NEISSERIA GONORRHOEAE  71-105 POPDA_ECOLI OLIGOPEPTIDASE A ESCHERICHIACOLI  147-174 POPDA_SALTY OLIGOPEPTIDASE A SALMONELLA TYPHIMURIUM 147-174 POPDE_PSEAE TRANSCRIPTION FACTOR PSEUDOMONAS AUREGINOSA  64-91OPDE POPPA_ECOLI OLIGOPEPTIDE-BINDING ESCHERICHIA COLI  402-432 PROTEINPRECURSOR POPPB_SALTY OLIGOPEPTIDE PERMEASE SALMONELLA TYPHIMURIUM 265-299 PROTEIN OPPB POPR1_NEIME OPACITY-RELATED PROTEIN NEISSERIAMENINGITIDIS  108-135 POMP1 POPR3_NEIME OPACITY-RELATED PROTEINNEISSERIA MENINGITIDIS  94-135 POMP3 POSMC_ECOLI OSMOTICALLY INDUCIBLEESCHERICHIA COLI   5-32 PROTEIN OSMC POSPA_BORBU OUTER SURFACE PROTEIN ABORRELIA BURGDORFERI  63-100  112-139  157-204  223-271 PRECURSORPOSPB_BORBU OUTER SURFACE PROTEIN B BORRELIA BURGDORFERI  113-259 262-296 PRECURSOR POTC2_BACSU ORNITHINE CARBAMOYL- BACILLUS SUBTILIS 188-215 TRANSFERASE POTCC_PSEAE ORNITHINE CARBAMOYL- PSEUDOMONASAERUGINOSA  17-44 TRANSFERASE POTCC_PSEPU ORNITHINE CARBAMOYL-PSEUDOMONAS PUTIDA   3-33 TRANSFERASE POUTB_BACSU SPORE OUTGROWTH FACTORBACILLUS SUBTILIS  225-252 B POUTO_ERWCA LEADER PEPTIDASE ERWINIACAROTOVORA  189-216 PP18K_STRPA 18 KD PROTEIN IN FIMA STREPTOCOCCUSPARASANGUIS  115-149 3′ REGION PP18K_STRSA 18 KD PROTEIN IN SSABSTREPTOCOCCUS SANGUIS  10-37  114-148 3′ REGION PP1P_LACLC P1-TYPEPROTEINASE LACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-12501466-1496 1625-1655 PRECURSOR PP29_MYCHR PROTEIN P29 MYCOPLASMAHYORHINIS   5-56  101-160  202-246 PP2P_LACLA PII-TYPE PROTEINASELACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-1250 1446-14961625-1689 PRECURSOR PP2P_LACPA II-TYPE PROTEINASE LACTOBACILLUSPARACASEI  107-155  904-941 1073-1100 1223-1250 1446-1496 1628-1655PRECURSOR PP30_ECOLI P30 PROTEIN ESCHERICHIA COLI  55-82 PP34_RICRIPROTEIN P34 RICKETTSIA RICKETTSII   9-47  135-173 PP37_MYCHR PROTEIN P37PRECURSOR MYCOPLASMA HYORHINIS  38-75 PP3P_LACLC PIII-TYPE PROTEINASELACTOCOCCUS LACTIS  107-155  904-950 1073-1100 1223-1250 1446-14961628-1655 PRECURSOR PP47K_PSECL 47 KD PROTEIN PSEUDOMONAS CHLORORAPHIS 288-315 PP54_ENTFC P54 PROTEIN PRECURSOR ENTEROCOCCUS FAECIUM  58-92 141-209 PP60_LISGR PROTEIN P60 PRECURSOR LISTERIA GRAYI  31-61  101-142 300-334  431-458 PP60_LISIN PROTEIN P60 PRECURSOR LISTERIA INNOCUA 67-94  102-143 PP60_LISIV PROTEIN P60 PRECURSOR LISTERIA IVANOVII 101-140  315-359 PP60_LISMO PROTEIN P60 PRECURSOR LISTERIAMONOCYTOGENES  103-144 PP60_LISSE PROTEIN P60 PRECURSOR LISTERIASEELIGERI  101-140  270-298  321-365  395-422 PP60_LISWE PROETIN P60PRECURSOR LISTERIA WELSHIMERI  113-140  317-361  396-423 PP69_MYCHRPROTEIN P69 MYCOPLASMA HYORHINIS  264-295  421-464  487-517  544-575PPABA_BACSU ADC SYNTHASE BACILLUS SUBTILIS  12-41 PPABC_BACSU 4-AMINO-4-BACILLUS SUBTILIS  250-277 DEOXYCHORISMATE LYASE PPABC_ECOLI 4-AMINO-4-ESCHERICHIA COLI  140-167 DEOXYCHORISMATE LYASE PPABL_STRGR PROTEIN YSTREPTOMYCES GRISEUS  52-79 PPAC_ARTVI PENICILLIN ACYLASE ARTHROBACTERVISCOSUS  170-197  333-363  571-606  640-674 PRECURSOR PPAC_BACSHPENICILLIN ACYLASE BACILLUS SPHAERICUS  232-259 PPAC_STRMU PAC PROTEINPRECURSOR STREPTOCOCCUS MUTANS  146-276  281-465  538-565  576-6301075-1102 1159-1186 1381-1434 PPAI1_BACSU REGULATORY PROTEIN PAI 1BACILLUS SUBTILIS  103-137 PPAI2_BACSU REGULATORY PROTEIN PAI 2 BACILLUSSUBTILIS  145-172 PPAPE_ECOLI FIMBRIAL PROTEIN PAPE ESCHERICHIA COLI 42-69  86-123 PPAPF_ECOLI MINOR FIMBRIAL PROTEIN ESCHERICHIA COLI  4-31 PAPF PPAPG_ECOLI FIMBRIAL PROTEIN PAPG ESCHERICHIA COLI  282-316PRECURSOR PPARA_AGRTU PARA PROTEIN AGROBACTERIUM TUMEFACIENS  60-87PPARB_ECOLI PLASMID PARTITION PAR B ESCHERICHIA COLI  117-154  249-283PROTEIN PPARE_ECOLI TOPOISOMERASE IV SUBUNIT ESCHERICHIA COLI  444-471 526-553 B PPARE_SALTY TOPOISOMERASE IV SUBUNIT SALMONELLA TYPHIMURIUM 444-471  526-553 B PPA_BACAN PROTECTIVE ANTIGEN BACILLUS ANTHRACIS 13-52  125-152  296-335  585-615  650-684 PRECURSOR PPBP2_ECOLIPENICILLIN-BINDING ESCHERICHIA COLI  95-122  178-205  207-241 PROTEIN 2PPPB2_NEIGO PENICILLIN-BINDING NEISSERIA GONORRHOEAE  193-220 PROTEIN 2PPBP2_NEIME PENICILLIN-BINDING NEISSERIA MENINGITIDIS  193-220 PROTEIN 2PPBP2_STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE  144-183 216-243  259-286  605-632 PROTEIN 2B PPBP3_ECOLI PENICILLIN-BINDINGESCHERICHIA COLI  224-251  334-368 PROTEIN 3 PRECURSOR PPBP4_BACSUPENICILLIN-BINDING BACILLUS SUBTILIS  374-401 PROTEIN 4° PPBP4_ECOLIPENICILLIN-BINDING ESCHERICHIA COLI  336-363 PROTEIN 4 PRECURSORPPBPA_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  145-172 PROTEIN 1APPBPB_ECOLI PENICILLIN-BINDING ESCHERICHIA COLI  62-96  263-290 PROTEIN1B PPBPX_STRPN PENICILLIN-BINDING STREPTOCOCCUS PNEUMONIAE  89-116 706-733 PROTEIN 2X PPBP_STAAU PENICILLIN-BINDING STAPHYLOCOCCUS AUREUS 78-108  176-203  263-324  502-529 PROTEIN PPCAB_PSEPU CYCLOISOMERASEPSEUDOMONAS PUTIDA  115-142  226-253 PPEL3_ERWCA PECTATE LYASE IIIERWINIA CAROTOVORA  110-137 PRECURSOR PPELA_ERWCA PECTATE LYASE AERWINIA CAROTOVORA  110-137 PRECURSOR PPELB_ERWCA PECTATE LYASE BERWINIA CAROTOVORA  110-137 PRECURSOR PPELC_ERWCA PECTATE LYASE CERWINIA CAROTOVORA  110-137 PRECURSOR PPELF_ERWCH PECTATE LYASE EERWINIA CHRYSANTHEMI  40-67  209-243 PRECURSOR PPELP_ERWCA PERIPLASMICPECTATE ERWINIA CAROTOVORA  455-482 LYASE PRECURSOR PPELP_YERPSPERIPLASMIC PECTATE YERSINIA PSEUDOTUBERCULOSIS  459-489 LYASE PRECURSORPPELX_ERWCA PUTATIVE PECTATE LYASE X ERWINIA CAROTOVORA  188-218PRECURSOR PPELX_ERWCH EXOPOLYGALACTURONATE ERWINIA CHRYSANTHEMI  466-493LYASE PRECURSOR PPEPD_ECOLI AMINOACYL-HISTIDINE ESCHERICHIA COLI 264-314 DIPEPTIDASE PPEPQ_ECOLI X-PRO DIPEPTIDASE ESCHERICHIA COLI 251-278 PPERT_BORBR PERTACTIN PRECURSOR BORDETELLA BRONCHISEPTICA 617-644 PPERT_BORPA PERTACTIN PRECURSOR BORDETELLA PARAPERTUSSIS 628-655 PPERT_BORPE PERTACTIN PRECURSOR BORDETELLA PERTUSSIS  616-643PPGK_CORGL PHOSPHOGLYCERATE CORYNEBACTERIUM GLUTMICUM  83-117 KINASEPPGK_ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI  186-216 KINASE PPGK_METBRPHOSPHOGLYCERATE METHANOBACTERIUM BRYANTII  36-63 KINASE PPGK_THETHPHOSPHOGLYCERATE THERMUS AQUATICUS  222-249 KINASE PPGL1_ERWCAENDO-POLYGALACTURO- ERWINIA CAROTOVORA  237-271 NASE PRECURSORPPGTE_SALTY OUTER MEMBRANE SALMONELLA TYPHIMURIUM  66-93 PROTEASE EPRECURSOR PPHA1_FREDI C-PHYCOCYANIN-1 ALPHA FREMYELLA DIPLOSIPHON  21-48CHAIN PPHA2_FREDI C-PHYCOCYANIN-2 ALPHA FREMYELLA DIPLOSIPHON  21-48CHAIN PPHAA_PSEOL POLY(3-HYDROXY- PSEUDOMONAS OLEOVORANS  264-291ALKANOATE) POLYMERASE 1 PPHAB_ANACY ALLOPHYCOCYANIN BETA ANABAENACYLINDRICA   7-48 CHAIN PPHAB_ANAVA ALLOPHYCOCYANIN BETA ANABAENAVARIABILIS  14-48 CHAIN PPHAB_FREDI ALLOPHYCOCYANIN BETA FREMYELLADIPLOSIPHON   8-49 CHAIN PPHAB_MASLA ALLOPHYCOCYANIN BETA MASTIGOCLADUSLAMINOSUS  14-41 CHAIN PPHAB_SYNP6 ALLOPHYCOCYANIN BETA SYNECHOCOCCUS SP 14-41 CHAIN PPHAC_SYNP6 ALLOPHYCOCYANIN ALPHA- SYNECHOCOCCUS SP  33-60B CHAIN PPHAG_FREDI ALLOPHYCOCYANIN GAMMA FREMYELLA DIPLOSIPHON  32-59CHAIN PPHB3_FREDI C-PHYCOCYANIN-3 BETA FREMYELLA DIPLOSIPHON  29-56CHAIN PPHBB_ALCEU ACETOACETYL-COA ALCALIGENES EUTROPHUS  55-85 REDUCTASEPPHCA_SYNY1 C-PHYCOCYANIN ALPHA SYNECHOCYSTIS SP  21-55 CHAINPPHCB_SYNP6 C-PHYCOCYANIN BETA SYNECHOCOCCUS SP  28-55 CHAIN PPHCB_SYNP7C-PHYCOCYANIN BETA SYNECHOCOCCUS SP  28-55 CHAIN PPHCB_SYNY1C-PHYCOCYANIN BETA SYNECHOCYSTIS SP  21-55 CHAIN PPHEA_ECOLI CHORISMATEMUTASE ESCHERICHIA COLI  10-37 PPHEA_ERWHE CHORISMATE MUTASE ERWINIAHERBICOLA  10-37  159-186  252-286 PPHEA_PSESP PHENOL 2-MONOOXYGENASEPSEUDOMONAS SP  171-201  282-314  437-464 PPHEB_MASLA PHYCOERYTHROCYANINMASTIGOCLADUS LAMINOSUS  21-62 BETA CHAIN PPHEB_PSESP CATHECHOL 1,2-PSEUDOMONAS SP  24-51 DIOXYGENASE PPHEG_SYNPY LINKER POLYPEPTIDESYNECHOCOCCUS SP  158-185 PPHEP_ECOLI PHENYLALANINE-SPECIFIC ESCHERICHIACOLI  284-311 PERMEASE PPHF1_CLOPA PERIPLASMIC [FE] CLOSTRIDIUMPASTEURIANUM  434-471 HYDROGENASE 1 PPHL1_BACCE SPHINGOMYELINASE CBACILLUS CEREUS   2-36 PRECURSOR PPHL2_BACCE SPHINGOMYELINASE C BACILLUSCEREUS   2-36 PRECURSOR PPHL3_BACCE SPHINGOMYELINASE C BACILLUS CEREUS  2-36 PRECURSOR PPHLC_BACCE PHOSPHOLIPASE C BACILLUS CEREUS  32-59 179-206 PRECURSOR PPHLC_CLOBI PHOSPHOLIPASE C CLOSTRIDIUM BIFERMENTANS 50-77  335-365 PRECURSOR PPHLC_CLOPE PHOSPHOLIPASE C CLOSTRIDIUMPERFRINGENS  210-237  369-398 PRECURSOR PPHLC_LISMO PHOSPHOLIPASE CLISTERIA MONOCYTOGENES  147-174 PRECURSOR PPHLC_PSEAE HEMOLYTICPHOSPHOLIPASE PSEUDOMONAS AERUGINOSA  685-712 C PRECURSOR PPHLC_STAAUPHOSPHOLIPASE C STAPHYLOCOCCUS AUREUS   6-33 PRECURSOR PPHLD_BACCEPHOSPHOLIPASE C BACILLUS CEREUS  179-206 PRECURSOR PPHL_LEPINSPHINGOMYELINASE C LEPTOSPIRA INTERROGANS  30-57  394-428 PRECURSORPPHND_ECOLI PHND PROTEIN ESCHERICHIA COLI  296-326 PPHNK_ECOLI PHNKPROTEIN ESCHERICHIA COLI  178-205 PPHNM_ECOLI PHNM PROTEIN ESCHERICHIACOLI   5-35 PPHOE_CITFR OUTER MEMBRANE PORE CITROBACTER FREUNDII  13-40 47-105 PROTEIN E PRECURSOR PPHOE_ECOLI OUTER MEMBRANE PORE ESCHERICHIACOLI  13-40  64-105  168-195  226-253 PROTEIN E PRECURSOR PPHOE_KLEOXOUTER MEMBRANE PORE KLEBSIELLA OXYTOCA  13-40  64-91 PROTEIN E PRECURSORPPHOE_KLEPN OUTER MEMBRANE PORE KLEBSIELLA PNEUMONIAE  13-40  64-105PROTEIN E PRECURSOR PPHOE_SALTY OUTER MEMBRANE PORE SALMONELLATYPHIMURIUM  63-104  320-347 PROTEIN E PRECURSOR PPHOP_BACSU ALK PHOSSYNTHESIS BACILLUS SUBTILIS  185-219 TRANS REG PROTEIN PPHOQ_ECOLISENSOR PROTEIN PHOQ ESCHERICHIA COLI  244-278 PPHOQ_SALTY VIRULENCESENSOR PROTEIN SALMONELLA TYPHIMURIUM  226-260 PHOQ PPHOR_BACSU ALK PHOSSYNTHESIS BACILLUS SUBTILIS  89-145  387-425 SENSOR PROTEIN PHORPPHRA_ECOLI PHOTOREPAIR PROTEIN ESCHERICHIA COLI  63-90  207-241 PHRAPPHRA_SYNPY R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP  20-47 CHAINPPHRA_SYNPZ R-PHYCOCYANIN II ALPHA SYNECHOCOCCUS SP  20-47 CHAINPPHSG_ECOLI GLYCOGEN PHOSPHORYLASE ESCHERICHIA COLI  157-184  488-515PPHSM_ECOLI MALTODEXTRIN ESCHERICHIA COLI  71-108 PHOSPHORYLASEPPILA_NEIGO PROB SIGNAL RECOGNITION NEISSERIA GONORRHOEAE  17-68PARTICLE PROTEIN PPILB_PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA 16-60 PROTEIN PILB PPILC_PSEAE PILC PROTEIN PSEUDOMONAS AERUGINOSA 143-170 PPILD_NEIGO LEADER PEPTIDASE NEISSERIA GONORRHOEAE  110-137PPILQ_PSEAE FIMBRIAL ASSEMBLY PSEUDOMONAS AERUGINOSA  71-115  639-666PROTEIN PILQ PRECURSOR PPILS_PSEAE SENSOR PROTEIN PILS PSEUDOMONASAERUGINOSA   9-46 PPIR_ECOLI P1 PROTEIN ESCHERICHIA COLI  156-188PPIV_MORBO PILIN GENE INVERTING MORAXELLA BOVIS  42-69  152-182 PROTEINPPIV_MORLA PILIN GENE INVERTING MORAXELLA LACUNATA  152-182 PROTEINPPLC_BACCE PHOSPHODIESTERASE BACILLUS CEREUS  217-245 PRECURSORPPLC_BACTU PHOSPHODIESTERASE BACILLUS THURINGIENSIS  216-245 PRECURSORPPLC_LISMO PHOSPHODIESTERASE LISTERIA MONOCYTOGENES  238-265 PRECURSORPPLSC_ECOLI ACYLTRANSFERASE ESCHERICHIA COLI  106-133 PPLSX_ECOLI PLSXPROTEIN ESCHERICHIA COLI  241-270 PPLYD_ERWCA PECTIN LYASE ERWINIACAROTOVORA  27-92 PPMBA_ECOLI PMPA PROTEIN ESCHERICHIA COLI   9-50PPME_ERWCH PECTINESTERASE ERWINIA CHRYSANTHEMI  60-87 PRECURSORPPMGY_ECOLI PHOSPHOGLYCERATE ESCHERICHIA COLI  82-116 MUTASE PPMGY_ZYMMPHOSPHOGLYCERATE ZYMOMONAS MOBILIS  13-40  80-110 MUTASE PPNP_ECOLIPOLYRIBONUC ESCHERICHIA COLI  260-294 NUCLEOTIDYLTRANSF PPNUC_SALTY PNUCPROTEIN SALMONELLA TYPHIMURIUM  178-205 PPODK_BACSY PYRUVATE, ORTHO-BACTEROIDES SYMBIOSUS  51-78 PHOSPHATE DIKINASE PPORF_PSESY OUTERMEMBRANE PORIN PSEUDOMONAS SYRINGAE  111-138 F PRECURSOR PPORO_PSEAEPORIN O PRECURSOR PSEUDOMONAS AERUGINOSA  390-424 PPORP_PSEAE PORIN PPRECURSOR PSEUDOMONAS AERUGINOSA  139-181  260-287  369-396 PPOTD_ECOLIBINDING PROTEIN ESCHERICHIA COLI  320-347 PRECURSOR PPOTE_ECOLIPUTRESCINE-ORNITHINE ESCHERICHIA COLI  91-118 ANTIPORTER PPOXB_ECOLIPYRUVATE DEHYDRO- ESCHERICHIA COLI   8-38 GENASE PPPB3_BACSU ALKALINEPHOSPHATASE III BACILLUS SUBTILIS  109-150  433-460 PRECURSORPPPB4_BACSU ALKALINE PHOSPHATASE IV BACILLUS SUBTILIS  85-123  336-363PRECURSOR PPPB_ECOLI ALKALINE PHOSPHATASE ESCHERICHIA COLI  235-262PRECURSOR PPPB_ESCFE ALKALINE PHOSPHATE ESCHERICHIA FERGUSONII  236-263PRECURSOR PPPCE_FLAME PROLYL ENDOPEPTIDASE FLAVOBACTERIUM  158-199PRECURSOR MENINGOSEPTICUM PPPCF_FLAME PROLYL ENDOPEPTIDASEFLAVOBACTERIUM  158-199  256-283 PRECURSOR MENINGOSEPTICUM PPPCK_ECOLIPHOSPHOENOLPYRUVATE ESCHERICHIA COLI  45-72 CARBOXYKINASE PPPDA_CLOPEPROTEIN A PRECURSOR CLOSTRIDIUM PERFRINGENS  73-107 PPPSA_ECOLIPHOSPHOENOLPYRUVATE ESCHERICHIA COLI  49-76 SYNTHASE PPQQ2_ACICACOENZYME PQQ SYNTHESIS ACINETOBACTER CALCOACETICUS  40-74 PROTEIN IIPPRCA_ANAVA CALCIUM DEPENDENT ANABAENA VARIABILIS  371-398 PROTEASEPRECURSOR PPRCA_THEAC PROTEASOME, ALPHA THERMOPLASMA ACIDOPHILUM  88-115SUBUNIT PPRC_ECOLI TAIL-SPECIFIC PROTEASE ESCHERICHIA COLI  158-192 366-393 PRECURSOR PPRE1_STAAU PLASMID RECOMBINATION STAPHYLOCOCCUSAUREUS  27-78  152-179  264-347 ENZYME PPRE2_STAAU PLASMID RECOMBINATIONSTAPHYLOCOCCUS AUREUS  48-75  181-208  310-361  366-393 ENZYMEPPREA_LACPL PLASMID RECOMBINATION LACTOBACILLUS PLANTARUM  37-71 291-318 ENZYME PPRE_BACLI REGULATORY PROTEIN BACILLUS LICHENIFORMIS  2-40 PPRE_BACSP PLASMID RECOMBINATION BACILLUS SP  181-224  288-345ENZYME PPRE_STRAG PLASMID RECOMBINATION STREPTOCOCCUS AGALACTIAE 285-319  332-359  420-454 ENZYME PPRFA_LISMO LISTERIOLYSIN REGULA-LISTERIA MONOCYTOGENES  76-110  173-204 TORY PROTEIN PPRIA_ECOLIPRIMOSOMAL PROTEIN N′ ESCHERICHIA COLI  218-245 PPRIM_BACSU DNA PRIMASEBACILLUS SUBTILIS  383-433 PPRIM_BUCAP DNA PRIMASE BUCHNERA APHIDICOLA 13-43  282-319 PPRIM_CLOAB DNA PRIMASE CLOSTRIDIUM ACETOBUTYLICUM 87-114 PPRIM_LACLA DNA PRIMASE LACTOCOCCUS LACTIS  269-296 PPRIM_RICPRDNA PRIMASE RICKETTSIA PROWAZEKII  10-37  245-286  477-504  526-593PPRIS_DESDE PRISMANE PROTEIN DESULFOVIBRIO DESULFURICANS  30-57PPRLB_ACHLY BETA-LYTIC METALLOENDO- ACHROMOBACTER LYTICUS  317-344PEPTIDASE PPRLB_LYSEN BETA-LYTIC METALLOENDO- LYSOBACTER ENZYMOGENES 121-148 PEPTIDASE PPRO1_LISMO ZINC METALLOPROTEINASE LISTERIAMONOCYTOGENES  111-145  275-316 PRECURSOR PPRO2_LISMO ZINCMETALLOPROTEINASE LISTERIA MONOCYTOGENES  111-145 PRECURSOR PPROA_SERMAGAMMA-GLUTAMYL SERRATIA MARCESCENS  309-336 PHOSPHATE REDUCTASEPPROA_STAAU PROTEIN A PRECURSOR STAPHYLOCOCCUS AUREUS   2-29 PPROB_SERMAGLUTAMATE 5-KINASE SERRATIA MARCESCENS   7-34 PPROB_STRAG PROTEIN BSTREPTOCOCCUS AGALACTIAE  58-85 PPROC_PSEAE PYRROLINE-5- PSEUDOMONASAERUGINOSA  148-175 CARBOXYLATE REDUCTASE PPROH_BACSU PYRROLINE-5-BACILLUS SUBTILIS  200-227 CARBOXYLATE REDUCTASE HOMOL PPROP_ECOLIPROLINE/BETAINE ESCHERICHIA COLI  460-487 TRANSPORTER PPROV_ECOLIPERIPHERAL MEMBRANE ESCHERICHIA COLI  24-54 PROTEIN PROV PPROV_SALTYPERIPHERAL MEMBRANE SALMONELLA TYPHIMURIUM  24-54 PROTEIN PROVPPRRB_ECOLI PRRB PROTEIN ESCHERICHIA COLI  170-197 PPRRC_ECOLI ANTICODONNUCLEASE ESCHERICHIA COLI  282-309 PPRRD_ECOLI PRRD PROTEIN ESCHERICHIACOLI  278-305 PPRSA_BACSU PROTEIN EXPORT PROTEIN BACILLUS SUBTILIS 52-87  95-157 PRSA PRECURSOR PPRTA_STRGR PROTEASE A PRECURSORSTREPTOMYCES GRISEUS  56-110 PPRTC_ERWCH SECRETED PROTEASE C ERWINIACHRYSANTHEMI  103-130 PRECURSOR PPRTC_PORGI COLLAGENASE PRECURSORPORPHYROMONAS GINGIVALIS  285-312 PPRTD_ERWCH PROTEASES SECRETIONERWINIA CHRYSANTHEMI  328-355 PROTEIN PRTD PPRTE_BACNO EXTRACELLULARSERINE BACTEROIDES NODOSUS  106-133  219-265  346-384 PROTEASE PRECURSORPPRTE_ERWCH PROTEASES SECRETION ERWINIA CHRYSANTHEMI  108-135  158-192 231-290 PROTEIN PRTE PPRTF_ERWCH PROTEASES SECRETION ERWINIACHRYSANTHEMI  280-310 PROTEIN PRTF PPRTM_LACLA PROTEASE MATURATIONLACTOCOCCUS LACTIS  76-103  112-139 PROTEIN PRECURSOR PPRTM_LACLCPROTEASE MATURATION LACTOCOCCUS LACTIS  26-53  76-103  112-139 PROTEINPRECURSOR PPRTM_LACPA PROTEASE MATURATION LACTOBACILLUS PARACASEI 76-103  112-139 PROTEIN PRECURSOR PPRTS_SERMA EXTRACELLULAR SERINESERRATIA MARCESCENS  304-331  576-607 1007-1041 PROTEASE PRECURSORPPRTT_SERMA EXTRACELLULAR SERINE SERRATIA MARCESCENS  304-331  464-4911007-1041 PROTEASE PRECURSOR PPRTX_ERWCH SECRETED PROTEASE C ERWINIACHRYSANTHEMI  314-341 PRECURSOR PPSAA_SYNEN CHLOROPHYLL A SYNECHOCOCCUSELONGATUS  120-147 APOPROTEIN A1 NAEGEL PPSAA_SYNP2 CHLOROPHYLL ASYNECHOCOCCUS SP  109-136  326-356 APOPROTEIN A1 PPSAA_SYNVU CHLOROPHYLLA SYNECHOCOCCUS VULCANUS  120-147 APOPROTEIN A1 PPSAA_SYNY3 CHLOROPHYLLA SYNECHOCYSTIS SP  44-71  120-147  338-368 APOPROTEIN A1 PPSAB_YERPECHAPERONE PROTEIN PSAB YERSINIA PESTIS  244-271 PRECURSOR PPSAD_SYNP6PHOTOSYSTEM 1 REACTION SYNECHOCOCCUS SP  11-38 CENTRE SUBUNIT IIPPSAE_YERPE PSAE PROTEIN PRECURSOR YERSINIA PESTIS  66-118 PPSBO_ANANISTABILIZING POLYPEPTIDE ANACYSTIS NIDULANS  99-126  209-243 PRECURSORPPSPA_ECOLI PHAGE SHOCK PROTEIN A ESCHERICHIA COLI  55-82 PPSRA_WOLSUPOLYSULFIDE REDUCTASE WOLINELLA SUCCINOGENES  114-141 CHAIN A PRECURSORPPSTS_ECOLI PHOSPHATE-BINDING ESCHERICHIA COLI  40-74 PROTEIN PRECURSORPPT1_BACSU PHOSPHOTRANSFERASE BACILLUS SUBTILIS  26-60 PPT1_ECOLIPHOSPHOTRANSFERASE ESCHERICHIA COLI  135-162  399-426 PPT1_SALTYPHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM  232-259  399-426 PPT1_STACAPHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS  34-61 PPT1_STRSLPHOSPHOTRANSFERASE STREPTOCOCCUS SALIVARIUS  34-61  198-232 PPT2B_ERWCHPHOSPHOTRANSFERASE ERWINIA CHRYSANTHEMI  127-154 ENZYME II PPT2G_BACSUPHOSPHOTRANSFERASE BACILLUS SUBTILIS  670-697 ENZYME II PPT2L_LACCAPHOSPHOTRANSFERASE LACTOBACILLUS CASEI  537-564 ENZYME II PPT2L_LACLAPHOSPHOTRANSFERASE LACTOCOCCUS LACTIS  183-214  409-436 ENZYME IIPPT2L_STAAU PHOSPHOTRANSFERASE STAPHYLOCOCCUS AUREUS  421-448  530-557ENZYME II PPT2M_ECOLI PHOSPHOTRANSFERASE ESCHERICHIA COLI  445-489ENZYME II PPT2M_STACA PHOSPHOTRANSFERASE STAPHYLOCOCCUS CARNOSUS 388-415 ENZYME II PPT2N_ECOLI N-ACETYLGLUCOSAMINE- ESCHERICHIA COLI 370-400 PERMEASE PPT2S_STRMU PHOSPHOTRANSFERASE STREPTOCOCCUS MUTANS 600-627 ENZYME II PPT3F_SALTY PHOSPHOTRANSFERASE SALMONELLA TYPHIMURIUM 107-134 FPR PROTEIN PPT3L_LACCA PHOSPHOTRANSFERASE LACTOBACILLUS CASEI 40-67 FACTOR III PPTHP_ECOLI PHOSPHOCARRIER PROTEIN ESCHERICHIA COLI & 31-65 HPR SALMONELLA TYPHIMURIUM PPTHP_KLEPN PHOSPHOCARRIER PROTEINKLEBSIELLA PNEUMONIAE  31-65 HPR PPTRB_ECOLI PROTEASE II ESCHERICHIACOLI  94-121  217-251 PPULA_KLEAE PULLULANASE KLEBSIELLA AEROGENES 894-928 PPULA_KLEPN PULLULANASE KLEBSIELLA PNEUMONIAE  894-918PPULO_KLEPN LEADER PEPTIDASE KLEBSIELLA PNEUMONIAE  178-205 PPULS_KLEPNPULS PRECURSOR KLEBSIELLA PNEUMONIAE  70-97 PPUPA_PSEPU UPTAKE PROTEINPSEUDOMONAS PUTIDA  112-162  210-237  429-463  736-763 PRECURSORPPUR1_BACSU AMIDOPHOSPHORIBOSYL- BACILLUS SUBTILIS  394-421 TRANSF PRECPPUR2_BACSU PHOSPHORIBOSYLAMINE-- BACILLUS SUBTILIS  349-376 GLYCINELIGASE PPUR3_BACSU FORMYLTRANSFERASE BACILLUS SUBTILIS  149-176PPUR3_ECOLI FORMYLTRANSFERASE ESCHERICHIA COLI  27-54 PPUR4_BACSUSYNTHASE I BACILLUS SUBTILIS  18-45 PPUR5_BACSU CYCLO-LIGASE BACILLUSSUBTILIS  153-194 PPUR6_ECOLI AIR CARBOXYLASE ESCHERICHIA COLI  131-158PPUR7_BACSU SAICAR SYNTHETASE BACILLUS SUBTILIS   3-43 PPUR8_BACSUADENYLOSUCCINATE LYASE BACILLUS SUBTILIS  56-130  226-253 PPUR8_ECOLIADENYLOSUCCINATE LYASE ESCHERICHIA COLI  194-221  331-372 PPUR9_BACSUAICAR TRANSFORMYLASE BACILLUS SUBTILIS  19-53  345-372 PPUR9_ECOLI AICARTRANSFORMYLASE ESCHERICHIA COLI  239-268 PPUR9_SALTY AICARTRANSFORMYLASE SALMONELLA TYPHIMURIUM  218-247 PPURL_BACSU SYNTHASE IIBACILLUS SUBTILIS  609-636 PPYG1_ANASP LINKER POLYPEPTIDE CPCG1 ANABAENASP  88-115 PPYG1_MASLA LINKER POLYPEPTIDE CPCG1 MASTIGOCLADUS LAMINOSUS 89-116 PPYG2_ANASP LINKER POLYPEPTIDE CPCG2 ANABAENA SP  88-115PPYG2_MASLA LINKER POLYPEPTIDE CPCG2 MASTIGOCLADUS LAMINOSUS  89-116PPYG3_MASLA LINKER POLYPEPTIDE CPCG3 MASTIGOCLADUS LAMINOSUS  91-132PPYG4_ANASP LINKER POLYPEPTIDE CPCG4 ANABAENA SP  90-131 PPYR1_ANASP32.1 KD LINKER POLYPEPTIDE ANABAENA SP  35-62 PPYR2_FREDI 27.9 KD LINKERPOLYPEPTIDE FREMYELLA DIPLOSIPHON  105-132 PPYR4_FREDI 31.6 KD LINKERPOLYPEPTIDE FREMYELLA DIPLOSIPHON  22-66 PPYR5_FREDI 37.5 KD LINKERPOLYPEPTIDE FREMYELLA DIPLOSIPHON  106-143 PPYR6_FREDI 30.8 KD LINKERPOLYPEPTIDE FREMYELLA DIPLOSIPHON  43-70  113-140 PPYRB_BACSU ASPARTATECARBAMOYL- BACILLUS SUBTILIS   9-36 TRANSFERASE PPYRB_SERMA ASPARTATECARBAMOYL- SERRATIA MARCESCENS  70-97 TRANSFERASE PPYRD_ECOLIDIHYDROOROTATE ESCHERICHIA COLI  115-142 DEHYDROGENASE PPYRD_SALTYDIHYDROOROTATE SALMONELLA TYPHIMURIUM  115-142  183-210 DEHYDROGENASEPPYRG_BACSU CTP SYNTHASE BACILLUS SUBTILIS  275-302  322-349 PPYS1_FREDIPHYCOBILISOME 9.7 KD FREMYELLA DIPLOSIPHON  21-48 LINKER POLYPEPTIDEPQOR_ECOLI QUINONE OXIDOREDUCTASE ESCHERICHIA COLI  180-215 PQUEA_ECOLIQUEUOSINE BIOSYNTHESIS ESCHERICHIA COLI  234-261 PROTEIN QUEAPR34K_CLOPA 34.2 KD PROTEIN IN CLOSTRIDIUM PASTEURIANUM  23-50  157-232RUBREDOXIN OPERON PRACC_ECOLI RACC PROTEIN ESCHERICHIA COLI   5-32PRACD_STRTR ASPARTATE RACEMASE STREPTOCOCCUS THERMOPHILUS  152-189PRACX_BACSU PROBABLE AMINO ACID BACILLUS SUBTILIS  132-162 RACEMASEPRAFA_ECOLI ALPHA-GALACTOSIDASE ESCHERICHIA COLI  89-116 PRAFD_ECOLIRAFFINOSE INVERTASE ESCHERICHIA COLI  348-375 PRBSC_ECOLI RIBOSETRANSPORT SYSTEM ESCHERICHIA COLI  65-99  195-222 COMPONENT PRBSK_ECOLIRIBOKINASE ESCHERICHIA COLI  200-239 PRBTR_KLEAE RIBITOL (RBT) OPERONKLEBSIELLA AEROGENES   6-47 REPRESSOR PRCSA_ECOLI BIOSYNTHESISACTIVATION ESCHERICHIA COLI  170-197 PROTEIN A PRCSA_ERWAM BIOSYNTHESISACTIVATION ERWINIA AMYLOVORA  92-119  174-201 PROTEIN A PRCSA_ERWSTBIOSYNTHESIS ACTIVATION ERWINIA STEWARTII  174-201 PROTEIN A PRCSA_KLEAEBIOSYNTHESIS ACTIVATION KLEBSIELLA AEROGENES  168-205 PROTEIN APRCSB_ECOLI CAPSULE SYNTHESIS B ESCHERICHIA COLI  14-41  159-186COMPONENT PREC2_LEGPN RECA PROTEIN LEGIONELLA PNEUMOPHILA  262-310PRECA_ACHLA RECA PROTEIN ACHOLEPLASMA LAIDLAWII  283-310 PRECA_AGRTURECA PROTEIN AGROBACTERIUM TUMEFACIENS   3-30  132-159  281-308PRECA_ANAVA RECA PROTEIN ANABAENA VARIABILIS  322-349 PRECA_AQUPY RECAPROTEIN AQUIFEX PYROPHILUS  63-90  126-153 PRECA_BACFR RECA PROTEINBACTEROIDES FRAGILIS  108-135 PRECA_BACSU RECE PROTEIN BACILLUS SUBTILIS 267-294 PRECA_BRUAB RECA PROTEIN BRUCELLA ABORTUS   3-30  132-159 280-307 PRECA_BURCE RECA PROTEIN BURKHOLDERIA CEPACIA  75-109PRECA_ERWCA RECA PROTEIN ERWINIA CAROTOVORA  284-311 PRECA_LACDE RECAPROTEIN LACTOBACILLUS DELBRUECKII  20-47 PRECA_LACHE RECA PROTEINLACTOBACILLUS HELVETICUS  20-47 PRECA_LACLA RECA PROTEIN LACTOCOCCUSLACTIS  135-162  232-269  288-315 PRECA_METCL RECA PROTEIN METHYLOMONASCLARA  266-303 PRECA_METFL RECA PROTEIN METHYLOBACILLUS FLAGELLATUM 276-303 PRECA_MYCPU RECA PROTEIN MYCOPLASMA PULMONIS  30-57 PRECA_MYCTURECA PROTEIN MYCOBACTERIUM TUBERCULOSIS  749-776 PRECA_NEIGO RECAPROTEIN NEISSERIA GONORRHOEAE  263-310 PRECA_PROMI RECA PROTEIN PROTEUSMIRABILIS  283-310 PRECA_PSEAE RECA PROTEIN PSEUDOMONAS AERUGINOSA 282-309 PRECA_RHILP RECA PROTEIN RHIZOBIUM LEGUMINOSARUM   3-30 131-158  280-307 PRECA_RHILV RECA PROTEIN RHIZOBIUM LEGUMINOSARUM 119-146  268-295 PRECA_RHIME RECA PROTEIN RHIZOBIUM MELILOTI  119-146 268-295 PRECA_RHOSH RECA PROTEIN RHODOBACTER SPHAEROIDES  119-146PRECA_STRPN RECA PROTEIN STREPTOCOCCUS PNEUMONIAE  134-161  293-327PRECA_SYNP2 RECA PROTEIN SYNECHOCOCCUS SP  124-151 PRECA_VIBCH RECAPROTEIN VIBRIO CHOLERAE  290-317 PRECF_BACSU RECF PROTEIN BACILLUSSUBTILIS   4-31  178-205 PRECF_ECOLI RECF PROTEIN ESCHERICHIA COLI 82-109  147-174 PRECF_PROMI RECF PROTEIN PROTEUS MIRABILIS  86-113PRECF_PSEPU RECF PROTEIN PSEUDOMONAS PUTIDA  84-111 PRECF_SALTY RECFPROTEIN SALMONELLA TYPHIMURIUM  147-174 PRECJ_ECOLI EXONUCLEASE RECJESCHERICHIA COLI  52-79 PRECN_BACSU RECOMBINATION PROTEIN BACILLUSSUBTILIS  21-48  156-184  192-247  299-336  344-378 PRECQ_ECOLI DNAHELICASE RECQ ESCHERICHIA COLI  468-495 PRELA_ECOLI GTPPYROPHOSPHOKINASE ESCHERICHIA COLI  680-707 PREMA_BACSU REPLICATION ANDBACILLUS SUBTILIS   2-36  81-108 MAINTENANCE PROTEIN PREMA_STAAUREPLICATION AND STAPHYLOCOCCUS AUREUS   2-36  81-108 MAINTENANCE PROTEINPREMA_STAEP REPLICATION AND STAPHYLOCOCCUS EPIDERMIDIS   2-36  81-108MAINTENANCE PROTEIN PREP5_ECOLI REPLICATION PROTEIN REPA ESCHERICHIACOLI  50-77  90-117 PREPA_BACSU REPA PROTEIN BACILLUS SUBTILIS  342-373PREPA_ECOLI REPA PROTEIN ESCHERICHIA COLI  91-118  228-255 PREPA_NEIGOREPLICATION PROTEIN NEISSERIA GONORRHOEAE  57-84  138-172 PREPB_LACPLREPLICATION PROTEIN LACTOBACILLUS PLANTARUM  184-211 REPB PREPM_STAAUREPLICATION INITIATION STAPHYLOCOCCUS AUREUS  254-284 PROTEINPREPN_STAAU REPLICATION INITIATION STAPHYLOCOCCUS AUREUS  258-285PROTEIN PREPR_STRAG REPR PROTEIN STREPTOCOCCUS AGALACTIAE  430-467PREPS_STRPY REPS PROTEIN STREPTOCOCCUS PYOGENES  423-467 PREPX_STAAU REPPROTEIN STAPHYLOCOCCUS AUREUS  111-150  172-210 PREPY_ECOLI REPLICATIONINITIATION ESCHERICHIA COLI  288-315 PROTEIN PREP_CLOPE REPLICATIONPROTEIN CLOSTRIDIUM PERFRINGENS  168-195  297-324  343-375 PREP_ECOLIREP HELICASE ESCHERICHIA COLI  119-146  205-243 PREP_LACPL REP PROTEINLACTOBACILLUS PLANTARUM  119-199  260-287 PRESP_CLOPE RESOLVASECLOSTRIDIUM PERFRINGENS  68-102  151-185 PRF2_BACSU PROBABLE PEPTIDECHAIN BACILLUS SUBTILIS  34-68 RELEASE FACTOR 2 PRF2_ECOLI PEPTIDE CHAINRELEASE ESCHERICHIA COLI  86-113  163-204 FACTOR 2 PRF2_SALTY PEPTIDECHAIN RELEASE SALMONELLA TYPHIMURIUM  86-113  163-204 FACTOR 2PRF3_ECOLI PEPTIDE CHAIN RELEASE ESCHERICHIA COLI  180-210  443-473FACTOR 3 PRFAB_ECOLI 1,6-GALACTOSYL- ESCHERICHIA COLI  199-226TRANSFERASE PRFAG_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI  185-212RFAG PRFAJ_ECOLI 1,2-GLUCOSYLTRANSFERASE ESCHERICHIA COLI  39-66 233-268 PRFAJ_SALTY 1,2-GLUCOSYLTRANSFERASE SALMONELLA TYPHIMURIUM 68-95  145-172  236-263 PRFAK_SALTY 1,2-N-ACETYLGLUCOSAMINE- SALMONELLATYPHIMURIUM  335-369 TRANSFERASE PRFAL_ECOLI O-ANTIGEN LIGASEESCHERICHIA COLI  366-393 PRFAL_SALTY O-ANTIGEN LIGASE SALMONELLATYPHIMURIUM  326-360 PRFAP_ECOLI BIOSYNTHESIS PROTEIN RFAP ESCHERICHIACOLI   8-35 PRFAS_ECOLI BIOSYNTHESIS PROTEIN RFAS ESCHERICHIA COLI 62-89  184-240 PRFAY_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI  18-45RFAY PRFAZ_ECOLI BIOSYNTHESIS PROTEIN ESCHERICHIA COLI   3-30  85-112RFAZ PRFBB_SALTY DTDP-GLUCOSE 4,6- SALMONELLA TYPHIMURIUM  320-359DEHYDRATASE PRFBM_SALTY MANNOSE-1-PHOSPHATE SALMONELLA TYPHIMURIUM 313-361 GUANYLYLTRANSFERASE PRFBS_SALTI PARATOSE SYNTHASE SALMONELLATYPHI  22-56  205-232 PRFEA_VIBAN PRECURSOR FOR FERRIC VIBRIOANGUILLARUM  349-376 ANGUIBACTIN PRFH_ECOLI PEPTIDE CHAIN RELEASEESCHERICHIA COLI  83-110 FACTOR HOMOLOG PRG12_BACTU PUTATIVE G12SITE-SPECIFIC BACILLUS THURINGIENSIS  15-68  190-262  310-383RECOMBINASE PRHAB_ECOLI RHAMNULOKINASE ESCHERICHIA COLI  175-202PRHAB_SALTY RHAMNULOKINASE SALMONELLA TYPHIMURIUM  175-202 PRHAR_ECOLIL-RHAMNOSE OPERON ESCHERICHIA COLI  10-41 TRANSACTIVATOR PRHAS_ECOLIL-RHAMNOSE OPERON REG ESCHERICHIA COLI  152-179 PROTEIN RHAS PRHIR_RHILVRHIR REGULATORY PROTEIN RHIZOBIUM LEGUMINOSARUM  206-233 PRHLB_ECOLI RNAHELICASE RHLB/MMRA ESCHERICHIA COLI  138-165 PRHO_BORBU TRANS TERMFACTOR RHO BORRELIA BURGDORFERI  215-242  327-369 PRHPR_BACSU PROTEASEPROD REG BACILLUS SUBTILIS  82-109 PROTEIN HPR PRHSA_ECOLI RHSA PROTEINPRECURSOR ESCHERICHIA COLI  667-694 PRHSB_ECOLI RHSB PROTEIN PRECURSORESCHERICHIA COLI  667-694 PRHSC_ECOLI RHSC PROTEIN PRECURSOR ESCHERICHIACOLI  380-414  667-694 1056-1083 PRHSD_ECOLI RHSD PROTEIN PRECURSORESCHERICHIA COLI  671-712 1071-1098 PRHSE_ECOLI RHSE PROTEIN ESCHERICHIACOLI  345-372 PRIML_ECOLI ACETYLTRANSFERASE ESCHERICHIA COLI  93-127PRIR2_ECOLI RIBONUCLEOSIDE- ESCHERICHIA COLI  167-194 DIPHOSPHATEREDUCTASE PRISA_PHOLE RIBOFLAVIN SYNTHASE PHOTOBACTERIUM LEIOGNATHI  2-47  131-158 ALPHA CHAIN PRISB_BACSU RIBOFLAVIN SYNTHASE BACILLUSSUBTILIS   8-35 BETA CHAIN PRISB_PHOLE RIBOFLAVIN SYNTHASEPHOTOBACTERIUM LEIOGNATHI  14-41 BETA CHAIN PRL10_STRAT 50S RIBOSOMALPROTEIN L10 STREPTOMYCES ANTIBIOTICUS  14-72  106-133 PRL12_SYNY3 50SRIBOSOMAL PROTEIN L12 SYNECHOCYSTIS SP   2-34 PRL12_THEMA 50S RIBOSOMALPROTEIN L12 THERMOTOGA MARITIMA   8-35  56-86 PRL14_BACST 50S RIBOSOMALPROTEIN L14 BACILLUS STEAROTHERMOPHILUS  18-45 PRL14_MICLU 50S RIBOSOMALPROTEIN L14 MICROCOCCUS LUTEUS  18-45 PRL14_MYCCA 50S RIBOSOMAL PROTEINL14 MYCOPLASMA CAPRICOLUM  51-92 PRL15_BACLI 50S RIBOSOMAL PROTEIN L15BACILLUS LICHENIFORMIS  21-48 PRL15_BACST 50S RIBOSOMAL PROTEIN L15BACILLUS STEAROTHERMOPHILUS  95-134 PRL15_BACSU 50S RIBOSOMAL PROTEINL15 BACILLUS SUBTILIS  95-122 PRL15_CHLTR 50S RIBOSOMAL PROTEIN L15CHLAMYDIA TRACHOMATIS  110-144 PRL15_ECOLI 50S RIBOSOMAL PROTEIN L15ESCHERICHIA COLI  79-113 PRL15_LACLA 50S RIBOSOMAL PROTEIN L15LACTOCOCCUS LACTIS   8-35 PRL15_METVA 50S RIBOSOMAL PROTEIN L15METHANOCOCCUS VANNIELII  68-102 PRL15_MYCCA 50S RIBOSOMAL PROTEIN L15MYCOPLASMA CAPRICOLUM  63-135 PRL18_BACST 50S RIBOSOMAL PROTEIN L18BACILLUS STEAROTHERMOPHILUS  31-58 PRL18_CHLTR 50S RIBOSOMAL PROTEIN L18CHLAMYDIA TRACHOMATIS  32-86 PRL18_HALMA 50S RIBOSOMAL PROTEIN L18HALOARCULA MARISMORTUI  80-107 PRL18_MYCCA 50S RIBOSOMAL PROTEIN L18MYCOPLASMA CAPRICOLUM  61-88 PRL19_ECOLI 50S RIBOSOMAL PROTEIN L19ESCHERICHIA COLI  25-52 PRL19_HALMA 50S RIBOSOMAL PROTEIN L19 HALOARCULAMARISMORTUI  101-128 PRL19_METVA PROBABLE 50S RIBOSOMAL METHANOCOCCUSVANNIELII  45-72 PROTEIN PRL1_PROVU 50S RIBOSOMAL PROTEIN L1 PROTEUSVULGARIS  159-194 PRL1_SULSO 50S RIBOSOMAL PROTEIN L1 SULFOLOBUSSOLFATARICUS   5-32  184-211 PRL20_ECOLI 50S RIBOSOMAL PROTEIN L20ESCHERICHIA COLI  14-41 PRL20_MYCFE 50S RIBOSOMAL PROTEIN L20 MYCOPLASMAFERMENTANS  14-41 PRL21_BACSU 50S RIBOSOMAL PROTEIN L21 BACILLUSSUBTILIS   4-38 PRL22_ECOLI 50S RIBOSOMAL PROTEIN L22 ESCHERICHIA COLI 28-55 PRL23_METVA 50S RIBOSOMAL PROTEIN L23 METHANOCOCCUS VANNIELII 30-57 PRL23_MYCCA 50S RIBOSOMAL PROTEIN L23 MYCOPLASMA CAPRICOLUM 32-59 PRL24_HALMA 50S RIBOSOMAL PROTEIN L24 HALOARCULA MARISMORTUI 48-75 PRL24_METVA 50S RIBOSOMAL PROTEIN L24 METHANOCOCCUS VANNIELII 61-90 PRL24_MICLU 50S RIBOSOMAL PROTEIN L24 MICROCOCCUS LUTEUS  36-63PRL29_CHLTR 50S RIBOSOMAL PROTEIN L29 CHLAMYDIA TRACHOMATIS  39-66PRL29_ECOLI 50S RIBOSOMAL PROTEIN L29 ESCHERICHIA COLI  36-63PRL29_MYCCA 50S RIBOSOMAL PROTEIN L29 MYCOPLASMA CAPRICOLUM  39-85PRL4_BACST 50S RIBOSOMAL PROTEIN L4 BACILLUS STEAROTHERMOPHILUS  141-168PRL4_MYCCA 50S RIBOSOMAL PROTEIN L4 MYCOPLASMA CAPRICOLUM  144-198PRL5_THETH 50S RIBOSOMAL PROTEIN L5 THERMUS AQUATICUS  38-65 PRL6_BACST50S RIBOSOMAL PROTEIN L6 BACILLUS STEAROTHERMOPHILUS  79-106 PRL6_ECOLI50S RIBOSOMAL PROTEIN L6 ESCHERICHIA COLI  19-46 PRL6_METVA 50SRIBOSOMAL PROTEIN L6 METHANOCOCCUS VANNIELII  129-159 PRL9_BACST 50SRIBOSOMAL PROTEIN L9 BACILLUS STEAROTHERMOPHILUS  47-77 PRL9_ECOLI 50SRIBOSOMAL PROTEIN L9 ESCHERICHIA COLI  122-149 PRLA0_HALCU ACIDICRIBOSOMAL PROTEIN HALBACTERIUM CUTIRUBRUM  138-182 P0 HOMOLOGPRLA0_HALHA ACIDIC RIBOSOMAL PROTEIN HALOBACTERIUM HALOBIUM  138-182 P0HOMOLOG PRLA0_HALMA ACIDIC RIBOSOMAL PROTEIN HALOARCULA MARISMORTUI 64-91  153-184 P0 HOMOLOG PRLA0_METVA ACIDIC RIBOSOMAL PROTEINMETHANOCOCCUS VANNIELII  194-221 P0 HOMOLOG PRLA_HALEU RIBOSOMAL PROTEIN‘A’ HALOPHILIC EUBACTERIUM  59-86 NRCC 41227 PRLA_HALHA 50S RIBOSOMALPROTEIN L20 HALOBACTERIUM HALOBIUM   2-29 PRLA_HALMA 50S RIBOSOMALPROTEIN L12 HALOARCULA MARISMORTUI   2-29 PRLA_METVA RIBOSOMAL PROTEIN‘A’ METHANOCOCCUS VANNIELII   2-29 PRLA_MICLU 50S RIBOSOMAL PROTEIN MAMICROCOCCUS LUTEUS  55-82  90-117 PRLX1_SALTY 43 KD RELAXATION PROTEINSALMONELLA TYPHIMURIUM  226-260 PRLX1_STAAU RLX PROTEIN STAPHYLOCOCCUSAUREUS   3-30  102-132  177-218  266-300 PRLX2_SALTY 22 KD RELAXATIONPROTEIN SALMONELLA TYPHIMURIUM  19-53 PRLX2_STAAU RLX PROTEINSTAPHYLOCOCCUS AUREUS   3-30  102-133  261-295 PRLX3_STAAU RLX PROTEINSTAPHYLOCOCCUS AUREUS   3-30  146-216 PRLX_SULSO 50S RIBOSOMAL PROTEINLX SULFOLOBUS SOLFATARICUS  32-62 PRNBR_BACAM RIBONUCLEASE PRECURSORBACILLUS AMYLOLIQUEFACIENS  33-67  129-156 PRNC_ECOLI RIBONUCLEASE IIIESCHERICHIA COLI  10-37  117-144 PRNE_ECOLI RIBONUCLEASE E ESCHERICHIACOLI  413-440  628-662 PRNPA_BUCAP RIBONUCLEASE P PROTEIN BUCHNERAAPHIDICOLA  85-114 COMPONENT PRNPH_BACSU RIBONUCLEASE PH BACILLUSSUBTILIS  159-186 PRNS_ECOLI REGULATORY PROTEIN RNS ESCHERICHIA COLI 116-160 PRN_BACCI RIBONUCLEASE BACILLUS CIRCULANS  82-109 PRN_BACINRIBONUCLEASE PRECURSOR BACILLUS INTERMEDIUS  38-72 PRP28_BACTK RNAPOLYMERASE SIGMA-28 BACILLUS THURINGIENSIS  73-107 FACTOR PRECURSORPRP32_CITFR RNA POLYMERASE SIGMA-32 CITROBACTER FREUNDII  30-57 FACTORPRP35_BACTK RNA POLYMERASE SIGMA-35 BACILLUS THURINGIENSIS   8-35  63-90FACTOR PRECURSOR PRP54_ALCEU RNA POLYMERASE SIGMA-54 ALCALIGENESEUTROPHUS  229-266 FACTOR PRP54_AZOCA RNA POLYMERASE SIGMA-54AZORHIZOBIUM CAULINODANS  174-208 FACTOR PRP54_BACSU RNA POLYMERASESIGMA-54 BACILLUS SUBTILIS  16-43  97-124  274-308  396-423 FACTORPRP54_BRAJA RNA POLYMERASE SIGMA-54 BRADYRHIZOBIUM JAPONICUM  97-124FACTOR 1 PRP54_KLEPN RNA POLYMERASE SIGMA-54 KLEBSIELLA PNEUMONIAE 148-182 FACTOR PRP54_RHOCA RNA POLYMERASE SIGMA-54 RHODOBACTERCAPSULATUS  155-185 FACTOR PRP55_BRAJA RNA POLYMERASE SIGMA-54BRADYRHIZOBIUM JAPONICUM  145-172 FACTOR 2 PRP5M_ALCEU PROBABLE SIGMA(54) ALCALIGENES EUTROPHUS  21-51 MODULATION PROTEIN PRP5M_ECOLIPROBABLE SIGMA (54) ESCHERICHIA COLI  21-67 MODULATION PROTEINPRP5M_SALTY PROBABLE SIGMA (54) SALMONELLA TYPHIMURIUM  21-67 MODULATIONPROTEIN PRP70_BUCAP RNA POLYMERASE SIGMA-70 BUCHNERA APHIDICOLA  69-96 109-136  173-217  228-255  303-337 FACTOR PRP70_CHLTR RNA POLYMERASESIGMA-70 CHLAMYDIA TRACHOMATIS   5-32 FACTOR PRP70_ECOLI RNA POLYMERASESIGMA-70 ESCHERICHIA COLI  327-361 FACTOR PRP70_PSEAE RNA POLYMERASESIGMA-70 PSEUDOMONAS AERUGINOSA  334-368 FACTOR PRP70_RICPR RNAPOLYMERASE SIGMA-70 RICKETTSIA PROWAZEKII  244-321  348-382 FACTORPRP80_MYXXA RNA POLYMERASE SIGMA-80 MYXOCOCCUS XANTHUS  208-235  318-347 359-386 FACTOR PRPCF_SYNPY BILIN BIOSYNTHESIS SYNECHOCOCCUS SP  180-207PROTEIN RPCF PRPOA_BACSU DNA-DIRECTED RNA BACILLUS SUBTILIS  55-107POLYMERASE ALPHA CHAIN PRPOA_ECOLI A-DIRECTED RNA ESCHERICHIA COLI & 57-105 POLYMERASE ALPHA CHAIN SALMONELLA TYPHIMURIUM PRPOA_HALHADNA-DIRECTED RNA HALOBACTERIUM HALOBIUM  863-904 POLYMERASE SUBUNIT APRPOA_HALMO A-DIRECTED RNA HALOCOCCUS MORRHUAE  229-270 POLYMERASESUBUNIT A PRPOA_METTH DNA-DIRECTED RNA METHANOBACTERIUM  218-245 486-513  642-669 POLYMERASE SUBUNIT A THERMOAUTOTROPHICU PRPOA_SULACDNA-DIRECTED RNA SULFOLOBUS ACIDOCALDARIUS  222-256  500-527  693-720POLYMERASE SUBUNIT A PRPOA_THECE DNA-DIRECTED RNA THERMOCOCCUS CELER 228-262 POLYMERASE SUBUNIT A′ PRPOB_ECOLI DNA-DIRECTED RNA ESCHERICHIACOLI  599-626 1011-1038 POLYMERASE BETA CHAIN PRPOB_MYCLE DNA-DIRECTEDRNA MYCOBACTERIUM LEPRAE  723-760 1084-1111 POLYMERASE BETA CHAINPRPOB_SALTY A-DIRECTED RNA SALMONELLA TYPHIMURIUM  599-626  958-9851011-1038 POLYMERASE BETA CHAIN PRPOB_SULAC A-DIRECTED RNA SULFOLOBUSACIDOCALDARIUS  160-187  255-282  534-561  827-861 POLYMERASE SUBUNIT BPRPOB_THEMA A-DIRECTED RNA THERMOTOGA MARITIMA  350-377 POLYMERASE BETACHAIN PRPOC_ANASP DNA-DIRECTED RNA ANABAENA SP  152-194 POLYMERASE GAMMACHAIN PRPOC_ECOLI DNA-DIRECTED RNA ESCHERICHIA COLI  786-813  948-9941223-1257 POLYMERASE BETA CHAIN PRPOC_HALHA DNA-DIRECTED RNAHALOBACTERIUM HALOBIUM  175-202 POLYMERASE SUBUNIT C PRPOC_HALMODNA-DIRECTED RNA HALOCOCCUS MORRHUAE  27-54  117-144  207-234 POLYMERASESUBUNIT C PRPOC_METTH DNA-DIRECTED RNA METHANOBACTERIUM  58-85  272-302 327-354 POLYMERASE SUBUNIT C THERMOAUTOTROPHICU PRPOC_MYCLE A-DIRECTEDRNA MYCOBACTERIUM LEPRAE  273-300  860-887  911-938 1131-1158 POLYMERASEBETA′ CHAIN PRPOC_NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE  150-192POLYMERASE GAMMA CHAIN PRPOC_SULAC DNA-DIRECTED RNA SULFOLOBUSACIDOCALDARIUS  36-63  172-214  224-251 POLYMERASE SUBUNIT C PRPOC_THECEDNA-DIRECTED RNA THERMOCOCCUS CELER  21-58 POLYMERASE SUBUNIT A″PRPOD_NOSCO DNA-DIRECTED RNA NOSTOC COMMUNE  72-116  402-449  539-566POLYMERASE DELTA CHAIN PRPOE_ECOLI RNA POLYMERASE SIGMA-E ESCHERICHIACOLI   5-39 FACTOR PRPOS_ECOLI RNA POLYMERASE SIGMA ESCHERICHIA COLI 281-308 FACTOR KATF PRPOU_HALHA DNA-DIRECTED RNA HALOBACTERIUM HALOBIUM 91-118 POLYMERASE SUBUNIT B′ PRPSA_AGRTU RNA POLYMERASE SIGMA-AAGROBACTERIUM TUMEFACIENS  310-347  397-427 FACTOR PRPSA_ANASP RNAPOLYMERASE SIGMA-A ANABAENA SP  71-105 FACTOR PRPSA_CLOAB RNA POLYMERASESIGMA-A CLOSTRIDIUM ACETOBUTYLICUM   2-29 FACTOR PRPSA_STRAU RNAPOLYMERASE SIGMA STREPTOMYCES AUREOFACIENS  278-305 FACTOR RPODPRPSB_ANASP RNA POLYMERASE SIGMA-B ANABAENA SP   4-31 FACTOR PRPSB_BACSURNA POLYMERASE SIGMA-B BACILLUS SUBTILIS   5-35  169-196  200-230 FACTORPRPSB_MYXXA RNA POLYMERASE SIGMA-B MYXOCOCCUS XANTHUS  47-74 FACTORPRPSB_STIAU RNA POLYMERASE SIGMA-B STIGMATELLA AURANTIACA  96-123 FACTORPRPSC_ANASP RNA POLYMERASE SIGMA-C ANABAENA SP  58-85 FACTOR PRPSD_BACSURNA POLYMERASE SIGMA-D BACILLUS SUBTILIS  192-249 FACTOR PRPSE_BACSU RNAPOLYMERASE SIGMA-E BACILLUS SUBTILIS  63-90 FACTOR PRECURSOR PRPSE_CLOABRNA POLYMERASE SIGMA-E CLOSTRIDIUM ACETOBUTYLICUM  14-41  116-160 FACTORPRPSF_BACLI RNA POLYMERASE SIGMA-F BACILLUS LICHENIFORMIS   4-31 191-248 FACTOR PRPSF_BACME RNA POLYMERASE SIGMA-F BACILLUS MEGATERIUM 191-225 FACTOR PRPSF_BACSU RNA POLYMERASE SIGMA-F BACILLUS SUBTILIS  4-31  191-248 FACTOR PRPSH_BACLI RNA POLYMERASE SIGMA-H BACILLUSLICHENIFORMIS  191-218 FACTOR PRPSH_BACSU RNA POLYMERASE SIGMA-HBACILLUS SUBTILIS  186-213 FACTOR PRPSK_BACSU RNA POLYMERASE SIGMA-KBACILLUS SUBTILIS  75-109  189-216 FACTOR PRPSP_STAAU RNA POLYMERASESIGMA STAPHYLOCOCCUS AUREUS  19-46 FACTOR PLAC PRPSW_STRCO RNAPOLYMERASE SIGMA STREPOMYCES COELICOLOR  232-273 FACTOR WHIG PRPSX_BACTKPOSSIBLE RNA POLYMERASE BACILLUS THURINGIENSIS  33-60 SIGMA-G FACTORPRS10_ECOLI 30S RIBOSOMAL PROTEIN S10 ESCHERICHIA COLI   3-30PRS11_BACSU 30S RIBOSOMAL PROTEIN S11 BACILLUS SUBTILIS   8-42PRS13_BACSU 30S RIBOSOMAL PROTEIN S13 BACILLUS SUBTILIS  44-85PRS17_METVA 30S RIBOSOMAL PROTEIN S17 METHANOCOCCUS VANNIELII  34-73PRS1_ECOLI 30S RIBOSOMAL PROTEIN S1 ESCHERICHIA COLI  99-126  144-171PRS1_PROSP 30S RIBOSOMAL PROTEIN S1 PROVIDENCIA SP  39-66  265-292 349-376 PRS1_RHIME 30S RIBOSOMAL PROTEIN S1 RHIZOBIUM MELILOTI  91-125 172-217 PRS21_BACST 30S RIBOSOMAL PROTEIN S21 BACILLUSSTEAROTHERMOPHILUS   1-28 PRS2_SPICI 30S RIBOSOMAL PROTEIN S2SPIROPLASMA CITRI  91-125 PRS3_ACHLA 30S RIBOSOMAL PROTEIN S3ACHOLEPLASMA LAIDLAWII  83-110 PRS3_MYCCA 30S RIBOSOMAL PROTEIN S3MYCOPLASMA CAPRICOLUM  77-106  136-163 PRS4_ECOLI 30S RIBOSOMAL PROTEINS4 ESCHERICHIA COLI  50-77 PRS5_HALMA 30S RIBOSOMAL PROTEIN S5HALOARCULA MARISMORTUI  160-187 PRS5_MYCCA 30S RIBOSOMAL PROTEIN S5MYCOPLASMA CAPRICOLUM  35-62  182-216 PRS6_THETH 30S RIBOSOMAL PROTEINS6 THERMUS AQUATICUS  16-43 PRS7_METVA 30S RIBOSOMAL PROTEIN S7METHANOCOCCUS VANNIELII  69-96 PRS7_MYCLE 30S RIBOSOMAL PROTEIN S7MYCOBACTERIUM LEPRAE  22-49 PRS8_MICLU 30S RIBOSOMAL PROTEIN S8MICROCOCCUS LUTEUS  103-130 PRS8_MYCCA 30S RIBOSOMAL PROTEIN S8MYCOPLASMA CAPRICOLUM  41-78 PRSGA_ECOLI FERRITIN LIKE PROTEINESCHERICHIA COLI  80-107 PRT67_ECOLI RNA-DIRECTED DNA ESCHERICHIA COLI 225-268 POLYMERASE PSACB_BACAM LEVANSUCRASE PRECURSOR BACILLUSAMYLOLIQUEFACIENS  175-202  254-281 PSACB_BACSU LEVANSUCRASE PRECURSORBACILLUS SUBTILIS  175-202  254-288 PSACB_STRMU LEVANSUCRASE PRECURSORSTREPTOCOCCUS MUTANS  31-65  155-189  314-369 PSACQ_BACLI SACQREGULATORY FACTOR BACILLUS LICHENIFORMIS   2-46 PSACT_BACSU SACPA OPERONANTI- BACILLUS SUBTILIS  102-129  189-216 TERMINATOR PSAGP_STRPYSTREPTOCOCCAL ACID STREPTOCOCCUS PYOGENES  294-331  362-389 GLYCOPROTEINPSAOX_BACSN SARCOSINE OXIDASE BACILLUS SP  350-377 PSAS2_CLOBI SPOREPROTEIN CLOSTRIDIUM BIFERMENTANS  17-47 PSASG_BACCE SPORE PROTEIN GAMMA-BACILLUS CEREUS  31-58 TYPE PSASG_BACST SPORE PROTEIN GAMMA- BACILLUSSTEAROTHERMOPHILUS  37-64 TYPE PSBCC_ECOLI EXONUCLEASE SBCC ESCHERICHIACOLI  218-260  337-364  535-585  622-656  778-812  821-865  915-942PSBCD_ECOLI EXONUCLEASE SBCD ESCHERICHIA COLI  137-164  334-397PSBM_ECOLI SBM PROTEIN ESCHERICHIA COLI   5-32  436-470  553-580PSBP_BACSU SBP PROTEIN BACILLUS SUBTILIS  28-55 PSCPA_STRPY C5APEPTIDASE PRECURSOR STREPTOCOCCUS PYOGENES  126-160  784-811  831-880PSCRB_KLEPN SUCROSE-6-PHOSPHATE KLEBSIELLA PNEUMONIAE  174-201 HYDROLASEPSCRB_LACLA SUCROSE-6-PHOSPHATE LACTOCOCCUS LACTIS  182-217  354-385 395-422 HYDROLASE PSCRB_STRMU SUCROSE-6-PHOSPHATE STREPTOCOCCUS MUTANS 335-362 HYDROLASE PSCRK_SALTH FRUCTOKINASE SALMONELLA THOMPSON  97-124PSCRK_SALTY FRUCTOKINASE SALMONELLA TYPHIMURIUM  183-210 PSCRY_KLEPNSUCROSE PORIN PRECURSOR KLEBSIELLA PNEUMONIAE  61-88  240-267PSCRY_SALTY SUCROSE PORIN PRECURSOR SALMONELLA TYPHIMURIUM  16-54  61-88 240-267 PSECA_BACSU PREPROTEIN TRANSLOCASE BACILLUS SUBTILIS  12-39 226-260 SECA SUBUNIT PSECA_ECOLI PREPROTEIN TRANSLOCASE ESCHERICHIACOLI  360-387  453-481 SECA SUBUNIT PSECB_ECOLI PROTEIN-EXPORT PROTEINESCHERICHIA COLI  41-68 SECB PSECD_ECOLI PROTEIN-EXPORT ESCHERICHIA COLI 46-73  378-412 MEMBRANE PROTEIN SECD PSECF_ECOLI PROTEIN-EXPORTESCHERICHIA COLI  174-201 MEMBRANE PROTEIN SECF PSECY_ECOLI PREPROTEINTRANSLOCASE ESCHERICHIA COLI  101-128 SECY SUBUNIT PSECY_LACLAPREPROTEIN TRANSLOCASE LACTOCOCCUS LACTIS  403-430 SECY SUBUNITPSECY_METVA PREPROTEIN TRANSLOCASE METHANOCOCCUS VANNIELII  131-161 396-423 SECY SUBUNIT PSECY_STACA PREPROTEIN TRANSLOCASE STAPHYLOCOCCUSCARNOSUS  149-191 SECY SUBUNIT PSEFC_SALEN SEFC PROTEIN PRECURSORSALMONELLA ENTERITIDIS  137-164  475-535 PSERA_BACSUD-3-PHOSPHOGLYCERATE BACILLUS SUBTILIS  16-43  347-374 DEHYDROGENASEPSFAA_ECOLI S-FIMBRIAL PROTEIN ESCHERICHIA COLI  11-38 SUBUNIT PRECURSORPSFSA_ECOLI SUGAR FERMENTATION ESCHERICHIA COLI  81-115 STIMULATIONPROTEIN PSFUA_SERMA IRON-TRANSPORT SFUA SERRATIA MARCESCENS  34-61PROTEIN PRECURSOR PSHU1_ECOLI SHUFFLON PROTEIN A ESCHERICHIA COLI 224-262 PSHU2_ECOLI SHUFFLON PROTEIN A′ ESCHERICHIA COLI  224-262PSHU3_ECOLI SHUFFLON PROTEIN B ESCHERICHIA COLI  224-262 PSHU4_ECOLISHUFFLON PROTEIN B′ ESCHERICHIA COLI  224-262 PSHU5_ECOLI SHUFFLONPROTEIN C ESCHERICHIA COLI  224-262  402-429 PSHU6_ECOLI SHUFFLONPROTEIN C′ ESCHERICHIA COLI  224-262 PSHU7_ECOLI SHUFFLON PROTEIN D′ESCHERICHIA COLI  224-262 PSINR_BACLI SINR PROTEIN BACILLUSLICHENIFORMIS   9-36  43-80 PSINR_BACSU SINR PROTEIN BACILLUS SUBTILIS  9-36  43-70 PSLAP_ACEKI CELL SURFACE PROTEIN ACETOGENIUM KIVUI 237-264  282-309  313-453  458-489  517-544  563-593  641-685  726-753PRECURSOR PSLPA_ECOLI PROPHAGE CP4-57 ESCHERICHIA COLI  93-136 INTEGRASEPSMF_ECOLI SMF PROTEIN ESCHERICHIA COLI  24-51 PSMPB_ECOLI SMALL PROTEINB ESCHERICHIA COLI  27-61  90-117 PSMP_ECOLI SMP PROTEIN PRECURSORESCHERICHIA COLI  71-98 PSMTB_SYNP7 TRANSCRIPTIONAL SYNECHOCOCCUS SP 62-96 REPRESSOR SMTB PSODF_COXBU SUPEROXIDE DISMUTASE COXIELLA BURNETII 116-143 PSODF_ECOLI SUPEROXIDE DISMUTASE ESCHERICHIA COLI  115-142PSODF_METTH SUPEROXIDE DISMUTASE METHANOBACTERIUM  25-52THERMOAUTOTROPHICU PSODF_PHOLE SUPEROXIDE DISMUTASE PHOTOBACTERIUMLEIOGNATHI  22-63 PSODM_PROFR SUPEROXIDE DISMUTASE PROPIONIBACTERIUM 164-191 FREUDENREICHII PSOHB_ECOLI SOHB PROTEIN PRECURSOR ESCHERICHIACOLI   7-48  70-97  273-300 PSOPB_ECOLI SOPB PROTEIN ESCHERICHIA COLI 252-279 PSOXR_ECOLI SOXR PROTEIN ESCHERICHIA COLI  16-63 PSP0J_BACSUSTAGE 0 SPORULATION BACILLUS SUBTILIS  131-158 PROTEIN J PSP2A_BACMESTAGE II SPORULATION BACILLUS MEGATERIUM  19-53 PROTEIN AA PSP2A_BACSUSTAGE II SPORULATION BACILLUS SUBTILIS  21-55 PROTEIN AA PSP2B_BACLISTAGE II SPORULATION BACILLUS LICHENIFORMIS  42-69 PROTEIN ABPSP2B_BACME STAGE II SPORULATION BACILLUS MEGATERIUM  36-73 PROTEIN ABPSP2D_BACSU STAGE II SPORULATION BACILLUS SUBTILIS  134-161 PROTEIN DPSP2G_BACTK POSSIBLE ASPARTYL BACILLUS THURINGIENSIS   4-36  117-144PROTEASE PSP2J_BACSU STAGE II SPORULATION BACILLUS SUBTILIS  14-44 463-500 PROTEIN J PSP3D_BACSU STAGE III SPORULATION BACILLUS SUBTILIS  9-36  52-86 PROTEIN D PSP3J_BACSU STAGE III SPORULATION BACILLUSSUBTILIS  44-75 PROTEIN J PRECURSOR PSP4A_BACSU STAGE IV SPORULATIONBACILLUS SUBTILIS  139-180 PROTEIN A PSP4B_BACSU STAGE IV SPORULATIONBACILLUS SUBTILIS  39-66 PROTEIN B PSP4G_BACSU STAGE IV SPORULATIONBACILLUS SUBTILIS  251-278 PROTEIN FB PSP5A_BACSU STAGE V SPORULATIONBACILLUS SUBTILIS   9-36 PROTEIN AF PSPAA_STRDO ANTIGEN I STREPTOCOCCUSDOWNEI  184-218 PSPAB_BACSU SUBTILIN BIOSYNTHESIS BACILLUS SUBTILIS 181-208 117 KD PROTEIN PSPAC_BACSU SUBTILIN BIOSYNTHESIS BACILLUSSUBTILIS  311-338 PROTEIN SPAC PSPAK_BACSU SENSOR PROTEIN SPAK BACILLUSSUBTILIS  80-107  224-251  290-324 PSPAP_STRMU CELL SURFACE ANTIGEN I/STREPTOCOCCUS MUTANS  122-276  281-465  538-565  576-630 1071-10981155-1182 1377-1430 II PRECURSOR PSPAR_BACSU REGULATORY PROTEIN BACILLUSSUBTILIS   4-31  172-199 PSPAT_BACSU SUBTILIN TRANSPORT BACILLUSSUBTILIS  55-82  226-267 PROTEIN SPAT PSPEC_STRPY EXOTOXIN TYPE CSTREPTOCOCCUS PYOGENES  12-39 PRECURSOR PSPIR_SPICI SPIRALIN SPIROPLASMACITRI  82-109  155-182 PSPIR_SPIME SPIRALIN SPIROPLASMA MELLIFERUM 195-222 PSPOT_ECOLI GUAN-3′,5′-BIS(DIPHOS) 3′- ESCHERICHIA COLI 637-664 PYROPHOSPHOHYDROLA PSPPA_ECOLI PROTEASE IV ESCHERICHIA COLI 278-305 PSQHC_ZYMMO SQUALENE-HOPENE CYCLASE ZYMOMONAS MOBILIS  590-617PSRFA_BACSU SURFACTIN SYNTHETASE BACILLUS SUBTILIS  159-186  244-271SUBUNIT A PSRP5_ECOLI SIGNAL RECOGNITION ESCHERICHIA COLI  301-328PARTICLE PROTEIN PSRP5_MYCMY SIGNAL RECOGNITION MYCOPLASMA MYCOIDES 21-65  107-141  394-428 PARTICLE PROTEIN PSSA1_PASHA SEROTYPE-SPECIFICANTIGEN PASTEURELLA HAEMOLYTICA  151-178  358-385  465-518  529-570 860-904 1 PRECURSOR PSSAB_STRPA ADHESIN B PRECURSOR STREPTOCOCCUSPARASANGUIS  32-59 PSSAB_STRSA ADHESIN B PRECURSOR STREPTOCOCCUS SANGUIS 21-59  101-128 PSSB_ECOLI SINGLE-STRAND BINDING ESCHERICHIA COLI  68-95PROTEIN PSSB_PROMI SINGLE-STRAND BINDING PROTEUS MIRABILIS  63-104PROTEIN PSSB_SERMA SINGLE-STRAND BINDING SERRATIA MERCESCENS  63-104PROTEIN PSSP5_STRSA AGGLUTININ RECEPTOR STREPTOCOCCUS SANGUIS  131-173 178-287  295-483  565-592  676-710 1081-1131 PRECURSOR PSTAV_STRAVSTREPTAVIDIN PRECURSOR STREPTOMYCES AVIDINII  125-152 PSTA_ECOLISTREPTOTHRICIN ACETYL- ESCHERICHIA COLI  66-93 TRANSFERASE PSTC1_STAAUSTAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS  90-119  172-199  280-311PRECURSOR PSTC2_STAAU STAPHYLOCOAGULASE STAPHYLOCOCCUS AUREUS  90-117 264-291 PRECURSOR PSTC_CLOBE L-TRANSD TRANSC CONTROL CLOSTRIDIUMBEIJERINCKII  47-74 PROTEIN PSTPA_ECOLI STPA PROTEIN ESCHERICHIA COLI 36-63 PSTR1_STRGR INOSAMINE-PHOSPHATE STREPTOMYCES GRISEUS  183-210AMIDINOTRANSFERASE 1 PSTRP_STREQ STREPTOKINASE C STREPTOCOCCUSEQUISIMILIS  209-236  281-308 PRECURSOR PSTRP_STRPY STREPTOKINASE ASTREPTOCOCCUS PYOGENES  209-236 PRECURSOR PSTRP_STRSP STREPTOKINASE GSTREPTOCOCCUS SP  209-236  281-308 PRECURSOR PSUBE_BACSU MINOREXTRACELLULAR BACILLUS SUBTILIS  435-462  522-563  605-639 PROTEASE EPRPREC PSUBF_BACSU BACILLOPEPTIDASE F BACILLUS SUBTILIS  40-67  89-116 121-148  554-597 PRECURSOR PSUBI_SALTY SULFATE-BINDING PROTEINSALMONELLA TYPHIMURIUM  37-74 PSUBI_SYNP7 SULFATE-BINDING PROTEINSYNECHOCOCCUS SP  63-94 PRECURSOR PSUBI_SYNY3 SULFATE-BINDING PROTEINSYNECHOCYSTIS SP  64-91 PRECURSOR PSUBT_BACLI SUBTILISIN CARLSBERGBACILLUS LICHENIFORMIS  191-222 PRECURSOR PSUBT_BACMS SUBTILISINBACILLUS MESENTERICUS  91-118 PSUBT_BACS9 SUBTILISIN PRECURSOR BACILLUSSP  36-63  250-277 PSUBT_BACSA SUBTILISIN AMYLO- BACILLUS SUBTILIS 197-224 SACCHARITICUS PRECURSOR PSUBT_BACSD SUBTILISIN BACILLUSSUBTILIS  86-117 PSUBT_BACST SUBTILISIN J PRECURSOR BACILLUSSTEAROTHERMOPHILUS  197-224 PSUBT_BACSU SUBTILISIN E PRECURSOR BACILLUSSUBTILIS  197-224 PSUBV_BACSU MINOR EXTRACELLULAR BACILLUS SUBTILIS 55-108  613-654  741-768 PROTEASE VPR PRECUR PSUCC_ECOLI SUCCINYL-COASYNTHETASE ESCHERICHIA COLI  62-89 SYNTHETASE BETA PSUCP_AGRVI SUCROSEPHOSPHORYLASE AGROBACTERIUM VITIS  449-476 PSULA_ENTAE CELL DIVISIONINHIBITOR ENTEROBACTER AEROGENES  112-139 PSYA_ECOLI ALANYL-TRNASYNTHETASE ESCHERICHIA COLI  257-287  725-752  790-821 PSYD_ECOLIASPARTYL-TRNA ESCHERICHIA COLI  330-357 SYNTHETASE PSYE_BACSTGLUTAMYL-TRNA BACILLUS STEAROTHERMOPHILUS  49-76 SYNTHETASE PSYE_BACSUGLUTAMYL-TRNA BACILLUS SUBTILIS  49-76  351-386 SYNTHETASE PSYE_THETHGLUTAMYL-TRNA THERMUS AQUATICUS  405-432 SYNTHETASE PSYFA_BACSUPHENYLALANYL-TRNA BACILLUS SUBTILIS   7-34 SYNTHETASE A CHAINPSYFB_BACSU PHENYLALANYL-TRNA BACILLUS SUBTILIS  340-367  407-441SYNTHETASE BETA CHAIN PSYFB_ECOLI PHENYLALANYL-TRNA ESCHERICHIA COLI 546-573  607-634  744-771 SYNTHETASE BETA CHAIN PSYGB_ECOLI GLYCYL-TRNASYNTHETASE ESCHERICHIA COLI  354-381  487-514 BETA CHAIN PSYH_STREQHISTIDYL-TRNA SYNTHETASE STREPTOCOCCUS EQUISIMILIS  376-403 PSYI_METTHISOLEUCYL-TRNA METHANOBACTERIUM 1010-1037 SYNTHETASE THERMOAUTOTROPHICUPSYK1_ECOLI LYSYL-TRNA SYNTHETASE ESCHERICHIA COLI  283-310 PSYK2_ECOLILYSYL-TRNA SYNTHETASE, ESCHERICHIA COLI  45-72  283-310 HEAT INDUCIBLEPSYL_ECOLI LEUCYL-TRNA SYNTHETASE ESCHERICHIA COLI  220-247 PSYM_BACSTMETHIONYL-TRNA BACILLUS STEAROTHERMOPHILUS  69-99 SYNTHETASE PSYM_ECOLIMETHIONYL-TRNA ESCHERICHIA COLI  87-124 SYNTHETASE PSYP_ECOLIPROLYL-TRNA SYNTHETASE ESCHERICHIA COLI  541-568 PSYQ_ECOLIGLUTAMINYL-TRNA ESCHERICHIA COLI  394-421 SYNTHETASE PSYRD_PSESY SYRDPROTEIN PSEUDOMONAS SYRINGAE  449-483 PSYR_ECOLI ARGINYL-TRNA SYNTHETASEESCHERICHIA COLI  540-574 PSYT1_BACSU THREONYL-TRNA BACILLUS SUBTILIS 401-428  605-639 SYNTHETASE PSYV_BACST VALYL-TRNA SYNTHETASE BACILLUSSTEAROTHERMOPHILUS  603-630  809-843 PSYV_ECOLI VALYL-TRNA SYNTHETASEESCHERICHIA COLI  300-327  882-912  924-951 PSYW_BACST TRYPTOPHANYL-TRNABACILLUS STEAROTHERMOPHILUS  204-231  239-266 SYNTHETASE PSYY1_BACSUTYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS  81-115  375-409 1 PSYY2_BACSUTYROSYL-TRNA SYNTHETASE BACILLUS SUBTILIS  69-96 2 PSYY_BACCATYROSYL-TRNA SYNTHETASE BACILLUS CALDOTENAX  295-322  372-416 PSYY_BACSTTYROSYL-TRNA SYNTHETASE BACILLUS STEAROTHERMOPHILUS  295-322  372-416PT1M1_ECOLI ENZYME ECOR124/3 1 M ESCHERICHIA COLI  126-167  405-432 485-512 PROTEIN PT1R1_(—)ECOLI ENZYME ECOR124/3 R ESCHERICHIA COLI 30-57  624-651  702-736  768-795  843-870  966-1000 PROTEIN PT1R_ECOLIENZYME ECOK 1 R PROTEIN ESCHERICHIA COLI  158-263 PT1S1_ECOLI ENZYMEECOR124/3 I ESCHERICHIA COLI  154-181 SPECIFICITY PROTEIN PT1SA_ECOLIENZYME ECOA I SPECIFICITY ESCHERICHIA COLI  279-306 PROTEIN PT1SB_ECOLIENZYME ECOB I SPECIFICITY ESCHERICHIA COLI  278-312 PROTEIN PT1SD_ECOLIENZYME ECOD I SPECIFICITY ESCHERICHIA COLI  249-283 PROTEIN PT1SE_ECOLIENZYME ECOE I SPECIFICITY ESCHERICHIA COLI  279-306 PROTEIN PT1S_SALPOENZYME SPECIFICITY SALMONELLA POTSDAM  396-423 PROTEIN PT1S_SALTY ENZYMESPECIFICITY SALMONELLA TYPHIMURIUM  194-221  276-304  402-429 PROTEINPT257_ECOLI TYPE IIS RESTRICTION ESCHERICHIA COLI  138-196  265-295 406-440  639-682  687-728  926-954 ENZYME ECO571 PT2A1_ACICA TYPE IIRESTRICTION ACINETOBACTER CALCOACETICUS  49-76 ENZYME ACCI PT2BF_BACSUTYPE II RESTRICTION BACILLUS SUBTILIS   3-43  135-223  236-280 ENZYMEBSUFI PT2BR_BACSU TYPE II RESTRICTION BACILLUS SUBTILIS   3-45  338-384 401-430  532-559 ENZYME BSURI PT2C1_CITFR TYPE II RESTRICTIONCITROBACTER FREUNDII  35-62 ENZYME CFRBI PT2C1_HERAU TYPE II RESTRICTIONHERPETOSIPHON AURANTIACUS  176-215 ENZYME HGICI PT2C2_HERAU TYPE IIRESTRICTION HERPETOSIPHON AURANTIACUS  243-273 ENZYME HGICII PT2D1_DESDNTYPE II RESTRICTION DESULFOVIBRIO DESULFURICANS  85-122 ENZYME DDEIPT2D1_STRPN TYPE II RESTRICTION STREPTOCOCCUS PNEUMONIAE  213-240 ENZYMEDPNI PT2E1_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI   2-29 ENZYMEECORI PT2E2_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI  333-360 ENZYMEECORII PT2E5_ECOLI TYPE II RESTRICTION ESCHERICHIA COLI  128-155 214-241 ENZYME ECORV PT2F1_FLAOK TYPE IIS RESTRICTION FLAVOBACTERIUMOKEANOKOITES  302-336 ENZYME FOKI PT2H1_HAEIN TYPE II RESTRICTIONHAEMOPHILUS INFLUENZAE   6-38  69-96 ENZYME HINFI PT2H1_HAEPA TYPE IIRESTRICTION HAEMOPHILUS PARAINFLUENZAE  77-125 ENZYME HPAI PT2H2_HAEHATYPE II RESTRICTION HAEMOPHILUS HAEMOLYTICUS  23-50 ENZYME HHAIIPT2H2_HAEIN TYPE II RESTRICTION HAEMOPHILUS INFLUENZAE  97-138 ENZYMEHINCII PT2K1_KLEPN TYPE II RESTRICTION KLEBSIELLA PENUMONIAE  18-45 178-205 ENZYME KPNI PT2M1_MORBO TYPE II RESTRICTION MORAXELLA BOVIS 15-61  187-215  225-252 ENZYME MBOI PT2M2_MORBO TYPE IIS RESTRICTIONMORAXELLA BOVIS   3-30  158-185  337-364 ENZYME MBOII PT2MZ_METTFPOSSIBLE TYPE II METHANOBACTERIUM  105-151 RESTRICTION ENZYME MTHZITHERMOFORMICICUM PT2NG_NEIGO TYPE II RESTRICTION NEISSERIA GONORRHOEAE 117-144  231-258 ENZYME NGOPII PT2S1_STRSA TYPE II RESTRICTIONSTREPTOCOCCUS SANGUIS   5-32  41-68  395-446 ENZYME STSI PT2S2_SHISOTYPE II RESTRICTION SHIGELLA SONNEI  206-243  258-288 ENZYME SSOIIPT2S3_STAAU TYPE II RESTRICTION STAPHYLOCOCCUS AUREUS  70-102 ENZYMESAU3AI PT2SI_SALIN TYPE II RESTRICTION SALMONELLA INFANTIS  144-181ENZYME SINI PT2SM_SERMA TYPE II RESTRICTION SERRATIA MARCESCENS  61-88ENZYME SMAI PT2TA_THEAQ TYPE II RESTRICTION THERMUS AQUATICUS  147-181 203-237 ENZYME TAQI PT3MO_ECOLI SYSTEM ECOP15 ENZYME ESCHERICHIA COLI 37-71  75-102  236-296  378-405 MOD PT3RE_BACCE SYSTEM ENZYME RESBACILLUS CEREUS  62-89  256-283 PTA47_TREPA 47 KD MEMBRANE ANTIGENTREPONEMA PALLIDUM  26-53 PRECURSOR PTA53_TREDE 53 KD MEMBRANE ANTIGENTREPONEMA DENTICOLA  99-126  298-329 A PRECUSOR PTACY_BACAL ALVEOLYSINPRECURSOR BACILLUS ALVEI  272-302  374-401 PTACY_CLOPE PERFRINGOLYSIN OCLOSTRIDIUM PERFRINGENS  270-311  372-434 PRECURSOR PTACY_LISIVIVANOLYSIN PRECURSOR LISTERIA IVANOVII  93-120  167-195  396-423PTACY_LISMO LISTERIOLYSIN O LISTERIA MONOCYTOGENES  98-125  168-196 295-329  397-424 PRECURSOR PTACY_LISSE SEELIGERIOLYSIN LISTERIASEELIGERI  99-126  296-323  349-376  398-463 PRECURSOR PTACY_STRPNPNEUMOLYSIN STREPTOCOCCUS PNEUMONIAE  234-272 PTACY_STRPY STREPTOLYSIN OSTREPTOCOCCUS PYOGENES  86-133  355-382  440-470 PRECURSOR PTAGB_BACSUTECHOIC ACID BIOSYN BACILLUS SUBTILIS  42-69 PROTEIN B PREC PTAGC_BACSUTECHOIC ACID BIO- BACILLUS SUBTILIS  348-375 SYNTHESIS PROTEIN CPTAGE_BACSU TECHOIC ACID BIO- BACILLUS SUBTILIS  59-93  144-181  185-243 565-592  600-627 SYNTHESIS PROTEIN E PTAGF_BACSU TECHOIC ACID BIO-BACILLUS SUBTILIS  182-209 SYNTHESIS PROTEIN F PTBP1_NEIGOTRANSFERRIN-BINDING NEISSERIA GONORRHOEAE  39-73  127-164  398-425 810-841 PROTEIN 1 PRECURSOR PTBUD_PSEPI PHENOL 2-MONOOXYGENASEPSEUDOMONAS PICKETTII  38-65  227-254  375-402 PTCDT_SALTYTRANSCRIPTIONAL SALMONELLA TYPHIMURIUM  105-132 REGULATORY PROTEIN TCDTPTCPC_VIBCH MEMBRANE PROTEIN TCPC VIBRIO CHOLERAE  20-47  83-128 199-233  263-290  344-375  459-486 PRECURSOR PTCPE_VIBCH TCP PILUSBIOSYNTHESIS VIBRIO CHOLERAE  24-59  77-111 PROTEIN TCPE PTCPF_VIBCH TCPPILUS SECRETION VIBRIO CHOLERAE  32-66  211-238 PROTEIN TCPF PTCPH_VIBCHTCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  95-122 PROTEIN TCPH PTCIP_VIBCHTCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE  25-52  234-261  279-306  346-379PROTEIN TCPI PTCPN_VIBCH TCP PILUS VIRULENCE VIBRIO CHOLERAE  48-75REGULATORY PROTEIN PTCPO_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 230-257 PROTEIN TCPO PTCPY_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 121-148 PROTEIN TCPY PTCPZ_VIBCH TCP PILUS BIOSYNTHESIS VIBRIO CHOLERAE 44-85 PROTEIN TCPZ PTCR2_BACSU TETRACYCLINE RESISTANCE BACILLUSSUBTILIS  404-434 PROTEIN PTCR_BACST TETRACYCLINE RESISTANCE BACILLUSSTEAROTHERMOPHILUS  422-453 PROTEIN PTCR_STAAU TETRACYCLINE RESISTANCESTAPHYLOCOCCUS AUREUS  404-431 PROTEIN PTCR_STRAG TETRACYCLINERESISTANCE STREPTOCOCCUS AGALACTIAE  422-453 PROTEIN PTCR_STRPNTETRACYCLINE RESISTANCE STREPTOCOCCUS PNEUMONIAE  422-453 PROTEINPTDCA_ECOLI TDCABC OPERON TRANS- ESCHERICHIA COLI  210-239 CRIPTIONALACTIVATOR PTDCC_ECOLI TDCC PROTEIN ESCHERICHIA COLI  334-361 PTEE6_STRPYTRYPSIN-RESIST SURFACE STREPTOCOCCUS PYOGENES  137-164  361-395  400-437T6 PROTEIN PREC PTER2_ECOLI TETRACYCLINE REPRESSOR ESCHERICHIA COLI  8-36 PROTEIN CLASS B PTER4_ECOLI TETRACYCLINE REPRESSOR ESCHERICHIACOLI  183-210 PROTEIN CLASS D PTERA_ALCSP TELLURIUM RESISTANCEALCALIGENES SP  48-86 PROTEIN TERA PTESB_ECOLI ACYL-COA THIOESTERASE IIESCHERICHIA COLI   4-31 PTET5_ENTFA TETRACYCLINE RESISTANCE ENTEROCOCCUSFAECALIS   2-36  130-159  179-206  217-244 PROTEIN TETM PTET9_ENTFATETRACYCLINE RESISTANCE ENTEROCOCCUS FAECALIS   2-36  130-159  217-244 260-287 PROTEIN TETM PTETC_ECOLI TRANSPOSON TN10 TETC ESCHERICHIA COLI 72-106  116-158 PROTEIN PTETM_STRLI TETRACYCLINE RESISTANCESTREPTOMYCES LIVIDANS  82-109 PROTEIN PTETM_UREUR TETRACYCLINERESISTANCE UREAPLASMA UREALYTICUM   2-36  130-159  217-244  260-287PROTEIN TETM PTETO_CAMCO TETRACYCLINE RESISTANCE CAMPYLOBACTER COLI  2-29 PROTEIN TETO PTETO_CAMJE TETRACYCLINE RESISTANCE CAMPYLOBACTERJEJUNI   2-36 PROTEIN TETO PTETO_STRMU TETRACYCLINE RESISTANCESTREPTOCOCCUS MUTANS   2-29 PROTEIN TETO PTETX_BACFR TETRACYCLINERESISTANCE BACTEROIDES FRAGILIS  25-62 PROTEIN PTETX_CLOTE TETANUS TOXINPRECURSOR CLOSTRIDIUM TETANI  274-304  540-567  615-642  692-719 985-1012 1240-1277 PTF2B_PYRWO TRANS INITIATION FACTOR PYROCOCCUSWOESEI  218-258 IIB HOMOLOG PTFDC_ALCEU CHLOROCATECHOL 1,2- ALCALIGENESEUTROPHUS   2-33 DIOXYGENASE PTGT_ECOLI QUEUINE TRNA-RIBOSYL-ESCHERICHIA COLI  173-200 TRANSFERASE PTHD1_LACLA THREONINE DEHYDRATASELACTOCOCCUS LACTIS  267-303 BIOSYNTHETIC PTHD2_ECOLI THREONINEDEHYDRATASE ESCHERICHIA COLI  293-320 CATABOLIC PTHDF_BACSU FURANOXIDATION PROTEIN BACILLUS SUBTILIS  153-180  192-226  282-316  391-418THDF PTHDF_ECOLI FURAN OXIDATION PROTEIN ESCHERICHIA COLI  226-260 404-431 THDF PTHDF_PSEPU FURAN OXIDATION PROTEIN PSEUDOMONAS PUTIDA 226-260 THDF PTHER_BACCE THERMOLYSIN BACILLUS CEREUS   4-38  240-267PTHER_BACST THERMOLYSIN PRECURSOR BACILLUS STEAROTHERMOPHILUS  45-72PTHER_BACTH THERMOLYSIN BACILLUS THERMO-  86-113 PROTEOLYTICUSPTHET_THEVU THERMITASE THERMOACTINOMYCES VULGARIS  131-161 PTHIC_ECOLITHIC PROTEIN ESCHERICHIA COLI  232-263  301-328 PTHIG_ECOLI THIG PROTEINESCHERICHIA COLI  138-165 PTHPS_SULAC THERMOPSIN PRECURSOR SULFOLOBUSACIDOCALDARIUS  135-172  199-233 PTHRC_BRELA THREONINE SYNTHASEBREVIBACTERIUM  288-315 LACTOFERMENTUM PTHTR_SACER PUTATIVE THIOSULFATESACCHAROPOLYSPORA ERYTHRAEA  69-96 SULFURTRANSFERASE PTIG_ECOLI TRIGGERFACTOR ESCHERICHIA COLI  144-171 PTMPA_TREPA TREPONEMAL MEMBRANETREPONEMA PALLIDUM  236-266 PROTEIN A PRECURSOR PTMPB_TREPA TREPONEMALMEMBRANE TREPONEMA PALLIDUM  44-71 PROTEIN B PRECURSOR PTMPB_TREPHTREPONEMAL MEMBRANE TREPONEMA PHAGEDENIS  41-68 PROTEIN B PRECURSORPTNAB_ECOLI LOW AFFINITY TRYPTOPHAN ESCHERICHIA COLI  74-108 PERMEASEPTNP4_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  52-79  322-349PTNP7_ENTFA TRANSPOSON TN917 ENTEROCOCCUS FAECALIS  59-97  111-138RESOLVASE PTNPA_STAAU TRANSPOSASE A STAPHYLOCOCCUS AUREUS  151-178PTNPB_STAAU TRANSPOSASE B STAPHYLOCOCCUS AUREUS  589-625 PTNPI_BACTU TNPI RESOLVASE BACILLUS THURINGIENSIS   7-62  65-92  174-201 PTNSB_ECOLITRANSPOSON TN7 TRANS- ESCHERICHIA COLI  99-126  510-537 POSITION PROTEINTNSB PTNSC_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI  32-59  314-341POSITION PROTEIN TNSC PTNSD_ECOLI TRANSPOSON TN7 TRANS- ESCHERICHIA COLI 339-366 POSITION PROTEIN TNSD PTNSE_ECOLI TRANSPOSON TN7 TRANS-ESCHERICHIA COLI  463-490 POSITION PROTEIN TNSE PTOD1_PSEPU TOLUENE1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  36-63 ALPHA SUBUNIT PTOD2_PSEPUTOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  119-153 BETA SUBUNITPTODA_PSEPU TOLUENE 1,2-DIOXYGENASE PSEUDOMONAS PUTIDA  179-213 SYSTEMPTODJ_PSEPU TODF PRODUCT HYDRATASE PSEUDOMONAS PUTIDA  143-170PTOLA_ECOLI TOLA PROTEIN ESCHERICHIA COLI  101-138 PTOLC_ECOLI OUTERMEMBRANE PROTEIN ESCHERICHIA COLI  144-178  184-211  239-266  348-375 383-443 TOLC PRECURSOR PTOP1_SYNP7 DNA TOPOISOMERASE I SYNECHOCOCCUS SP 203-230 PTORA_ECOLI TRIMETHYLAMINE-N-OXIDE ESCHERICHIA COLI  797-824REDUCTASE PTOX1_BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLA PERTUSSIS 179-206 1 (S1) PRECURSOR PTOX2_BORPE PERTUSSIS TOXIN SUBUNIT BORDETELLAPERTUSSIS  58-85 2 (S2) PRECURSOR PTOXA_CLODI TOXIN A CLOSTRIDIUMDIFFICILE  20-88  99-159  204-231  342-369  373-414  847-962  966-994 997-1024 1348-1402 PTOXA_PSEAE EXOTOXIN A PRECURSOR PSEUDOMONASAERUGINOSA  470-497 PTOXB_CLODI TOXIN B CLOSTRIDIUM DIFFICILE  38-72 133-163  199-241  825-869  923-950 1334-1388 1403-1433 1506-15651716-1747 PTOXS_VIBCH TRANSMEMBRANE VIBRIO CHOLERAE  13-40 REGULATORYPROTEIN TOXS PTPF1_TREPA ANTIGEN TPF 1 TREPONEMA PALLIDUM  106-143PTPIS_ECOLI TRIOSEPHOSPHATE ESCHERICHIA COLI  83-110 ISOMERASEPTPIS_MORSP TRIOSEPHOSPHATE MORAXELLA SP  139-166 ISOMERASE PTPR_PORGITHIOL PROTEASE PORPHYROMONAS GINGIVALIS  117-144 PRECURSOR PTR2M_AGRT3TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS  239-266  501-529 OXYGENASEPTR2M_AGRT4 TRYPTOPHAN 2-MONO- AGROBACTERIUM TUMEFACIENS  239-266 501-529 OXYGENASE PTR2M_PSESS TRYPTOPHAN 2-MONO- PSEUDOMONAS SYRINGAE 41-68 OXYGENASE PTRA1_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  58-113PTRA2_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  11-38  58-113 PTRA3_ECOLITRANSPOSASE ESCHERICHIA COLI  721-755 PTRA3_RHIME TRANSPOSASE RHIZOBIUMMELILOTI  179-206 PTRA3_STAAU TRANSPOSASE STAPHYLOCOCCUS AUREUS  33-60 68-95 PTRA4_ECOLI TRANSPOSASE ESCHERICHIA COLI  181-208  308-340 720-754 PTRA6_ECOLI TRANSPOSASE ESCHERICHIA COLI  51-78 PTRA6_SHISOTRANSPOSASE SHIGELLA SONNEI  51-78  200-227  231-258 PTRA7_ECOLITRANSPOSASE ESCHERICHIA COLI  729-756 PTRA9_MYCTU PUTATIVE TRANSPOSASEMYCOBACTERIUM TUBERCULOSIS  159-186 PTRAB_BACTB IS231B PROBABLE BACILLUSTHURINGINESIS  281-308  419-446 TRANSPOSASE PTRAC_BACTB IS231C PROBABLEBACILLUS THIRINGIENSIS  281-308  419-446 TRANSPOSASE PTRAC_STAAUTRANSPOSASE STAPHYLOCOCCUS AUREUS   4-31  45-72 PTRAX_BACTB IS231PROBABLE BACILLUS THURINGIENSIS  281-308  419-446 TRANSPOSASE PTRA_BACTUTRANSPOSASE BACILLUS THURINGIENSIS  93-127  509-539 PTRA_PSEAETRANSPOSASE PSEUDOMONAS AERUGINOSA  127-154  721-755 PTRB1_ECOLI TRABPROTEIN ESCHERICHIA COLI  113-143 PTRBF_ECOLI TRBF PROTEIN ESCHERICHIACOLI  12-39 PTRB1_ECOLI TRB1 PROTEIN ESCHERICHIA COLI  70-97 PTRC1_ECOLITRAC-1 PROTEIN ESCHERICHIA COLI 1006-1058 PTRC2_ECOLI TRAC-2 PROTEINESCHERICHIA COLI 1102-1149 PTRC3_ECOLI TRAC-3 PROTEIN ESCHERICHIA COLI 884-931 PTRD1_ECOLI TRAD PROTEIN ESCHERICHIA COLI  297-348 PTREA_ECOLIPERIPLASMIC TREHALASE ESCHERICHIA COLI  362-403  477-508 PRECURSORPTREC_ECOLI AMYLOTREHALASE ESCHERICHIA COLI  280-307 PTRFA_ECOLI TRFATRANSCRIPTIONAL ESCHERICHIA COLI   5-32  105-132 REPRESSOR PROTEINPTRG1_ECOLI TRAG PROTEIN ESCHERICHIA COLI  61-88  630-657  831-858 865-895 PTRG5_ECOLI TRAG PROTEIN ESCHERICHIA COLI  196-223 PTRG6_ECOLITRAG PROTEIN ESCHERICHIA COLI  195-222  518-545 PTRI1_ECOLI TRAI PROTEINESCHERICHIA COLI  155-209  597-624  887-914 1350-1377 PTRI2_ECOLI TRAIPROTEIN ESCHERICHIA COLI  155-209  597-624  887-914 1350-1377PTRI5_ECOLI TRAI PROTEIN ESCHERICHIA COLI  47-74  328-371 PTRJ4_ECOLITRAJ PROTEIN ESCHERICHIA COLI  36-63 PTRM8_ECOLI TRAM PROTEINESCHERICHIA COLI   5-32 PTRMA_ECOLI TRNA (URACIL-5-)-METHYL- ESCHERICHIACOLI  107-137 TRANSFERASE PTRMD_ECOLI TRNA (GUANINE-N1)- ESCHERICHIACOLI  115-142  226-253 METHYLTRANSFERASE PTRPA_BACSU TRYPTOPHAN SYNTHASEBACILLUS SUBTILIS  220-247 ALPHA CHAIN PTRPA_CAUCR TRYPTOPHAN SYNTHASECAULOBACTER CRESCENTUS  241-275 ALPHA CHAIN PTRPA_PSEAE TRYPTOPHANSYNTHASE PSEUDOMONAS AERUGINOSA  176-203 ALPHA CHAIN PTRPB_ACICATRYPTOPHAN SYNTHASE ACINETOBACTER CALCOACETICUS  79-113 BETA CHAINPTRPB_BACSU TRYPTOPHAN SYNTHASE BACILLUS SUBTILIS  76-103  318-345 BETACHAIN PTRPB_BRELA TRYPTOPHAN SYNTHASE BREVIBACTERIUM  172-199 BETA CHAINLACTOFERMENTUM PTRPB_LACCA TRYPTOPHAN SYNTHASE LACTOBACILLUS CASEI 83-117 BETA CHAIN PTRPB_LACLA TRYPTOPHAN SYNTHASE LACTOBACILLUS LACTIS 77-104  164-191 BETA CHAIN PTRPB_VIBPA TRYPTOPHAN SYNTHASE VIBRIOPARAHAEMOLYTICUS  56-83 BETA CHAIN PTRPC_BRELA INDOLE-3-GLYCEROLBREVIBACTERIUM  229-256 PHOSPHATE SYNTHASE LACTOFERMENTUM PTRPC_ECOLIINDOLE-3-GLYCEROL ESCHERICHIA COLI  205-232 PHOSPHATE SYNTHASEPTRPC_LACLA INDOLE-3-GLYCEROL LACTOCOCCUS LACTIS  148-175 PHOSPHATESYNTHASE PTRPC_VIBPA INDOLE-3-GLYCEROL VIBRIO PARAHAEMOLYTICUS  346-376PHOSPHATE SYNTHASE PTRPD_ACICA ANTHRANILATE PHOSPHOR- ACINETOBACTERCALCOACETICUS  223-250  260-294 IBOSYLTRANSFERASE PTRPD_PSEAEANTHRANILATE PHOSPHOR- PSEUDOMONAS AERUGINOSA  205-232 IBOSYLTRANSFERASEPTRPD_PSEPU ANTHRANILATE PHOSPHOR- PSEUDOMONAS PUTIDA  205-232IBOSYLTRANSFERASE PTRPD_VIBPA ANTHRANILATE PHOSPHOR- VIBRIOPARAHAEMOLYTICUS   2-29 IBOSYLTRANSFERASE PTRPE_BACPU ANTHRANILATESYNTHASE BACILLUS PUMILUS  33-60 COMPONENT I PTRPE_CLOTM ANTHRANILATESYNTHASE CLOSTRIDIUM THERMOCELLUM  165-226 COMPONENT I PTRPE_LACLAANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS  142-191 COMPONENT IPTRPE_LEPBI ANTHRANILATE SYNTHASE LEPTOSPIRA BIFLEXA  145-179 COMPONENTI PTRPE_RHIME ANTHRANILATE SYNTHASE RHIZOBIUM MELILOTI  139-166PTRPE_SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM  191-218COMPONENT I PTRPE_SULSO ANTHRANILATE SYNTHASE SULFOLOBUS SOLFATARICUS 143-183  298-328 COMPONENT I PTRPE_VIBPA ANTHRANILATE SYNTHASE VIBRIOPARAHAEMOLYTICUS   9-36  54-81 COMPONENT I PTRPG_ACICA ANTHRANILATESYNTHASE ACINETOBACTER CALCOACETICUS  12-39 COMPONENT II PTRPG_AZOBRANTHRANILATE SYNTHASE AZOSPIRILLUM BRASILENSE   4-31 COMPONENT IIPTRPG_ECOLI ANTHRANILATE SYNTHASE ESCHERICHIA COLI   5-32 COMPONENT IIPTRPG_LACLA ANTHRANILATE SYNTHASE LACTOCOCCUS LACTIS   4-31 COMPONENT IIPTRPG_PSEAE ANTHRANILATE SYNTHASE PSEUDOMONAS AERUGINOSA  12-39COMPONENT II PTRPG_SALTY ANTHRANILATE SYNTHASE SALMONELLA TYPHIMURIUM  5-32 COMPONENT II PTRPG_SERMA ANTHRANILATE SYNTHASE SERRATIAMARCESCENS   9-43 COMPONENT II PTRPG_SHIDY ANTHRANILATE SYNTHASESHIGELLA DYSENTERIAE   5-32 COMPONENT II PTRPO_PSEAE PUTATIVETRANSCRIPTIONAL PSEUDOMONAS AERUGINOSA  147-174 REGULATOR PTRS2_ECOLITRAS PROTEIN ESCHERICHIA COLI  85-119 PTRT3_ECOLI RESISTANCE PROTEINESCHERICHIA COLI  184-221 PRECURSOR PTRY1_SALTY TRAY PROTEIN SALMONELLATYPHIMURIUM  30-57 PTRYP_STRGR TRYPSIN PRECURSOR STREPTOMYCES GRISEUS 80-107 PTSR_STRAZ RRNA METHYLTRANSFERASE STREPTOMYCES AZUREUS  126-153PTSST_STAAU TOXIC SHOCK SYNDROME STAPHYLOCOCCUS AUREUS  29-63  102-129TOXIN-1 PRECURSOR PTSX_ECOLI CHANNEL-FORMING PROTEIN ESCHERICHIA COLI 225-252 TSX PRECURSOR PTTK_ECOLI HYPOTHETICAL 24.3 KD ESCHERICHIA COLI 81-115 PROTEIN PTUS_ECOLI SITE-BINDING PROTEIN ESCHERICHIA COLI  57-91 107-134 PTYCA_BACBR TRYOCIDINE SYNTHETASE I BACILLUS BREVIS  117-147 534-561 1019-1051 PTYF1_TREPE ANTIGEN TYF1 TREPONEMA PERTENUE  106-143PTYRA_BACSU POSSIBLE PREPHENATE BACILLUS SUBTILIS  244-271  312-342DEHYDROGENASE PTYRA_ECOLI CHORISMATE MUTASE ESCHERICHIA COLI  329-370PTYRR_ECOLI TRANSCRIPTIONAL ESCHERICHIA COLI  483-510 REGULATORY PROTEINTYRR PTYSY_LACCA THYMIDYLATE SYNTHASE LACTOBACILLUS CASEI  139-173PTYSY_LACLA THYMIDYLATE SYNTHASE LACTOCOCCUS LACTIS  75-109 PTYSY_STAAUTHYMIDYLATE SYNTHASE STAPHYLOCOCCUS AUREUS  69-96 PUHPB_ECOLI SENSORPROTEIN UHPB ESCHERICHIA COLI  276-303  316-343 PUHPB_SALTY SENSORPROTEIN UHPB SALMONELLA TYPHIMURIUM  276-303  316-343 PUMUC_SALTY UMUCPROTEIN SALMONELLA TYPHIMURIUM  204-231 PUPP_ECOLI URACILPHOSPHORIBOSYL- ESCHERICHIA COLI  30-57 TRANSFERASE PURAA_ECOLI URACILPERMEASE ESCHERICHIA COLI  350-384 PURE1_HELPY UREASE ALPHA SUBUNITHELICOBACTER PYLORI  15-42 PURE1_PROMI UREASE ALPHA SUBUNIT PROTEUSMIRABILIS  72-99 PURE1_PROVU UREASE ALPHA SUBUNIT PROTEUS VULGARIS 72-99 PURE1_UREUR UREASE ALPHA SUBUNIT UREAPLASMA UREALYTICUM  13-40 483-517 PURE2_HELPY UREASE BETA SUBUNIT HELICOBACTER PYLORI  62-99PURED_HELPY UREASE OPERON URED HELICOBACTER PYLORI  17-44 PROTEINPUREE_PROMI UREASE ACCESSORY PROTEUS MIRABILIS  57-84 PROTEIN UREEPUREF_KLEAE UREASE ACCESSORY KLEBSIELLA AEROGENES  20-47 PROTEIN UREFPRECURSOR PUS45_LACLA SECRETED 45 KD PROTEIN LACTOCOCCUS LACTIS  44-98 150-223  276-303 PRECURSOR PUSHA_ECOLI P-SUGAR HYDROLASE ESCHERICHIACOLI  56-83 PRECURSOR PUSHA_SALTY SILENT PROTEIN USHA (0) SALMONELLATYPHIMURIUM  56-83 PRECURSOR PUVRA_ECOLI EXCINUCLEASE ABC ESCHERICHIACOLI  527-554  871-898 SUBUNIT A PUVRA_MICLU EXCINUCLEASE ABCMICROCOCCUS LUTEUS  579-606  619-646  684-718  922-949 SUBUNIT APUVRA_PARDE EXCINUCLEASE ABC PARACOCCUS DENITRIFICANS  33-60 SUBUNIT APUVRC_BACSU EXCINUCLEASE ABC BACILLUS SUBTILIS  342-372  511-538 SUBUNITC PUVRC_ECOLI EXCINUCLEASE ABC ESCHERICHIA COLI  37-64  332-362 SUBUNITC PUVRD_ECOLI HELICASE II ESCHERICHIA COLI  280-307 PVANA_ENTFCVANCOMYCIN RESISTANCE ENTEROCOCCUS FAECIUM  182-209 PROTEIN VANAPVANC_ENTGA VANCOMYCIN RESISTANCE ENTEROCOCCUS GALLINARUM  177-211PROTEIN VANC PVIB4_AGRT5 VIRB4 PROTEIN PRECURSOR AGROBACTERIUMTUMEFACIENS  138-172 PVIB6_AGRT5 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS 190-227 PVIB6_AGRT6 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS  190-227PVIB6_AGRT9 VIRB6 PROTEIN AGROBACTERIUM TUMEFACIENS  190-227 PVIBX_AGRT5VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  212-239 PVIBX_AGRT6VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  211-238 PVIBX_AGRT9VIRB10 PROTEIN AGROBACTERIUM TUMEFACIENS  32-59  212-239 PVIC1_AGRRAVIRC1 PROTEIN AGROBACTERIUM RHIZOGENES  81-108 TUMEFACIENS PVIC1_AGRT5VIRC1 PROTEIN AGROBACTERIUM TUMEFACIENS  81-108 PVIC1_AGRT6 VIRC1PROTEIN AGROBACTERIUM TUMEFACIENS  81-108 PVID3_AGRRA VIRD3 PROTEINAGROBACTERIUM RHIZOGENES  149-176  265-292 PVIRA_AGRT5 WIDE HOST RANGE(WHR) AGROBACTERIUM TUMEFACIENS  42-76  113-147  657-684 VIRA PROTEINPVIRA_AGRT6 WIDE HOST RANGE (WHR) AGROBACTERIUM TUMEFACIENS  42-69 84-125  653-680 VIRA PROTEIN PVIRA_AGRT9 WIDE HOST RANGE (WHR)AGROBACTERIUM TUMEFACIENS  42-69  84-125  653-680 VIRA PROTEINPVIRB_SHIFL VIRB TRANSCRIPTIONAL SHIGELLA FLEXNERI  37-71  107-134 187-214  252-291 ACTIVATOR PVIRF_YEREN VIRULENCE REGULON YERSINIAENTEROCOLITICA  16-46 TRANSACTIVATOR PVIRG_AGRRA VIRG REGULATORY PROTEINAGROBACTERIUM RHIZOGENES  34-61 PVIRL_AGRT6 LIMITED HOST RANGE (LHR)AGROBACTERIUM TUMEFACIENS  106-157 VIRA PROTEIN PVISC_ECOLI VISC PROTEINESCHERICHIA COLI  47-74 PVLPA_MYCHR VARIANT SURFACE ANTIGEN MYCOPLASMAHYORHINIS  74-112 A PRECURSOR PVM03_BORHE OUTER MEMBRANE LIPO- BORRELIAHERMSII  54-81 PROTEIN 3 PRECURSOR PVM07_BORHE OUTER MEMBRANE LIPO-BORRELIA HERMSII  332-359 PROTEIN 7 PRECURSOR PVM21_BORHE OUTER MEMBRANELIPO- BORRELIA HERMSII  330-357 PROTEIN 21 PRECURSOR PVM24_BORHE OUTERMEMBRANE LIPO- BORRELIA HERMSII  47-143 PROTEIN 24 PRECURSOR PVM25_BORHEOUTER MEMBRANE LIPO- BORRELIA HERMSII  315-356 PROTEIN 25 PRECURSORPVNFA_AZOVI NITROGEN FIXATION AZOTOBACTER VINELANDII  158-188  218-245PROTEIN VNFA PVNFK_AZOCH NITROGENASE VANADIUM- AZOTOBACTER CHROOCOCCUM 68-95 IRON PROTEIN MCD 1 PVNFK_AZOVI NITROGENASE VANADIUM- AZOTOBACTERVINELANDII  68-95  372-403 IRON PROTEIN PVRP2_SALCH 65 KD VIRULENCEPROTEIN SALMONELLA CHOLERAE-SUIS  509-536 PVRP2_SALDU 65 KD VIRULENCEPROTEIN SALMONELLA DUBLIN  511-538 PVSDE_SALDU VIRULENCE PROTEIN VSDESALMONELLA DUBLIN   3-36 PVVHB_VIBVU CYTOLYSIN SECRETION VIBRIOVULNIFICUS  30-75 PROTEIN PWAPA_STRMU WALL-ASSOCIATED PROTEINSTREPTOCOCCUS MUTANS   4-41  313-386 PRECURSOR PWRBA_ECOLI TRP REPRESSORBINDING ESCHERICHIA COLI  89-116 PROTEIN PX191_ECOLI X POLYPEPTIDEESCHERICHIA COLI  104-131 PX192_ECOLI X POLYPEPTIDE ESCHERICHIA COLI 104-131 PX193_ECOLI X POLYPEPTIDE ESCHERICHIA COLI  104-131 PXISA_ANASPEXCISASE A ANABAENA SP   4-31  89-116  135-162 PXPRB_ECOLI POSSIBLEINTEGRASE/ ESCHERICHIA COLI  268-295 RECOMBINASE XPRB PXYLA_STAXY XYLOSEISOMERASE STAPHYLOCOCCUS XYLOSUS  411-438 PXYLK_KLEAE XYLULOSE KINASEKLEBSIELLA AEROGENES   2-29 PXYLK_LACPE XYLULOSE KINASE LACTOBACILLUSPENTOSUS  52-79  211-238  260-287 PXYLK_STAXY XYLULOSE KINASESTAPHYLOCOCCUS XYLOSUS   4-31  96-130  209-236  246-273 PXYLR_BACSUXYLOSE REPRESSOR BACILLUS SUBTILIS  75-102  260-287 PXYLR_LACPE XYLOSEREPRESSOR LACTOBACILLUS PENTOSUS  262-289 PXYLR_STAXY XYLOSE REPRESSORSTAPHYLOCOCCUS XYLOSUS  20-64  101-158  181-215  221-255  274-301PXYLZ_PSEPU ELECTRON TRANSFER PSEUDOMONAS PUTIDA  51-78  104-131COMPONENT PXYN4_CALSA PUTATIVE ENDO-1,4- CALDOCELLUM  198-225BETA-XYLANASE SACCHAROLYTICUM PXYNA_BACCI O-1,4-BETA-XYLANASE BACILLUSCIRCULANS  47-74 PRECURSOR PXYNA_BACSS ENDO-1,4-BETA-XYLANASE BACILLUSSP  173-200 PRECURSOR PXYNA_BACSU ENDO-1,4-BETA-XYLANASE BACILLUSSUBTILIS  47-74 PRECURSOR PXYNA_CALSA ENDO-1,4-BETA-XYLANASE ACALDOCELLUM  132-159  226-256 PRECURSOR SACCHAROLYTICUM PXYNA_PSEFLENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS  33-82 PRECURSORPXYNB_BACPU BETA-XYLOSIDASE BACILLUS PUMILUS  459-486 PXYNB_CALSABETA-XYLOSIDASE CALDOCELLUM  440-474 SACCHAROLYTICUM PXYNB_PSEFLENDO-1,4-BETA-XYLANASE PSEUDOMONAS FLUORESCENS  51-78  251-278  317-344 475-502 PRECURSOR PXYNC_PSEFL ALPHA-L-ARABINOFURAN- PSEUDOMONASFLUORESCENS  51-78  251-278 OSIDASE C PRECURSOR PXYNC_STRLIENDO-1,4-BETA-XYLANASE STREPTOMYCES LIVIDANS  183-210 C PRECURSORPY14K_HALMO HYPOTHETICAL 14.9 KD HALOCOCCUS MORRHUAE  56-83 PROTEINPY23K_STROR HYPOTHETICAL 23.1 KD STREPTOCOCCUS ORALIS  78-105 PROTEINPY36K_METSM HYPOTHETICAL 36.7 KD METHANOBREVIBACTER SMITHII  128-162 172-218 PROTEIN PYAAC_ECOLI HYPOTHETICAL 34.6 KD ESCHERICHIA COLI 271-298 PROTEIN PYAAC_PSEFL HYPOTHETICAL 33.9 KD PSEUDOMONASFLUORESCENS  274-301 PROTEIN PYAAM_ECOLI HYPOTHETICAL 59.1 KDESCHERICHIA COLI  45-72 PROTEIN PYAAP_ECOLI HYPOTHETICAL 56.6 KDESCHERICHIA COLI  352-379 PROTEIN PYAAQ_ECOLI HYPOTHETICAL 28.5 KDESCHERICHIA COLI  155-182 PROTEIN PYABC_ECOLI HYPOTHETICAL 34.9 KDESCHERICHIA COLI  131-158 PROTEIN PYABG_ECOLI HYPOTHETICAL 89.7 KDESCHERICHIA COLI  446-480  627-654 PROTEIN PYABN_ECOLI HYPOTHETICAL 63.9KD ESCHERICHIA COLI  428-455 PROTEIN PYAC3_PSEAE HYPOTHETICAL 23.9 KDPSEUDOMONAS AERUGINOSA  48-75  150-177 PROTEIN PYAD2_CLOAB HYPOTHETICAL21.6 KD CLOSTRIDIUM ACETOBUTYLICUM  75-109  114-144 PROTEIN PYAD3_CLOABHYPOTHETICAL 36.9 KD CLOSTRIDIUM ACETOBUTYLICUM  132-159  165-196 210-237 PROTEIN PYAD6_CLOAB HYPOTHETICAL PROTEIN CLOSTRIDIUMACETOBUTYLICUM  21-55 PYADA_YEREN INVASIN PRECURSOR YERSINIAENTEROCOLITICA  196-230  247-274  318-381 PYADA_YERPS INVASIN PRECURSORYERSINIA PSEUDOTUBERCULOSIS  255-282  297-360 PYADC_ECOLI HYPOTHETICALPROTEIN ESCHERICHIA COLI  13-40  101-131 PYAEA_RICRI 17 KD PROTEINRICKETTSIA RICKETTSII  107-134 PYAFB_ECOLI HYPOTHETICAL 29.4 KDESCHERICHIA COLI  221-248 PROTEIN PYAFD_ECOLI HYPOTHETICAL 29.1 KDESCHERICHIA COLI  34-71 PROTEIN PYAFE_ECOLI HYPOTHETICAL 23.0 KDESCHERICHIA COLI  123-150 PROTEIN PYA1B_ESCFE HYPOTHETICAL PROTEINESCHERICHIA FERGUSONII   2-35 PYAM1_SALTY PUTATIVE AMIDASE SALMONELLATYPHIMURIUM  73-100 PYAT1_SYNY3 HYPOTHETICAL 13.0 KD SYNECHOCYSTIS SP 26-60 PROTEIN PYATP_MYCLE HYPO PROTEIN PUTATIVE MYCOBACTERIUM LEPRAE 23-57  91-158  511-538 ATP OPERON PYATR_BACFI HYPOL ATP-BINDINGBACILLUS FIRMUS  211-238 TRANSPORT PROTEIN PYATS_MYCGA HYPOTHETICALPROTEIN MYCOPLASMA GALLISEPTICUM   7-41 PYATU_MYCGA HYPOTHETICAL PROTEINMYCOPLASMA GALLISEPTICUM  29-56  60-87 PYAV5_XANCV HYPOTHETICAL 50 KDXANTHOMONAS CAMPESTRIS  68-98  199-226 AVIRULENCE PROTEIN PYBAH_ECOLIHYPOTHETICAL 24.8 KD ESCHERICHIA COLI  49-79 PROTEIN PYBBA_ECOLIHYPOTHETICAL ABC ESCHERICHIA COLI   6-69 TRANSPORTER PYBED_ECOLIHYPOTHETICAL 9.8 KD ESCHERICHIA COLI  51-82 PROTEIN PYBID_ECOLIHYPOTHETICAL 14.1 KD ESCHERICHIA COLI  97-124 PROTEIN PYCAE_ECOLIHYPOTHETICAL 24.5 KD ESCHERICHIA COLI  34-61 PROTEIN PYCBA_ECOLIHYPOTHETICAL PROTEIN ESCHERICHIA COLI  38-65 PYCBL_BACUN HYPOTHETICAL17.3 KD BACTEROIDES UNIFORMIS  66-100 PROTEIN PYCEA_BACLA HYPOTHETICALPROTEIN BACILLUS LAUTUS  111-138 PYCFC_ECOLI HYPOTHETICAL 22.9 KDESCHERICHIA COLI  52-79 PROTEIN PYCHR_ALCEU HYPOTHETICAL PROTEINALCALIGENES EUTROPHUS  21-48 PYCIB_ECOLI HYPOTHETICAL 20.8 KDESCHERICHIA COLI  16-43 PROTEIN PYCIF_ECOLI 18.6 KD PROTEIN ESCHERICHIACOLI   7-68  134-166 PYCIK_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 35-62 PYCL1_ECOLI HYPOTHETICAL 43.3 KD ESCHERICHIA COLI  54-81 PROTEINPYCP3_SYNPY HYPOTHETICAL 29.3 KD SYNECHOCOCCUS SP  194-221 PROTEINPYCP3_SYNY3 HYPOTHETICAL 28.0 KD SYNECHOCYSTIS SP   7-34  120-154PROTEIN PYCP5_SYNY3 HYPOTETHICAL 39.5 KD SYNECHOCYSTIS SP  277-308PROTEIN PYCPG_MASLA HYPOTHETICAL PROTEIN MASTIGOCLADUS LAMINOSUS   2-29PYCPY_PSEA9 HYPO PHYCOCYANIN PSEUDANABAENA SP  380-407 OPERON PROTEIN YPYCR2_BACTK HYPOTHETICAL 29.1 KD BACILLUS THURINGIENSIS  42-84  153-180PROTEIN PYCS5_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  32-59PRECURSOR PYCW5_BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS   3-30 59-86 PYD3M_HERAU HYPOTHETICAL 68.4 KD HERPETOSIPHON AURANTIACUS  12-39 151-178  360-416 PROTEIN PYDBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIACOLI  32-66  117-144  163-216  233-267  295-329  458-485  676-7171136-1163 1499-1530 PYDBD_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 80-107 PYDDB_ECOLI HYPOTHETICAL 86.7 KD ESCHERICHIA COLI  606-641 683-714  726-753 PROTEIN PYDDC_ECOLI HYPOTHETICAL 80.8 KD ESCHERICHIACOLI  373-400  421-452  621-648 PROTEIN PYDDD_ECOLI HYPOTHETICAL 24.1 KDESCHERICHIA COLI  133-174 PROTEIN PYDEH_ECOLI HYPOTHETICAL 20.5 KDESCHERICHIA COLI  96-130 PROTEIN PYDEJ_ECOLI HYPOTHETICAL 18.3 KDESCHERICHIA COLI   4-38 PROTEIN PYDEK_ECOLI HYPOTHETICAL 65.5 KDESCHERICHIA COLI  333-360  524-551  565-592 PROTEIN PYDNN_BORBUHYPOTHETICAL 11.2 KD BORRELIA BURGDORFERI   6-36 PROTEIN PYDO1_SULSOHYPOTHETICAL 14.7 KD SULFOLOBUS SOLFATARICUS  17-58  71-103 PROTEINPYDO3_SULSO HYPOTHETICAL 16.9 KD SULFOLOBUS SOLFATARICUS  11-38 PROTEINPYEBA_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  93-120 PYEBG_ECOLIHYPOTHETICAL 10.7 KD ESCHERICHIA COLI  50-77 PROTEIN PYEEE_ECOLIHYPOTHETICAL 38.1 KD ESCHERICHIA COLI  43-70 PROTEIN PYEEF_ECOLI HYPO49.8 KD TRANSPORT ESCHERICHIA COLI  147-174 PROTEIN PYEGA_ECOLIHYPOTHETICAL IN DCD ESCHERICHIA COLI  145-172 3′ REGION PYEHA_ECOLIHYPOTHETICAL 36.9 KD ESCHERICHIA COLI  69-106  283-310 PROTEINPYEHB_ECOLI HYPOTHETICAL 92.3 KD ESCHERICHIA COLI  151-178  501-545PROTEIN PYEHD_ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI  96-123PROTEIN PYEHF_ECOLI HYPOTHETICAL 141.0 KD ESCHERICHIA COLI  543-570PROTEIN PYEHI_ECOLI HYPOTHETICAL 138.1 KD ESCHERICHIA COLI  35-70 102-129 PROTEIN PYEHU_ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI 326-353 PROTEIN PYEIC_ECOLI HYPOTHETICAL 33.6 KD ESCHERICHIA COLI 46-80 PROTEIN PYEIF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  61-88PYEIJ_ECOLI HYPOTHETICAL 43.4 KD ESCHERICHIA COLI  15-42 PROTEINPYEJA_ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI  83-110 TRANSPORTERPYEJF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  453-480 PYEJO_ECOLIHYPOTHETICAL 91.2 KD ESCHERICHIA COLI  399-433 PROTEIN PYFHD_ECOLIHYPOTHETICAL 40.6 KD ESCHERICHIA COLI  175-202 PROTEIN PYFU2_BACSTHYPOTHETICAL 30.6 KD BACILLUS STEAROTHERMOPHILUS  133-160 PROTEINPYFXK_BRAJA HYPOTHETICAL PROTEIN BRADYRHIZOBIUM JAPONICUM  109-150PYGAP_BACME HYPOTHETICAL 37.7 KD BACILLUS MEGATERIUM  40-67 PROTEINPYGFD_ECOLI HYPOTHETICAL 29.4 KD ESCHERICHIA COLI  214-241 PROTEINPYGGB_ECOLI HYPOTHETICAL 30.9 KD ESCHERICHIA COLI  225-252 PROTEINPYGGG_ECOLI HYPOTHETICAL 31.8 KD ESCHERICHIA COLI  209-236 PROTEINPYG12_BACTU HYPOTHETICAL 22.8 KD BACILLUS THURINGIENSIS  26-61 PROTEINPYG12_PSEPU HYPOTHETICAL 32.4 KD PSEUDOMONAS PUTIDA  145-172 PROTEINPYGiF_ECOLI HYPOTHETICAL 48.4 KD ESCHERICHIA COLI  223-264 PROTEINPYGL4_BACST HYPOTHETICAL 35.5 KD BACILLUS STEAROTHERMOPHILUS   6-33PROTEIN PYGL5_BACST HYPOTHETICAL PROTEIN BACILLUS STEAROTHERMOPHILUS 182-209 PYGLN_BACCE HYPOTHETICAL 15 KD BACILLUS CEREUS  79-124 PROTEINPYGRD_BACSU HYPOTHETICAL PROTEIN BACILLUS SUBTILIS  20-47 PYGRE_BACSUHYPOTHETICAL 17.1 KD BACILLUS SUBTILIS  84-111 PROTEIN PYGRP_BACSUHYPOTHETICAL 39.0 KD BACILLUS SUBTILIS  98-125 PROTEIN PYGRP_CLOABHYPOTHETICAL 38.8 KD CLOSTRIDIUM ACETOBUTYLICUM  160-210 PROTEINPYGT2_STRMU HYPOTHETICAL PROTEIN 2 STREPTOCOCCUS MUTANS   4-40  110-138 235-262 PYHAB_ECOLI HYPOTHETICAL 20.6 KD ESCHERICHIA COLI  20-66PROTEIN PYHAC_ECOLI HYPOTHETICAL 45.2 KD ESCHERICHIA COLI  69-96 PROTEINPYHAF_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI  44-71  138-165PYHBG_ECOLI PROBABLE ABC ESCHERICHIA COLI  176-203 TRANSPORTERPYHBG_PSEPU PROBABLE ABC PSEUDOMONAS PUTIDA  74-101  106-133  147-174TRANSPORTER PYHBG_THIFE PROBABLE ABC THIOBACILLUS FERROOXIDANS  113-140TRANSPORTER PYHDF_ECOLI HYPOTHETICAL 55.4 KD ESCHERICHIA COLI  267-297PROTEIN PYHEM_BACSU HYPOTHETICAL 32.0 KD BACILLUS SUBTILIS  222-253PROTEIN PYHET_ANASP HYPOTHETICAL PROTEIN ANABAENA SP  72-99 PYHHA_ECOLIHYPOTHETICAL 16.6 KD ESCHERICHIA COLI  56-84 PROTEIN PYHHG_ECOLIHYPOTHETICAL 15.1 KD ESCHERICHIA COLI  43-77 PROTEIN PYHHH_ECOLIHYPOTHETICAL 14.5 KD ESCHERICHIA COLI  43-73 PROTEIN PYHI1_LACLAHYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS  167-194 PYHI3_LACLAHYPOTHETICAL 38.0 KD LACTOCOCCUS LACTIS  90-124  132-159 PROTEINPYHI6_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS  92-148 PROTEINPYHI8_LACLA HYPOTHETICAL 30.7 KD LACTOCOCCUS LACTIS  77-104  156-183PROTEIN PYHLB_STAAU HYPOTHETICAL PROTEIN STAPHYLOCOCCUS AUREUS  18-67PYHLB_VIBCH HYPOTHETICAL 18.3 KD VIBRIO CHOLERAE  99-126 PROTEINPYHMF_METFE HYPOTHETICAL 32.2 KD METHANOTHERMUS FERVIDUS  106-133PROTEIN PYHS1_CLOAB HYPOTHETICAL 11.0 KD CLOSTRIDIUM ACETOBUTYLICUM 41-85 PROTEIN PYHSA_CLOAB HYPOTHETICAL 20.6 KD CLOSTRIDIUMACETOBUTYLICUM  98-125 PROTEIN PYHSC_CLOAB HYPOTHETICAL 42.4 KDCLOSTRIDIUM ACETOBUTYLICUM  25-52  208-253  276-310 PROTEIN PYHV1_LACHEHYPOTHETICAL PROTEIN LACTOBACILLUS HELVETICUS  93-120  127-154PYHYA_PSESN HYPOTHETICAL PROTEIN PSEUDOMONAS SP  217-266 PYI11_HALHAHYPOTHETICAL 38.0 KD HALOBACTERIUM HALOBIUM  245-272 PROTEIN PYI32_MYCTUIS986 HYPOTHETICAL 6.6 KD MYCOBACTERIUM TUBERCULOSIS  19-46 PROTEINPYI42_PSEAY HYPOTHETICAL 42.6 KD PSEUDOMONAS AMYLODERAMOSA   9-36PROTEIN PYI48_METSM ISM1 HYPOTHETICAL 48.3 KD METHANOBREVIBACTER SMITHII 73-100  154-184  338-365 PROTEIN PYI52_HALHA HYPOTHETICAL 31 KDHALOBACTERIUM HALOBIUM  86-113 PROTEIN PYIBB_ECOLI HYPOTHETICAL 34.0 KDESCHERICHIA COLI  202-239 PROTEIN PYIBD_ECOLI HYPOTHETICAL PROTEINESCHERICHIA COLI   9-43 PYIBF_ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIACOLI  131-158 PROTEIN PYIBG_ECOLI HYPOTHETICAL 18.1 KD ESCHERICHIA COLI 70-97 PROTEIN PYICC_ECOLI HYPOTHETICAL 33.2 KD ESCHERICHIA COLI 143-170 PROTEIN PYICD_ECOLI HYPOTHETICAL 31.1 KD ESCHERICHIA COLI 132-159 PROTEIN PYICH_ECOLI HYPOTHETICAL 62.3 KD ESCHERICHIA COLI 408-435 PROTEIN PYICI_ECOLI HYPOTHETICAL 88.1 KD ESCHERICHIA COLI 122-149 PROTEIN PYICN_ECOLI HYPOTHETICAL 18.2 KD ESCHERICHIA COLI 76-103 PROTEIN PYICO_ECOLI HYPOTHETICAL 49.9 KD ESCHERICHIA COLI 320-347 PROTEIN PYIDB_ECOLI HYPOTHETICAL 13.8 KD ESCHERICHIA COLI 34-78 PROTEIN PYIDE_ECOLI HYPOTHETICAL 58.9 KD ESCHERICHIA COLI  86-113 182-209  277-304 PROTEIN PYIDI_ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIACOLI  56-83 PROTEIN PYIDK_ECOLI HYPOTHETICAL 62.1 KD ESCHERICHIA COLI  2-39 PROTEIN PYIDP_ECOLI HYPOTHETICAL 27.3 KD ESCHERICHIA COLI  63-97PROTEIN PYIEA_ECOLI HYPOTHETICAL 49.2 KD ESCHERICHIA COLI  221-248PROTEIN PYIEC_ECOLI HYPOTHETICAL 60.6 KD ESCHERICHIA COLI  20-58 270-297 PROTEIN PYIEC_ERWCH HYPOTHETICAL PROTEIN ERWINIA CHRYSANTHEMI 22-67 PYIED_ECOLI HYPOTHETICAL 34.8 KD ESCHERICHIA COLI  86-120 PROTEINPYIEG_ECOLI HYPOTHETICAL 46.9 KD ESCHERICHIA COLI  293-327 PROTEINPYIEH_ECOLI HYPOTHETICAL 24.7 KD ESCHERICHIA COLI  51-78 PROTEINPYIEM_ECOLI HYPOTHETICAL 15.0 KD ESCHERICHIA COLI  73-105 PROTEINPYIEO_ECOLI HYPOTHETICAL 51.5 KD ESCHERICHIA COLI  201-242  380-407PROTEIN PYIFC_ECOLI HYPOTHETICAL 39.6 KD ESCHERICHIA COLI  175-202PROTEIN PYIGJ_ECOLI HYPOTHETICAL 14.0 KD ESCHERICHIA COLI  51-92 PROTEINPYIGM_ECOLI HYPOTHETICAL 33.7 KD ESCHERICHIA COLI  120-154 PROTEINPYIGN_ECOLI HYPOTHETICAL 54.7 KD ESCHERICHIA COLI  207-234 PROTEINPYIGO_ECOLI HYPOTHETICAL 28.1 KD ESCHERICHIA COLI  67-94 PROTEINPYIGP_ECOLI HYPOTHETICAL 22.3 KD ESCHERICHIA COLI  173-200 PROTEINPYIGT_ECOLI HYPOTHETICAL 27.8 KD ESCHERICHIA COLI  132-159 PROTEINPYIHB_ECOLI HYPOTHETICAL 21.2 KD ESCHERICHIA COLI  13-40 PROTEINPYIHD_ECOLI HYPOTHETICAL 10.3 KD ESCHERICHIA COLI  28-55 PROTEINPYIHF_ECOLI HYPOTHETICAL 54.1 KD ESCHERICHIA COLI  272-306 PROTEINPYIHI_ECOLI HYPOTHETICAL 19.1 KD ESCHERICHIA COLI  112-139 PROTEINPYIHK_ECOLI HYPOTHETICAL 65.4 KD ESCHERICHIA COLI   4-31 PROTEINPYIHM_ECOLI HYPOTHETICAL 36.9 KD ESCHERICHIA COLI  83-110  120-154 297-324 PROTEIN PYIHO_ECOLI HYPOTHETICAL 81.8 KD ESCHERICHIA COLI 612-646 PROTEIN PYIHP_ECOLI HYPOTHETICAL 53.1 KD ESCHERICHIA COLI 357-384 PROTEIN PYIHV_ECOLI HYPOTHETICAL 31.9 KD ESCHERICHIA COLI 72-99 PROTEIN PYIHX_ECOLI HYPOTHETICAL 23.5 KD ESCHERICHIA COLI   9-36PROTEIN PYIHZ_ECOLI HYPOTHETICAL 15.9 KD ESCHERICHIA COLI   6-33 PROTEINPYIIP_ECOLI HYPOTHETICAL 32.9 KD ESCHERICHIA COLI  22-63 PROTEINPYIIU_ECOLI HYPOTHETICAL 9.6 KD ESCHERICHIA COLI  28-71 PROTEINPYIJC_ECOLI HYPOTHETICAL 26.6 KD ESCHERICHIA COLI  136-163 PROTEINPYIJH_ECOLI HYPOTHETICAL 78.3 KD ESCHERICHIA COLI  225-263 PROTEINPYIJK_ECOLI HYPOTHETICAL 11.2 KD ESCHERICHIA COLI  26-53 PROTEINPYIJO_ECOLI HYPOTHETICAL 32.1 KD ESCHERICHIA COLI  214-241 PROTEINPYIJP_ECOLI HYPOTHETICAL 66.6 KD ESCHERICHIA COLI  110-137  419-446PROTEIN PYINL_LISMO HYPOTHETICAL 26.8 KD LISTERIA MONOCYTOGENES   7-34PROTEIN PYIS1_SHISO INSERTION ELEMENT IS600 SHIGELLA SONNEI  62-89PYIS1_STRCO IS110 HYPOTHETICAL 43.6 KD STREPTOMYCES COELICOLOR  125-152PROTEIN PYIS3_SHISO INSERTION LEMENT IS629 SHIGELLA SONNEI  66-100PYISP_BACSP HYPOTHETICAL 41.2 KD BACILLUS SP  312-339 PROTEINPYJAG_ECOLI HYPOTHETICAL 22.6 KD ESCHERICHIA COLI  51-78 PROTEINPYJAI_ECOLI HYPOTHETICAL 20.4 KD ESCHERICHIA COLI  88-122 PROTEINPYJBH_ECOLI HYPOTHETICAL 78.5 KD ESCHERICHIA COLI  93-120 PROTEINPYJBL_ECOLI HYPOTHETICAL 9.7 KD ESCHERICHIA COLI  30-57 PROTEINPYJBM_ECOLI HYPOTHETICAL 26.7 KD ESCHERICHIA COLI  112-149 PROTEINPYJBQ_ECOLI HYPOTHETICAL 15.7 KD ESCHERICHIA COLI   2-29 PROTEINPYJCC_ECOLI HYPOTHETICAL 60.8 KD ESCHERICHIA COLI  38-65  414-441 451-492 PROTEIN PYJCE_ECOLI HYPOTHETICAL 60.5 KD ESCHERICHIA COLI 454-481 PROTEIN PYJCG_ECOLI HYPOTHETICAL 59.2 KD ESCHERICHIA COLI 394-421 PROTEIN PYJCO_ECOLI HYPOTHETICAL 25.1 KD ESCHERICHIA COLI 91-118 PROTEIN PYJCP_ECOLI HYPOTHETICAL 53.4 KD ESCHERICHIA COLI 242-269 PROTEIN PYJCS_ECOLI HYPOTHETICAL 73.7 KD ESCHERICHIA COLI 366-396 PROTEIN PYJCW_ECOLI HYPOTHETICAL ABC ESCHERICHIA COLI  50-84TRANSPORTER PYJDA_ECOLI HYPOTHETICAL 84.2 KD ESCHERICHIA COLI   2-29 451-485 PROTEIN PYJDB_ECOLI HYPOTHETICAL PROTEIN ESCHERICHIA COLI 103-134 PRECURSOR PYJJA_ECOLI HYPOTHETICAL 17.5 KD ESCHERICHIA COLI 35-69  88-129 PROTEIN PYKAB_BACFI HYPOTHETICAL 48.8 KD BACILLUS FIRMUS 321-355 PROTEIN PYLA1_LACAC HYPOTHETICAL PROTEIN LACTOBACILLUSACIDOPHILUS  47-74 PYLA2_LACAC HYPOTHETICAL 14.5 KD LACTOBACILLUSACIDOPHILUS  15-42 PROTEIN PYLA3_LACAC HYPOTHETICAL 14.4 KDLACTOBACILLUS ACIDOPHILUS  47-74 PROTEIN PYLAC_SULSO HYPOTHETICAL 24.4KD SULFOLOBUS SOLFATARICUS  23-50 PROTEIN PYLP3_PSEPU HYPOTHETICAL 44.7KD PSEUDOMONAS PUTIDA  186-213  314-341 PROTEIN PYLPA_YEREN YLPALIPOPROTEIN YERSINIA ENTEROCOLITICA  184-221 PRECURSOR PYLT3_ANAVAHYPOTHETICAL 22.6 KD ANABAENA VARIABILIS  172-199 PROTEIN PYLUD_LACLAHYPOTHETICAL 29.7 KD LACTOCOCCUS LACTIS  35-70 PROTEIN PYME2_BACSUHYOPTHETICAL 35.3 KD BACILLUS SUBTILIS  52-79 PROTEIN PYMG2_MYCGEHYPOTHETICAL 114.4 KD MYCOPLASMA GENITALIUM  56-83  159-193  420-445 981-1008 PROTEIN PRECURSOR PYNGA_CLOPE HYPOTHETICAL PROTEIN CLOSTRIDIUMPERFRINGENS  139-166 PYNGB_CLOPE HYPOTHETICAL 31.2 KD CLOSTRIDIUMPERFRINGENS  12-49  63-97  182-211 PROTEIN PYNI1_METTL HYPOTHETICALPROTEIN METHANOCOCCUS  55-89 THERMOLITHOTROPHICUS PYNQ1_PARDEHYPOTHETICAL 9.3 KD PARACOCCUS DENITRIFICANS  52-86 PROTEIN PYNT3_ANASPHYPOTHETICAL 28.1 KD ANABAENA SP  171-198 PROTEIN PYNT5_ANASPHYPOTHETICAL PROTEIN ANABAENA SP  87-165 PYOHD_ECOLI HYPOTHETICAL 21.4KD ESCHERICHIA COLI   5-32 PROTEIN PYOHG_ECOLI HYPOTHETICAL 43.3 KDESCHERICHIA COLI  104-171  289-316 PROTEIN PYOJA_ECOLI HYPOTHETICAL 15.0KD ESCHERICHIA COLI  17-44 PROTEIN PYOJE_ECOLI HYPOTHETICAL 93.5 KDESCHERICHIA COLI  221-248 PROTEIN PYOJF_ECOLI HYPOTHETICAL 9.5 KDESCHERICHIA COLI  41-82 PROTEIN PYOJH_ECOLI HYPOTHETICAL 54.3 KDESCHERICHIA COLI  145-193 PROTEIN PYOJJ_ECOLI HYPOTHETICAL 36.2 KDESCHERICHIA COLI  94-121 PROTEIN PYOMA2_PHOS9 HYPOTHETICAL PROTEIN INPHOTOBACTERIUM SP  32-59 OMPH 3′ REGION PYOPH_YEREN PROTEIN-TYROSINEYERSINIA ENTEROCOLITICA  63-105 PHOSPHATASE YOPH PYOPH_YERPSPROTEIN-TYROSINE YERSINIA PSEUDOTUBERCULOSIS  63-105 PHOSPHATASE YOPHPYOPN_YEREN OUTER MEMBRANE PROTEIN YERSINIA ENTEROCOLITICA  23-50  66-93 235-262 YOPN PYOPN_YERPS OUTER MEMBRANE PROTEIN YERSINIAPSEUDOTUBERCULOSIS  23-50  66-93  235-262 YOPN PYOPQ_YEREN YOPQ PROTEINPRECURSOR YERSINIA ENTEROCOLITICA  61-88 PYORA_HAEIN HYPOTHETICAL 31.5KD HAEMOPHILUS INFLUENZAE  147-174 PROTEIN PYORA_LISMO HYPOTHETICAL 25.6KD LISTERIA MONOCYTOGENES  32-77 PROTEIN PYORA_PYRWO HYPOTHETICAL 24.7KD PYROCOCCUS WOESEI  183-210 PROTEIN PYORB_HAEIN HYPOTHETICAL 19.8 KDHAEMOPHILUS INFLUENZAE  39-66 PROTEIN PYORC_HAEIN HYPOTHETICAL 19.9 KDHAEMOPHILUS INFLUENZAE  49-79 PROTEIN PYORE_HAEIN 8 KD PROTEINHAEMOPHILUS INFLUENZAE  47-74  82-109 PYORF_HAEIN 26.8 KD PROTEINHAEMOPHILUS INFLUENZAE  199-229 PYORH_HAEIN HYPOTHETICAL 13.7 KDHAEMOPHILUS INFLUENZAE   7-34 PROTEIN PYORI_HAEIN 95.4 KD PROTEINHAEMOPHILUS INFLUENZAE  416-450  688-722 PYORQ_BACSU HYPOTHETICAL 34 KDBACILLUS SUBTILIS  148-175 PROTEIN PYORX_PYRWO HYPOTHETICAL PROTEINPYROCOCCUS WOESEI  66-93 PYORZ_LISMO HYPOTHETICAL 16.9 KD LISTERIAMONOCYTOGENES  27-54 PROTEIN PYP15_STAAU HYPOTHETICAL 15.5 KDSTAPHYLOCOCCUS AUREUS  71-98  110-137 PROTEIN PYP23_BACSU HYPOTHETICAL22.5 KD BACILLUS SUBTILIS  57-84 PROTEIN PYP23_STAAU HYPOTHETICAL 22.2KD STAPHYLOCOCCUS AUREUS  29-70 PROTEIN PYP2A_STAAU HYPOTHETICAL 26.9 KDSTAPHYLOCOCCUS AUREUS  34-104 PROTEIN PYP2B_STAAU HYPOTHETICAL 27.0 KDSTAPHYLOCOCCUS AUREUS  23-60  62-89  179-206 PROTEIN PYP2C_STAAUHYPOTHETICAL 27.7 KD STAPHYLOCOCCUS AUREUS  13-83  129-176 PROTEINPYP7_AGRT4 HYPOTHETICAL PROTEIN 7 AGROBACTERIUM TUMEFACIENS  29-56PYPA2_LEGPN HYPOTHETICAL PROTEIN LEGIONELLA PNEUMOPHILA  94-135PYPAS_ENTFA HYPOTHETICAL 13 KD ENTEROCOCCUS FAECALIS  79-106 PROTEINPYPA_BACAN HYPOTHETICAL 21.6 KD BACILLUS ANTHRACIS  13-47  115-162PROTEIN PYPC1_ECOLI HYPOTHETICAL 27.6 KD ESCHERICHIA COLI   5-32 PROTEINPYPDA_BACSU HYPOTHETICAL 27.3 KD BACILLUS SUBTILIS  184-222 PROTEINPYPFT_ECOLI HYPOTHETICAL 12.6 KD ESCHERICHIA COLI  16-43 PROTEINPYPH1_SYNP2 HYPOTHETICAL 18.1 KD SYNECHOCOCCUS SP  34-61 PROTEINPYP16_CLOPE HYPOTHETICAL 19.7 KD CLOSTRIDIUM PERFRINGENS   7-34  43-77 83-149 PROTEIN PYP19_CLOPE HYPOTHETICAL 14.5 KD CLOSTRIDIUM PERFRINGENS  2-59 PROTEIN PYPIX_CLOPE HYPOTHETICAL 38.4 KD CLOSTRIDIUM PERFRINGENS 110-137  263-290  303-340 PROTEIN PYPIY_PSEAE HYPOTHETICAL 38.5 KDPSEUDOMONAS AERUGINOSA  22-52 PROTEIN PYPP_BACSU HYPOTHETICAL PROCESSINGBACILLUS SUBTILIS  329-356 PROTEASE PYPQQ_KLEPN HYPOTHETICAL PROTEINKLEBSIELLA PNEUMONIAE  243-270 PYPS2_PLEBO HYPOTHETICAL 13.1 KDPLECTONEMA BORYANUM  27-54 PROTEIN PYPV1_METTF HYPOTHETICAL 40.7 KDMETHANOBACTERIUM  58-85  308-335 PROTEIN THERMOFORMICICUM PYPV3_METTFHYPOTHETICAL 22.5 KD METHANOBACTERIUM   3-30 PROTEIN THERMOFORMICICUMPYPV7_METTF HYPOTHETICAL 17.3 KD METHANOBACTERIUM  69-117 PROTEINTHERMOFORMICICUM PYPVB_METTF HYPOTHETICAL 49.6 KD METHANOBACTERIUM 333-360  389-430 PROTEIN THERMOFORMICICUM PYPYB_BACSU HYPOTHETICAL 72.4KD BACILLUS SUBTILIS  602-636 PROTEIN PYPZ1_METTF HYPOTHETICAL 40.6 KDMETHANOBACTERIUM  58-85  308-335 PROTEIN THERMOFORMICICUM PYPZ2_METTFHYPOTHETICAL 33.1 KD METHANOBACTERIUM  38-65  154-188 PROTEINTHERMOFORMICICUM PYPZ5_METTF HYPOTHETICAL 54.1 KD METHANOBACTERIUM 193-220  226-253  381-408 PROTEIN THERMOFORMICICUM PYPZ7_METTFHYPOTHETICAL 9.7 KD METHANOBACTERIUM   5-78 PROTEIN THERMOFORMICICUMPYR18_THEPE HYPOTHETICAL 18.7 KD THERMOFILUM PENDENS  82-109 PROTEINPYRB1_HALCU HYPOTHETICAL 40 KD HALOBACTERIUM CUTIRUBRUM  20-51GTP-BINDING PROTEIN PYREC_SYNP2 HYPOTHETICAL 28.7 KD SYNECHOCOCCUS SP 49-76 PROTEIN PYRF0_SALTY HYPOTHETICAL 40.6 KD SALMONELLA TYPHIMURIUM 143-190 PROTEIN PYRF2_SALTY HYPOTHETICAL 51.0 KD SALMONELLA TYPHIMURIUM 428-455 PROTEIN PYRF5_SALTY HYPOTHETICAL 20.6 KD SALMONELLA TYPHIMURIUM 29-56 PROTEIN PYRF6_SALTY HYPOTHETICAL 36.6 KD SALMONELLA TYPHIMURIUM 130-157 PROTEIN PYRG2_LACLA HYPOTHETICAL PROTEIN LACTOCOCCUS LACTIS 140-167 PYRL1_METVA HYPOTHETICAL PROTEIN METHANOCOCCUS VANNIELII  40-93 129-156 PYRP2_METVA HYPOTHETICAL 11.6 KD METHANOCOCCUS VANNIELII  13-40PROTEIN PYRP2_SULAC HYPOTHETICAL 11.5 KD SULFOLOBUS ACIDOCALDARIUS  5-51 PROTEIN PYRP3_SULAC HYPOTHETICAL 14.5 KD SULFOLOBUSACIDOCALDARIUS  37-71 PROTEIN PYRTP_BACSU HYPOTHETICAL 25.3 KD BACILLUSSUBTILIS  29-56 PROTEIN PYRTS_BACSU HYPOTHETICAL 11.4 KD BACILLUSSUBTILIS   3-30  44-81 PROTEIN PYSCB_YEREN HYPOTHETICAL YSC OPERONYERSINIA ENTEROCOLITICA  90-121 PROTEIN B PYSCC_YEREN YSC OPERON PROTEINC YERSINIA ENTEROCOLITICA  38-72  365-399 PRECURSOR PYSCD_YEREN YSCOPERON PROTEIN D YERSINIA ENTEROCOLITICA  242-269 PYSCH_YEREN YSC OPERONPROTEIN H YERSINIA ENTEROCOLITICA  28-58 PYSCH_YERPS YSC OPERON PROTEINH YERSINIA PSEUDOTUBERCULOSIS  28-58 PYSCI_YEREN YSC OPERON PROTEIN IYERSINIA ENTEROCOLITICA  49-76 PYSCI_YERPS YSC OPERON PROTEIN I YERSINIAPSEUDOTUBERCULOSIS  49-76 PYSCJ_YERPS YSC OPERON LIPOPROTEIN J YERSINIAENTEROCOLITICA  99-126 PRECURSOR PYSCJ_YEREN YSC OPERON LIPOPROTEIN JYERSINIA PSEUDOTUBERCULOSIS  99-126 PRECURSOR PYSCL_YEREN YSC OPERONPROTEIN L YERSINIA ENTEROCOLITICA  41-68 PYSCL_YERPS YSC OPERON PROTEINL YERSINIA PSEUDOTUBERCULOSIS  41-68 PYSMA_SERMA HYPOTHETICAL 9.5 KDSERRATIA MARCESCENS  11-70 PROTEIN PYSO2_DESAM HYPOTHETICAL 28.3 KDDESULFUROLOBUS AMBIVALENS  68-109 PROTEIN PYSO3_DESAM HYPOTHETICALPROTEIN DESULFUROLOBUS AMBIVALENS  65-155 PYSP2_LEPIT HYPOTHETICALPROTEIN LEPTOSPIRA INTERROGANS   6-33  60-94 PYSR1_MYCMY HYPOTHETICALPROTEIN MYCOPLASMA MYCOIDES  35-99  185-227  300-327 PYSY3_BACSUHYPOTHETICAL 19.6 KD BACILLUS SUBTILIS  72-99 PROTEIN PYSYN_METFEHYPOTHETICAL PROTEIN METHANOTHERMUS FERVIDUS  78-105 PYT37_STRFRHYPOTHETICAL 37.1 KD STREPTOMYCES FRADIAE  246-273 PROTEIN PYTDK_BACSUHYPOTHETICAL 35.6 KD BACILLUS SUBTILIS  244-271  279-306 PROTEINPYTRE_LEPBI HYPOTHETICAL 22 KD LEPTOSPIRA BIFLEXA  84-113 PROTEINPYTRP_LACLA HYPOTHETICAL 13.3 KD LACTOCOCCUS LACTIS  76-112 PROTEINPYTS1_BACSU HYPOTHETICAL 20 KD BACILLUS SUBTILIS  37-64 PROTEINPYTSF_SPICI HYPOTHETICAL 23.8 KD SPIROPLASMA CITRI  102-149 PROTEINPYX04_BACSU HYPOTHETICAL 12.8 KD BACILLUS SUBTILIS  37-64  68-95 PROTEINPYX06_BACSU HYPOTHETICAL 21.0 KD BACILLUS SUBTILIS  142-169 PROTEINPYX13_BACSU HYPOTHETICAL 26.0 KD BACILLUS SUBTILIS  17-51 PROTEINPYX15_BACSU HYPOTHETICAL 61.8 KD BACILLUS SUBTILIS  165-207  262-289PROTEIN PYX18_BACSU HYPOTHETICAL 66.8 KD BACILLUS SUBTILIS   3-30  34-61 94-142 PROTEIN PYX19_BACSU HYPOTHETICAL 31.3 KD BACILLUS SUBTILIS 56-83  85-112 PROTEIN PYX20_BACSU HYPOTHETICAL 23.2 KD BACILLUSSUBTILIS  24-58 PROTEIN PYX12_ANASP HYPOTHETICAL 18.9 KD ANABAENA SP 77-104 PROTEIN PYXYB_CALSA HYPOTHETICAL 10.7 KD CALDOCELLUM   9-39PROTEIN SACCHAROLYTICUM PYXYC_CALSA HYPOTHETICAL PROTEIN CALDOCELLUM 41-94 SACCHAROLYTICUM PYZE1_ECOLI HYPOTHETICAL 16.7 KD ESCHERICHIA COLI 41-78 PROTEIN

TABLE IX 107 × 178 × 4 SEARCH MOTIF RESULTS SUMMARY FOR ALL HUMANPROTEINS PCGENE 107 × 178 × 4 Motif Search on All Human ProteinSequences FILE NAME PROTEIN AREA 1 AREA 2 AREA 3 AREA 4 AREA 5 AREA 6AREA 7 AREA 8 AREA 9 P143F_HUMAN 14-3-3 PROTEIN ETA (PROTEIN AS1)(FRAGMENT). 101-135 P143S_HUMAN 14-3-3 PROTEIN HOMOLOG STRATIFIN. 45-72P143T_HUMAN 14-3-3 PROTEIN THETA (14-3-3 PROTEIN T-CELL) (HS1 PROTEIN).61-92 P143Z_HUMAN 14-3-3 PROTEIN ZETA (PROTEIN KINASE C INHIBITOR 28-55PROTEIN-1) (KCIP-1) P1A23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-114 A-29 (AW-19) A*2901 ALPHA CHAIN P1A24_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 A-29 (AW-19) A*2902 ALPHA CHAINP1B02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 B-7 B*0702ALPHA CHAIN P1B05_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114148-182 B-13 B*1301 ALPHA CHAIN P1B10_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84-115 BW-75 (B-15) B*1502 ALPHA CHAINP1B11_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-72(BW-70) B*1503 ALPHA P1B12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 76-107 B-62 B*1504 ALPHA CHAIN P1B13_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84-115 B-18 B*1801 ALPHA CHAIN P1B21_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3501 ALPHA CHAINP1B22_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3502ALPHA CHAIN P1B23_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115B-35 B*3503 ALPHA CHAIN P1B24_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  76-107 B-35 B*3504 ALPHA CHAIN P1B25_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3505 ALPHA CHAIN P1B26_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3506 ALPHA CHAINP1B27_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-35 B*3507ALPHA CHAIN P1B28_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115B-35 B*3508 ALPHA CHAIN P1B29_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  88-115 B-37 B*3701 ALPHA CHAIN P1B32_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 B-39 B*3902 ALPHA CHAIN P1B33_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 60-91 BW-60 (B-40) B*4001 ALPHACHAIN P1B34_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-40B*4002 ALPHA CHAIN P1B35_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 B-40 B*4003 ALPHA CHAIN P1B36_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84-115 B-40 B*4004 ALPHA CHAIN P1B38_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 BW-41 B*4101 ALPHA CHAINP1B39_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-42 B*4201ALPHA CHAIN P1B40_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-111BW-44 (B-12) B*4401 ALPHA CHAIN P1B41_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 BW-44 (B-12) B*4402 ALPHA CHAINP1B42_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-44 (B-12)B*4403 ALPHA CHAIN P1B43_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 84-115 BW-45 (B-12) B*4501 ALPHA CHAIN P1B44_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 BW-46 B*4601 ALPHA CHAIN P1B45_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  88-115 BW-47 B*4701 ALPHA CHAINP1B46_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  84-115 B-48 B*4801ALPHA CHAIN P1B47_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114B-49 (B-21) B*4901 ALPHA CHAIN P1B48_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  84-115 BW-50 (B-21) B*5001 ALPHA CHAINP1B53_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-52 (B-5)B*5201 ALPHA CHAIN P1B55_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-54 (BW-22) B*5401 ALPHA P1B56_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 BW-55 (BW-22) B*5501 ALPHAP1B57_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 BW-55(BW-22) B*5502 ALPHA P1B58_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, 87-114 BW-56 (BW-22) B*5601 ALPHA P1B59_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 BW-56 (BW-22) B*5602 ALPHAP1C01_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-1 CW*0101ALPHA CHAIN P1C02_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114CW-1 CW*0102 ALPHA CHAIN P1C03_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  87-114 CW-2 CW*0201 ALPHA CHAIN P1C04_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 CW-2 CW*0202 ALPHA CHAIN P1C06_HUMANHLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-3 CW*0302 ALPHA CHAINP1C12_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114 CW-8 CW*0801ALPHA CHAIN P1C13_HUMAN HLA CLASS I HISTOCOMPATIBILITY ANTIGEN,  87-114CW-8 CW*0802 ALPHA CHAIN P1C14_HUMAN HLA CLASS I HISTOCOMPATIBILITYANTIGEN,  87-114 CW-8 CW*0803 ALPHA CHAIN P1C17_HUMAN HLA CLASS IHISTOCOMPATIBILITY ANTIGEN,  87-114 CW*1401 ALPHA CHAIN PRECURSORP25A6_HUMAN 69/71 KD (2′-5′) OLIGOADENYLATE 593-620 SYNTHETASEP2AAA_HUMAN PROTEIN PHOSPHATASE PP2A, 65 KD REGULATORY SUBUNIT, 12-4954-81 ALPHA ISOFORM P2AAB_HUMAN PROTEIN PHOSPHATASE PP2A, 65 KDREGULATORY SUBUNIT,  9-36 41-68  79-106 BETA ISOFORM P2ABA_HUMAN PROTEINPHOSPHATASE PP2A, 55 KD REGULATORY SUBUNIT, 177-218 ALPHA ISOFORMP411_HUMAN ERYTHROID PROTEIN 4.1 (BAND 4.1, ERTHROCYTE FORM). 32-66P412_HUMAN NON-ERYTHROID PROTEIN 4.1 (BAND 4.1, LYMPHOID FORM)  3-30708-735 P42_HUMAN ERYTHROCYTE MEMBRANE PROTEIN BAND 4.2 173-200 518-545P4F2_HUMAN 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN (4F2HC) 281-322(LYMPHOCYTE ACTIVATION P5H1E_HUMAN 5-HYDROXYTRYPTAMINE 1E RECEPTOR(5-HT-1E) (SEROTONIN 311-338 RECEPTOR) P5H1F_HUMAN 5-HYDROXYTRYPTAMINE1F RECEPTOR (5-HT-1F) (SEROTONIN 222-253 RECEPTOR) P5H2A_HUMAN5-HYDROXYTRYPTAMINE 2A RECEPTOR (5-HT-2A) (SEROTONIN 22-56 RECEPTOR)P5H7_HUMAN 5-HYDROXYTRYPTAMINE 7 RECEPTOR (5-HT-7) (5-HT-X) 72-99(SEROTONIN RECEPTOR) PA1AC_HUMAN ALPHA-1-ANTICHYMOTRYPSIN PRECURSOR(ACT).  98-132 330-357 PA1AG_HUMAN ALPHA-1-ACID GLYCOPROTEIN 1 PRECURSOR(OROSOMUCOID)  92-119 (OMD). PA1AT_HUMAN ALPHA-1-ANTITRYPSIN PRECURSOR(ALPHA-1 PROTEASE 168-202 INHIBITOR) (ALPHA-1- PA1AU_HUMANALPHA-1-ANTITRYPSIN-RELATED PROTEIN PRECURSOR. 163-197 PA2AP_HUMANALPHA-2-ANTIPLASMIN PRECURSOR (ALPHA-2-PLASMIN 191-218 365-395INHIBITOR) (ALPHA-2- PA2GL_HUMAN LEUCINE-RICH ALPHA-2-GLYCOPROTEIN(LRG). 104-134 PA2MG_HUMAN ALPHA-2-MACROGLOBULIN PRECURSOR (ALPHA-2-M).53-80 319-349 1085-1112 1402-1429 PA4_HUMAN ALZHEIMER'S DESEASE AMYLOIDA4 PROTEIN PRECURSOR 428-455 (PROTEASE NEXIN-11) PAACT_HUMANALPHA-ACTININ (F-ACTIN CROSS LINKING PROTEIN).  92-119 720-747PAATM_HUMAN ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL 109-136 PRECURSOR(EC 2.6.1.1) PABP2_HUMAN ENDOTHELIAL ACTIN-BINDING PROTEIN (ABP-280)61-88 119-147 2604-2633 (NONMUSCLE FILAMIN) PAC12_HUMAN ACTIVATOR 1 37KD SUBUNIT (REPLICATION FACTOR C 37 306-333 KD SUBUNIT) (A1 PAC15_HUMANACTIVATOR 1 140 KD SUBUNIT (REPLICATION FACTOR C 14-51 182-209 668-700LARGE SUBUNIT) (A1 PACDL_HUMAN ACYL-COA DEHYDROGENASE PRECURSOR,LONG-CHAIN  78-108 179-206 313-340 SPECIFIC (EC 1.3.99.13) PACET_HUMANANGIOTENSIN-CONVERTING ENZYME PRECURSOR, TESTIS-  78-115 126-153 676-710SPECIFIC (EC 3.4.15.1) PACE_HUMAN ANGIOTENSIN-CONVERTING ENZYMEPRECURSOR, SOMATIC 652-689 700-727 1250-1284 (EC 3.4.15.1) (ACE)PACHA_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA CHAIN 48-80 PRECURSOR.PACHE_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, EPSILON CHAIN 46-98PRECURSOR. PACHG_HUMAN ACETYLCHOLINE RECEPTOR PROTEIN, GAMMA CHAIN 45-79304-331 PRECURSOR. PACHP_HUMAN NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN,BETA-4 29-56 70-97 CHAIN (FRAGMENT) PACRO_HUMAN ACROSIN PRECURSOR (EC3.4.21.10). 112-149 PACYM_HUMA ACYLPHOSPHATASE, MUSCLE TYPE ISOZYME (EC3.6.1.7) 26-53 (ACYLPHOSPHATE PADT2_HUMAN ADP,ATP CARRIER PROTEIN,FIBROBLAST ISOFORM 162-189 (ADP/ATP TRANSLOCASE 2) PADT3_HUMAN ADP,ATPCARRIER PROTEIN, LIVER ISOFORM T2 (ADP/ATP 163-190 TRANSLOCASE 3)PAK79_HUMAN A-KINASE ANCHOR PROTEIN 79 (AKAP 79) (CAMP-DEPENDENT 197-238381-414 PROTEIN KINASE PALFA_HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC4.1.2.13) A 36-63 (MUSCLE). PALFB_HUMAN FRUCTOSE-BISPHOSPHATE ALDOLASE(EC 4.1.2.13) B  79-113 (LIVER). PAMD1_HUMAN AMP DEAMINASE 1 (EC3.5.4.6) (MYOADENYLATE 59-86 DEAMINASE) (AMP DEAMINASE PAMD3_HUMAN AMPDEAMINASE 3 (EC 3.5.4.6) (AMP DEAMINASE 49-76 ISOFORM E). PAMPN_HUMANAMINOPEPTIDASE N (EC 3.4.11.2) (MICROSOMAL 492-523 604-648 926-964AMINOPEPTIDASE) (GP150) PAMPR_HUMAN AMPHIREGULIN PRECURSOR (AR). 213-247PAMRP_HUMAN ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN 173-236263-290 PRECURSOR PANFB_HUMAN BRAIN NATRIURETIC PEPTIDE PRECURSOR 36-63PANK1_HUMAN ANKYRIN R (ANKYRINS 2.1 AND 2.2) (ERYTHROCYTE 812-8391004-1031 1617-1644 ANKYRIN) PANKB_HUMAN ANKYRIN, BRAIN VARIANT 1(ANKYRIN B) (ANKYRIN, 1544-1571 NONERYTHROID) PANKC_HUMAN ANKYRIN, BRAINVARIANT 2 (ANKYRIN B) (ANKYRIN, 1811-1838 NONERYTHROID) PANPA_HUMANATRIAL NATRIURETIC PEPTIDE RECEPTOR A PRECURSOR 553-580 825-852 (ANP-A)(ANPRA) (GC-A) PANPB_HUMAN ATRIAL NATRIURETIC PEPTIDE RECEPTOR BPRECURSOR 810-837 (ANP-B) (ANPRB) (GC-B) PANT3_HUMAN ANTITHROMBIN-IIIPRECURSOR (ATIII). 162-196 PANX2_HUMAN ANNEXIN II (LIPOCORTIN II)(CALPACTIN I HEAVY 40-67 306-333 CHAIN) (CHROMOBINDIN 8) PANX3_HUMANANNEXIN III (LIPOCORTIN III) (PLACENTAL 215-242 ANTICOAGULANT PROTEINIII) PANX6_HUMAN ANNEXIN VI (LIPOCORTIN VI) (P68) (P70) (PROTEIN 60-87626-653 III) (CHROMOBINDIN 20) PANXI_HUMAN ANNEXIN, INTESTINE-SPECIFIC(ISA). 37-78 137-164 PAOFA_HUMAN AMINE OXIDASE (FLAVIN-CONTAINING) A (EC1.4.3.4) 16-43  74-104 (MONOAMINE OXIDASE) PAOFB_HUMAN AMINE OXIDASE(FLAVIN-CONTAINING) B (EC 1.4.3.4) 68-95 (MONOAMINE OXIDASE) PAPA1_HUMANAPOLIPOPROTEIN A-I PRECURSOR (APO-AI). 57-84 585-619 PAPB_HUMANAPOLIPOPROTEIN B-100 PRECURSOR (APO B-100/APO B-48). 1073-1100 1353-13801524-1584 2074-2113 2132-2159 2181-2215 2240-2271 2360-2389 2466-25072529-2559 2850-3000 3360-3390 3480-3570 3620-3654 4040-4074 4090-41204135-4167 4274-4301 4397-4438 4465-4492 4499-4544 PAPC2_HUMANAPOLIPOPROTEIN C-II PRECURSOR (APO-CII). 36-63 PAPC_HUMAN ADENOMATOUSPOLYPOSIS COLI PROTEIN (APC PROTEIN) 145-172 617-651 834-861 1795-18222172-2212 2572-2609 PAPE_HUMAN APOLIPOPROTEIN E PRECURSOR (APO-E). 48-81247-274 PAPOA_HUMAN APOLIPOPROTEIN (A) PRECURSOR (EC 3.4.21.-) 4448-4475(APO (A)) (LP (A)) PAQP1_HUMAN AQUAPORIN-CHIP (WATER CHANNEL PROTEIN FORRED BLOOD 39-73 CELLS AND KIDNEY PARK1_HUMAN BETA-ADRENERGIC RECEPTORKINASE 1 (EC 2.7.1.126) 523-553 (BETA-ARK-1). PARLY_HUMANARGININOSUCCINATE LYASE (EC 4.3.2.1)  69-103 (ARGINOSUCCINASE).PARNT_HUMAN ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR 223-250 (ARNTPROTEIN) (DIO PARRC_HUMAN BETA-ARRESTIN 2. 215-242 305-332 PARRS_HUMANARRESTIN (RETINAL S-ANTIGEN) (48 KD PROTEIN) (S-AG). 299-352 PARY1_HUMANARYLAMINE N-ACETYLTRANSFERASE, MONOMORPHIC  7-34 (EC 2.3.1.5) (MNAT).PARY2_HUMAN ARYLAMINE N-ACETYLTRANSFERASE, POLYMORPHIC  7-34 (EC2.3.1.5) (PNAT). PASNS_HUMAN ASPARAGINE SYNTHETASE(GLUTAMINE-HYDROLYZING) 311-338 347-374 (EC 6.3.5.4) (TS11 CELLPATCD_HUMAN CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC RETICULUM 163-190TYPE (EC 3.6.1.38). PATCE_HUMAN CALCIUM-TRANSPORTING ATPASE ENDOPLASMICRETICULUM 163-190 TYPE (EC 3.6.1.38). PATF1_HUMAN TRANSCRIPTION FACTORATF-1 (FRAGMENT) 203-230 PATF3_HUMAN TRANSCRIPTION FACTOR ATF-3(FRAGMENT). 155-183 PATF5_HUMAN TRANSCRIPTION FACTOR ATF-5 (FRAGMENT)30-61 PATF6_HUMAN TRANSCRIPTION FACTOR ATF-6 (FRAGMENT). 34-68PATFA_HUMAN TRANSCRIPTION FACTOR ATF-A AND AFT-A-DELTA. 351-394PATPF_HUMAN ATP SYNTHASE B CHAIN, MITOCHONDRIAL PRECURSOR 129-163 (EC3.6.1.34). PB232_HUMAN NUCLEOLAR PHOSPHOPROTEIN B23 (NUCLEOPHOSMIN)114-141 (NUMATRIN). PB2AR_HUMAN BETA-2-ADRENERGIC RECEPTOR. 292-319345-372 PB3A2_HUMAN ANION EXCHANGE PROTEIN 2 (NON-ERYTHROID BAND1081-1111 3-LIKE PROTEIN) (BND3L). PB94_HUMAN B94 PROTEIN. 115-142525-562 609-636 PBAN7_HUMAN ERYTHROCYTE BAND 7 INTEGRAL MEMBRANEPROTEIN. 106-140 PBASO_HUMAN BASONUCLIN. 120-147 310-337 773-807PBC2B_HUMAN TRANSFORMING PROTEIN BCL-2-BETA. 178-205 PBCGF_HUMAN B-CELLGROWTH FACTOR PRECURSOR (BCGF-12 KD). 33-63 PBCR_HUMAN BREAKPOINTCLUSTER REGION PROTEIN. 784-825 PBGLR_HUMAN BETA-GLUCURONIDASE PRECURSOR(EC 3.2.1.31). 246-280 504-531 PBMP2_HUMAN BONE MORPHOGENETIC PROTEIN 2PRECURSOR (BMP-2) 216-250 (BMP-2A). PBMP5_HUMAN BONE MORPHOGENETICPROTEIN 5 PRECURSOR (BMP-5). 202-229 PBMP6_HUMAN BONE MORPHOGENETICPROTEIN 6 PRECURSOR (BMP-6). 274-301 PBMP7_HUMAN BONE MORPHOGENETICPROTEIN 7 PRECURSOR (BMP-7). 192-219 (OSTEOGENIC PROTEIN 1) PBN51_HUMANBN51 PROTEIN. 284-311 PBPI_HUMAN BACTERICIDAL PERMEABILITY INCREASINGPROTEIN 168-195 PRECURSOR (BPI) (CAP 57). PBRS3_HUMAN BOMBESIN RECEPTORSUBTYPE-3 (BRS-3). 10-37 PBTF2_HUMAN BASIC TRANSCRIPTION FACTOR 62 KDSUBUNIT (P62). 128-162 353-385 PBTG1_HUMAN BTG1 PROTEIN (B-CELLTRANSLOCATION GENE 1 PROTEIN). 26-53 PC1TC_HUMAN C-1-TETRAHYDROFOLATESYNTHASE, CYTOPLASMIC 330-363 (METHYLENETETRAHYDROFO PC2TA_HUMAN MHCCLASS II TRANSACTIVATOR CIITA. 921-948 PCA19_HUMAN COLLAGEN ALPHA 1 (IX)CHAIN PRECURSOR. 120-150 PCA1B_HUMAN COLLAGEN ALPHA 1 (XI) CHAINPRECURSOR. 341-368 PCABV_HUMAN CALBINDIN (VITAMIN D-DEPENDENTCALCIUM-BINDING 27-54 PROTEIN (CABP), AVIAN- PCAD5_HUMAN CADHERIN 5PRECURSOR (7B4 ANTIGEN). 723-750 PCADE_HUMAN EPITHELIAL-CADHERINPRECURSOR (E-CADHERIN) 838-865 (UVOMORULIN) (CAM 120/80) PCADN_HUMANNEURAL-CADHERIN PRECURSOR (N-CADHERIN).  95-122 323-350 PCADP_HUMANPLACENTAL-CADHERIN PRECURSOR (P-CADHERIN). 384-411 580-607 PCAGA_HUMANCALGRANULIN A (MIGRATION INHBITORY FACTOR-RELATED  2-29 PROTEIN 8)(MRP-8) PCALR_HUMAN CALCITONIN RECEPTOR PRECURSOR (CT-R). 140-167PCAMA_HUMAN CARTILAGE MATRIX PROTEIN PRECURSOR. 297-324 467-494PCAP1_HUMAN CALPAIN 1, LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 561-588(CALCIUM-ACTIVATED PCAP2_HUMAN CALPAIN 2, LARGE (CATALYTIC) SUBUNIT (EC3.4.22.17) 257-284 502-529 (CALCIUM-ACTIVATED PCAP3_HUMAN CALPAIN P94,LARGE (CATALYTIC) SUBUNIT (EC 3.4.22.17) 674-701 (CALCIUM- PCAPL_HUMANPLACENTAL CALCIUM-BINDING PROTEIN. 13-40 PCAP_HUMAN ADENYLYLCYCLASE-ASSOCIATED PROTEIN (CAP). 111-138 163-197 321-355 PCART_HUMANCALRETININ (29 KD CALBINDIN) 217-244 PCASB_HUMAN BETA CASEIN PRECURSOR.14-48 PCATA_HUMAN CATALASE (EC 1.11.1.6). 422-456 PCATD_HUMAN CATHEPSIND PRECURSOR (EC 3.4.23.5) 253-282 PCATH_HUMAN CATHEPSIN H PRECURSOR (EC3.4.22.16) 41-68 PCATL_HUMAN CATHEPSIN L PRECURSOR (EC 3.4.22.15) (MAJOR278-305 EXCRETED PROTEIN) (MEP) PCATS_HUMAN CATHEPSIN S PRECURSOR (EC3.4.22.27). 30-57 142-169 PCBFB_HUMAN CCAAT-BINDING TRANSCRIPTION FACTORSUBUNIT B (CBF-B) 24-58 138-165 (NF-Y PROTEIN PCBG_HUMANCORTICOSTEROID-BINDING GLOBULIN PRECURSOR (CBG)  88-122 (TRANSCORTIN)PCBPB_HUMAN CARBOXYPEPTIDASE B PRECURSOR (EC 3.4.17.2)  69-129 278-305319-346 (PANCREAS-SPECIFIC PROTEIN) PCBPH_HUMAN CARBOXYPEPTIDASE HPRECURSOR (EC 3.4.17.10) 355-382 (CARBOXYPEPTIDASE E) (CPE) PCC21_HUMANCDC21 HOMOLOG (P1-CDC21) (FRAGMENT). 35-62 PCC27_HUMAN PROTEIN CDC27HS.209-240 PCCG1_HUMAN TRANSCRIPTION INITIATION FACTOR TFIID 250 KD1298-1342 SUBUNIT (TBP-ASSOCIATED PCD14_HUMAN MONOCYTE DIFFERENTIATIONANTIGEN CD14 PRECURSOR 142-169 (MYELOID CELL-SPECIFI PCD1A_HUMAN T-CELLSURFACE GLYCOPROTEIN CD1A PRECURSOR (CD1A 32-63 281-308 ANTIGEN) (T-CELLPCD1E_HUMAN T-CELL SURFACE CLYCOPROTEIN CD1E PRECURSOR (CD1E  71-104ANTIGEN) (R2G1). PCD20_HUMAN B-LYMPHOCYTE ANTIGEN CD20 (B-LYMPHOCYTESURFACE 226-255 ANTIGEN B1) (LEU-16) PCD2R_HUMAN CD20 RECEPTORPRECURSOR. 226-255 PCD2_HUMAN T-CELL SURFACE ANTIGEN CD2 PRECURSOR(T-CELL SURFACE  88-119 ANTIGEN PCD34_HUMAN HEMOPOIETIC PROGENITOR CELLANTIGEN CD34 PRECURSOR  74-108 PCD37_HUMAN LEUKOCYTE ANTIGEN CD37.101-128 PCD3G_HUMAN T-CELL SURFACE GLYCOPROTEIN CD3 GAMMA CHAIN  7-34PRECURSOR (T-CELL RECEPT PCD3L_HUMAN CD30 LIGAND (CD30-L).  96-130183-217 PCD4X_HUMAN CD44 ANTIGEN, EPITHELIAL FORM PRECURSOR (CD44E)328-355 (PHAGOCYTIC PCD4_HUMAN T-CELL SURFACE GLYCOPROTEIN CD4 PRECURSOR(T-CELL 44-71 240-267 SURFACE ANTIGEN PCD53_HUMAN LEUKOCYTE SURFACEANTIGEN CD53.  87-114 PCD72_HUMAN B-CELL DIFFERENTIATION ANTIGEN CD72(LYB-2). 118-177 PCDK3_HUMAN CELL DIVISION PROTEIN KINASE 3 (EC2.7.1.-).  5-32 PCDK5_HUMAN CELL DIVISION PROTEIN KINASE 5 (EC 2.7.1.-)(KINASE  5-32 PSSALRE). PCEBB_HUMAN CCAAT/ENHANCER BINDING PROTEIN BETA(C/EBP BETA) 296-330 (NUCLEAR FACTOR PCENB_HUMAN MAJOR CENTROMEREAUTOANTIGEN B (CENTROMERE 568-595 PROTEIN B) (CENP-B). PCENC_HUMANCENTROMERE PROTEIN C (CENP-C) (CENTROMERE 433-460 AUTOANTIGEN C).PCENE_HUMAN CENTROMERIC PROTEIN E (CENP-E PROTEIN). 372-399 493-520553-607 715-752 767-825 850-884 903-947 963-995 1080-1107 1122-11491179-1239 1250-1277 1340-1367 1440-1481 1486-1556 1646-1680 1684-17241808-1846 1852-1883 1890-1917 1940-1988 2021-2048 2288-2318 2440-24782498-2563 PCERU_HUMAN CERULOPLASMIN PRECURSOR (EC 1.16.3.1)(FERROXIDASE). 913-940 PCETP_HUMAN CHOLESTERYL ESTER TRANSFER PROTEINPRECURSOR  71-108 PCFTR_HUMAN CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE158-189 802-829 895-922 1243-1270 REGULATOR (CFTR). PCGCC_HUMANCGMP-GATED CATION CHANNEL PROTEIN (CYCLIC NUCLEOTIDE 216-243 PCGL_HUMANCYSTATHIONINE GAMMA-LYASE (EC 4.4.1.1). 315-349 PCHLR_HUMAN CHLORDECONEREDUCTASE (EC 1.1.1.225) (CDR). 17-51 PCHOL_HUMAN CHOROIDERAEMIA-LIKEPROTEIN. 56-97 230-257 451-478 PCHOR_HUMAN CHOROIDERAEMIA PROTEIN (TCDPROTEIN). 112-139 PCINA_HUMAN SODIUM CHANNEL PROTEIN, CARDIAC ANDSKELETAL MUSCLE 787-814 943-970 ALPHA-SUBUNIT PCLCA_HUMAN CLATHRIN LIGHTCHAIN A (BRAIN AND LYMPHOCYTE LCA). 121-148 PCLCB_HUMAN CLATHRIN LIGHTCHAIN B (BRAIN AND LYMPHOCYTE LCB). 123-157 PCLCY_HUMAN CALCYCLIN(PROLACTIN RECEPTOR ASSOCIATED PROTEIN)  9-50 (PRA) (GROWTH PCLUS_HUMANCLUSTERIN PRECURSOR (COMPLEMENT-ASSOCIATED PROTEIN 36-98 323-350 367-394SP-40,40) PCMGA_HUMAN CHROMOGRANIN A PRECURSOR (CGA) (CONTAINS:  93-120430-457 PANCREASTATIN AND WE-14) PCNTF_HUMAN CILIARY NEUROTROPHIC FACTOR(CNTF). 66-93 PCO02_HUMAN TUMOR-ASSOCIATED ANTIGEN CO-029. 29-56  95-148PCO3_HUMAN COMPLEMENT C3 PRECURSOR. 242-276 593-620 837-867 PCO4_HUMANCOMPLEMENT C4 PRECURSOR. 1292-1319 PCO5_HUMAN COMPLEMENT C5 PRECURSOR.298-342 537-564 970-997 1270-1304 PCO6_HUMAN COMPLEMENT C6 PRECURSOR.367-398 PCO7_HUMAN COMPLEMENT C7 PRECURSOR. 225-261 PCOX1_HUMANCYTOCHROME C OXIDASE POLYPEPTIDE I (EC 1.9.3.1). 353-380 PCP70_HUMANCYTOCHROME P450 VII (CHOLESTEROL 7-ALPHA- 263-290 346-373 MONOOXYGENASE)PCPCH_HUMAN CYTOCHROME P450 IIC17 (EC 1.14.14.1) (P450-254C) 109-136(FRAGMENT). PCPE1_HUMAN CYTOCHROME P450 IIE1 (EC 1.14.14.1) (P450-J)231-258 (ETHANOL INDUCIBLE). PCPSM_HUMAN CARBAMOYL-PHOSPHATE SYNTHASE(AMMONIA) 112-146 420-447 MITOCHONDRIAL PRECURSOR PCPT2_HUMANMITOCHONDRIAL CARNITINE PALMITOYLTRANSFERASE II 410-437 PRECURSORPCPT7_HUMAN CYTOCHROME P450 XVIIA1 (P450-C17) (EC 1.14.99.9) 226-257(STERIOD 17-ALPHA- PCPV1_HUMAN CYTOCHROME P450 XIXA1 (AROMATASE) (EC1.14.14.1) 234-271 (ESTROGEN PCR2_HUMAN COMPLEMENT RECEPTOR TYPE 2PRECURSOR (CR2)  986-1013 (COMPLEMENT C3D RECEPTOR) PCRCM_HUMANCOLORECTAL MUTANT CANCER PROTEIN (MCC PROTEIN).  68-126 379-420 633-678724-754 763-790 PCREB_HUMAN CAMP RESPONSE ELEMENT BINDING PROTEINS A ANDB  94-125 (CREB-A AND CREB-B). PCREP_HUMAN CAMP RESPONSE ELEMENT BINDINGPROTEIN CRE-BP1. 380-414 PCRP_HUMAN C-REACTIVE PROTEIN PRECURSOR. 60-87150-177 PCS1_HUMAN CLEAVAGE SIGNAL-1 PROTEIN (CS-1). 203-233 PCSF1_HUMANMICROPHAGE COLONY STIMULATING FACTOR-1 PRECURSOR 143-170 (CSF-1) (MCSF).PCST3_HUMAN CLEAVAGE STIMULATION FACTOR, 50 KD SUBUNIT (CSTF 50  6-33 KDSUBUNIT) (CF-1 PCTNA_HUMAN ALPHA-CATENIN (CADHERIN-ASSOCIATED PROTEIN).681-718 PCTNR_HUMAN ALPHA-CATENIN RELATED PROTEIN (CATENIN ALPHA-2).680-717 PCX26_HUMAN GAP JUNCTION BETA-2 PROTEIN (CONNEXIN 26) (CX26).108-139 PCX32_HUMAN GAP JUNCTION BETA-1 PROTEIN (CONNEXIN 32) (CX32)117-144 (GAP JUNCTION 28 KD PCX37_HUMAN GAP JUNCTION ALPHA-4 PROTEIN(CONNEXIN 37) (CX37).  88-115 PCYB5_HUMAN CYTOCHROME B5.  3-42PCYG1_HUMAN GUANYLATE CYCLASE SOLUBLE, BETA-1 CHAIN (EC 4.6.1.2)  80-107126-153 352-396 (70 KD CHAIN) PCYG4_HUMAN GUANYLATE CYCLASE SOLUBLE,ALPHA-2 CHAIN (EC 4.6.1.2). 106-133 PCYGR_HUMAN RETINAL GUANYLYL CYCLASEPRECURSOR (EC 4.6.1.2). 824-851 PCYRG_HUMAN CYTOKINE RECEPTOR COMMONGAMMA CHAIN PRECURSOR 293-320 (GAMMA-C) PCYTA_HUMAN CYSTATIN A (STEFINA) (CYSTATIN AS). 27-58 PDBL_HUMAN PROTO-ONCOGENE DBL PRECURSOR(CONTAINS: MCF2). 233-283 485-524 766-793 801-845 PDESM_HUMAN DESMIN.153-180 272-312 PDESP_HUMAN DESMOPLAKIN I AND II (DPI AND DPII)(FRAGMENT). 31-79 113-143 217-244 269-317 382-434 437-467 528-558563-598 630-674 697-734 738-789 1456-1493 1508-1535 PDHAP_HUMAN ALDEHYDEDEHYDROGENASE, DIMERIC NADP-PREFERRING 31-58 (EC 1.2.1.5) PDMD_HUMANDYSTROPHIN  86-116 338-365 484-511 753-780  976-1003 1012-1039 1201-12281364-1394 1615-1674 1838-1865 2158-2185 2313-2343 2752-2779 2786-28302912-2958 3014-3041 3499-3533 PDNJI_HUMAN DNAJ PROTEIN HOMOLOG. 45-76PDNLI_HUMAN DNA LIGASE I (EC 6.5.1.1) (POLYDEOXYRIBONUCLEOTIDE 130-157355-392 732-759 SYNTHASE (ATP)). PDPOA_HUMAN DNA POLYMERASE ALPHA (EC2.7.7.7). 25-74 1009-1057 1100-1127 PDPOD_HUMAN DNA POLYMERASE DELTACATALYTIC CHAIN (EC 2.7.7.7) 729-756 PDPP4_HUMAN DIPEPTIDYL PEPTIDASE IV(EC 3.4.14.5) (DPP IV) 29-77 114-148 (T-CELL ACTIVATION PDRN1_HUMANDEOXYRIBONCULEASE I PRECURSOR (EC 3.1.21.1) 44-71 (DNASE I). PDSC2_HUMANDESMOCOLLIN 3A/3B PRECURSOR (DESMOSOMAL  80- 107 355-398 GLYCOPROTEIN IIAND III). PDSG1_HUMAN DESMOGLEIN 1 PRECURSOR (DESMOSOMAL GLYCOPROTEIN 1)15-42 271-298 497-531 (DG1). PDSG3_HUMAN DEXMOGLEIN 3 PRECURSOR (130 KDPEMPHIGUS VULGARIS 211-248 325-352 ANTIGEN) (PVA). PDUG_HUMAN DIVERGENTUPSTREAM PROTEIN (DUP) 584-618 PEAR1_HUMAN V-ERBA RELATED PROTEIN EAR-1.523-550 PEBI2_HUMAN EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 2 (EBI2).44-78 PEF1B_HUMAN ELONGATION FACTOR 1-BETA (EF-1-BETA). 105-132PEF1D_HUMAN ELONGATION FACTOR 1-DELTA (EF-1-DELTA).  84-118 PEGFR_HUMANEPIDERMAL GROWTH FACTOR RECEPTOR PRECURSOR 64-91 440-467 (EC 2.7.1.112).PEGF_HUMAN EPIDERMAL GROWTH FACTOR PRECURSOR, KIDNEY (EGF) 47-74(UROGASTRONE). PELF1_HUMAN ETS-RELATED TRANSCRIPTION FACTOR ELF-1.551-588 PENPL_HUMAN ENDOPLASMIN PRECURSOR (94 KD GLUCOSE-REGULATED 47-74246-273 PROTEIN) (GRP94) (GP96 PENV1_HUMAN RETORVIRUS-RELATED ENVPOLYPROTEIN. 382-420 PEPC_HUMAN IG EPSILON CHAIN C REGION. 161-188PEPMO_HUMAN EPIMORPHIN. 35-62 67-94 249-283 PER72_HUMAN PROTEINDISULFIDE ISOMERASE-RELATED PROTEIN PRECURSOR 58-85 142-169 458-485(ERP72). PERC1_HUMAN DNA EXCISION REPAIR PROTEIN ERCC-1. 240-270PERC6_HUMAN EXCISION REPAIR PROTEIN ERCC-6 160-209 939-973 PESTR_HUMANESTROGEN RECEPTOR (ER). 451-488 PET2_HUMAN ENDOTHELIN-2 PRECURSOR(ET-2). 133-160 PET3_HUMAN ENDOTHELIN-3 PRECURSOR (ET-3). 182-209PEV2A_HUMAN EVI2A PROTEIN PRECURSOR. 29-56 PEZRI_HUMAN EZRIN (P81)(CYTOVILLIN) (VILLIN-2). 119-146 351-392 402-429 512-539 PFA5_HUMANCOAGULATION FACTOR V PRECURSOR. 2103-2137 PFA8_HUMAN COAGULATION FACTORVIII PRECURSOR (PROCOAGULANT 871-908 1007-1034 1194-1230 COMPONENT).PFA9_HUMAN COAGULATION FACTOR IX PRECURSOR (EC 3.4.21.22) 271-298(CHRISTMAS FACTOR). PFABI_HUMAN FATTY ACID-BINDING PROTEIN, INTESTINAL. 98-125 PFASA_HUMAN APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS PRECURSOR23-50 249-301 306-333 (APO-1 ANTIGEN). PFCE2_HUMAN LOW AFFINITYIMMUNOGLOBULIN EPSILON FC RECEPTOR  81- 115 (LYMPHOCYTE IGE PFCEA_HUMANHIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR ALPHA- 140-174 SUBUNIT(FCERI) PFGR2_HUMAN FIBROBLAST GROWTH FACTOR RECEPTOR 310-337 2PRECURSOR (EC 2.7.1.112). PFIBA_HUMAN FIBRINOGEN ALPHA CHAIN PRECURSOR.131-165 427-457 PFIBB_HUMAN FIBRINOGEN BETA CHAIN PRECURSOR. 149-186PFIBG_HUMAN FIBRINOGEN GAMMA-A CHAIN PRECURSOR. 59-93 125-160PFIBH_HUMAN FIBRINOGEN GAMMA-G CHAIN (FIBRINOGEN GAMMA′). 59-93 125-160PFINC_HUMAN FIBRONECTIN PRECURSOR. 2168-2199 PFLI1_HUMAN FLI-1 ONCOGENE(ERGB TRANSCRIPTION FACTOR). 172-209 PFMO3_HUMAN DIMETHYLANILINEMONOOXYGENASE (N-OXIDE FORMING) 3 184-218 256-283 301-328 (EC 1.14.13.8)PFOS_HUMAN P55-C-FOS PROTO-ONCOGENE PROTEIN. 162-193 PFRA1_HUMANFOS-RELATED ANTIGEN 1. 133-168 PFRA2_HUMAN FOS-RELATED ANTIGEN 2.149-180 PFRIH_HUMAN FERRITIN HEAVY CHAIN.  7-34 PFRIL_HUMAN FERRITINLIGHT CHAIN.  3-33 PFSHR_HUMAN FOLLICLE STIMULATING HORMONE RECEPTORPRECURSOR 364-395 (FSH-R). PFUCO_HUMAN TISSUE ALPHA-L-FUCOSIDASEPRECURSOR (EC 3.2.1.51) 308-335 (ALPHA-L-FUCOSIDASE PFUMH_HUMAN FUMARATEHYDRATASE, MITOCHONDRIAL (EC 4.2.1.2) 424-451 (FUMARASE). PG0S2_HUMANPUTATIVE LYMPHOCYTE G0/G1 SWITCH PROTEIN. 56-83 PG19P_HUMAN PROTEINKINASE C SUBSTRATE, 80 KD PROTEIN, HEAVY 146-173 CHAIN (PKCSH)PG6PI_HUMAN GLUCOSE-6-PHOSPHATE ISOMERASE (GPI) (EC 5.3.1.9) 16-50(PHOSPHOGLUCOSE PG732_HUMAN MAJOR GASTROINTESTINAL TUMOR-ASSOCIATEDPROTEIN 181-215 GA733-2 PRECURSOR PGA12_HUMAN GALACTOKINASE 2 (EC2.7.1.6). 254-281 PGAA1_HUMAN GAMMA-AMINOBUTYRIC-ACID RECEPTOR ALPHA-1SUBUNIT 210-237 PRECURSOR (GABA(A) PGAA3_HUMAN GAMMA-AMINOBUTYRIC-ACIDRECEPTOR ALPHA-3 SUBUNIT 211-255 PRECURSOR (GABA(A) PGASR_HUMANGASTRIN/CHOLECYSTOKININ TYPE B RECEPTOR (CCK-B  75-105 RECEPTOR).PGB01_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA 22-49SUBUNIT 1. PGB02_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(O), ALPHA22-49 SUBUNIT 2. PGBAK_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(K),ALPHA 22-49 SUBUNIT (G(I) ALPHA-3). PGBAS_HUMAN GUANINENUCLEOTIDE-BINDING PROTEIN G(S), ALPHA  7-34 SUBUNIT (ADENYLATEPGBAY_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEIN G(Y), ALPHA  95-122SUBUNIT (ALPHA-11). PGBB3_HUMAN GUANINE NUCLEOTIDE-BINDING PROTEING(I)/G(S)/G(T) 65-92 BETA SUBUNIT 3 PGBLP_HUMAN GUANINENUCLEOTIDE-BINDING PROTEIN BETA 110-137 255-282 289-316 SUBUNIT-LIKEPROTEIN 12.3. PGBP2_HUMAN INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 2454-488 (GUANINE NUCLEOTIDE- PGBT2_HUMAN GUANINE NUCLEOTIDE-BINDINGPROTEIN G(T), ALPHA-2 22-49 SUBUNIT (TRANSDUCIN PGCF_HUMAN GC-RICHSEQUENCE DNA-BINDING FACTOR (GCF) 200-227 293-320 367-394 396-423647-674 (TRANSCRIPTION FACTOR 9) PGCH1_HUMAN GTP CYCLOHYDROLASE I (EC3.5.4.16). 165-192 PGCRA_HUMAN GLUCOCORTICOID RECEPTOR, ALPHA (GR).167-194 PGCRB_HUMAN GLUCOCORTICOID RECEPTOR, BETA (GR). 167-194PGCSP_HUMAN GLYCINE DEHYDROGENASE (DECARBOXYLATING) PRECURSOR 460-487(EC 1.4.4.2) PGDN_HUMAN GLIA DERIVED NEXIN (GDN) (PROTEASE NEXIN I). 83-110 PGELS_HUMAN GELSOLIN PRECURSOR, PLASMA (ACTIN-DEPOLYMERIZING701-728 FACTOR) (ADF) PGFAP_HUMAN GLIAL FIBRILLARY ACIDIC PROTEIN,ASTROCYTE. 189-216 349-376 384-411 PGL6S_HUMANN-ACETYLGLUCOSAMINE-6-SULFATASE PRECURSOR 170-221 (EC 3.1.6.14) (G6S)PGLPK_HUMAN GLYCEROL KINASE (EC 2.7.1.30) (APT: GLYCEROL  78-112 251-2783-PHOSPHOTRANSFERASE) PGLY1_HUMAN SERINE HYDROXYMETHYLTRANSFERASE,CYTOSOLIC 32-59 344—371 (EC 2.1.2.1) (SERINE PGLY2_HUMAN SERINEHYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL 417-444 (EC 2.1.2.1) (SERINEPGR78_HUMAN 78 KD GLUCOSE REGULATED PROTEIN PRECURSOR (GRP 78) 564-591598-625 (IMMUNOGLOBULIN PGRA2_HUMAN GLYCINE RECEPTOR ALPHA-2 CHAINPRECURSOR. 142-169 341-368 PGRAV_HUMAN GRAVIN (FRAGMENT).  9-43 61-88PGRFR_HUMAN GROWTH HORMONE-RELEASING HORMONE RECEPTOR 128-155 PRECURSOR(GHRH RECEPT PGTH2_HUMAN GLUTATHIONE S-TRANSFERASE HA SUBUNIT 2 64-91(EC 2.5.1.18) (GTH2) (CLASS- PGTPA_HUMAN GTPASE-ACTIVATING PROTEIN (GAP)(RAS P21 PROTEIN 474-501 1012-1047 ACTIVATOR). PGTR1_HUMAN GLUCOSETRANSPORTER TYPE 1, ERYTHROCYTE/BRAIN. 274-301 PGTR3_HUMAN GLUCOSETRANSPORTER TYPE 3, BRAIN. 272-299 PGTR4_HUMAN GLUCOSE TRANSPORTER TYPE4, INSULIN-RESPONSIVE. 290-317 PH10_HUMAN ISTONE H1′. 44-89 PH1A_HUMANHISTONE H1A (H1.1).  73-104 PH1B_HUMAN HISTONE H1B (H1.4).  70-101PH1C_HUMAN HISTONE H1C (H1.3).  71-102 PH1D_HUMAN HISTONE H1D (H1.2). 70-101 PH1T_HUMAN HISTONE H1T.  74-105 PH2B0_HUMAN HISTONE H2B.1. 20-47PH2B2_HUMAN HISTONE H2B.2. 20-47 PH2B_HUMAN HISTONE H2B (H2B.1 A). 20-47PHA25_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(5) 142-169 ALPHACHAIN PRECURSOR PHB2K_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN,DR-W53 56-83 BETA CHAIN PRECURSOR PHB2P_HUMAN HLA CLASS IIHISTOCOMPATIBILITY ANTIGEN, DP(W4) 50-77 BETA CHAIN PRECURSORPHB2Q_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(W2) 50-77 BETACHAIN PRECURSOR PHB2S_HUMAN HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, SBBETA 16-43 CHAIN (FRAGMENT). PHBG1_HUMAN HEPARIN-BINDING GROWTH FACTORPRECURSOR 1 (HBGF-1) 102-129 (ACIDIC FIBROBLAST PHBG3_HUMAN INT-2PROTO-ONCOGENE PROTEIN PRECURSOR (HBGF-3). 61-91 PHBG6_HUMAN FIBROBLASTGROWTH FACTOR-6 PRECURSOR (FGF-6) 41-75 159-186 (HBGF-6) (HST-2).PHBI_HUMAN P59 PROTEIN (HSP BINDING IMMUNOPHILIN) (HBI) 264-312(POSSIBLE PEPTIDYL-PROLYL PHEM4_HUMAN UROPORPHYRINOGEN-III SYNTHASE (EC4.2.1.75)  74-118 (UROPORPHYRINOGEN-III PHEP2_HUMAN HEPARIN COFACTOR IIPRECURSOR (HC-II) (PROTEASE 169-196 INHIBITOR LEUSERPIN 2) PHEPS_HUMANSERIN PROTEASE HEPSIN (EC 3.4.21.-). 22-49 PHEXA_HUMANBETA-HEXOSAMINIDASE ALPHA CHAIN PRECURSOR 356-383 (EC 3.2.1.52)(N-ACETYL- PHEXB_HUMAN BETA-HEXOSAMINIDASE BETA CHAIN PRECURSOR 388-415(EC 3.2.1.52) (N-ACETYL-BETA PHMX1_HUMAN HOMEOBOX PROTEIN MSX-1 (HOX-7).178-212 PHNFA_HUMAN HEPATOCYTE NUCLEAR FACTOR 1-ALPHA (HNF-1A) (LIVER 2-29 SPECIFIC PHO1_HUMAN HEME OXYGENASE 1 (EC 1.14.99.3) (HO-1).197-224 PHPPD_HUMAN 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (EC 1.13.11.27)306-333 (4HPPD). PHRX_HUMAN ZINC FINGER PROTEIN HRX. 521-548 914-9741637-1666 2215-2286 2289-2316 3317-3344 3448-3475 PHS1_HUMANHEMATOPOIETIC LINEAGE CELL SPECIFIC PROTEIN. 43-70 PHS9A_HUMAN HEATSHOCK PROTEIN HSP 90-ALPHA (HSP 86). 443-470 640-674 PHSER_HUMANHEAT-STABLE ENTEROTOXIN RECEPTOR PRECURSOR (GC-C) 511-545 (INTESTINALPHSF1_HUMAN HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT SHOCK 113-140168-209 TRANSCRIPTION FACTOR. PHSF2_HUMAN HEAT SHOCK FACTOR PROTEIN 2(HSF 2) (HEAT SHOCK 117-198 TRANSCRIPTION FACTOR. PHV2I_HUMAN IG HEAVYCHAIN PRECURSOR V-II REGION (ARH-77).  67-108 PHV3T_HUMAN IG HEAVY CHAINV-III REGION (GAL). 47-74 PHX11_HUMAN HOMEOBOX PROTEIN HOX-II (TCL-3PROTO-ONOGENE). 262-289 PHXB7_HUMAN HOMEOBOX PROTEIN HOX-B7 (HOX-2C)(HHO.C1). 135-162 PIAPP_HUMAN ISLET AMYLOID POLYPEPTIDE 53-80PIBP3_HUMAN INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 3 183-210PRECURSOR (IGFBP-3) PIC1_HUMAN PLASMA PROTEASE C1 INHIBITOR PRECURSOR(C1 INH). 251-278 PICA2_HUMAN INTERCELLULAR ADHESION MOLECULE-2PRECURSOR (ICAM-2). 57-84 PIDE_HUMAN INSULIN-DEGRADING ENZYME (EC3.4.99.45) (INSULINASE) 474-504 907-941 (INSULIN PIF41_HUMAN EUKARYOTICINITIATION FACTOR 4A-I (EIF-4A-I). 232-259 322-349 PIF4B_HUMAN INTRINSICFACTOR PRECURSOR (IF) (GASTRIC INTRINSIC 149-176 406-433 FACTOR).PIF_HUMAN INHIBIN BETA A CHAIN PRECURSOR (ACTIVIN BETA-A CHAIN) 308-349(ERYTHROID PIHBA_HUMAN INTERLEUKIN-1 ALPHA PRECURSOR (IL-1 ALPHA) 80-107 183-210 (HEMATOPOIETIN-1). PIL1A_HUMAN INTERLEUKIN-1 RECEPTOR,TYPE I PRECURSOR (IL-1R1)  76-110 172-199 (P80). PIL1R_HUMANINTERLEUKIN-1 RECEPTOR, TYPE I PRECURSOR (IL-1R1) 437-467 (P80).PIL1S_HUMAN INTERLEUKIN-1 RECEPTOR, TYPE II PRECURSOR (IL-1R2). 159-186PIL5R_HUMAN INTERLEUKIN-5 RECEPTOR ALPHA CHAIN PRECURSOR  87-114(IL-5R-ALPHA). PIL6_HUMAN INTERLEUKIN-6 PRECURSOR (IL-6) (B-CELLSTIMULATORY 112-139 FACTOR 2) (BSF-2) PINAI_HUMAN INTERFERON ALPHA-1PRECURSOR.  94-121 PINAR_HUMAN INTERFERON ALPHA RECEPTOR PRECURSOR(IFN-ALPHA-REC).  90-117 164-191 300-327 508-535 PINB_HUMAN INTERFERONBETA PRECURSOR (FIBROBLAST).  88-129 PINI1_HUMAN INTERFERON-INDUCED 17KD PROTEIN (CONTAINS:  83-121 INTERFERON-INDUCED 15 KD PINI6_HUMANINTERFERON-INDUCED 56 KD PROTEIN (IFI-56K). 51-78 216-245 393-430PINSR_HUMAN INSULIN RECEPTOR PRECURSOR (EC 2.7.1.112) (IR). 592-619PINVO_HUMAN INVOLUCRIN. 119-146 229-273 326-363 386-450 PIP3K_HUMAN1D-MYO-INOSITOL-TRISPHOSPHATE 3-KINASE A 121-162 (EC 2.7.1.127)(INOSITOL PIPSP_HUMAN PLASMA SERINE PROTEASE (PROTEIN C) INHIBITOR 90-117 206-233 PRECURSOR (PCI) PIRBP_HUMAN INTERPHOTORECEPTORRETINOID-BINDING PROTEIN 670-697 PRECURSOR (IRBP) PIRF2_HUMAN INTERFERONREGULATORY FACTOR 2 (IRF-2). 157-193 PIT5P_HUMAN 75 KDINOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 235-262 PRECURSOR PITA2_HUMANPLATELET MEMBRANE GLYCOPROTEIN IA PRECURSOR (GPIA) 579-606 900-927(COLLAGEN RECEPTO PITA5_HUMAN FIBRONECTIN RECEPTOR ALPHA SUBUNITPRECURSOR 250-284 657-695 765-792 (INTEGRIN ALPHA-F) PITA6_HUMANINTEGRIN ALPHA-6 PRECURSOR (VLA-6) (INTEGRIN 884-911 944-974 ALPHA-E)(CD49F). PITAL_HUMAN LEUKOCYTE ADHESION GLYCOPROTEIN LFA-1 ALPHA CHAIN256-283 310-341 795-822 PRECURSOR (LEUKOC PITAM_HUMAN CELL SURFACEGLYCOPROTEIN MAC-1 ALPHA SUBUNIT 1044-1078 PRECURSOR (CR-3 ALPHAPITAV_HUMAN VITRONECTIN RECEPTOR ALPHA SUBUNIT PRECURSOR 230-264(INTEGRIN ALPHA-V) PITB1_HUMAN FIBRONECTIN RECEPTOR BETA SUBUNITPRECURSOR 218-245 354-399 (INTEGRIN BETA-1) (CD29) PITB2_HUMAN CELLSURFACE ADHESION GLYCOPROTEINS LFA-1, CR3 AND 339-366 705-732 P150,95,BETA- PITB3_HUMAN PLATELET MEMBRANE GLYCOPROTEIN IIIA PRECURSOR 324-351(GPIIIA) (INTEGRIN BETA- PITB4_HUMAN INTEGRIN BETA-4 SUBUNIT PRECURSOR(GP150). 342-369 PITB5_HUMAN INTEGRIN BETA-5 SUBUNIT PRECURSOR. 724-751PITB6_HUMAN INTEGRIN BETA-6 SUBUNIT PRECURSOR. 311-338 352-393PITB8_HUMAN INTEGRIN BETA-8 SUBUNIT PRECURSOR. 362-399 696-737PITI2_HUMAN INTER-ALPHA-TRYPSIN INHIBITOR COMPLEX COMPONENT II 134-161425-452 772-818 PRECURSOR PK1CJ_HUMAN KERATIN, TYPE I CYTOSKELETAL 10(CYTOKERATIN 10). 154-187 196-227 337-399 428-462 (K10) PK1CM_HUMANKERATIN, TYPE I CYTOSKELETAL 13 (CYTOKERATIN 13). 112-142 (K13)PK1CN_HUMAN KERATIN, TYPE I CYTOSKELETAL 14 (CYTOKERATIN 14). 122-152306-335 393-424 (K14) PK1CO_HUMAN KERATIN, TYPE I CYTOSKELETAL 15(CYTOKERATIN 15). 113-143 (K15) PK1CP_HUMAN KERATIN, TYPE I CYTOSKELETAL16 (CYTOKERATIN 16). 308-339 (K16) PK1CQ_HUMAN KERATIN, TYPE ICYTOSKELETAL 17 (CYTOKERATIN 17). 122-152 302-346 393-431 (K17)PK1CR_HUMAN KERATIN, TYPE I CYTOSKELETAL 18 (CYTOKERATIN 18).  87-114251-298 337-385 (K18) PK1CS_HUMAN KERATIN, TYPE I CYTOSKELETAL 19(CYTOKERATIN 19).  88-118 317-362 370-397 (K19). PK2C1_HUMAN KERATIN,TYPE I CYTOSKELETAL 1 (CYTOKERATIN 1) (K1) 196-226 346-384 390-467(CYTOSKELETAL 67 PK2C2_HUMAN KERATIN, TYPE II CYTOSKELETAL 65 KD.215-248 364-405 461-488 PK2C4_HUMAN KERATIN, TYPE II CYTOSKELETAL 4(CYTOKERATIN 4) (K4) 42-73 126-153 189-248 (FRAGMENT). PK2C5_HUMANKERATIN, TYPE II CYTOSKELETAL 5 (CYTOKERATIN 5) (K5) 185-246 332-373 (58KD PK2C6_HUMAN KERATIN, TYPE II CYTOSKELETAL 6 (CYTOKERATIN 6) 178-239325-366 422-449 (K6B KERATIN). PK2C8_HUMAN KERATIN, TYPE II CYTOSKELETAL8 (CYTOKERATIN 8) (K8) 140-167 PK2CA_HUMAN KERATIN, TYPE II CYTOSKELETAL56 KD (K6A KERATIN)  7-34 120-161 217-244 (FRAGMENT). PK6PF_HUMAN6-PHOSPHOFRUCTOKINASE, MUSCLE TYPE (EC 2.7.1.11) 140-167(PHOSPHOFRUCTOKINASE PK6PL_HUMAN 6-PHOSPHOFRUCTOKINASE, LIVER TYPE (EC2.7.1.11) 49-80 128-159 (PHOSPHOFRUCTOKINASE PKABL_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN KINASE ABL 498-525 (EC 2.7.1.112) (P150) PKAC_HUMAN IGKAPPA CHAIN C REGION. 37-85 PKALM_HUMAN KALLMANN SYNDROME PROTEINPRECURSOR (ADHESION 380-414 MOLECULE-LIKE X-LINK PKAP0_HUMANCAMP-DEPENDENT PROTEIN KINASE TYPE I-ALPHA 179-206 REGULATORY CHAINPKAP1_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE I-BETA 177-204 REGULATORYCHAIN PKAP2_HUMAN CAMP-DEPENDENT PROTEIN KINASE TYPE II-ALPHA 175-202290-317 REGULATORY CHAIN PKBF1_HUMAN NUCLEAR FACTOR KAPPA-B SUBUNIT-1(NF-KAPPA-B P105 529-570 SUBUNIT) PKCRB_HUMAN CREATINE KINASE, B CHAIN(EC 2.7.3.2). 301-328 PKECK_HUMAN TYROSINE PROTEIN-KINASE ECK PRECURSOR(EC 2.7.1.112) 466-493 (EPITHELIAL CELL PKFER_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN KINASE FER 219-246 564-591 (EC 2.7.1.112) (P94-FER)PKFES_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FES/FPS 101-145295-322 (EC 2.7.1.112) (C-FES) PKFLT_HUMAN RECEPTOR-RELATED TYROSINEKINASE FLT PRECURSOR 208-235 319-353 (EC 2.7.1.112). PKFMS_HUMANMACROPHAGE COLONY STIMULATING FACTOR I RECEPTOR 293-320 PRECURSOR(CSF-1-R) PKFYN_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE FYN 199-233(EC 2.7.1.112) (P59-FYN) PKGPB_HUMAN CGMP-DEPENDENT PROTEIN KINASE, BETAISOZYME (CGK) 17-54 (EC 2.7.1.37). PKHEK_HUMAN TYROSINE KINASE HEKRECEPTOR PRECURSOR (EC 2.7.1.112) 646-673 PKINH_HUMAN KINESIN HEAVYCHAIN. 125-155 425-452 471-542 633-680 689-716 872-899 PKKIT_HUMAN KITPROTO-ONCOGENE TYROSINE KINASE PRECURSOR 235-263 (EC 2.7.1.112)PKMET_HUMAN HEPATOCYTE GROWTH FACTOR RECEPTOR PRECURSOR 898-925 (METPROTO-ONCOGENE PHNH_HUMAN KININOGEN, HMW PRECURSOR (ALPHA-2-THIOLPROTEINASE 505-532 INHIBITOR) PKP58_HUMAN GALACTOSYLTRANSFERASEASSOCICATED PROTEIN KINASE  81-108 P58/GTA (EC 2.7.1.-) PKP68_HUMANINTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED 149-179 191-225285-312 PROTEIN KINASE PKP78_HUMAN PUTATIVE SERINE/THREONINE-PROTEINKINASE P78 582-609 (EC 2.7.1.-). PKPCL_HUMAN PROTEIN KINASE C, ETA TYPE(EC 2.7.1.-) (NPKC-ETA) 318-345 (PKC-L). PKPT1_HUMANSERINE/THREONINE-PROTEIN KINASE PCTAIRE-1 (EC 2.7.1-). 149-176 209-253PKPY1_HUMAN PYRUVATE KINASE, M1 (MUSCLE) ISOZYME (EC 2.7.1.40) 243-289(CYTOSOLIC THYROID PKPY2_HUMAN PYRUVATE KINASE, M2 (ISOZYME) (EC2.7.1.40). 243-289 PKPYR_HUMAN PYRUVATE KINASE, ISOZYME R (EC 2.7.1.40). 2-29 PKRET_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RET 183-217 (EC2.7.1.112). PKROS_HUMAN ROS PROTO-ONCOGENE TYROSINE KINASE (EC2.7.1.112) 157-203 (FRAGMENT). PKSRC_HUMAN PROTO-ONCOGENETYROSINE-PROTEIN KINASE SRC 143-170 (EC 2.7.1.112) (P60-SRC) PKU7_HUMANLUPUS KU AUTOANTIGEN PROTEIN P70 (70 KD SUBUNIT OF 235-279 KU ANTIGEN).PKU86_HUMAN LUPUS KU AUTOANTIGEN PROTEIN P86 (86 KD SUBUNIT OF 258-292KU ANTIGEN). PKYES_HUMAN PROTO-ONCOGENE TYROSINE-PROTEIN KINASE YES209-243 (EC 2.7.1.112) (P61-YES) PLAM1_HUMAN LAMIN B1. 32-66 117-144152-193 214-241 397-424 480-507 510-539 PLAMA_HUMAN LAMIN A (70 KDLAMIN). 32-88 114-165 292-343 PLAMC_HUMAN LAMIN C. 32-88 114-165 292-343PLAR_HUMAN LAR PROTEIN PRECURSOR (LEUKOCYTE ANTIGEN RELATED) 935-969 (EC3.1.3.48). PLA_HUMAN LUPUS LA PROTEIN (SJOGREN SYNDROME TYPE B ANTIGEN191-222 295-342 (SS-B)) PLCAT_HUMAN PHOSPHATIDYLCHOLINE-STEROLACYLTRANSFERASE 131-158 PRECURSOR (EC 2.3.1.43) PLDHH_HUMAN L-LACTATEDEHYDROGENASE H CHAIN (EC 1.1.1.27)  81-108 302-329 (LDH-B). PLDHM_HUMANL-LACTATE DEHYDROGENASE M CHAIN (EC 1.1.1.27) 225-252 (LDH-A).PLDLR_HUMAN LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR. 483-510PLECH_HUMAN ASIALOGLYCOPROTEIN RECEPTOR 1 (HEPATIC LECTIN H1) 62-96(ASGPR). PLEM3_HUMAN P-SELECTIN PRECURSOR (GRANULE MEMBRANE PROTEIN 140)32-59  87-116 (GMP-140) (PADGEM) PLGUL_HUMAN LACTOYLGLUTATHIONE LYASE(EC 4.4.1.5)  83-117 (METHYLGLYOXALASE) PLIF_HUMAN LEUKAEMIA INHIBITORYFACTOR PRECURSOR (LIF)  95-122 (DIFFERENTIATION- PLIN1_HUMAN LINE-1REVERSE TRANSCRIPTASE HOMOLOG. 152-179 232-263 298-358 671-698 874-9011036-1066 PLIPG_HUMAN TRIACYLGLYCEROL LIPASE PRECURSOR (EC 3.1.1.3)158-185 (LIPASE, GASTRIC). PLIPS_HUMAN HORMONE SENSITIVE LIPASE (EC3.1.1.-) (HSL). 305-332 PLKHA_HUMAN LEUKOTRIENE A-4 HYDROLASE (EC3.3.2.6) (LTA-4 42-83 290-324 HYDROLASE) (LEUKOTRIENE PLMA_HUMAN LAMININA CHAIN PRECURSOR. 1318-1345 1741-1771 1785-1812 1824-1851 1884-19211965-1999 2026-2059 2091-2118 PLMB1_HUMAN LAMININ B1 CHAIN PRECURSOR.1267-1314 1364-1394 1597-1631 1651-1714 1722-1781 PLMB2_HUMAN LAMININ B2CHAIN PRECURSOR. 1103-1135 1513-1547 PLMP2_HUMAN LYSOSOME-ASSOCIATEDMEMBRANE GLYCOPROTEIN 2 155-182 PRECURSOR (LAMP-2). PLOX2_HUMANARACHIDONATE 12-LIPOXYGENASE (EC 1.13.11.31) 341-368 (12-LOX).PLOX5_HUMAN ARACHIDONATE 5-LIPOXYGENASE (EC 1.13.11.34) 50-87(5-LIPOXYGENASE) (5-LO). PLPH_HUMAN LACTASE-PHLORIZIN HYDROLASEPRECURSOR (EC 3.2.1.108) 776-803 (EC 3.2.1.62) PLRPB_HUMANPROTEIN-TYROSINE PHOSPHATASE BETA PRECURSOR 140-167 589-637 (EC3.1.3.48) (PTP-BETA). PLRPG_HUMAN PROTEIN-TYROSINE PHOSPHATASE GAMMAPRECURSOR 1081-1108 (EC 3.1.3.48) PLRPZ_HUMAN PROTEIN-TYROSINEPHOSPHATASE ZETA PRECURSOR 553-587 1024-1051 1973-2000 (EC 3.1.3.48)(PTP-ZETA). PLSHR_HUMAN LUTROPIN-CHORIOGONALDOTROPIC HORMONE RECEPTOR 66-114 448-480 PRECURSOR (LH/CG-R) PLV2B_HUMAN IG LAMBDA CHAIN V-IIREGION (NEI). 61-88 PLYAG_HUMAN LYSOSOMAL ALPHA-GLUCOSIDASE PRECURSOR(EC 3.2.1.20) 885-912 (ACID MALTASE). PM2OM_HUMAN MITOCHONDRIAL2-OXOGLUTARATE/MALATE CARRIER PROTEIN 50-77 (OGCP). PMAC2_HUMANGALACTOSE-SPECIFIC LECTIN (MAC-2 ANTIGEN) 219-246 (IGE-BINDING PROTEIN)(35 KD PMAN9_HUMAN MAN(9)-ALPHA-MANNOSIDASE (EC 3.2.1.-). 414-441PMANA_HUMAN MANNOSE-6-PHOSPHATE ISOMERASE (EC 5.3.1.8) 60-87(PHOSPHOMANNOSE ISOMERASE) PMANR_HUMAN MACROPHAGE MANNOSE RECEPTORPRECURSOR 248-284 1147-1182 PMAP2_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 2(FRAGMENT). 434-478 PMAP4_HUMAN MICROTUBULE-ASSOCIATED PROTEIN 4.408-449 PMAX_HUMAN MAX PROTEIN. 117-144 PMDM2_HUMAN MDM2 PROTEIN(P53-ASSOCIATED PROTEIN). 235-288 PMDR1_HUMAN MULTIDRUG RESISTANCEPROTEIN 1 (P-GLYCOPROTEIN 1). 561-595 PMERL_HUMAN MERLIN (SCHWANNOMIN).377-407 532-566 PMERO_HUMAN MEROSIN HEAVY CHAIN (LAMININ CHAIN A2)(FRAGMENT).  71-105 139-173 431-458 791-818 PMGMT_HUMANMETHYLATED-DNA-PROTEIN-CYSTEINE METHYLTRANSFERASE  91-118 (EC 2.1.1.63)(6-O- PMKLP_HUMAN MITOTIC KINESIN-LIKE PROTEIN-1. 207-234 319-346510-537 549-608 PMLCH_HUMAN MELANIN-CONCENTRATING HORMONE PRECURSOR. 8-35 PMLK1_HUMAN MIXED LINEAGE KINASE 1 (EC 2.7.1.-) (FRAGMENT).130-157 321-348 PMMSA_HUMAN METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE393-420 PMOES_HUMAN MOESIN (MEMBRANE-ORGANIZING EXTENSION SPIKEPROTEIN). 119-146 351-403 PMPCP_HUMAN MITOCHONDRIAL PHOSPHATE CARRIERPROTEIN PRECURSOR. 286-313 PMPI3_HUMAN M-PHASE INDUCER PHOSPHATASE 3 (EC3.1.3.48). 72-99 PMPKK_HUMAN DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEINKINASE 19-50 KINASE (EC 2.7.1.-) PMPRI_HUMAN CATION-INDEPENDENTMANNOSE-6-PHOSPHATE RECEPTOR 1569-1596 2437-2478 PRECURSOR (CI MAN-6-PMRP_HUMAN MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN. 396-423 507-548PMSHR_HUMAN MELANOCYTE STIMULATING HORMONE RECEPTOR (MSH-R) 38-65(MELANOTROPIN PMSRE_HUMAN MACROPHAGE SCAVENGER RECEPTOR TYPES I AND II173-204 230-260 (MACROPHAGE ACETYLATED PMTDM_HUMAN DNA(CYTOSINE-5)-METHYLTRANSFERASE (EC 2.1.1.37) 387-414 601-628 (DNAPMTF1_HUMAN MITOCHONDRIAL TRNASCRIPTION FACTOR 1 PRECURSOR 181-212(MTTF1). PMUTA_HUMAN METHYLMALONYL-COA MUTASE PRECURSOR (EC 5.4.99.2)468-519 (MCM) PMX1_HUMAN INTERFERON-REGULATED RESISTANCE GTP-BINDINGPROTEIN 108-150 MXA (INTERFERON- PMX2_HUMAN INTERFERON-REGULATEDRESISTANCE GTP-BINDING PROTEIN 451-489 670-697 MXB (P78 RELATEDPMYBA_HUMA MYB-RELATED PROTEIN A (FRAGMENT). 619-646 PMYBB_HUMANMYB-RELATED PROTEIN B.  87-117 PMYCN_HUMA N-MYC PROTO-ONCOGENE PROTEIN.263-300 413-461 PMYC_HUMAN MYC PROTO-ONCOGENE PROTEIN. 393-422PMYF4_HUMAN MYOGENIC FACTOR MYF-4 (MYOGENIN). 119-146 PMYF5_HUMANMYOGENIC FACTOR MYF-5. 121-148 PMYP2_HUMAN MYOGENIC P2 PROTEIN.  70-110PMYPR_HUMAN MYELIN PROTEOLIPID PROTEIN (PLP) (LIPOPHILIN) 43-70(CONTAINS: MYELIN PMYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHAISOFORM 38-75  84-111 137-178 236-324 398-435 440-485 (FRAGMENT).PMYSB_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM. 48-75951-981  997-1044 1088-1122 1192-1234 1266-1332 1360-1408 1442-14791488-1532 1541-1582 1640-1681 1683-1710 1801-1838 PMYSE_HUMAN MYOSINHEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC. 46-73 860-903  952-10771119-1146 1193-1235 1267-1340 1364-1411 1483-1597 1641-1675 1707-17341827-1858 PMYSP_HUMAN MYOSIN HEAVY CHAIN, PERINATAL CARDIAC MUSCLE 50-77 95-125 141-188 215-272 403-483 507-552 586-624 685-736 784-818(FRAGMENT) 823-907 946-987 1049-1076 PMYSS_HUMAN MYOSIN HEAVY CHAIN,SKELETAL MUSCLE (FRAGMENT). 133-160 193-280 304-349 423-460 468-526581-608 645-681 743-798 808-835 846-873 PMYT1_HUMAN MYELIN TRANSCRIPTIONFACTOR 1 (MYTI) (FRAGMENT) 640-678 PNACA_HUMAN SODIUM/CALCIUM EXCHANGERPRECURSOR (NA+/CA2+- 492-519 594-621 705-735 EXCHANGE PROTEIN).PNCA2_HUMAN NEURAL CELL ADHESION MOLECULE, PHOSPHATIDYLINOSITOL- 255-282LINKED ISOFORM PNCF1_HUMAN NEUTROPHIL CYTOSOL FACTOR 1 (NCF-47K) (47 KD234-261 310-337 AUTOSOMAL CHRONIC PNCF2_HUMAN NEUTROPHIL NADPH OXIDASEFACTOR (P67-PHOX).  5-32 PNEFA_HUMAN DNA-BINDING PROTEIN NEFA PRECURSOR.50-77  82-112 343-395 PNEP_HUMAN NEPRILYSIN (EC 3.4.24.11) (NEUTRALENDOPEPTIDASE) 170-216 644-671 (NEP) PNF1_HUMAN NEUROFIBROMIN(NEUROFIBROMATOSIS-RELATED PROTEIN 1145-1172 1388-1422 1639-1666 NF-1)(FRAGMENT). PNFH_HUMAN NEUROFILAMENT TRIPLET H PROTEIN (200 KD  91-128431-490 NEUROFILAMENT PROTEIN) (NF-H). PNFL_HUMAN NEUROFILAMENT TRIPLETL PROTEIN (68 KD NEUROFILAMENT  92-126 441-468 PROTEIN) (NF-L).PNFM_HUMAN NEUROFILAMENT TRIPLET M PROTEIN (160 KD NEUROFILAMENT 101-141164-194 215-280 315-372 737-764 794-826 872-913 PROTEIN) (NF-M).PNK1R_HUMAN SUBSTANCE-P RECEPTOR (SPR) (NK-1 RECEPTOR) (NK-1R). 338-365PNK4_HUMAN NATURAL KILLER CELLS PROTEIN 4 PRECURSOR. 166-193 PNKCR_HUMANNK-TUMOR RECOGNITION PROTEIN (NATURAL-KILLER CELLS 187-214 448-475559-599 701-742 816-843 1080-1133 CYCLOPHILIN- PNKGA_HUMAN NKG2-A ANDNKG2-B TYPE II INTEGRAL MEMBRANE 28-55 PROTEINS. PNOS1_HUMANNITRIC-OXIDE SYNTHASE, BRAIN (EC 1.14.13.39) (NOS, 389-416 1116-11461292-1319 TYPE I). PNOS3_HUMAN NITRIC-OXIDE SYNTHASE, ENDOTHELIAL (EC1.14.13.39) 389-416 (EC-NOS) (NOS, PNTGI_HUMAN SODIUM- ANDCHLORIDE-DEPENDENT GABA TRANSPORTER 1. 131-158 PNTR_HUMAN NEUROTENSINRECEPTOR (NT-R). 57-84 PNTSE_HUMAN SODIUM DEPENDENT SEROTONINTRANSPORTER (5HT 71-98 TRANSPORTER) (5HTT) PNTTA_HUMAN SODIUM- ANDCHLORIDE-DEPENDENT TAURINE TRANSPORTER. 120-147 PNU2M_HUMANNADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2 (EC 1.6.5.3). 202-240 PNU4M_HUMANNADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 (EC 1.6.5.3). 164-191 372-399PNUBN_HUMAN NUCLEOBINDIN PRECURSOR. 46-73 360-387 PNUCL_HUMAN NUCLEOLIN(PROTEIN C23). 462-508 PNY3R_HUMAN PUTATIVE NEUROPEPTIDE Y RECEPTOR TYPE3 (NPY3-R) 115-142 (FB22) (NPYRL) POAT_HUMAN ORNITHINE AMINOTRANSFERASEPRECURSOR (EC 2.6.1.13)  98-128 (ORNITHINE-OXO- POC3A_HUMANOCTAMER-BINDING TRANSCRIPTION FACTOR 3A (OCT-3A). 139-173 POC3B_HUMANOCTAMER-BINDING TRANSCRIPTION FACTOR 3B (OCT-3B). 37-78 POCRL_HUMANLOWE'S OCULOCEREBRORENAL SYNDROME PROTEIN. 704-735 PODB2_HUMAN LIPOAMIDEACYLTRANSFERASE COMPONENT (E2) PRECURSOR 100-127 375-402 OFBRANCHED-CHAI PODP2_HUMAN DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT(E2) 72-99 OF PYRUVATE POMGP_HUMAN OLIGODENDROCYTE-MYELIN GLYCOPROTEINPRECURSOR 53-80 (OMG). POPSB_HUMAN BLUE-SENSITIVE OPSIN (BLUE CONEPHOTORECEPTOR 220-247 PIGMENT). POPSG_HUMAN GREEN-SENSITIVE OPSIN (GREENCONE PHOTORECEPTOR  90-117 239-266 PIGMENT). POPSR_HUMAN RED-SENSITIVEOPSIN (RED CONE PHOTORECEPTOR PIGMENT).  90-117 239-266 POSTP_HUMANOSTEOPONTIN PRECURSOR (BONE SIALOPROTEIN 1) 239-266 (URINARY STONEPROTEIN) POTC_HUMAN ORNITHINE CARBAMOYLTRANSFERASE PERCURSOR (EC2.1.3.3). 170-204 POTNC_HUMAN OSTEONECTIN PRECURSOR (BASEMENT MEMBRANEPROTEIN 173-207 BM-40). POXYB_HUMAN OXYSTEROL-BINDING PROTEIN.  89-123190-217 290-317 577-604 POXYR_HUMAN OXYTOCIN RECEPTOR (OT-R). 350-377PP107_HUMAN RETINOBLASTOMA-ASSOCIATED PROTEIN-LIKE 107 KD 159-186422-449 HOMOLOG (P107) PP1DP_HUMAN DNA POLYMERASE ALPHAHOLOENZYME-ASSOCIATED 19-60 637-664 PROTEIN P1. PP47_HUMAN PLECKSTRIN(P47). 298-325 PP4HA_HUMAN PROLYL 4-HYDROXYLASE ALPHA SUBUNIT PRECURSOR29-69 191-218 (EC 1.14.11.2) PP60_HUMAN MITOCHONDRIAL MATRIX PROTEIN P1PRECURSOR (P60 72-99 271-298 361-407 LYMPHOCYTE PROTEIN) PP85A_HUMANPHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA 12-39 428-476 586-613688-715 SUBUNIT (P13-KINASE PPAP1_HUMAN PANCREATITIS ASSOCIATED PROTEIN1 PRECURSOR.  77-104 PPAX5_HUMAN PAIRED BOX PROTEIN PAX-5 (B-CELLSPECIFIC 157-187 TRANSCRIPTION FACTOR) PPDGA_HUMAN PLATELET-DERIVEDGROWTH FACTOR, A CHAIN PRECURSOR 38-65 (PDGF A-CHAIN) PPEC1_HUMANPLATELET ENDOTHELIAL CELL ADHESION MOLECULE 685-719 PRECURSOR (PECAM-1)PPENK_HUMAN PROENKEPHALIN A PRECURSOR. 142-176 PPERE_HUMAN EOSINOPHILPEROXIDASE PRECURSOR (EC 1.11.1.7) (EPO) 308-335 (FRAGMENT) PPERF_HUMANPERFORIN 1 PRECURSOR (P1) (LYMPHOCYTE PORE FORMING 411-438 PROTEIN)(PFP) PPF4L_HUMAN PLATELET BASIC PROTEIN PRECURSOR (PBP) (CONTAINS:21-55 CONNECTIVE-TISSUE PPGCA_HUMAN CARTILAGE-SPECIFIC PROTEOGLYCAN COREPROTEIN  73-100 PRECURSOR (CSPCP) PPGCS_HUMAN LARGE FIBROBLASTPROTEOGLYCAN PRECURSOR (VERSICAN) 64-98 1390-1417 1553-1580 (CHONDROITINPPGDH_HUMAN 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE (NAD(+))  87-118 (EC1.1.1.141) (PGDH) PPGDR_HUMAN BETA PLATELET-DERIVED GROWTH FACTORRECEPTOR 294-321 354-384 465-495 PRECURSOR (EC 2.7.1.112). PPGDS_HUMANALPHA PLATELET-DERIVED GROWTH FACTOR RECEPTOR 64-94 347-395 461-488524-551  986-1058 PRECURSOR PPGHS_HUMAN PROSTAGLANDIN G/H SYNTHASEPRECURSOR (EC 1.14.99.1) 331-358 (CYCLOOXYGENSE) PPGS1_HUMANBONE/CARTILAGE PROTEOGLYCAN I PRECURSOR (BIGLYCAN) 100-127 (PG-S1)PPH4H_HUMAN PHENYLALANINE-4-HYDROXYLASE (EC 1.14.16.1) (PAH) 239-266(PHE-4- PPHB_HUMAN PROHIBITIN. 41-68 PPHOS_HUMAN PHOSDUCIN (33 KDPHOTOTRANSDUCING PROTEIN) (MEKA 184-225 PROTEIN). PPHS1_HUMAN GLYCOGENPHOSPHORYLASE, LIVER FORM (EC 2.4.1.1). 116-143 PPHS2_HUMAN GLYCOGENPHOSPHORYLASE, MUSCLE FORM (EC 2.4.1.1). 532-559 PPHS3_HUMAN GLYCOGENPHOSPHORYLASE, BRAIN FORM (EC 2.4.1.1). 533-560 PPIP4_HUMAN1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 908-935 PHOSPHODIESTERASE BETA 2PPIP5_HUMAN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 142-169 239-266PHOSPHODIESTERASE GAMMA 2 PPLAK_HUMAN PLAKOGLOBIN (DESMOPLAKIN III)373-400 PPLSL_HUMAN L-PLASTIN (FIMBRIN). 507-534 PPLST_HUMAN T-PLASTIN(FIMBRIN). 510-561 PPM22_HUMAN PERIPHERAL MYELIN PROTEIN 22 (PMP-22) 3-33 PPMGB_HUMAN PHOSPHOGLYCERATE MUTASE, BRAIN FORM (EC 5.4.2.1) 81-111 (PGAM-B) (EC 5.4.2.4) PPMGM_HUMA PHOSPHOGLYCERATE MUTASE, MUSCLEFORM (EC 5.4.2.1)  81-115 (PGAM-M) PPML1_HUMAN PROBABLE TRANSCRIPTIONFACTOR PML-1. 551-585 PPMLX_HUMAN PROBABLE TRANSCRIPTION FACTOR PML-X551-585 PPMSC_HUMAN AUTOANTIGEN PM-SCL. 103-130 PPOGA_HUMAN DNA-BINDINGPROTEIN PO-GA. 14-51 182-209 610-637 667-699 PPOL1_HUMANRETROVIRUS-RELATED POL POLYPROTEIN (REVERSE 774-804 TRANSCRIPTASEPPOL2_HUMAN RETROVIRUS-RELATED POL POLYPROTEIN (FRAGMENT).  78-138171-205 PPOR1_HUMAN OUTER MITOCHONDRIAL MEMBRANE PROTEIN PORIN 33-76189-216 (VOLTAGE-DEPENDENT ANIO PPPAP_HUMAN PROSTATIC ACID PHOSPHATASEPRECURSOR (EC 3.1.3.2). 235-269 PPPAS_HUMAN RED CELL ACID PHOPHATASE 1,ISOZYME S (EC 3.1.3.2) 26-53 (ACP1). PPPOL_HUMAN NAD(+)ADP-RIBOSYLTRANSFERASE (EC 2.4.2.30) 699-729  972-1003 (POLY(ADP-RIBOSE)PPRC2_HUMAN PROTEASOME COMPONENT C2 (EC 3.4.99.46) (MACROPAIN 39-66SUBUNIT C2) PPRC3_HUMAN PROTEASOME COMPONENT C3 (EC 3.4.99.46)(MACROPAIN 34-61 SUBUNIT C3) PPRC9_HUMAN PROTEASOME COMPONENT C9 (EC3.4.99.46) (MACROPAIN 203-261 SUBUNIT C9) PPRGR_HUMAN PROGESTERONERECEPTOR (PR) (FORMS A AND B). 846-890 PPRTS_HUMAN VITAMIN K-DEPENDENTPROTEIN S (BLOOD CLOTTING) 337-371 PRECURSOR. PPRTZ_HUMAN VITAMINK-DEPENDENT PROTEIN Z PRECURSOR. 29-56 PPSOR_HUMAN PSORIASIN. 65-92PPSPD_HUMAN PULMONARY SURFACTANT-ASSOCIATED PROTEIN D PRECURSOR 224-251(PSP-D) (SP-D). PPTHY_HUMAN PARATHYROID HORMONE PRECURSOR (PARATHYRIN). 86-113 PPTN1_HUMAN PROTEIN-TYROSINE PHOSPHATASE 1B (EC 3.1.3.48)136-177 (PTP-1B). PPTN2_HUMAN T-CELL PROTEIN-TYROSINE PHOSPHATASE (EC3.1.3.48) 59-86 138-178 (TCPTP). PPTN6_HUMAN PROTEIN-TYROSINEPHOSPHATASE 1C (EC 3.1.3.48) 227-261 512-580 (PTP-1C) (HEMATOPOIETICPPTNB_HUMAN PROTEIN-TYROSINE PHOSPHATASE 2C (EC 3.1.3.48) 41-68 218-245(PTP-2C) (PTP-1D) PPTNC_HUMAN PROTEIN-TYROSINE PHOSPHATASE G1 (EC3.1.3.48) 618-645 695-722 (PTPG1). PPTRR_HUMAN PARATHYROIDHORMONE/PARATHYROID HORMONE-RELATED 368-395 PEPTIDE PPTX3_HUMANPENTAXIN-RELATED PROTEIN PTX3 PRECURSOR.  74-101 PPUR2_HUMANPHOSPHORIBOSYLAMINE-GLYCINE LIGASE (EC 6.3.4.13) 803-830 (GARS)(GLYCINAMIDE PPUR6_HUMAN MULTIFUNCTIONAL PROTEIN ADE2H1 391-418(PHOSPHORIBOSYLAMINOIMIDAZOLE- PPUR8_HUMAN ADENYLOSUCCINATE LYASE (EC4.3.2.2) 204-231 (ADENYLOSUCCINASE) (ASL). PPYR5_HUMAN URIDINE5′-MONOPHOSPHATE SYNTHASE (UMP 120-150 SYNTHASE) (OROTATE PPYRG_HUMANCTP SYNTHASE (EC 6.3.4.2) (UTP-AMMONIA LIGASE) (CTP  86-113 300-334SYNTHETASE). PPZP_HUMAN PREGNANCY ZONE PROTEIN PRECURSOR. 315-354 990-1024 1162-1189 1405-1432 PRA74_HUMAN TRANSCRIPTION FACTOR IIF,ALPHA SUBUNIT (TFIIF, 474-501 ALPHA SUBUNIT) PRAB4_HUMAN RAS-RELATEDPROTEIN RAB-4. 38-65 PRAB6_HUMAN RAS-RELATED PROTEIN RAB-6. 123-150PRADI_HUMAN RADIXIN. 308-335 414-463 510-537 PRB11_HUMAN RAS-RELATEDPROTEIN RAB-11 (24KG) (YL8). 151-178 PRBB3_HUMAN RETINOBLASTOMA BINDINGPROTEIN 3 (RBBP-3) 129-156 161-223 (PRB-BINDING PROTEIN E2F-1)PRDP_HUMAN RD PROTEIN.  9-53 PRENI_HUMAN RENIN PRECURSOR, RENAL (EC3.4.23.15) 136-163 (ANGIOTENSINOGENASE). PREST_HUMAN RESTIN (CYTOPLASMICLINKER PROTEIN-170 ALPHA-2) 190-217 333-370 445-472 571-619 744-771784-852 1023-1050 1088-1139 1157-1184 (CLIP-170). 1216-1306 PRFA1_HUMANREPLICATION PROTEIN A 70 KD DNA-BINDING SUBUNIT 208-235 425-455 (RP-A)(RF-A). PRFP_HUMAN TRANSFORMING PROTEIN (RFP) (RET FINGER PROTEIN).183-217 PRH_HUMAN BLOOD GROUP RH(D) POLYPEPTIDE 361-388 PRIB1_HUMANRIBOPHORIN I PRECURSOR.  81-108 496-530 PRIB2_HUMAN RIBOPHORIN IIPRECURSOR. 142-172 361-388 PRIR1_HUMAN RIBONUCLEOSIDE-DIPHOSPHATEREDUCTASE M1 CHAIN 42-69 370-400 (EC 1.17.4.1) PRL22_HUMAN 60S RIBOSOMALPROTEIN L22 (EPSTEIN-BARR VIRUS SMALL  78-112 RNA ASSOCIATED PRL26_HUMAN60S RIBOSOMAL PROTEIN L26. 55-89 103-137 PRL9_HUMAN 60S ROBOSOMALPROTEIN L9. 146-192 PRLA0_HUMAN 60S ACIDIC ROBOSOMAL PROTEIN P0 (L10E).138-165 PRO5_HUMAN 52 KD RO PROTEIN (SJOGREN SYNDROME TYPE A ANTIGEN190-235 238-265 (SS-A)). PRO6_HUMAN 60 KD RO PROTEIN (SJOGREN SYNDROMETYPE A ANTIGEN 192-245 (SS-A)). PROC_HUMAN HETEROGENEOUS NUCLEARRIBONUCLEOPROTEINS C1/C2 16-43 (HNRNP C1 AND HNRNP PROL_HUMANHETEROGENEOUS RIBONUCLEOPROTEIN L (HRNPL). 501-528 PROU_HUMANHETEROGENEOUS RIBONUCLEOPROTEIN U. 630-657 PRPB1_HUMAN DNA-DIRECTED RNAPOLYMERASE II 215 KD POLYPEPTIDE 269-296 665-720 879-906 1314-13411371-1398 PRPB2_HUMAN DNA-DIRECTED RNA POLYMERASE II 140 KD POLYPEPTIDE626-667 1008-1035 PRPB3_HUMAN DNA-DIRECTED RNA POLYMERASE II 33 KDPOLYPEPTIDE 242-274 PRRXA_HUMAN RETINOIC ACID RECEPTOR RXR-ALPHA.318-352 PRRXB_HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 1. 376-403PRRXC_HUMAN RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 2 396-423PRS12_HUMAN 40S RIBOSOMAL PROTEIN S12 60-87 PRS16_HUMAN 40S RIBOSOMALPROTEIN S16  89-116 PRS25_HUMAN 40S RIBOSOMAL PROTEIN S25. 26-53PRS27_HUMAN 40S RIBOSOMAL PROTEIN S27A. 14-41 PRS7_HUMAN 40S RIBOSOMALPROTEIN S7 (S8)  73-100 PRS8_HUMAN 40S RIBOSOMAL PROTEIN S8 136-163PRTC1_HUMAN RAS-LIKE PROTEIN TC21. 123-150 PRU1A_HUMAN U1 SMALL NUCLEARRIBONUCLEOPROTEIN A (U1 SNRNP A 13-47 PROTEIN) PRU2B_HUMAN U2 SMALLNUCLEAR RIBONUCLEOPROTEIN B″ 17-44 PRYNR_HUMAN RYANODINE RECEPTOR,SKELETAL MUSCLE 154-188 495-522 866-893 2750-2777 2820-2847 3304-33313529-3556 3912-3939 4921-4948 PS10A_HUMAN S-100 PROTEIN, ALPHA CHAIN12-54 PS10B_HUMAN S-100 PROTEIN, BETA CHAIN 14-56 PS10D_HUMAN S-100DPROTEIN. 31-58 PSAHH_HUMAN ADENOSYLHOMOCYSTEINASE (EC 3.3.1.1)(S-ADENOSYL-L- 389-416 HOMOCYSTEINE PSAT1_HUMAN DNA-BINDING PROTEINSATB1. 709-736 PSCCA_HUMAN SQUAMOUS CELL CARCINOMA ANTIGEN (SCCA) 78-105 (PROTEIN T4-A) PSCF_HUMAN STEM CELL FACTOR PRECURSOR (SCF) 74-101 PSEM1_HUMAN SEMENOGELIN I PROTEIN PRECURSOR (SGI) (CONTAINS:64-98 176-226 288-329 334-368 SEMINAL BASIC PSEM2_HUMAN SEMENOGELIN IIPRECURSOR (SGII). 71-98 183-226 304-355 405-439 539-575 PSET_HUMAN SETPROTEIN. 38-65 154-181 PSG1_HUMAN SECRETOGRANIN I PRECURSOR(CHROMOGRANIN B). 144-178 PSG2_HUMAN SECRETOGRANIN II PRECURSOR(CHROMOGRANIN C). 254-281 290-317 534-561 PSIAL_HUMAN BONE SIALOPROTEINII PRECURSOR (BSP II).  84-113 155-193 256-283 PSN2L_HUMAN POSSIBLEGLOBAL TRANSCRIPTION ACTIVATOR SNF2L. 231-258 545-572 PSNOB_HUMANSK1-RELATED ONCOGENE SNON. 414-441 PSPCA_HUMAN SPECTRIN ALPHA CHAIN.193-220 570-621 655-712 1099-1126 1461-1502 1882-1901 1988-20222120-2154 2223-2250 2346-2373 PSPCB_HUMAN SPECTRIN BETA CHAIN,ERYTHROCYTE. 150-177 316-350 486-520 648-675  987-1021 1027-10831287-1324 1347-1374 1834-1861 PSPRE_HUMAN SEPIAPTERIN REDUCTASE (EC1.1.1.153) (SPR).  90-124 PSRF_HUMAN SERUM RESPONSE FACTOR (SRF). 77-104 480-507 PSRPR_HUMAN SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHASUBUNIT  76-110 (SR-ALPHA) PSSR1_HUMAN SOMATOSTATIN RECEPTOR TYPE 1.289-316 PSTHM_HUMAN STATHMIN (PHOSPHOPROTEIN P19) (ONCOPROTEIN P18)47-74 (LEUKEMIA-ASSOCIATED PSUIS_HUMAN SUCRASE-ISOMALTASE, INTESTINAL(EC 3.2.1.48)/ 1748-1775 (EC 3.2.1.10). PSYB1_HUMAN SYNAPTOBREVIN 1.31-67 PSYD2_HUMAN ASPARTYL-TRNA SYNTHETASE ALPHA-2 SUBUNIT 44-71 (EC6.1.1.12) (ASPARTATE- PSYEP_HUMAN MULTIFUNCTIONAL AMINOACYL-TRNASYNTHETASE 174-201 740-771 (CONTAINS: GLUTAMYL-TRN PSYH_HUMANHISTIDYL-TRNA SYNTHETASE (EC 6.1.1.21) (HISTIDINE- 380-442 468-502 TRNALIGASE). PSYT1_HUMAN SYNAPTOTAGMIN I (P65). 140-167 250-277 PSYTC_HUMANTHREONYL-TRNA SYNTHETASE, CYTOPLASMIC (EC 6.1.1.3) 497-524 658-685(THREONINE-TRNA PSYV_HUMAN VALYL-TRNA SYNTHETASE (EC 6.1.1.9)(VALINE-TRNA 230-257 413-440 LIGASE) (VALRS). PSYW_HUMANTRYPTOPHANYL-TRNA SYNTHETASE (EC 6.1.1.2)  93-127 196-223(TRYPTOPHAN-TRNA LIGASE) PT2EB_HUMAN TRANSCRIPTION INITIATION FACTORIIE-BETA CHAIN 34-68 (TFIIE-BETA). PTAP4_HUMAN TRANSCRIPTION FACTOR AP-4(FRAGMENT). 169-196 245-272 PTAPB_HUMAN TRANSCRIPTION FACTOR JUN-B296-323 PTAPD_HUMAN TRANSCRIPTION FACTOR JUN-D. 291-333 PTAU1_HUMANMICROTUBULE-ASSOCIATED PROTEIN TAU 278-305 PTAU2_HUMANMICROTUBULE-ASSOCIATED PROTEIN TAU, FETAL. 211-238 PTCO1_HUMANTRANSCOBALAMIN I PRECURSOR. 201-241 330-357 PTCP1_HUMAN T-COMPLEXPROTEIN 1 (TCP-1). 316-343 PTDT_HUMAN DNA NUCLEOTIDYLEXOTRANSFERASE (EC2.7.7.31) 61-95 (TERMINAL ADDITION ENZYME) PTEK_HUMAN RECEPTORTYROSINE-PROTEIN KINASE TEK PRECURSOR 644-678 969-996 1007-1036 (EC2.7.1.112) (HPK-6). PTF2B_HUMAN TRANSCRIPTION INITIATION FACTOR 11B(FT11B). 135-162 PTFE3_HUMAN TRANSCRIPTION FACTOR E3 (FRAGMENT). 43-70122-149 178-226 PTFS2_HUMAN TRANSCRIPTION ELONGATION FACTOR S-II. 29-56PTF_HUMAN TISSUE FACTOR PRECURSOR (TF) (COAGULATION FACTOR III). 148-175PTGF1_HUMAN TRANSFORMING GROWTH FACTOR BETA 1 PRECURSOR 148-185(TGF-BETA 1). PTGF2_HUMAN TRANSFORMING GROWTH FACTOR BETA 2 PRECURSOR243-270 (TGF-BETA 2) (GLIOBLASTO PTGFA_HUMAN TRANSFORMING GROWTH FACTORALPHA PRECURSOR  87-114 (TGF-ALPHA) (EGF-LIKE TGR PTGLK_HUMANPROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE K 258-285 (EC 2.3.2.13)PTHBS_HUMAN THROMBOSPONDIN PRECURSOR. 110-165 284-314 PTHIK_HUMAN3-KETOACYL-COA THIOLASE PEROXISOMAL PRECURSOR 185-212 (EC 2.3.1.16)(BETA- PTKNB_HUMAN PROTACHYKININ BETA PRECURSOR (CONTAINS: 11-38SUBSTANCE P, NEUROKININ A PTLE1_HUMAN TRANSDUCIN-LIKE ENHANCERPROTEIN 1. 626-653 PTLE2_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 2. 94-125 PTLE4_HUMAN TRANSDUCIN-LIKE ENHANCER PROTEIN 4 (FRAGMENT).304-331 PTOPA_HUMAN DNA TOPOISOMERASE II, ALPHA ISOZYME (EC 5.99.1.3).19-46 503-532 PTOPB_HUMAN DNA TOPOISOMERASE II, BETA ISOZYME (EC5.99.1.3). 35-65 616-647 PTPM3_HUMAN TROPOMYOSIN, FIBROBLAST ISOFORMTM3. 16-74  82-116 PTPMA_HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE.16-43 47-74  82-116 147-174 191-237 243-277 PTPMB_HUMAN TROPOMYOSIN BETACHAIN, SKELETAL MUSCLE.  37-116 193-240 PTPMC_HUMAN TROPOMYOSIN ALPHACHAIN, CARDIAC MUSCLE 16-74  82-116 193-277 PTPMF_HUMAN TROPOMYOSIN,FIBROBLAST AND EPITHELIAL MUSCLE-TYPE  37-116 210-240 243-270 (TM36)(TME1) PTPMG_HUMAN TROPOMYOSIN, FIBROBLAST NON-MUSCLE TYPE (TM30PL).46-80 111-138 158-199 207-234 PTPM1_HUMAN TROPOMYOSIN, CYTOSKELETAL TYPE(TM30NM). 46-80 111-138 172-199 PTPMS_HUMAN TROPOMYOSIN ALPHA CHAIN,SMOOTH MUSCLE (FRAGMENT) 25-59 147-178 PTPP2_HUMAN TRIPEPTIDYL-PEPTIDASEII (EC 3.4.14.10) (TPP II) 153-187 1004-1031 1160-1187 (TRIPEPTIDYLPTPR_HUMAN TPR ONCOGENE (FRAGMENT).  82-147 PTR36_HUMAN TREB36 PROTEIN.18-45 242-269 PTRFR_HUMAN THYROTROPIN-RELEASING HORMONE RECEPTOR (TRH-R)349-383 (THYROLIBERIN PTRIC_HUMAN TROPONIN I, CARDIAC MUSCLE. 36-63PTRKA_HUMAN HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR 66-93 117-148PRECURSOR (EC 2.7.1.112) PTRSR_HUMAN TRANSFERRIN RECEPTOR PROTEIN (TR)(ANTIGEN CD71) 188-215 366-393 (T9) PTSHR_HUMAN THYROTROPIN RECEPTORPRECURSOR (TSH-R).  87-117 420-447 PTTK_HUMAN PROTEIN KINASE TKK (EC2.7.1.-). 170-197 324-359 510-544 549-583 PTYK2_HUMAN NON-RECEPTORTYROSINE-PROTEIN KINASE TYK2 150-177 (EC 2.7.1.112). PUBA1_HUMANUBIQUITIN-ACTIVATING ENZYME E1 (A1S9 PROTEIN). 448-475 PUBF1_HUMANNUCLEOLAR TRANSCRIPTION FACTOR 1 (UPSTREAM BINDING 227-254 FACTOR 1)(UBF-1). PUDP0_HUMAN UDP-GLUCURONOSYLTRANSFERASE PRECURSOR MICROSOMAL227-254 (EC 2.4.1.17) PUFO_HUMAN RECEPTOR TYROSINE-PROTEIN KINASE UFOPRECURSOR 488-522 (EC 2.7.1.112) PUSF1_HUMAN UPSTREAM STIMULATORYFACTOR 1. 251-295 PVATC_HUMAN VACUOLAR ATP SYNTHASE SUBUNIT C (EC3.6.1.34) 47-74 117-147 (V-ATPASE C SUBUNIT). PVIL1_HUMAN VILLIN.338-372 427-461 717-744 PVIME_HUMAN VIMENTIN. 119-146 233-260PVINC_HUMAN VINCULIN. 108-135 PVPRT_HUMAN RETROVIRUS-RELATED PROTEASE(EC 3.4.23.-).  95-134 PWEE1_HUMAN WEE1-LIKE PROTEIN KINASE (EC2.7.1.112). 354-388 PWT1_HUMAN WILMS' TUMOR PROTEIN (WT33). 247-274PXBP1_HUMAN X BOX BINDING PROTEIN-1 (XBP-1) (TREB5 PROTEIN).  97-135PXPAC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-A CELLS 180-211(XERODERMA PIGMENTOSUM PXPCC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-CCELLS 134-168 701-728 (XERODERMA PIGMENTOSUM PXPDC_HUMAN DNA-REPAIRPROTEIN COMPLEMENTING XP-D CELLS 264-291 (XERODERMA PIGMENTOSUMPXPGC_HUMAN DNA-REPAIR PROTEIN COMPLEMENTING XP-G CELLS  83-110 715-7661047-1081 (XERODERMA PIGMENTOSUM PXRCC_HUMAN DNA-REPAIR PROTEIN XRCC1.23-57 PZN10_HUMAN ZINC FINGER PROTEIN 10 (ZINC FINGER PROTEIN KOX1)29-56 (FRAGMENT). PZN40_HUMAN ZINC FINGER PROTEIN 40 (HUMANIMMUNODEFICIENCY 17-62 307-334 1071-1098 1469-1500 2013-2057 2146-2180VIRUS TYPE I ENHANCER- PZN45_HUMAN ZINC FINGER PROTEIN 45 (BRC1744)(FRAGMENT).  3-30 201-228 PZN46_HUMAN ZINC FINGER PROTEIN 46 (ZINCFINGER PROTEIN KUP) 121-149

TABLE X Search Results Summary for PCTLZIP, P1CTLZIP, and P2CTLZIPMotifs PCTLZIP P1CTLZIP P2CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILEPENV_FOAMV 481-496 PENV_BIVO6 434-450 PENV_BIVO6 525-542 PENV_HV1MA438-453 PENV_BIV27 463-479 PENV_BIV27 554-571 PENV_HV1MF 183-198PENV_FOAMV 481-496 864-880 PENV_FENV1 30-47 630-647 PENV_HV1RH 445-460PENV_HV1KB 752-768 PENV_FIVPE 781-798 PENV_HV1SC 186-201 PENV_HV1MA437-453 PENV_FIVSD 779-796 PENV_HV1Z2 123-138 PENV_HV1MF 183-198PENV_FIVT2 780-797 PENV_HV1ZH 438-453 PENV_HV1RH 444-460 PENV_FLVC638-55 624-641 PENV_HV2BE 750-765 PENV_HV1S1 738-754 PENV_FLVGL 605-622PENV_HV2D1 741-756 PENV_HV1SC 186-201 PENV_FLVLB 625-642 PENV_HV2G1741-756 PENV_HV1Z2 123-138 PENV_FLVSA 602-619 PENV_HV2NZ 742-757PENV_HV1Z3 117-133 PENV_FOAMV 710-727 957-974 PENV_HV2RO 751-766PENV_HV1ZH 437-453 PENV_FSVGA 625-642 PENV_HV2SB 743-758 PENV_HV2BE750-765 PENV_FSVGB 605-622 PENV_HV2ST 745-760 PENV_HV2D1 741-756PENV_FSVSM 608-625 PENV_JSRV 104-119 PENV_HV2G1 741-756 PENV_HV1OY123-140 PENV_MMTVB 618-633 PENV_HV2NZ 742-757 PENV_HV1Z2 410-427PENV_MMTVG 618-633 PENV_HV2RO 751-766 PENV_HV1Z3 154-171 PENV_SIVMK139-154 PENV_HV2SB 743-758 PENV_HV2CA 750-767 PENV_SIVML 139-154PENV_HV2ST 745-760 PENV_MCFF 600-617 PHEMA_CVBLY 391-406 PENV_JSRV104-119 541-557 PENV_MCFF3 601-618 PHEMA_CVBM 391-406 PENV_MCFF 397-413PENV_MLVAV 630-647 PHEMA_CVBQ 391-406 PENV_MCFF3 397-413 PENV_MLVCB625-642 PHEMA_CVHOC 391-406 PENV_MLVAV 427-443 PENV_MLVF5 639-656PHEMA_CVMA5 402-417 PENV_MLVCB 422-438 PENV_MLVFF 639-656 PHEMA_CVMS403-418 PENV_MLVHO 423-439 PENV_MLVFP 639-656 PHEMA_INBAA 295-310PENV_MLVMO 426-442 PENV_MLVHO 626-643 PHEMA_INBBE 303-318 PENV_MLVRD424-440 PENV_MLVKI 167-184 PHEMA_INBBO 293-308 PENV_MLVRK 424-440PENV_MLVMO 629-646 PHEMA_INBEN 301-316 PENV_MMTVB 618-633 PENV_MLVRD624-641 PHEMA_INBFU 286-301 PENV_MMTVG 618-633 PENV_MLVRK 624-641PHEMA_INBGL 296-311 PENV_SFV1 864-880 PENV_MSVFB 170-187 PHEMA_INBHK293-308 PENV_SFV3L 861-877 PENV_RMCFV 603-620 PHEMA_INBIB 288-303PENV_SIVGB  93-109 PENV_SFV1 710-727 957-974 PHEMA_INBID 299-314PENV_SIVMK 139-154 802-818 PENV_SFV3L 707-724 954-971 PHEMA_INBLE302-317 PENV_SIVML 139-154 801-817 PENV_SIVM1 766-783 PHEMA_INBMD292-307 PENV_SIVS4 806-822 PENV_SIVMK 765-782 PHEMA_INBME 296-311PENV_SIVSP 810-826 PENV_SIVML 764-781 PHEMA_INBNA 288-303 PHEMA_CDVO36-52 PENV_SIVS4 769-786 PHEMA_INBOR 301-316 PHEMA_CVBLY 391-406PENV_SIVSP 773-790 PHEMA_INBSI 301-316 PHEMA_CVBM 391-406 PENV_SMRVH536-553 PHEMA_INBSJ 296-313 PHEMA_CVBQ 391-406 PENV_SMSAV 42-59PHEMA_INBUS 294-309 PHEMA_CVHOC 391-406 PHEMA_CDVO 36-53 200-217PHEMA_INBVI 296-311 PHEMA_CVMA5 402-417 PHEMA_CVBLY 391-408 PHEMA_INBVK303-318 PHEMA_CVMS 403-418 PHEMA_CVBM 391-408 PHEMA_INBYB 286-301PHEMA_IAAIC 237-253 PHEMA_CVBQ 391-408 PHEMA_MUMPM 133-148 PHEMA_IABAN221-237 PHEMA_CVHOC 391-408 PHEMA_MUMPR 133-148 PHEMA_IABUD 234-250PHEMA_IAAIC 322-339 PHEMA_MUMPS 133-148 PHEMA_IACKA 234-250 PHEMA_IABAN306-323 PHEMA_PI1HW 345-360 PHEMA_IACKG 231-247 PHEMA_IABUD 320-337PHEMA_PI2H 65-80 PHEMA_IACKV 230-246 PHEMA_IACKA 320-337 PHEMA_PI2HT65-80 PHEMA_IADA1 234-250 PHEMA_IACKG 316-333 PHEMA_RINDK 368-383PHEMA_IADA3 237-253 PHEMA_IACKP 302-319 PHEMA_SV5  7-94 PHEMA_IADCZ234-250 PHEMA_IACKQ 302-319 PHEMA_SV5CM  7-94 PHEMA_IADH1 221-237PHEMA_IACKS 319-336 PHEMA_SV5CP  7-94 PHEMA_IADH2 221-237 PHEMA_IACKV315-332 PHEMA_SV5LN  7-94 PHEMA_IADH3 221-237 PHEMA_IADA1 320-337PVENV_DHVI1 42-57 PHEMA_IADH4 221-237 PHEMA_IADA3 322-339 PVFP7_CAPVK 89-104 PHEMA_IADH5 221-237 PHEMA_IADCZ 320-337 PVFUS_VACC6 72-87PHEMA_IADH6 221-237 PHEMA_IADH1 306-323 PVG01_BPP22 242-257 PHEMA_IADH7221-237 PHEMA_IADH2 306-323 PVG01_HSVEB 169-184 PHEMA_IADM2 237-253PHEMA_IADH3 306-323 PVG01_HSVI1 210-225 317-332 PHEMA_IADNZ 234-250PHEMA_IADH4 306-323 PVG06_BFT4 184-199 PHEMA_IAEN6 221-237 PHEMA_IADH6306-323 PVG07_BPT4 885-900 PHEMA_IAEN7 237-253 PHEMA_IADH7 306-323PVG08_HSVI1 134-149 PHEMA_IAFPR 230-246 PHEMA_IADM2 322-339 PVG10_BPPH2183-198 PHEMA_IAHAL 236-252 PHEMA_IADNZ 320-337 PVG10_BPPZA 183-198PHEMA_IAHAR 235-251 PHEMA_IADU3 322-339 PVG10_HSVSA 109-124 PHEMA_IAHC6230-246 PHEMA_IAEN6 306-323 PVG16_BPP1 81-96 PHEMA_IAHC7 230-246PHEMA_IAEN7 322-339 PVG18_BPT4 468-483 PHEMA_IAHCD 230-246 PHEMA_IAFPR315-332 PVG25_BPT4  97-112 PHEMA_IAHDE 230-246 PHEMA_IAGRE 320-337PVG29_HSVI1 20-35 PHEMA_IAHFO 236-252 PHEMA_IAGU2 320-337 PVG30_BPPH811-94 PHEMA_IAHK6 236-252 PHEMA_IAGUA 319-336 PVG36_BPOX2 22-37PHEMA_IAHK7 236-252 PHEMA_IAHAL 321-338 PVG36_HSVSA 108-123 PHEMA_IAHLE230-246 PHEMA_IAHC6 315-332 PVG37_BPT2 1253-1268 PHEMA_IAHLO 230-246PHEMA_IAHC7 315-332 PVG37_HSVI1 284-299 PHEMA_IAHMI 236-252 PHEMA_IAHCD315-332 PVG55_HSVI1 22-37 143-158 PHEMA_IAHNM 236-252 PHEMA_IAHDE315-332 PVG56_HSVI1 268-283 PHEMA_IAHRO 236-252 PHEMA_IAHFO 321-338PVG56_HSVI1 102-117 PHEMA_IAHSA 236-252 PHEMA_IAHK6 321-338 PVG59_HSVI1267-282 PHEMA_IAHSP 230-246 PHEMA_IAHK7 321-338 PVG65_HSVI1 518-533PHEMA_IAHSW 230-246 PHEMA_IAHLE 315-332 PVG9_BPPH2 234-249 PHEMA_IAHTE236-252 PHEMA_IAHLO 315-332 PVG9_BPPZA 234-249 PHEMA_IAHTO 236-252PHEMA_IAHMI 321-338 PVG9_BPV1R 57-72 PHEMA_IAHUR 236-252 PHEMA_IAHNM321-338 PVGF_BPPHX 234-249 PHEMA_IAKIE 235-251 PHEMA_IAHNN 315-332PVGL2_CVBF 264-279 PHEMA_IALEN 235-251 PHEMA_IAHPR 315-332 PVGL2_CFBL9264-279 PHEMA_IAMAA 233-249 PHEMA_IAHRO 321-338 PVGL2_CVBLY 264-279PHEMA_IAMAB 238-254 PHEMA_IAHSA 321-338 PVGL2_CVBM 264-279 PHEMA_IAMAO237-253 PHEMA_IAHSP 315-332 PVGL2_CVBQ 264-279 PHEMA_IAME1 237-253PHEMA_IAHSW 315-332 PVGL2_CVBV 264-279 PHEMA_IAME2 237-253 PHEMA_IAHTE321-338 PVGL2_CVPFS 442-457 PHEMA_IAME6 221-237 PHEMA_IAHTO 321-338PVGL2_CVPPU 440-455 504-519 PHEMA_IAMIN  85-101 231-247 PHEMA_IAHUR321-338 PVGL2_CVPR8 218-233 PHEMA_IANT6 237-253 PHEMA_IAJAP 317-334PVGL2_CVPRM 218-233 PHEMA_IAQU7 221-237 PHEMA_IAMAA 319-336 PVGL2_IBV61056-1071 PHEMA_IARUD 234-250 PHEMA_IAMAB 324-341 PVGL2_IBVB 1055-1070PHEMA_IASE2 234-250 PHEMA_IAMAO 322-339 PVGL2_IBVD2 1056-1071PHEMA_IASH2 234-250 PHEMA_IAME1 322-339 PVGL2_IBVK 1055-1070 PHEMA_IASTA230-246 PHEMA_IAME2 322-339 PVGL2_IBVM 1055-1070 PHEMA_IATAI 235-251PHEMA_IAME6 306-323 PVGLB_HSVSA 701-716 PHEMA_IATKM 234-250 PHEMA_IAMIN316-333 PVGLB_PRVIF 203-216 PHEMA_IATKO 233-249 PHEMA_IANT6 322-339PVGLC_HSVBC 475-490 PHEMA_IATKR 230-246 PHEMA_IAPIL 320-337 PVGLC_HSVE4444-459 PHEMA_IATKW 229-245 PHEMA_IAQU7 306-323 PVGLC_HSVEB 427-442PHEMA_IAUDO 237-253 PHEMA_IARUD 320-337 PVGLC_PRVIF 446-461 PHEMA_IAUSS235-251 PHEMA_IASE2 320-337 PVGLD_HSV11 79-94 PHEMA_IAVI7 238-254PHEMA_IASH2 321-338 PVGLD_HSV2 79-94 PHEMA_IAXIA 235-251 PHEMA_IASTA315-332 PVGLF_BRSVA 265-280 PHEMA_IAZCO 237-253 PHEMA_IATKM 320-337PVGLF_BRSVC 265-280 PHEMA_IAZH2 221-237 PHEMA_IAUDO 322-339 380-397PVGLF_BRSVR 265-280 PHEMA_IAZH3 221-237 PHEMA_IAVI7 323-340 PVGLF_HRSV1265-280 PHEMA_IAZUK 237-253 PHEMA_IAZCO 322-339 PVGLF_HRSVA 265-280PHEMA_INBAA 115-131 295-310 PHEMA_IAZH2 306-323 PVGLF_HRSVL 265-280PHEMA_INBBE 123-139 303-318 PHEMA_IAZH3 306-323 PVGLF_HRSVR 265-280PHEMA_INBBO 116-132 293-308 PHEMA_IAZUK 322-339 PVGLF_MUMPS  5-94PHEMA_INBEN 123-139 301-316 PHEMA_MUMPM 101-118 PVGLI_VZVD 278-293PHEMA_INBFU 108-124 286-301 PHEMA_MUMPR 101-118 PVGLM_HANTB 900-915PHEMA_INBGL 119-135 296-311 PHEMA_MPMPS 101-118 PVGLM_PTPV 743-758PHEMA_INBHK 116-132 293-308 PHEMA_NDVA  93-110 PVGLM_SEOUR 901-916PHEMA_INBIB 108-124 288-303 PHEMA_NDVB  93-110 PVGLM_SEOUS 900-915PHEMA_INBID 120-136 299-314 PHEMA_NDVD  93-110 PVGLY_LASSG 426-441PHEMA_INBLE 123-139 302-317 PHEMA_NDVH  93-110 PVGLY_LASSJ 427-442PHEMA_INBMD 113-129 292-307 PHEMA_NDVI  93-110 PVGLY_MOPEI 425-440PHEMA_INBME 116-132 296-311 PHEMA_NDVM  93-110 PVM3_REOVD 521-536PHEMA_INBNA 108-124 288-303 PHEMA_NDVQ  93-110 PVMSA_HPBGS 380-395PHEMA_INBOR 123-139 301-316 PHEMA_NDVTG  93-110 PVMSA_HPBV9 187-202PHEMA_INBSI 123-139 301-316 PHEMA_NDVU  93-110 PVMSA_WHV1 378-393PHEMA_INBSJ 119-135 298-313 PHEMA_PHODV 36-53 PVMSA_WHV59 383-398PHEMA_INBUS 116-132 294-309 PHEMA_PI1HW 486-503 PVMSA_WHV7 383-398PHEMA_INBVI 116-132 296-311 PHEMA_PI3B 111-128 PVMSA_WHV8 383-398PHEMA_INBVK 123-139 303-318 PHEMA_PI3H4 111-128 PVMSA_WHV8I 383-398PHEMA_INBYB 108-124 286-301 PHEMA_PI3HA 111-128 PVMSA_WHVW6 234-249PHEMA_MUMPM 133-148 PHEMA_PI3HT 111-128 PVMT2_IAANN 25-40 PHEMA_MUMPR133-148 PHEMA_PI3HU 111-128 PVMT2_IABAN 25-40 PHEMA_MUMPS 133-148PHEMA_PI3HV 111-128 PVMT2_IAFOW 25-40 PHEMA_PI1HW 345-360 PHEMA_PI3HW111-128 PVMT2_IAFPR 25-40 PHEMA_PI2H 65-81 PHEMA_PI3HX 111-128PVMT2_IAFPW 25-40 PHEMA_PI2HT 65-81 PHEMA_PI4HA 50-67 PVMT2_IALE1 25-40PHEMA_PI3B 324-340 PHEMA_SV41  85-102 PVMT2_IALE2 25-40 PHEMA_PI3H4324-340 PHEMA_SV5  84-101 PVMT2_IAMAN 25-40 PHEMA_PI3HA 324-340PHEMA_SV5CM  84-101 PVMT2_IAPUE 25-40 PHEMA_PI3HT 324-340 PHEMA_SV5CP 84-101 PVMT2_IASIN 25-40 PHEMA_PI3HU 324-340 PHEMA_SV5LN  84-101PVMT2_IAUDO 25-40 PHEMA_PI3HV 324-340 PVFO5_VACCC 280-297 PVMT2_IAWIL25-40 PHEMA_PI3HW 324-340 PVFO5_VACCP 280-297 PVMT9_MYXVL 226-241PHEMA_PI3HX 324-340 PVFO5_VACCV 281-298 PHEMA_RINDK 368-383 PVFO9_VACCC176-193 PHEMA_SV5  7-94 PVFO9_VACCV 176-193 PHEMA_SV5CM  7-94PVG27_HSVSA 209-226 PHEMA_SV5CP  7-94 PVG28_HSVI1 173-190 PHEMA_SV5LN 7-94 PVG39_HSVI1 648-665 PVENV_DHVI1 42-57 PVG43_HSVI1 109-126 521-538PVENV_EAV 25-41 PVG67_HSVI1 171-188 PVFP2_FOWPV  88-104 PVG72_HSVI11252-1269 PVFP7_CAPVK  89-104 PVGF1_IBVB 3073-3090 PVFUS_VACC6 72-87PVGL2_IBV6 1094-1111 PVG01_HSVEB 169-184 PVGLB_HSVE1 736-753 PVG01_HSVI1209-225 317-332 PVGLB_HSVE4 675-692 PVG08_HSVI1 134-149 PVGLB_HSVEA736-753 PVG10_HSVSA 109-124 PVGLB_HSVEB 736-753 PVG11_HSVI1 103-119PVGLB_HSVEL 736-753 PVG12_HSVI1 270-286 PVGLB_ILTV6 597-614 PVG1_SPV1R76-92 PVGLB_ILTV5 607-624 PVG29_HSVI1 20-35 PVGLB_ILTVT 607-624PVG86_BPOX2 22-37 PVGLC_PRVIF 180-197 PVG36_HSVSA 108-123 PVGLE_VZVD469-486 PVG37_HSVI1 284-299 PVGLF_SV5 401-418 PVG41_HSVI1 244-260PVGLH_HCMVA 365-382 PVG46_HSVI1 1244-1260 PVGLH_HCMVT 364-381PVG55_HSVI1 22-37 143-158 PVGLH_HSV11 245-262 803-820 PVG56_HSVI1268-283 PVGLH_HSV1E 245-262 803-820 PVG58_HSVI1 101-117 PVGLI_HSV1143-60 PVG58_HSVSA 130-146 330-346 PVGLM_BUNL7 81-98 PVG59_HSVI1 267-282PVGLM_BUNSH 81-98 PVG65_HSVI1 362-378 518-533 PVGLM_PUUMH 712-729PVG71_HSVSA  89-105 PVGLM_PUUMS 712-729 PVG9_BPPH2 234-249 PVGLM_RVFV344-361 PVG9_BPPZA 234-249 PVGLM_RVFVZ 344-361 PVG9_SPV1R 57-72PVGLY_LASSG 12-94 PVGF1_IBVB 2210-2226 PVGLY_LASSJ 12-94 PVGL2_CVBF123-139 174-190 264-279 PVGLY_LYCVA 12-94 PVGL2_CVBL9 123-139 174-190264-279 PVGLY_LYCVW 12-94 PVGL2_CVBLY 123-139 174-190 264-279PVGLY_MOPEI 12-94 PVGL2_CVBM 123-139 174-190 264-279 PVM1_REOVD 280-297PVGL2_CVBQ 31-47 123-139 174-190 264-279 PVM1_REOVL 280-297 PVGL2_CVBV123-139 174-190 264-279 PVMAT_CDVO 148-165 PVGL2_CVM4  95-111 1267-1283PVMAT_MEASI  87-104 PVGL2_CVMA5  95-111 1216-1231 PVMP_CAMVC 147-164PVGL2_CVMJH  95-111 1126-1142 PVMP_CAMVD 147-164 PVGL2_CVPFS 442-457800-818 1274-1290 PVMP_CAMVE 147-164 PVGL2_CVPPU 440-455 504-519 798-8141272-1288 PVMP_CAMVN 147-164 PVGL2_CVPR8 218-233 576-592 1050-1066PVMP_CAMVS 147-164 PVGL2_CVPRM 218-233 576-592 1050-1066 PVMP_CAMVW147-164 PVGL2_FIPV 803-819 1277-1293 PVMSA_HPBVO 11-94 PVGL2_IBV61056-1071 PVMSA_HPBV2 185-202 PVGL2_IBVB 1055-1070 PVMSA_HPBV4 185-202PVGL2_IBVD2 1056-1071 PVMSA_HPBVA 174-191 PVGL2_IBVK 1055-1070PVMSA_HPBVD 11-94 PVGL2_IBVM 1055-1070 PVMSA_HPBVJ 174-191 PVGLB_HSVSA701-716 PVMSA_HPBVL 174-191 PVGLB_PRVIF 203-218 PVMSA_HPBVN 11-94PVGLB_VZVD 522-538 PVMSA_HPBVO 174-191 PVGLC_HSVBC 475-490 PVMSA_HPBVP185-202 PVGLC_HSVE4 444-459 PVMSA_HPBVR 185-202 PVGLC_HSVEB 427-442PVMSA_HPBVS 11-94 PVGLC_PRVIF 446-461 PVMSA_HPBVW 174-191 PVGLC_VZVD150-166 PVMSA_HPBVY 174-191 PVGLC_VZVS 150-166 PVMSA_HPBVZ 174-191PVGLD_HSV11 79-94 PVMT2_IAANN 25-42 PVGLD_HSV2 79-94 PVMT2_IABAN 25-42PVGLE_PRVRI  3-94 PVMT2_IAFOW 25-42 PVGLF_BRSVA 205-221 265-280PVMT2_IAFPR 25-42 PVGLF_BRSVC 205-221 265-280 PVMT2_IAFPW 25-42PVGLF_BRSVR 205-221 265-280 PVMT2_IALE1 25-42 PVGLF_COVO 398-414PVMT2_IALE2 25-42 PVGLF_HRSV1 205-221 265-280 PVMT2_IAMAN 25-42PVGLF_HRSVA 205-221 265-280 PVMT2_IAPUE 25-42 PVGLF_HRSVL 205-221265-280 PVMT2_IASIN 25-42 PVGLF_HRSVR 205-221 265-280 PVMT2_IAUDO 25-42PVGLF_MEASE 286-302 PVMT2_IAWIL 25-42 PVGLF_MEASI 289-305 PVGLF_MEASY286-302 PVGLF_MUMPM 276-292 PVGLF_MUMPR 276-292 PVGLF_MUMPS  5-94276-292 PVGLF_NDVA 273-289 PVGLF_NDVB 273-289 PVGLF_NDVM 273-289PVGLF_NDVT 273-289 PVGLF_NDVTG 273-289 PVGLF_NDVU 273-289 PVGLF_PHODV269-285 367-383 PVGLF_RINDK 282-298 PVGLF_RINDL 282-298 PVGLF_TRTV175-191 PVGLI_VZVD 278-293 PVGLM_HANTB 355-371 900-915 PVGLM_HANTH499-515 PVGLM_HANTL 499-515 PVGLM_HANTV 499-515 PVGLM_PTPV 743-758PVGLM_PUUMH 509-525 PVGLM_PUUMS 509-525 PVGLM_SEOUR 355-371 901-916PVGLM_SEOUS 355-371 900-915 PVGLM_UUK 826-842 PVGLP_BEV 869-885PVGLY_LASSG 12-94 426-441 PVGLY_LASSJ 12-94 427-442 PVGLY_LYCVA 12-94PVGLY_LYCVW 12-94 PVGLY_MOPEI 12-94 425-440 PVGLY_PIARV 12-94 PVGNM_CPMV1021-1037 PVM3_REOVD 521-536 PVMAT_MUMPS 191-207 PVMAT_NDVA 135-151PVMAT_NDVB 135-151 PVMAT_PI2HT 189-205 PVMAT_SV41 189-205 PVMAT_SV5 98-114 132-148 PVMP_CAMVC 118-134 PVMP_CAMVD 118-134 PVMP_CAMVE 118-134PVMP_CAMVN 118-134 PVMP_CAMVS 118-134 PVMP_CAMVW 118-134 PVMP_FMVD115-131 PVMSA_HPBGS 380-395 PVMSA_HPBV9 187-202 PVMSA_WHV1 378-393PVMSA_WHV59 383-398 PVMSA_WHV7 383-398 PVMSA_WHV8 383-398 PVMSA_WHV8I383-398 PVMSA_WHVW6 234-249 PVMT2_IAANN 25-40 PVMT2_IABAN 25-40PVMT2_IAFOW 25-40 PVMT2_IAFPR 25-40 PVMT2_IAFPW 25-40 PVMT2_IALE1 25-40PVMT2_IALE2 25-40 PVMT2_IAMAN 25-40 PVMT2_IAPUE 25-40 PVMT2_IASIN 25-40PVMT2_IAUDO 25-40 PVMT2_IAWIL 25-40 PVMT9_MYXVL 226-241

TABLE XI Search Results Summary for P3CTLZIP, P4CTLZIP, P5CTLZIP, andP6CTLZIP Motifs P3CTLZIP P4CTLZIP P5CTLZIP P6CTLZIP LIBRARY FILE LIBRARYFILE LIBRARY FILE LIBRARY FILE PENV_BIV27 147-165 PENV1_FRSFV 380-399PENV1_FRSFV 380-400 PENV_BIVO6 47-68 525-546 PENV_CAEVC 810-828PENV_AVISU  98-117 PENV2_FRSFV 380-400 PENV_BIV27 47-68 147-168 564-575PENV_CAEVG 808-826 PENV_BIV27 147-166 PENV_BAEVM 170-190 PENV_FENV1225-246 630-651 PENV_HV2BE 750-768 PENV_HV1ZH 123-142 PENV_FIVPE 781-801PENV_FLVC6 624-645 PENV_HV2D1 741-759 PENV_HV2D2  9-29 PENV_FIVSD779-799 PENV_FLVGL 447-468 605-626 PENV_HV2G1 741-759 PENV_HV2SB 778-797PENV_FIVT2 780-800 PENV_FLVLB 467-488 625-646 PENV_HV2NZ 742-760PENV_JSRV 541-560 PENV_FLVGL  9-29 PENV_FLVSA 444-465 602-623 PENV_HV2RO751-769 PENV_RSVP 533-552 PENV_FOAMV 255-275 924-944 PENV_FOAMV 153-174957-978 PENV_HV2SB 743-761 PHEMA_VACCC 173-192 PENV_FSVGA  9-29PENV_FSVGA 467-488 625-646 PENV_HV2ST 745-763 PHEMA_VACCI 173-192PENV_HV1C4 428-448 PENV_FSVGB 447-468 605-626 PENV_JSRV 376-394PHEMA_VACCT 173-192 PENV_HV2CA 750-770 PENV_FSVSM 450-471 608-629PHEMA_PI2H 118-136 PHEMA_VACCV 173-192 PENV_MLVF5 400-420 PENV_FSVST467-488 PHEMA_PI2HT 118-136 PVENV_BEV 62-81 PENV_MMTVB 643-663 PENV_GALV52-73 519-540 PHEMA_SV41 55-73 PVENV_MCV1 61-80 PENV_MMTVG 643-663PENV_HV2BE 750-771 PVENV_THOGV 473-491 PVENV_MCV2 61-80 PENV_OMVVS 75-95PENV_HV2G1 741-762 PVG16_BPP22  83-101 PVFUS_ORFNZ 29-48 PENV_RSVP 42-62PENV_HV2NZ 742-763 PVG24_BPT4 115-133 PVGO1_HSVEB 169-188 PENV_SFV1924-944 PENV_HV2RO 751-772 PVG36_HSVSA 344-362 PVGO1_VACCC 376-395PENV_SFV3L 921-941 PENV_HV2ST 745-766 PVG40_HSVI1 14-32 PVGO1_VACCV315-334 PENV_SIVM1 766-786 PENV_MCFF 600-621 PVG50_HSVSA  5-94PVGO1_VARV 376-395 PENV_SIVMK 765-785 PENV_MCFF3 601-622 PVG51_BPT463-81 PVGO6_BPT4 627-646 PENV_SIVML 764-784 PENV_MLVAV 630-651PVG51_HSVI1  84-102 PVG10_HSVI1 35-54 PENV_SIVS4 769-789 PENV_MLVCB625-646 PVG65_HSVI1 155-173 PVG11_HSVI1 103-122 150-169 PENV_SIVSP773-793 PENV_MLVF5 639-660 PVGF1_IBVB 2788-2806 3374-3392 PVG1_BPPH231-50 PHEMA_CDVO 493-513 PENV_MLVFF 639-660 PVGL2_CVH22 1053-1071PVG1_SPV1R 659-678 PHEMA_CVBLY 391-411 PENV_MLVFP 639-660 PVGL2_IBV61056-1074 PVG20_BPT4 231-250 PHEMA_CVBM 391-411 PENV_MLVHO 626-647PVGL2_IBVB 1055-1073 PVG32_VZVD  90-109 PHEMA_CVBQ 391-411 PENV_MLVKI167-188 PVGL2_IBVD2 1056-1074 PVG36_BPK3 132-151 PHEMA_CVHOC 391-411PENV_MLVMO 629-650 PVGL2_IBVK 1055-1073 PVG37_BPT2 19-38 629-648PHEMA_CVMA5 402-422 PENV_MLVRD 624-645 PVGL2_IBVM 1055-1073 PVG37_BPT419-38 625-644 PHEMA_IACKG  81-101 PENV_MLVRK 624-645 PVGLB_HSVB1 560-578689-707 PVG39_HSVI1 1038-1057 PHEMA_IADMA  81-101 PENV_MSVFB 170-191PVGLB_HSVBC 692-710 PVG41_HSVI1 62-81 PHEMA_MUMPM 397-417 PENV_RMCFV603-624 PVGLB_HSVSA 584-602 PVG43_BPPF3 380-399 PHEMA_MUMPR 397-417PENV_SFV1 957-978 PVGLB_ILTV6 740-758 PVG46_BPPF1 337-356 PHEMA_MUMPS397-417 PENV_SFV3L 157-178 954-975 PVGLB_ILTVS 750-768 PVG59_HSVI1142-161 PHEMA_PHODV 493-513 PENV_SIVA1 437-458 PVGLB_ILTVT 750-768PVG61_HSVI1 117-136 PHEMA_PI1HW 322-342 PENV_SIVAG 442-463 PVGLC_VZVD431-449 PVG67_HSVI1 318-337 1072-1091 PHEMA_PI2H 13-33 PENV_SIVAI421-442 PVGLC_VZVS 431-449 PVGF1_IBVB 1587-1606 2108-2127 PHEMA_PI2HT13-33 PENV_SIVAT 435-456 PVGLF_PI3H4  2-94 PVGL2_CVBF  991-1010PHEMA_RINDL 497-517 PENV_SMSAV 42-63 PVGLH_HSV6G 314-332 PVGL2_CVBL9 991-1010 PHEMA_SEND5 322-342 PHEMA_CVMA5 402-423 PVGLH_HSVE4 814-832PVGL2_CVBLY  991-1010 PHEMA_SENDF 322-342 PHEMA_IADE1 266-287PVGLH_HSVEB 807-825 PVGL2_CVBM  991-1010 PHEMA_SENDH 322-342 PHEMA_MUMPM225-246 PVGLI_HSV11  5-94 PVGL2_CVBQ  991-1010 PHEMA_SENDJ 322-342PHEMA_MUMPR 225-246 PVGNM_BPMV 678-696 PVGL2_CVBV  991-1010 PHEMA_SENDZ322-342 PHEMA_MUMPS 225-246 PVMO1_VACCC 134-152 177-195 PVGL2_CVH22768-787 1115-1134 PVENV_LELV 27-47 148-168 PHEMA_PHODV 213-234PVMO1_VACCV  83-101 126-144 PVGL2_CVM4  999-1018 PVENV_THOGV 356-376PHEMA_PI2H 13-34 PVM1_REOVD 227-245 PVGL2_CVMA5 947-966 PVGO1_VACCC298-318 PHEMA_PI2HT 13-34 PVM1_REOVL 227-245 PVGL2_CVMJH 858-877PVGO1_VACCV 237-257 PHEMA_SV5 7-28 379-400 PVMAT_HRSVA 44-62 PVGL2_CVPFS64-83 1038-1057 PVGO1_VARV 298-318 PHEMA_SV5CM  7-28 379-400 PVMAT_NDVA190-208 PVGL2_CVPPU 64-83 1036-1055 PVGO6_VACCC 31-51 PHEMA_SV5CP  7-28379-400 PVMAT_NDVB 190-208 PVGL2_CVPR8 814-833 PVGO6_VARV 31-51PHEMA_SV5LN 7-28 379-400 PVMP_CAMVC 183-201 PVGL2_CVPRM 814-833PVGO9_BPPF1 25-45 PVGO1_HSVEB 169-190 PVMP_CAMVD 183-201 PVGL2_FIPV1041-1060 PVG12_HSVI1 151-171 PVGO1_HSVI1 589-610 PVMP_CAMVE 183-201PVGL2_IBV6 588-607 771-790 PVG22_HSVI1 300-320 PVG23_HSVI1 314-335PVMP_CAMVN 183-201 PVGL2_IBVB 587-606 770-789 PVG39_HSVI1 648-668970-990 PVG37_BPOX2 65-86 PVMP_CAMVS 183-201 PVGL2_IBVD2 588-607 771-790PVG51_HSVI1 29-49 PVG43_HSVI1 157-178 PVMP_CAMVW 183-201 PVGL2_IBVK587-606 770-789 PVG63_HSVI1 336-356 PVG55_HSVI1 288-309 PVMP_FMVD180-198 PVGL2_IBVM 587-606 770-789 PVG65_HSVI1 117-137 PVG55_HSVSA 85-106 PVGLB_HCMVA 706-725 PVG74_HSVSA 124-144 PVG56_HSVI1 1155-1176PVGLB_HCMVT 707-726 PVGL2_IBV6 328-348 PVG58_HSVSA 266-287 PVGLB_HSV6U117-136 PVGL2_IBVB 327-347 PVG60_HSVI1 30-51 PVGLB_ILTV6 256-275PVGL2_IBVD2 328-348 PVG83_HSVI1 238-259 PVGLB_ILTVS 266-285 PVGL2_IBVD3328-348 PVGF1_IBVB 1856-1877 PVGLB_ILTVT 266-285 PVGL2_IBVK 327-347PVGH3_HCMVA 157-178 PVGLC_HSV11  3-94 467-486 PVGL2_IBVM 327-347 378-398PVGL2_CVBF 1259-1280 PVGLC_HSV1K  3-94 467-486 PVGL2_IBVU2 310-330PVGL2_CVBL9 1259-1280 PVGLC_HSVBC 475-494 PVGLB_EBV 732-752 PVGL2_CVBLY1259-1280 PVGLG_CHAV 436-455 PVGLB_HCMVA 750-770 PVGL2_CVBM 1259-1280PVGLG_RABVH 372-391 PVGLB_HCMVT 751-771 PVGL2_CVBQ 1259-1280 PVGLI_HSVEB44-63 PVGLB_HSV23 79-99 PVGL2_CVBV 1259-1280 PVGLI_VZVD 278-297PVGLB_HSV2H 79-99 PVGL2_CVM4 1317-1338 PVGLM_BUNGE 117-136 PVGLB_HSV2S65-85 PVGL2_CVMA5 1265-1286 PVGLM_PHV 152-171 PVGLB_HSV6U 72-92PVGL2_CVMJH 1176-1197 PVGLM_PTPV  997-1016 PVGLB_HSVB2 279-299PVGLB_HSV11 83-104 PVGLM_PUUMH 155-174 PVGLB_HSVSA 63-83 PVGLB_HSV1F 82-103 PVGLM_PUUMS 155-174 PVGLB_MCMVS 738-758 PVGLB_HSV1K  82-103PVGLM_RVFV 830-849 PVGLF_PI3H4 283-303 PVGLB_HSV1P  83-104 PVGLM_RVFVZ830-849 PVGLG_RABVE 454-474 PVGLB_MCMVS 135-156 PVGLM_UUK 655-674PVGLG_RABVH 454-474 PVGLC_PRVIF 446-467 PVGLY_LYCVW  89-108 PVGLG_RABVP454-474 PVGLF_CDVO 336-357 PVGNB_CPMV 1165-1184 PVGLG_RABVS 454-474PVGLF_MEASE 224-245 PVM3_REOVD 521-540 PVGLG_RABVT 454-474 PVGLF_MEASI227-248 PVME1_CVBM 171-190 PVGLH_MCMVS 670-690 PVGLF_MEASY 224-245PVME1_CVH22 136-155 PVGLM_BUNL7 1325-1345 PVGLF_MUMPM 446-467PVME1_CVPFS 174-193 PVGLM_BUNSH 1325-1345 PVGLF_MUMPR 446-467PVME1_CVPPU 174-193 PVGLM_BUNYW  996-1016 PVGLF_MUMPS 446-467PVME1_CVPRM 174-193 PVGLM_HANTB  999-1019 PVGLF_PHODV 305-326PVME1_CVTKE 171-190 PVGLM_HANTH 1000-1020 PVGLF_PI1HC 456-477PVGLM_HANTL 1001-1021 PVGLF_PI2H 450-471 PVGLM_HANTV 1001-1021PVGLF_PI2HG 450-471 PVGLM_RVFVZ 1156-1176 PVGLF_PI2HT 450-471PVGLM_SEOUR 1000-1020 PVGLF_PI3B 405-426 453-474 PVGLM_SEOUS  999-1019PVGLF_PI3H4 453-474 PVGLM_UUK 925-945 PVGLF_RINDK 220-241 PVGLY_LYCVA12-32 PVGLF_RINDL 220-241 PVGLY_LYCVW 12-32 PVGLF_SEND5 460-481PVGLY_PIARV 12-32 PVGLF_SENDF 460-481 PVGNB_CPMV 141-161 PVGLF_SENDH460-481 PVMAT_MUMPS 310-330 PVGLF_SENDJ 460-481 PVMAT_NDVA 309-329PVGLF_SENDZ 460-481 PVMAT_NDVB 309-329 PVGLF_SV41 453-474 PVMAT_PI2HT308-328 PVGLF_SV5 446-467 PVMAT_PI4HA 312-332 PVGLH_HCMVA 691-712PVMAT_PI4HB 312-332 PVGLH_HCMVT 690-711 PVMAT_SV41 308-328 PVGLH_HSVE4304-325 PVMAT_SV5 308-328 PVGLH_HSVEB 297-318 PVME1_IBV6 74-94PVGLH_HSVSA 658-679 PVME1_IBVB 74-94 PVGLI_HSV2  2-23 PVME1_IBVB2 74-94PVGLI_HSV23  2-23 PVME1_IBVK 74-94 PVGLM_BUNGE 197-218 PVMSA_HPBDB201-221 PVGLM_BUNL7 190-211 PVMSA_HPBGS 209-229 PVGLM_BUNSH 190-211PVMSA_HPBHE 293-313 PVGLM_BUNYW 193-214 PVMSA_WHV1 207-227 PVGLY_LASSG237-258 PVMSA_WHV59 212-232 PVGLY_LASSJ 238-259 PVMSA_WHV7 212-232PVGP8_EBV 67-88 PVMSA_WHV8 212-232 PVMO1_VACCC 281-302 PVMSA_WHVBI212-232 PVMO1_VACCV 230-251 PVMSA_WHVW6 63-83 PVMAT_HRSVA 139-160PVMAT_RINDK 200-221 239-260 PVMAT_TRTV 122-143 PVME1_CVHOC 64-85PVMSA_HPBDB 201-222 PVMSA_HPBVO 70-91 PVMSA_HPBV2 244-265 PVMSA_HPBV4244-265 PVMSA_HPBV9 244-265 PVMSA_HPBVA 233-254 PVMSA_HPBVD 70-91PVMSA_HPBVI 233-254 PVMSA_HPBVJ 233-254 PVMSA_HPBVL 233-254 PVMSA_HPBVN70-91 PVMSA_HPBVO 233-254 PVMSA_HPBVP 244-265 PVMSA_HPBVR 244-265PVMSA_HPBVS 70-91 PVMSA_HPBVW 233-254 PVMSA_HPBVY 233-254 PVMSA_HPBVZ233-254 PVMT2_IAANN 25-46 PVMT2_IABAN 25-46 PVMT2_IAFOW 25-46PVMT2_IAFPR 25-46 PVMT2_IAFPW 25-46 PVMT2_IALE1 25-46 PVMT2_IALE2 25-46PVMT2_IAMAN 25-46 PVMT2_IAPUE 25-46 PVMT2_IASIN 25-46 PVMT2_IAUDO 25-46PVMT2_IAWIL 25-46

TABLE XII Search Results Summary for P7CTLZIP, P8CTLZIP, and P9CTLZIPMotifs P7CTLZIP P8CTLZIP P9CTLZIP LIBRARY FILE LIBRARY FILE LIBRARY FILEPENV_BAEVM 202-224 PENV1_FRSFV 380-403 PENV_BLVAF 303-327 PENV_HV1B1498-520 PENV2_FRSFV 380-403 PENV_BLVAU 303-327 PENV_HV1B8 493-516PENV_BIVO6 178-201 PENV_BLVAV 303-327 PENV_HV1BN 494-516 PENV_BIV27207-230 PENV_BLVB2 303-327 PENV_HV1BR 503-525 PENV_FOAMV 864-887PENV_BLVB6 303-327 PENV_HV1EL 495-517 PENV_HV1Z3 175-198 PENV_BLVJ303-327 PENV_HV1H2 498-520 PENV_HV2BE  3-26 781-804 PENV_FIVPE 781-805PENV_HV1H3 498-520 PENV_HV2CA 750-773 PENV_FIVSD 779-803 PENV_HV1J3510-532 PENV_HV2D1  3-26 772-795 PENV_FIVT2 780-804 PENV_HV1JR 490-512PENV_HV2G1 772-795 PHEMA_CVBLY 391-415 PENV_HV1KB 504-526 PENV_HV2NZ777-800 PHEMA_CVBM 391-415 PENV_HV1MA 500-522 PENV_JSRV 541-564PHEMA_CVBQ 391-415 PENV_HV1MF 496-518 PENV_SFV1 864-887 PHEMA_CVHOC391-415 PENV_HV1ND 488-510 PENV_SFV3L 861-884 PHEMA_INCCA 442-466PENV_HV1PV 498-520 PENV_SIVM1 803-826 PHEMA_INCEN 430-454 PENV_HV1S1489-511 PENV_SIVMK 802-825 PHEMA_INCGL 430-454 PENV_HV1Z2 123-145495-517 PENV_SIVML 801-824 PHEMA_INCHY 429-453 PENV_HV1Z6 497-519PENV_SIVS4 806-829 PHEMA_INCJH 443-467 PENV_HV1Z8 505-527 PENV_SIVSP810-833 PHEMA_INCKY 429-453 PENV_HV1ZH 498-520 PHEMA_CDVO 200-223PHEMA_INCMI 429-453 PENV_JSRV 376-398 PHEMA_PI2H 65-88 PHEMA_INCNA429-453 PENV_MPMV 213-235 PHEMA_PI2HT 65-88 PHEMA_INCP1 430-454PENV_SRV1 213-235 PVF11_VACCC 161-184 PHEMA_INCP2 430-454 PHEMA_IAAIC37-59 PVF15_VACCC 25-48 PHEMA_INCP3 430-454 PHEMA_IABAN 21-43PVF16_VACCP  3-26 PHEMA_INCTA 430-454 PHEMA_IADA3 37-59 PVG1L_AMEPV313-336 PHEMA_INCYA 430-454 PHEMA_IADH2 21-43 PVG28_HSVI1 491-514PHEMA_MUMPM 101-125 PHEMA_IADH3 21-43 PVG43_HSVI1 322-345 PHEMA_MUMPR101-125 PHEMA_IADH4 21-43 PVG52_HSVI1 229-252 PHEMA_MUMPS 101-125PHEMA_IADH5 21-43 PVG67_HSVI1 722-745 PHEMA_PI1HW 29-53 PHEMA_IADH621-43 PVGL2_CVBF 10-33 PVENV_BEV 62-86 PHEMA_IADH7 21-43 PVGL2_CVBL9651-674 PVFO5_VACCC 280-304 PHEMA_IADM2 37-59 PVGL2_CVBLY 10-33PVFO5_VACCP 280-304 PHEMA_IADMA 28-50 PVGL2_CVM4 1267-1290 PVFO5_VACCV281-305 PHEMA_IADU3 37-59 PVGL2_CVMA5 1215-1238 PVFO9_VACCC 176-200PHEMA_IAEN6 21-43 PVGL2_CVMJH 1126-1149 PVFO9_VACCV 176-200 PHEMA_IAEN737-59 PVGL2_CVPFS 1274-1297 PVGO1_VZVD 58-82 PHEMA_IAMAO 37-59PVGL2_CVPPU 1272-1295 PVG10_HSVSA 355-379 PHEMA_IAME1 37-59 PVGL2_CVPR81050-1073 PVG12_HSVSA 68-92 PHEMA_IAME2 37-59 PVGL2_CVPRM 1050-1073PVG19_HSVI1 88-112 PHEMA_IAME6 21-43 PVGL2_FIPV 1277-1300 PVG28_HSVI1173-197 PHEMA_IANT6 37-59 PVGL2_IBV6 196-219 PVG43_HSVI1 109-133PHEMA_IAQU7 21-43 PVGL2_IBVB 195-218 PVG87_HSVI1 108-132 1005-1029PHEMA_IATKM 33-55 PVGL2_IBVD2 196-219 PVG72_HSVI1 720-744 PHEMA_IAUDO37-59 PVGL2_IBVD3 196-219 PVGF1_IBVB 3601-3625 PHEMA_IAVI7 38-60PVGL2_IBVK 195-218 PVGLB_HSVMD 589-613 PHEMA_IAX31 37-59 PVGL2_IBVM195-218 PVGLB_ILTV6 597-621 PHEMA_IAZCO 37-59 PVGL2_IBVU1 178-201PVGLB_ILTVS 607-631 PHEMA_IAZH2 21-43 PVGL2_IBVU2 178-201 PVGLB_ILTVT607-631 PHEMA_IAZH3 21-43 PVGL2_IBVU3 178-201 PVGLE_HSV11 413-437PHEMA_IAZUK 37-59 PVGLB_HCMVA 535-558 PVGLE_VZVD 469-493 PHEMA_PHODV36-58 PVGLB_HCMVT 536-559 PVGLF_SV5 401-425 PHEMA_PI2H 65-87 PVGLB_HSVSA483-506 PVGLH_HCMVA 574-598 PHEMA_PI2HT 65-87 PVGLB_MCMVS 566-589PVGLH_HCMVT 573-597 PVFP7_CAPVK  89-111 PVGLC_HSV11 467-490 PVGLH_HSV11443-467 803-827 PVFUS_VACC6 72-94 PVGLC_HSV1K 467-490 PVGLH_HSV1E443-467 803-827 PVGO1_HSVI1 317-339 PVGLC_HSV2 435-458 PVGLM_BUNL7 31-55PVGO3_VACCC 50-72 PVGLC_HSV23 436-459 PVGLM_BUNSH 31-55 PVGO3_VARV 50-72PVGLM_BUNL7 1387-1410 PVGLM_HANTH 694-718 PVGO4_VACCC 11-33 PVGLM_BUNSH1387-1410 PVGLM_RVFV 344-368 PVGO4_VARV 11-33 PVGLM_UUK 966-989PVGLM_RVFVZ 344-368 PVG19_HSVI1  88-110 PVGLY_JUNIN 12-35 PVGLM_UUK561-585 PVG28_HSVI1 173-195 PVGLY_LASSG 12-35 PVGNM_CPMV 311-335PVG29_HSVI1 20-42 PVGLY_LASSJ 12-35 PVGP2_EBV 657-681 PVG46_HSVI1134-156 PVGLY_LYCVA 12-35 PVGP3_EBV 854-878 PVG48_HSVSA 71-93PVGLY_LYCVW 12-35 PVM1_REOVD 280-304 PVG58_HSVSA 266-288 PVGLY_MOPEI12-35 PVM1_REOVL 280-304 PVG59_HSVI1 267-289 PVGLY_TACV 12-35PVM21_REOVD 168-192 PVG5_SPV4 42-64 PVGLY_TACV5 12-35 PVM22_REOVD168-192 PVG60_HSVI1 63-75 PVGLY_TACV7 12-35 PVM2_REOVJ 168-192PVG65_HSVI1 1347-1369 PVGLY_TACVT 12-35 PVM2_REOVL 168-192 PVG6_SPV1R60-82 PVGNM_CPMV 741-764 PVMAT_MEASI  87-111 PVGL2_IBV6 1056-1078PVM1_REOVD 324-347 454-477 PVMAT_SSPVB 314-338 PVGL2_IBVB 1055-1077PVM1_REOVL 454-477 PVME1_CVBM 137-161 PVGL2_IBVD2 1056-1078 PVMAT_MUMPS227-250 PVME1_CVHOC 137-161 PVGL2_IBVK 1055-1077 PVMSA_HPBDB 269-292PVME1_CVTKE 137-161 PVGL2_IBVM 1055-1077 PVMSA_HPBDC 268-291 PVME1_IBV674-98 PVGLB_HSVSU 117-139 PVMSA_HPBDU 231-254 PVME1_IBVB 74-98PVGLB_HSVB2 745-767 PVMSA_HPBDW 269-292 PVME1_IBVB2 74-98 PVGLC_HSVMB399-421 PVMSA_HPBHE 236-259 PVME1_IBVK 74-98 PVGLC_HSVMG 398-420PVMSA_HPBGS 271-295 PVGLC_HSVMM 399-421 PVMSA_WHV1 289-293 PVGLF_BRSVA265-287 482-504 PVMSA_WHV59 274-298 PVGLF_BRSVC 484-506 PVMSA_WHV7274-298 PVGLF_BRSVR 484-506 PVMSA_WHV8 274-298 PVGLF_HRSV1 484-506PVMSA_WHV8I 274-298 PVGLF_HRSVA 484-506 PVMSA_WHVW6 125-149 PVGLF_HRSVL484-506 PVGLF_HRSVR 484-506 PVGLF_TRTV 452-474 PVGLG_IHNV 77-99PVGLG_VHSVO 406-428 PVGLH_HSVE4 814-836 PVGLH_HSVEB 807-829 PVGLI_HCMVA158-180 PVGLM_PTPV 743-765 PVGLP_BEV 430-452 1546-1568 PVGLY_LASSG426-448 PVGLY_LASSJ 427-449 PVGLY_MOPEI 425-447 PVGP2_EBV 657-679PVGP3_EBV 854-876 PVM1_REOVD 414-436 PVM1_REOVL 414-436 PVM3_REOVD304-326 PVMAT_PI1HC 195-217 PVMAT_PI2HT 132-154 PVMAT_SENDF 195-217PVMAT_SENDH 195-217 PVMAT_SENDZ 195-217 PVMAT_SV41 132-154 PVMEM_EBV131-153 PVMP_CERV 293-315

TABLE XIII SEARCH RESULTS SUMMARY FOR P12LZIPC MOTIF PCGENE P12CTLZIPAll Viruses (No Bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 AREA 8 AREA 9 P194K_TRVSY POTENTIAL194 KD PROTEIN TOBACCO RATTLE VIRUS 360-378 463-478 600-619 641-6681011-1030 1299-1325 1385-1409 (STRAIN SYM) P3BHS_VACCC 3BETA-HSDVACCINIA VIRUS (STRAIN 41-56 297-321 COPENHAGEN) P3BHS_VACCV 3BETA-HSDVACCINIA VIRUS (STRAIN WR) 41-56 297-321 P3BHS_VARV 3BETA-HSD VARIOLAVIRUS 41-56 PAT3H_FOWPM ANTITHROMBIN-III FOWLPOX VIRUS (ISOLATE 47-69HOMOLOG HP-438[MUNICH]) PATI1_VACCV 94 KD A-TYPE INCLU- VACCINIA VIRUS387-410 SION PROTEIN (STRAIN WR) PATI1_VARV 81 KD A-TYPE INCLUSIONVARIOLA VIRUS 388-411 PROTEIN PATI2_HSV11 UL46 HERPES SIMPLEX VIRUS279-305 (TYPE I/STRAIN 17) PATI2_HSV1F UL46 HERPES SIMPLEX VIRUS 279-305(TYPE I/STRAIN F) PATI2_HSVEB ALPHA TRANS-INDUCING EQUINE HERPESVIRUSTYPE I 197-222 FACTOR 82 KD PROTEIN (STRAIN AB4P) PATI2_VACCC PUTATIVEA-TYPE INCLUSION VACCINIA VIRUS (STRAIN 215-241 PROTEIN COPENHAGEN)PATI2_VZVD ALPHA TRANS-INDUCING VARICELLA-ZOSTER VIRUS 61-79 377-397FACTOR 74 KD PROTEIN (STRAIN DUMAS) PATI3_VACCV PUTATIVE A-TYPEINCLUSION VACCINIA VIRUS (STRAIN WR) 47-73 PROTEIN PATIN_HSVBP ALPHATRANS-INDUCING BOVINE HERPESVIRUS TYPE I 101-120 277-292 PROTEIN (STRAINP8-2) PATIN_HSVE4 ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE 4 104-123PROTEIN PATIN_HSVEB ALPHA TRANS-INDUCING EQUINE HERPESVIRUS TYPE 1129-148 PROTEIN (STRAIN AB4P) PATIN_VZVD ALPHA TRANS-INDUCINGVARICELLA-ZOSTER VIRUS 203-230 PROTEIN (STRAIN DUMAS) PATI_COWPX A-TYPEINCLUSION PROTEIN COWPOX VIRUS 389-412 1102-1128 PB2_BBV B2 PROTEINBLACK BEETLE VIRUS 31-52 PB701-HSV6G TRANSCRIPTIONAL HERPES SIMPLEXVIRUS 55-78 REGULATORY PROTEIN (TYPE 6/STRAIN GS) PBCRF_EBV BCRF1PROTEIN PRECURSOR EPSTEIN-BARR VIRUS (STRAIN 96-123 B95-8) PBRL1_EBVTRANSCRIPTION ACTIVATOR EPSTEIN-BARR VIRUS 16-32 200-224 BRLF1 (STRAINB95-8) PCAHH_VACCC CELL SURFACE-BINDING VACCINIA VIRUS (STRAIN 188-203PROTEIN COPENHAGEN) PCAHH_VACCV CELL SURFACE-BINDING VACCINIA VIRUS(STRAIN WR) 188-203 PROTEIN PCAHH_VARV CELL SURFACE-BINDING VARIOLAVIRUS 188-203 PROTEIN PCCPH_HSVSA COMPL CONTROL PROTEIN HERPESVIRUSSAIMIRI 326-348 HOMOLOG PREC (STRAIN 11) PCELF_HSV11 CELL FUSION PROTEINHERPES SIMPLEX VIRUS 178-196 212-238 286-309 PRECURSOR (TYPE 1/STRAIN17) PCELF_HSV1K CELL FUSION PROTEIN HERPES SIMPLEX VIRUS 178-196 212-238PRECURSOR (TYPE 1/STRAIN KOS) PCELF_HSV2H CELL FUSION PROTEIN HERPESSIMPLEX VIRUS 178-196 212-238 285-309 PRECURSOR (TYPE 2/STRAIN HG52)PCELF_HSVEB CELL FUSION PROTEIN HERPESVIRUS TYPE 1 205-223 249-268PRECURSOR (STRAIN KENTUCKY A) PCELF_VZVD CELL FUSION PROTEINVARICELLA-ZOSTER VIRUS 246-269 PRECURSOR (STRAIN DUMAS) PCGH2_HSVSACYCLIN HOMOLOG HERPESVIRUS SAIMIRI 35-61 216-242 (STRAIN 11) PCOA1_BFDVCOAT PROTEIN VP1 BUDGERIGAR FLEDGLING 93-110 DISEASE VIRUS PCOA1_POVBACOAT PROTEIN VP1 POLYOMAVIRUS BK (STRAIN AS) 25-52 97-123 233-251PCOA1_POVBK COAT PROTEIN VP1 POLYOMAVIRUS BK 25-52 97-123 233-251PCOA1_POVBO COAT PROTEIN VP1 BOVINE POLYOMAVIRUS 96-120 PCOA1_POVHA COATPROTEIN VP1 HAMSTER POLYOMAVIRUS 16-43 PCOA1_POVJC COAT PROTEIN VP1POLYOMAVIRUS JC 17-44 89-115 225-243 PCOA1_POVLY COAT PROTEIN VP1LYMPHOTROPIC POLYOMAVIRUS 97-123 PCOA1_POVMK COAT PROTEIN VP1 MOUSEPOLYOMAVIRUS (STRAIN 142-160 231-249 KILHAM) PCOA1_SV40 COAT PROTEIN VP1SIMIAN VIRUS 40 27-44 99-125 235-253 PCOA1_TTV1 COAT PROTEIN TP1THERMOPROTEUS TENAX VIRUS 1 80-103 (STRAIN KRA1) PCOA2_POVBO COATPROTEIN VP2 BOVINE POLYOMAVIRUS 77-104 PCOA2_POVLY COAT PROTEIN VP2LYMPHOTROPIC POLYOMAVIRUS 79-102 PCOA2_POVM3 COAT PROTEIN VP2 MOUSEPOLYOMAVIRUS 205-226 (STRAIN 3) PCOA3_TTV1 COAT PROTEIN TP3THERMOPROTEUS TENAX VIRUS 33-55 1 (STRAIN KRA1) PCOAT_ABMVW COAT PROTEINABUTILON MASAIC VIRUS 148-171 (ISOLATE WEST INDIA) PCOAT_BOOLV COATPROTEIN PRECURSOR BOOLARRA VIRUS 383-401 PCOAT_CHVP1 MAJOR CAPSIDPROTEIN PARAMECIUM BURSARIA 364-387 392-409 CHLORELLA VIRUS 1 PCOAT_CLVKCOAT PROTEIN CASSAVA LATENT VIRUS (STRAIN 165-188 WEST KENYAN 844)PCOAT_CLVN COAT PROTEIN CASSAVA LATENT VIRUS (STRAIN 165-188 NIGERIAN)PCOAT_CMVSI COAT PROTEIN CYMBIDIUM MOSAIC VIRUS 58-76 (STRAIN SINGAPORE)PCOAT_CNV COAT PROTEIN CUCUMBER NECROSIS VIRUS 19-42 PCOAT_CSMV COATPROTEIN CHLORIS STRIATE MOSAIC VIRUS 219-238 PCOAT_CTV36 COAT PROTEINCITRUS TRISTEZA VIRUS 72-94 (ISOLATE T36) PCOAT_FCVC6 COAT PROTEINFELINE CALICIVIRUS (STRAIN 564-587 642-664 CFI/68 FIV) PCOAT_FCVF4 COATPROTEIN FELINE CALICIVIRUS (STRAIN 564-587 642-657 JAPANESE F4)PCOAT_FCVF9 COAT PROTEIN FELINE CALICIVIRUS (STRAIN F9) 567-590 645-660PCOAT_FPV COAT PROTEIN VP1 FELINE PANLEUKOPENIA VIRUS 690-705PCOAT_FPV19 COAT PROTEIN VP1 FELINE PANLEUKOPENIA VIRUS 690-705 (STRAIN193) PCOAT_HEVS COAT PROTEIN HELENIUM VIRUS S 47-66 PCOAT_MEVA COATPROTEIN VP1 MINK ENTERITIS VIRUS 685-700 (STRAIN ABASHIRI) PCOAT_MNSVCOAT PROTEIN MELON NECROTIC SPOT VIRUS 37-53 PCOAT_MSTV COAT PROTEINMAIZE STRIPE VIRUS 176-197 204-227 PCOAT_NMV COAT PROTEIN NARCISSUSMOSAIC VIRUS 67-86 PCOAT_NODAV COAT PROTEIN PRECURSOR NODAMURA VIRUS379-394 PCOAT_ORSV COAT PROTEIN ODONTOGLOSSUM RINGSPOT 104-130 VIRUSPCOAT_OYMV COAT PROTEIN ONONIS YELLOW MOSAIC VIRUS 35-52 PCOAT_PAVC2COAT PROTEIN VP2 CANINE PARVOVIRUS 547-562 (TYPE 2/STRAIN A72)PCOAT_PAVC7 COAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN 685-700 780929)PCOAT_PAVCD COAT PROTEIN VP1 CANINE PARVOVIRUS (STRAIN 700-715 CPV-DCORNELL 320) PCOAT_PAVCN COAT PROTEIN VP1 CANINE PARVOVIRUS (STAIN N)711-726 PCOAT_PEMV COAT PROTEIN PRECURSOR PEPPER MOTTLE VIRUS 273-295PCOAT_PMV COAT PROTEIN PAPAYA MOSAIC POTEXVIRUS 85-103 PCOAT_PPMVS COATPROTEIN PEPPER MILD MOTTLE VIRUS 64-84 103-129 (STRAIN SPAIN) PCOAT_PVSPCOAT PROTEIN POTATO VIRUS S (STRAIN 129-147 PERUVIAN) PCOAT_RSV COATPROTEIN RICE STRIPE VIRUS 128-152 PCOAT_SMWLM COAT PROTEIN SATELLITEMAIZE WHITE LINE 51-67 MOSAIC VIRUS PCOAT_SMYEA COAT PROTEIN STRAWBERRYMILD YELLOW 57-72 EDGE-ASSOCIATED VIRUS PCOAT_TAMV GENOME POLYPROTEINTAMARILLO MOSAIC VIRUS 222-237 PCOAT_TBSVB COAT PROTEIN TOMATO BUSHYSTUNT VIRUS 359-383 (STRAIN BS-3) PCOAT_TCV COAT PROTEIN TURNIP CRINKLEVIRUS 73-89 PCOAT_TGMV COAT PROTEIN TOMATO GOLDEN MOSAIC VIRUS 154-177PCOAT_TMGMV COAT PROTEIN TOBACCO MILD GREEN MOSAIC 102-128 VIRUS (TMVSTRAIN U2) PCOAT_TMV COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (VULGARE)PCOAT_TMV06 COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAIN 06)PCOAT_TMVDA COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128 (STRAINDAHLEMENSE) PCOAT_TMVER COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128(STRAIN ER) PCOAT_TMVHR COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128(STRAIN HOLMES RIBGRASS (HR)) PCOAT_TMVO COAT PROTEIN TOBACCO MOSAICVIRUS 102-128 (STRAIN O) PCOAT_TMVOM COAT PROTEIN TOBACCO MOSAIC VIRUS102-128 (STAIN OM) PCOAT_TMVTO COAT PROTEIN TOBACCO MOSAIC VIRUS 102-128(STRAIN TOMATO/L) PCOAT_TNVA COAT PROTEIN TOBACCO NECROSIS VIRUS 119-142(STRAIN A) PCOAT_TNVD COAT PROTEIN TOBACCO NECROSIS VIRUS 108-134(STRAIN D) PCOLL_HSVSC COLLAGEN-LIKE PROTEIN HERPESVIRUS SAIMIRI 71-96(SUBGROUP C/STRAIN 488) PCORA_HPBV2 CORE ANTIGEN HEPATITIS B VIRUS79-100 (SUBTYPE ADW2) PCORA_HPBVA CORE ANTIGEN HEPATITIS B VIRUS 15-31(STRAIN ALPHA1) PCORA_HPBVZ CORE ANTIGEN HEPATITIS B VIRUS 79-100(SUBTYPE ADYW) PDNBI_ADE02 PROBABLE DNA-BINDING HUMAN ADENOVIRUS TYPE 271-93 PROTEIN PDNBI_EBV MAJOR DNA-BINDING EPSTEIN-BARR VIRUS 649-673PROTEIN (STRAIN B95-8) PDNBI_HCMVA MAJOR DNA-BINDING HUMANCYTOMEGALOVIRUS 681-708 PROTEIN (STRAIN AD169) PDNBI_HSV11 MAJORDNA-BINDING HERPES SIMPLEX VIRUS 459-476 597-620 PROTEIN (TYPE 1/STRAIN17) PDNBI_HSV1F MAJOR DNA-BINDING HERPES SIMPLEX VIRUS 459-476 597-620PROTEIN (TYPE 1/STRAIN F) PDNBI_HSV1K MAJOR DNA-BINDING HERPES SIMPLEXVIRUS 459-476 597-620 PROTEIN (TYPE 1/STRAIN KOS) PDNBI_HSVB2 MAJORDNA-BINDING BOVINE HERPESVIRUS TYPE 2 455-472 596-616 PROTEIN (STRAINBMV) PDNBI_HSVEB MAJOR DNA-BINDING EQUINE HERPESVIRUS TYPE 1 810-831PROTEIN (STRAIN AD4P) PDNBI_HSVSA MAJOR DNA-BINDING HERPESVIRUS SAIMIRI108-127 610-629 869-887 974-1000 PROTEIN (STRAIN 11) PDNBI_MCMVS MAJORDNA-BINDING MURINE CYTOMEGALOVIRUS 657-684 PROTEIN (STRAIN SMITH)PDNBI_SCMVC MAJOR DNA-BINDING SIMIAN CYTOMEGALOVIRUS 188-212 643-670PROTEIN (STRAIN COLBURN) PDNLI_VARV DNA LIGASE VARIOLA VIRUS 269-294PDPOL_ADE02 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 2 264-283 828-850PDPOL_ADE05 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 5 264-283 828-850PDPOL_ADE07 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 7 331-350 494-517894-916 PDPOL_ADE12 DNA POLYMERASE HUMAN ADENOVIRUS TYPE 12 262-281562-583 826-848 PDPOL_CBEPV DNA POLYMERASE CHORISTONEURA BIENNIS 430-454654-678 732-757 ENTOMOPOXVIRUS PDPOL_CHVN2 DNA POLYMERASE CHLORELLAVIRUS NY-2A 424-442 PDPOL_CHVP1 DNA POLYMERASE PARAMECIUM BURSARIA153-172 424-442 CHLORELLA VIRUS 1 PDPOL_EBV DNA POLYMERASE EPSTEIN-BARRVIRUS 354-374 438-463 524-542 667-687 973-990 (STRAIN B95-8) PDPOL_FOWPVDNA POLYMERASE FOWLPOX VIRUS 60-77 220-247 PDPOL_HCMVA DNA POLYMERASEHUMAN CYTOMEGALOVIRUS 569-587 945-960 1029-1053 (STRAIN AD169)PDPOL_HPBDB DNA POLYMERASE DUCK HEPATITIS B VIRUS 4-29 157-174 522-541554-572 (BROWN SHANGHAI DUCK ISOLATE S5) PDPOL_HPBDC DNA POLYMERASE DUCKHEPATITIS B VIRUS 4-29 157-174 521-540 553-571 (STRAIN CHINA)PDPOL_HPBDU DNA POLYMERASE DUCK HEPATITIS B VIRUS 181-200 213-231PDPOL_HPBDW DNA POLYMERASE DUCK HEPATITIS B VIRUS (WHITE 4-29 157-174522-541 554-572 SHANGHAI DUCK ISOLATE S31) PDPOL_HPBGS DNA POLYMERASEGROUND SQUIRREL HEPATITIS 448-475 VIRUS PDPOL_HPBHE DNA POLYMERASE HERONHEPATITIS B VIRUS 4-29 554-572 PDPOL_HPBV2 DNA POLYMERASE HEPATITIS BVIRUS 412-439 447-463 763-780 (SUBTYPE ADW2) PDPOL_HPBV4 DNA POLYMERASEHEPATITIS B VIRUS 410-417 (SUBTYPE ADR4) PDPOL_HPBV9 DNA POLYMERASEHEPATITIS B VIRUS 412-439 447-463 763-780 (SUBTYPE ADW/STRAIN 991)PDPOL_HPBVA DNA POLYMERASE HEPATITIS B VIRUS 80-96 399-426 434-450750-767 (STRAIN ALPHA1) PDPOL_HPBVI DNA POLYMERASE HEPATITIS B VIRUS(SUBTYPE 80-96 410-437 445-468 761-778 ADW/STRAIN INDONESIA/ PIDW420)PDPOL_HPBVJ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 410-437445-468 761-778 ADW/STRAIN JAPAN/PJDW233) PDPOL_HPBVL DNA POLYMERASEHEPATITIS B VIRUS (STRAIN 80-96 399-426 434-457 750-767 LSH/CHIMPANZEEISOLATE) PDPOL_HPBVM DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96410-437 760-777 ADR/MUTANT) PDPOL_HPBVO DNA POLYMERASE HEPATITIS B VIRUS(SUBTYPE 80-96 410-437 445-468 761-778 ADW/STRAIN OKINAWA/ PODW282)PDPOL_HPBVP DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 412-439 447-463ADW/STRAIN PHILIPPINO/ PFDW294) PDPOL_HPBVR DNA POLYMERASE HEPATITIS BVIRUS (SUBTYPE 80-96 410-437 761-778 ADR) PDPOL_HPBVW DNA POLYMERASEHEPATITIS B VIRUS (SUBTYPE 82-98 405-432 440-456 ADW) PDPOL_HPBVY DNAPOLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 399-426 434-457 750-767 AYW)PDPOL_HPBVZ DNA POLYMERASE HEPATITIS B VIRUS (SUBTYPE 80-96 399-426434-457 ADYW) PDPOL_HSV11 DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817877-897 1073-1090 (TYPE 1/STRAIN 17) PDPOL_HSV1A DNA POLYMERASE HERPESSIMPLEX VIRUS 797-817 877-897 1073-1090 (TYPE 1/STRAIN ANGELOTTI)PDPOL_HSV1K DNA POLYMERASE HERPES SIMPLEX VIRUS 797-817 877-8971073-1090 (TYPE 1/STRAIN KOS) PDPOL_HSV1S DNA POLYMERASE HERPES SIMPLEXVIRUS 797-817 877-897 1073-1090 (TYPE 1/STRAIN SC16) PDPOL_HSV21 DNAPOLYMERASE HERPES SIMPLEX VIRUS 802-822 882-902 1078-1095 (TYPE 2/STRAIN186) PDPOL_HSV6U DNA POLYMERASE HERPES SIMPLEX VIRUS 652-672 786-803858-882 (TYPE 6/STRAIN UGANDA-1102) PDPOL_HSVEB DNA POLYMERASE EQUINEHERPESVIRUS TYPE 1 283-299 377-392 454-477 798-818 878-898 (STRAIN AB4P)PDPOL_HSVI1 DNA POLYMERASE ICTALURID HERPESVIRUS 1 257-275 397-418PDPOL_HSVSA DNA POLYMERASE HERPESVIRUS SAIMIRI 118-137 297-319 344-364514-532 955-972 (STRAIN 11) PDPOL_MCMVS DNA POLYMERASE MURINECYTOMEGALOVIRUS 303-322 535-553 780-802 (STRAIN SMITH) PDPOL_NPVAC DNAPOLYMERASE AUTOGRAPHA CALIFORNICA 518-536 676-697 NUCLEAR POLYHEDROSISVIRUS PDPOL_VARV DNA POLYMERASE VARIOLA VIRUS 421-437 PDPOL_VZVD DNAPOLYMERASE VARICELLA-ZOSTER VIRUS 312-331 363-382 440-463 713-740757-781 1006-1024 (STRAIN DUMAS) PDPOL_WHV1 DNA POLYMERASE WOODCHUCKHEPATITIS VIRUS 1 446-473 PDPOL_WHV59 DNA POLYMERASE WOODCHUCK HEPATITIS451-478 VIRUS 59 PDPOL_WHV7 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 7451-478 PDPOL_WHV8 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 450-477554-571 PDPOL_WHV8I DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 8 451-478PDPOL_WHVW6 DNA POLYMERASE WOODCHUCK HEPATITIS VIRUS 123-150 W64(ISOLATE PWS23) PDPOM_HPBVY DNA POLYMERASE HEPATITIS B VIRUS 399-426434-450 750-767 (SUBTYPE AYW) PDUT_HCMVA DUTPASE HUMAN CYTOMEGALOVIRUS107-126 (STAIN AD169) PDUT_HSVE4 DUTPASE EQUINE HERPESVIRUS TYPE 4130-154 (STRAIN 1942) PDUT_HSVEB DUTPASE EQUINE HERPESVIRUS TYPE 1130-149 (STRAIN AB4P) PDUT_HDVI1 DUTPASE ICTALURID HERPESVIRUS 1 72-95PDUT_HSVSA DUTPASE HERPESVIRUS SAIMIRI 22-45 79-104 168-183 (STRAIN 11)PE111_ADEM1 EARLY E1A 11 KD PROTEIN MOUSE ADENOVIRUS TYPE 1 24-47PE1A6_ADE07 EARLY E1A 6 3 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 8-35PE1A_ADE04 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 4 104-120PE1A_ADE07 EARLY E1A 28 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 8-35PE1A_ADES7 EARLY E1A 28 KD PROTEIN SIMIAN ADENOVIRUS TYPE 7 173-189238-254 PE1BL_ADE12 E1B PROTEIN, LARGE HUMAN ADENOVIRUS TYPE 12 451-467T-ANTIGEN PE1BL_ADEC2 E1B PROTEIN, LARGE CANINE ADENOVIRUS TYPE 2101-122 T-ANTIGEN PE1BL_ADENT EARLY E1B 44 KD PROTEIN TUPAIA ADENOVIRUS75-101 PE1BS_ADEC2 E1B PROTEIN, SMALL CANINE ADENOVIRUS TYPE 2 55-77T-ANTIGEN PE1BS_ADEM1 E1B PROTEIN, SMALL MOUSE ADENOVIRUS TYPE 1 118-138T-ANTIGEN PE310_ADE02 EARLY E3B 10 4 KD PROTEIN HUMAN ADENOVIRUS TYPE 23-21 34-60 PRECURSOR PE310_ADE05 EARLY E3B 10 4 KD PROTEIN HUMANADENOVIRUS TYPE 5 3-21 33-60 PRECURSOR PE310_ADE07 EARLY E3B 4 KDPROTEIN HUMAN ADENOVIRUS TYPE 7 3-24 PRECURSOR PE311_ADE02 EARLY E3A 116 KD HUMAN ADENOVIRUS TYPE 2 27-53 GLYCOPROTEIN PE311_ADE03 EARLY E3 9 0KD HUMAN ADENOVIRUS TYPE 3 19-45 GLYCOPROTEIN PE311_ADE05 EARLY E3A 10 5KD HUMAN ADENOVIRUS TYPE 5 20-46 GLYCOPROTEIN PE311_ADE07 EARLY E3 7 7KD PROTEIN HUMAN ADENOVIRUS TYPE 7 36-62 PE314_ADE05 EARLY E3 14 5 KDPROTEIN HUMAN ADENOVIRUS TYPE 5 108-125 PE315_ADE03 EARLY E3B 14 5 KDPROTEIN HUMAN ADENOVIRUS TYPE 3 52-72 PRECURSOR PE315_ADE07 EARLY E3B 149 KD PROTEIN HUMAN ADENOVIRUS TYPE 7 52-72 PRECURSOR PE316_ADE03 EARLYE3 16 KD HUMAN ADENOVIRUS TYPE 3 102-125 GLYCOPROTEIN PE321_ADE03 EARLYE3 20 5 KD HUMAN ADENOVIRUS TYPE 3 146-167 GLYCOPROTEIN PE321_ADE07EARLY E3 20 5 KD HUMAN ADENOVIRUS TYPE 7 146-167 GLYCOPROTEINPE322_ADEC1 EARLY E3 22 2 KD CANINE ADENOVIRUS TYPE 1 155-177GLYCOPROTEIN (STRAIN GLAXO) PE3GL_ADEM1 EARLY E3 17 7 KD MOUSEADENOVIRUS TYPE 1 105-127 GLYCOPROTEIN PE411_ADE02 PROBABLE EARLY E4 11KD HUMAN ADENOVIRUS TYPE 2 56-77 PROTEIN PE411_ADE05 PROBABLE EARLY E411 KD HUMAN ADENOVIRUS TYPE 5 56-77 PROTEIN PE433_ADEM1 PROBABLE EARLYE4 33 KD MOUSE ADENOVIRUS TYPE 1 61-80 PROTEIN PE434_ADE02 EARLY E4 34KD PROTEIN HUMAN ADENOVIRUS TYPE 2 80-106 PEAD_EBV EARLY ANTIGEN PROTEIND EPSTEIN-BARR VIRUS 263-286 (STRAIN B95-8) PEAR_EBV EARLY ANTIGENPROTEIN R EPSTEIN-BARR VIRUS 159-184 (STRAIN B95-8) PEBN2_EBV EBNA-2NUCLEAR PROTEIN EPSTEIN-BARR VIRUS 126-141 (STRAIN B95-8) PEBN3_EBVEBNA-3 NUCLEAR PROTEIN EPSTEIN-BARR VIRUS 113-131 662-683 (STRAIN B95-8)PEFT1_VARV EARLY TRANSCRIPTION VARIOLA VIRUS 21-41 FACTOR 70 KD SUBUNITPENV1_FRSFV ENV POLYPROTEIN FRIEND SPLEEN FOCUS-FORMIMG 380-407PRECURSOR VIRUS PENV2_FRSFV ENV POLYPROTEIN FRIEND SPLEEN FOCUS-FORMING380-407 PRECURSOR VIRUS PENV_AVIR3 ENV POLYPROTEIN AVIAN RETROVIRUSRPL30 206-225 PENV_AVISU COAT PROTEIN GP37 AVIAN SARCOMA VIRUS 98-117(STRAIN UR2) PENV_BAEVM ENV POLYPROTEIN BABOON ENDOGENOUS VIRUS 170-190202-224 (STRAIN M7) PENV_BIV06 ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY47-68 178-201 434-450 525-546 PRECURSOR VIRUS (ISOLATE 106) PENV_BIV27ENV POLYPROTEIN BOVINE IMMUNODEFICIENCY 47-68 147-168 207-230 463-479554-575 PRECURSOR VIRUS (ISOLATE 127) PENV_BLVAF ENV POLYPROTEIN BOVINELEUKEMIA VIRUS 303-327 (AMERICAN ISOLATE FLK) PENV_BLVAU ENV POLYPROTEINBOVINE LEUKEMIA VIRUS 303-327 (AUSTRALIAN ISOLATE) PENV_BLVAV ENVPOLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (AMERICAN ISOLATE VDM)PENV_BLVB2 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327 (BELGIUMISOLATE LB285) PENV_BLVB5 ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS 303-327(BELGIUM ISOLATE LB59) PENV_BLVJ ENV POLYPROTEIN BOVINE LEUKEMIA VIRUS303-327 (JAPANESE ISOLATE BLV-1) PENV_FENV1 ENV POLYPROTEIN FELINEENDOGENOUS VIRUS 30-47 225-246 630-651 PRECURSOR ECE1 PENV_FIVPE ENVPOLYPROTEIN FELINE ENDOGENOUS VIRUS 30-47 225-246 630-651 PRECURSOR ECE1PENV_FLVC6 ENV POLYPROTEIN FELINE LEUKEMIA PROVIRUS 38-55 624-645PRECURSOR (CLONE CFE-6) PENV_FLVGL ENV POLYPROTEIN FELINE LEUKEMIA VIRUS9-29 447-468 605-626 PRECURSOR (STRAIN A/GLASGOW-1) PENV_FLVLB ENVPOLYPROTEIN FELINE LEUKEMIA VIRUS 467-488 625-646 PRECURSOR (STRAINLAMBDA-B1) PENV_FLVSA ENV POLYPROTEIN FELINE LEUKEMIA VIRUS 444-465602-623 PRECURSOR (STRAIN SARMA) PENV_FOAMV ENV POLYPROTEIN HUMANSPUMARETROVIRUS 153-174 255-275 300-325 481-496 710-727 864-887 924-951957-978 (FOAMY VIRUS) PENV_FSVGA ENV POLYPROTEIN FELINE SARCOMA VIRUS467-488 625-646 PRECURSOR (STRAIN GARDNER-ARNSTEIN) PENV_FSVGB ENVPOLYPROTEIN FELINE SARCOMA VIRUS 447-468 605-626 PRECURSOR (STRAIN GA)PENV_FSVSM ENV POLYPROTEIN FELINE SARCOMA VIRUS 450-471 608-629PRECURSOR (STRAIN SM) PENV_FSVST ENV POLYPROTEIN FELINE SARCOMA VIRUS467-488 PRECURSOR (STRAIN SNYDER-THEILEN) PENV_GALV ENV POLYPROTEINGIBBON APE LEUKEMIA VIRUS 519-540 PRECURSOR PENV_HV1B1 GP160 PRECURSORHUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (BH10 ISOLATE) PENV_HV1B8GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 493-515 VIRUS TYPE 1 (BH8ISOLATE) PENV_HV1BN GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 494-516 VIRUSTYPE 1 (BRAIN ISOLATE) PENV_HV1BR GP160 PRECURSOR HUMAN IMMUNODEFICIENCY503-525 VIRUS TYPE 1 (BRU ISOLATE) PENV_HV1C4 GP160 PRECURSOR HUMANIMMUNODEFICIENCY 428-448 VIRUS TYPE 1 (CDC-451 ISOLATE) PENV_HV1EL GP160PRECURSOR HUMAN IMMUNODEFICIENCY 495-517 VIRUS TYPE 1 (ELI ISOLATE)PENV_HV1H2 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1(HXB2 ISOLATE) PENV_HV1H3 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 498-520VIRUS TYPE 1 (HXB3 ISOLATE) PENV_HV1J3 GP160 PRECURSOR HUMANIMMUNODEFICIENCY 510-532 VIRUS TYPE 1 (JH3 ISOLATE) PENV_HV1JR GP160PRECURSOR HUMAN IMMUNODEFICIENCY 490-512 VIRUS TYPE 1 (JRCSF ISOLATE)PENV_HV1KB GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 504-526 552-579752-768 VIRUS TYPE 1 (STRAIN KB-1-GP32) PENV_HV1MA GP160 PRECURSOR HUMANIMMUNODEFICIENCY 500-522 VIRUS TYPE 1 (MAL ISOLATE) PENV_HV1MF GP160PRECURSOR HUMAN IMMUNODEFICIENCY 496-518 VIRUS TYPE 1 (MFA ISOLATE)PENV_HV1N5 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 178-203 VIRUS TYPE 1(NEW YORK-5 ISOLATE) PENV_HV1ND GP160 PRECURSOR HUMAN IMMUNODEFICIENCY488-510 VIRUS TYPE 1 (NDK ISOLATE) PENV_HV1OY GP160 PRECURSOR HUMANIMMUNODEFICIENCY 123-140 VIRUS TYPE 1 (OYI ISOLATE) PENV_HV1PV GP160PRECURSOR HUMAN IMMUNODEFICIENCY 498-520 VIRUS TYPE 1 (PV22 ISOLATE)PENV_HV1RH GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 445-460 VIRUS TYPE 1(RF/HAT ISOLATE) PENV_HV1S1 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY489-511 738-754 VIRUS TYPE 1 (SF162 ISOLATE) PENV_HV1S3 GP160 PRECURSORHUMAN IMMUNODEFICIENCY 300-322 VIRUS TYPE 1 (SF33 ISOLATE) PENV_HV122GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 123-145 410-427 495-517 VIRUSTYPE 1 (Z2/CDC-Z34 ISOLATE) PENV_HV1Z3 GP160 PRECURSOR HUMANIMMUNODEFICIENCY 117-133 175-198 VIRUS TYPE 1 (ZAIRE 3 ISOLATE)PENV_HV1Z6 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 497-519 VIRUS TYPE 1(ZAIRE 6 ISOLATE) PENV_HV1Z8 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY505-527 VIRUS TYPE 1 (Z-84 ISOLATE) PENV_HV1ZH GP160 PRECURSOR HUMANIMMUNODEFICIENCY 123-142 438-453 498-520 VIRUS TYPE 1 (ZAIRE HZ321ISOLATE) PENV_HV2BE GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 3-26 750-775781-804 VIRUS TYPE 2 (ISOLATE BEN) PENV_HV2CA GP160 PRECURSOR HUMANIMMUNODEFICIENCY 750-777 VIRUS TYPE 2 (ISOLATE CAM2) PENV_HV2D1 GP160PRECURSOR HUMAN IMMUNODEFICIENCY 3-26 741-766 772-795 VIRUS TYPE 2(ISOLATE D194) PENV_HV2D2 GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 9-28VIRUS TYPE 2 (ISOLATE D205.7) PENV_HV2G1 GP160 PRECURSOR HUMANIMMUNODEFICIENCY 741-766 772-795 VIRUS TYPE 2 (ISOLATE GHANA-1)PENV_HV2NZ GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 742-767 777-800 VIRUSTYPE 2 (ISOLATE NIH-Z) PENV_HV2RO GP160 PRECURSOR HUMAN IMMUNODEFICIENCY751-776 VIRUS TYPE 2 (ISOLATE ROD) PENV_HV2SB GP160 PRECURSOR HUMANIMMUNODEFICIENCY 743-768 778-804 VIRUS TYPE 2 (ISOLATE SBLISY)PENV_HV2ST GP160 PRECURSOR HUMAN IMMUNODEFICIENCY 745-770 VIRUS TYPE 2(ISOLATE ST) PENV_JSRV ENV POLYPROTEIN SHEEP PULMONARY 104-119 299-325376-398 541-564 PRECURSOR ADENOMATOSIS VIRUS PENV_MCFF ENV POLYPROTEINMINK CELL FOCUS-FORMING 600-621 PRECURSOR MURINE LEUKEMIA VIRUSPENV_MCFF3 ENV POLYPROTEIN MINK CELL FOCUS-FORMING 601-622 PRECURSORMURINE LEUKEMIA VIRUS (ISOLATE CI- PENV_MLVAV ENV POLYPROTEIN AKV MURINELEUKEMIA VIRUS 630-651 PRECURSOR PENV_MLVCB ENV POLYPROTEIN CAS-BR-EMURINE LEUKEMIA 625-646 PRECURSOR VIRUS PENV_MLVF5 ENV POLYPROTEINFRIEND MURINE LEUKEMIA 639-660 PRECURSOR VIRUS (ISOLATE 57) PENV_MLVFFENV POLYPROTEIN FRIEND MURINE LEUKEMIA 639-660 PRECURSOR VIRUS (ISOLATEFB29) PENV_MLVFP ENV POLYPROTEIN FRIEND MURINE LEUKEMIA 639-660PRECURSOR VIRUS (ISOLATE PVC-211) PENV_MLVHO ENV POLYPROTEIN HOMULVMURINE LEUKEMIA 626-647 PRECURSOR VIRUS (MUS HORTULANUS VIRUS)PENV_MLVKI ENV POLYPROTEIN KRISTEN MURINE LEUKEMIA 167-188 VIRUSPENV_MLVMO ENV POLYPROTEIN MOLONEY MURINE LEUKEMIA 629-650 PRECURSORVIRUS PENV_MLVRD ENV POLYPROTEIN RADIATION MURINE LEUKEMIA 624-645PRECURSOR VIRUS PENV_MLVRK ENV POLYPROTEIN RADIATION MURINE LEUKEMIA624-645 PRECURSOR VIRUS (STRAIN KAPLAN) PENV_MMTVB ENV POLYPROTEIN MOUSEMAMMARY TUMOR 643-663 VIRUS (STRAIN BR6) PENV_MMTVG ENV POLYPROTEINMOUSE MAMMARY TUMOR 643-663 VIRUS (STRAIN GR) PENV_MPMV ENV POLYPROTEINSIMIAN MASON-PFIZER VIRUS 213-235 PENV_MSVFB ENV POLYPROTEIN FBJ MURINEOSTEOSARCOMA 170-191 VIRUS PENV_OMVVS ENV POLYPROTEIN OVINE LENTIVIRUS658-683 PRECURSOR (STRAIN SA-OMVV) PENV_RMCFV ENV POLYPROTEIN RAUSCHERMINK CELL 603-624 PRECURSOR FOCUS-INDUCING VIRUS PENV_RSVP ENVPOLYPROTEIN ROUS SARCOMA VIRUS 42-69 533-552 (STRAIN PRAGUE C) PENV_SFV1ENV POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 300-325 710-727 864-887924-951 957-978 PENV_SFV3L ENV POLYPROTEIN SIMIAN FOAMY VIRUS 157-178304-329 707-724 861-884 921-948 954-975 (TYPE 3/STRAIN LK3) PENV_SIVA1GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 437-458 VIRUS (AGM155 ISOLATE)PENV_SIVAG GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 442-463 VIRUS (AGM3ISOLATE) PENV_SIVA1 GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 421-442VIRUS (ISOLATE AGM/CLONE GRI-1) PENV_SIVAT GP160 PRECURSOR SIMIANIMMUNODEFICIENCY 435-456 VIRUS (TYO-1 ISOLATE) PENV_SIVGB GP160PRECURSOR SIMIAN IMMUNODEFICIENCY 93-109 VIRUS (ISOLATE GB1) PENV_SIVM1GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 766-793 803-826 VIRUS (MM142-83ISOLATE) PENV_SIVMK GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 139-154765-792 802-825 VIRUS (K6W ISOLATE) PENV_SIVML GP160 PRECURSOR SIMIANIMMUNODEFICIENCY 139-154 764-791 801-824 VIRUS (K78 ISOLATE) PENV_SIVS4GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 769-789 806-829 VIRUS (F236/SMH4ISOLATE) PENV_SIVSP GP160 PRECURSOR SIMIAN IMMUNODEFICIENCY 773-793810-833 VIRUS (BPJ/BC13 ISOLATE) PENV_SMSAV P15E PROTEIN SIMIAN SARCOMAVIRUS 42-63 PENV_SRV1 ENV POLYPROTEIN SIMIAN RETROVIRUS SRV-1 213-235PERBA_AVIER ERBA ONCOGENE PROTEIN AVIAN ERYTHROBLASTOSIS 227-249 VIRUS(STRAIN ES4) PETF1_FOWP1 EARLY TRANSCRIPTION FOWLPOX VIRUS (STRAIN FP-1)21-41 73-92 FACTOR PETF1_SFVKA EARLY TRANSCRIPTION SHOPE FIBROMA VIRUS21-41 FACTOR (STRAIN KASZA) PETF1_VACCC EARLY TRANSCRIPTION VACCINIAVIRUS (STRAIN 21-41 FACTOR COPENHAGEN) PETF1_VACCV EARLY TRANSCRIPTIONVACCINIA VIRUS (STRAIN WR) 21-41 FACTOR PETF2_VACCC EARLY TRANSCRIPTIONVACCINIA VIRUS (STRAIN 50-73 101-117 165-187 285-308 558-582 FACTOR 82KD SUBUNIT COPENHAGEN) PETF2_VACCV EARLY TRANSCRIPTION VACCINIA VIRUS(STRAIN WR) 48-72 FACTOR 82 KD SUBUNIT PETF2_VARV EARLY TRANSCRIPTIONVARIOLA VIRUS 50-73 101-117 165-187 285-308 558-582 FACTOR 82 KD SUBUNITPEXON_HSV11 ALKALINE EXONUCLEASE HERPES SIMPLEX VIRUS 165-180 (TYPE1/STRAIN 17) PEXON_HSV2 ALKALINE EXONUCLEASE HERPES SIMPLEX VIRUS (TYPE2) 155-170 PEXON_HSVEB ALKALINE EXONUCLEASE EQUINE HERPES VIRUS TYPE 1276-291 (STRAIN AB4P) PEXON_PRVN3 ALKALINE EXONUCLEASE PSEUDORABIESVIRUS 36-51 (STRAIN NIA-3) PEXON_VZVD ALKALINE EXONUCLEASEVARICELLA-ZOSTER VIRUS 28-44 217-262 (STRAIN DUMAS) PFIB2_ADE40 41 4 KDFIBER PROTEIN HUMAN ADENOVIRUS TYPE 40 116-133 PFIB2_ADE41 41 4 KD FIBERPROTEIN HUMAN ADENOVIRUS TYPE 41 116-133 PFIBP_ADE03 FIBER PROTEIN HUMANADENOVIRUS TYPE 3 152-173 PFIBP_ADE05 FIBER PROTEIN HUMAN ADENOVIRUSTYPE 5 447-473 PFIBP_ADEB3 FIBER PROTEIN BOVINE ADENOVIRUS TYPE 3347-372 775-801 (MASTADENOVIRUS BOS3) PFIBP_ADEC1 FIBER PROTEIN CANINEADENOVIRUS TYPE 1 382-397 (STRAIN GLAXO) PFIBP_ADEM1 FIBER PROTEIN MOUSEADENOVIRUS TYPE 1 191-215 227-252 493-513 548-571 579-599 PGAG_AVEV1 GAGPOLYPROTEIN AVIAN ENDOGENOUS VIRUS EV-1 53-78 PGAG_AVEV2 GAG POLYPROTEINAVIAN ENDOGENOUS 2-27 ROUS-ASSOCIATED VIRUS-0 PGAG_AVIMC GAG POLYPROTEINAVIAN MYELOCYTOMATOSIS 53-78 VIRUS MC29 PGAG_AVIMD GAG POLYPROTEIN AVIANMYELOCTYOMATOSIS 53-78 VIRUS HB1 PGAG_AVISU CORE PROTEIN P19 AVIANSARCOMA VIRUS 53-78 (STRAIN UR2) PGAG_AVISY GAG POLYPROTEIN AVIANSARCOMA VIRUS 53-78 (STRAIN Y73) PGAG_BAEVM GAG POLYPROTEIN BABOONENDOGENOUS VIRUS 397-422 (STRAIN M7) PGAG_BLVAU GAG POLYPROTEIN BOVINELEUKEMIA VIRUS 212-238 (AUSTRALIAN ISOLATE) PGAG_BLVJ GAG POLYPROTEINBOVINE LEUKEMIA VIRUS 213-239 (JAPANESE ISOLATE BLV-1) PGAG_CAEVC GAGPOLYPROTEIN CAPRINE ARTHRITIS 102-119 ENCEPHALITIS VIRUS (STRAIN CORK)PGAG_FUJSV GAG POLYPROTEIN FUJINAMI SARCOMA VIRUS 53-78 PGAG_HTL1A GAGPOLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77-94 TYPE 1 (STRAIN ATK)PGAG_HTL1C GAG POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 77-94 TYPE 1(CARIBBEAN ISOLATE) PGAG_HTL1M GAG POLYPROTEIN HUMAN T-CELL LEUKEMIAVIRUS 77-94 TYPE 1 (ISOLATE MT-2) PGAG_HV1A2 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PGAG_HV1B1 GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (BH10 ISOLATE)PGAG_HV1B5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1(BH5 ISOLATE) PGAG_HV1BR GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91VIRUS TYPE 1 (BRU ISOLATE) PGAG_HV1C4 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (CDC-451 ISOLATE) PGAG_HV1EL GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (ELI ISOLATE)PGAG_HV1H2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1(HXB2 ISOLATE) PGAG_HV1J3 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91VIRUS TYPE 1 (JH3 ISOLATE) PGAG_HV1JR GAG POLYPROTEIN HUMANIMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (JRCSF ISOLATE) PGAG_HV1MA GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY 262-285 VIRUS TYPE 1 (MAL ISOLATE)PGAG_HV1MN GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (MNISOLATE) PGAG_HV1N5 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUSTYPE 1 (NEW YORK-5 ISOLATE) PGAG_HV1ND GAG POLYPROTEIN HUMANIMMUNODEFICIENCY 65-91 352-373 VIRUS TYPE 1 (NDK ISOLATE) PGAG_HV1OY GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (OY1 ISOLATE)PGAG_HV1PV GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1(PV22 ISOLATE) PGAG_HV1RH GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91VIRUS TYPE 1 (RF/HAT ISOLATE) PGAG_HV1U4 GAG POLYPROTEIN HUMANIMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (STRAIN UGANDAN/ISO) PGAG_HV1W2 GAGPOLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1 (WMJ2 ISOLATE)PGAG_HV1Z2 GAG POLYPROTEIN HUMAN IMMUNODEFICIENCY 65-91 VIRUS TYPE 1(Z2/CDC-Z34 ISOLATE) PGAG_IPMA RETROVIRUS-RELATED GAG MOUSEINTRACISTERNAL 757-772 POLYPROTEIN A-PARTICLE PGAG_MMTVB GAG POLYPROTEINMOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN BR6) PGAG_MMTVC GAG POLYPROTEINMOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN C3H) PGAG_MMTVG GAG POLYPROTEINMOUSE MAMMARY TUMOR 82-97 VIRUS (STRAIN GR) PGAG_RSVP GAG POLYPROTEINROUS SARCOMA VIRUS 53-78 (STRAIN PRAGUE C) PGAG_SCVLA MAJOR COAT PROTEINSACCAROMYCES CEREVISIAE 618-645 VIRUS L-A PGAG_SFV1 GAG POLYPROTEINSIMIAN FOAMY VIRUS (TYPE 1) 85-103 PGAG_SFV3L GAG POLYPROTEIN SIMIANFOAMY VIRUS 83-101 (TYPE 3/STRAIN LK3) PGAG_SIVA1 GAG POLYPROTEIN SIMIANIMMUNODEFICIENCY 189-213 VIRUS (AGM155 ISOLATE) PGAG_SIVAG GAGPOLYPROTEIN SIMIAN IMMUNODIFICIENCY 193-217 VIRUS (AGM3 ISOLATE)PGAG_SIVAT GAG POLYPROTEIN SIMIAN IMMUNODEFICIENCY 189-213 VIRUS (TYO-1ISOLATE) PGAG_SIVCZ GAG POLYPROTEIN CHIMPANZEE 66-92 IMMUNODEFICIENCYVIRUS (SIV(CPZ)) PGAG_SIVGB GAG POLYPROTEIN SIMIAN IMMUNODIFICIENCY66-92 VIRUS (ISOLATE GB1) PGAG_SIVM1 GAG POLYPROTEIN SIMIANIMMUNODEFCICENCY VIRUS (MM142-83 ISOLATE) PGAG_SMRVH GAG POLYPROTEINSQUIRREL MONKEY RETROVIRUS 286-307 (SMRV-H) PGLRX_VACCC POSSIBLEGLUTAREDOXIN VACCINIA VIRUS (STRAIN 71-87 COPENHAGEN), AND (STRAINL-1VP) PGLRX_VARV POSSIBLE GLUTAREDOXIN VARIOLA VIRUS 71-87 PGRAN_GVASGRANULIN AGROTIS SEGETUM GRANULOSIS 208-226 VIRUS PGRAN_GVTN GRANULINTRICHOPLUSIA NI GRANULOSIS 209-227 VIRUS PGRFA_VACCC GROWTH FACTORVACCINIA VIRUS (STRAIN 104-124 COPENHAGEN) PGRFA_VACCV GROWTH FACTORVACCINIA VIRUS (STRAIN WR) 104-123 PGRFA_VARV GROWTH FACTOR VARIOLAVIRUS 104-122 PHELI_EBV PROBABLE HELICASE EPSTEIN-BARR VIRUS 180-207338-361 438-464 (STRAIN B95-8) PHELI_HCMVA PROBABLE HELICASE HUMANCYTOMEGALOVIRUS 397-420 539-560 826-852 (STRAIN AD169) PHELI_HSV11PROBABLE HELICASE HERPES SIMPLEX VIRUS 389-408 628-646 (TYPE 1/STRAIN17) PHELI_HSV2H PROBABLE HELICASE HERPES SIMPLEX VIRUS 290-309 529-554(TYPE 2/STRAIN HG52) PHELI_HSVEB PROBABLE HELICASE EQUINE HERPESVIRUSTYPE 1 181-204 243-266 394-413 (STRAIN AB4P) PHELI_HSVSA PROBABLEHELICASE HERPESVIRUS SAIMIRI 327-350 389-411 658-683 (STRAIN 11)PHELI_VZVD PROBABLE HELICASE VARICELLA-ZOSTER VIRUS 165-189 383-402561-578 761-786 (STRAIN DUMAS) PHEMA_CDVO HEMAGGLUTININ- CANINEDISTEMPER VIRUS 36-53 200-223 NEURAMINIDASE (STRAIN ONDERSTEPOORT)PHEMA_CVBF HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS 391-415 PRECURSOR(STRAIN F15) PHEMA_CVBLY HEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS391-415 PRECURSOR (STRAIN LY-138) PHEMA_CVBM HEMAGGLUTININ-ESTERASEBOVINE CORONAVIRUS 391-415 PRECURSOR (STRAIN MEBUS) PHEMA_CVBQHEMAGGLUTININ-ESTERASE BOVINE CORONAVIRUS (STRAIN 391-415 PRECURSORQUEBEC), AND (STRAIN L9) PHEMA_CVHOC HEMAGGLUTININ-ESTERASE HUMANCORONAVIRUS 391-415 PRECURSOR (STRAIN OC43) PHEMA_CVMA5HEMAGGLUTININ-ESTERASE MURINE CORONAVIRUS MHV 402-423 PRECURSOR (STRAINA59) PHEMA_CVMS HEMAGGLUTININ-ESTERASE MURINE CORONAVIRUS MHZ 403-418PRECURSOR (STRAIN S) PHEMA_IAAIC HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN37-59 322-339 PRECURSOR A/AICHI/2/68) PHEMA_IABAN HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/BANGKOK/1/79)PHEMA_IABUD HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSORA/BUDGERIGAR/HOKKAIDO/1/77) PHEMA_IACKA HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 320-337 PRECURSOR A/CHICKEN/ALABAMA/1/75) PHEMA_IACKGHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 81-101 231-247 316-333 PRECURSORA/CHICKEN/GERMANY/N/49) PHEMA_ICAKP HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 302-319 PRECURSOR A/CHICKEN/PENNSYLVANIA/1/83) PHEMA_IACKQHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 302-319 PRECURSORA/CHICKEN/PENNSYLVANIA/ 1370/83) PHEMA_IACKS HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 319-336 PRECURSOR A/CHICKEN/SCOTLAND/59) PHEMA_IACKVHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/CHICKEN/VICTORIA/1/85) PHEMA_IADA1 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 320-337 PRECURSOR A/DUCK/ALBERTA/28/76) PHEMA_IADA3HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSORA/DUCK/ALBERTA/78/76) PHEMA_IADCZ HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 320-337 PRECURSOR A/DUCK/CZECHOSLOVAKIA/56) PHEMA_IADE1HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 266-287 319-336 PRECURSORA/DUCK/ENGLAND/1/56) PHEMA_IADH1 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN306-323 PRECURSOR A/DUCK/HOKKAIDO/5/77) PHEMA_IADH2 HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/8/80)PHEMA_IADH3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323PRECURSOR A/DUCK/HOKKAIDO/33/80) PHEMA_IADH4 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/7/82) PHEMA_IADH5HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 215-237 PRECURSORA/DUCK/HOKKAIDO/21/82) PHEMA_IADH6 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 21-43 306-323 PRECURSOR A/DUCK/HOKKAIDO/9/85) PHEMA_IADH7HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSORA/DUCK/HOKKAIDO/10/85) PHEMA_IADM2 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 37-59 322-339 PRECURSOR A/DUCK/MEMPHIS/928/74) PHEMA_IADMAHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 28-50 81-101 PRECURSORA/DUCK/MANITOBA/1/53) PHEMA_IADNZ HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 320-337 PRECURSOR A/DUCK/NEW ZEALAND/31/76) PHEMA_IADU3HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSORA/DUCK/UKRAINE/1/63) PHEMA_IAEN6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN21-43 306-323 A/ENGLAND/878/69) PHEMA_IAEN7 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 37-59 322-339 PRECURSOR A/ENGLAND/321/77) PHEMA_IAFPRHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSOR A/FOWLPLAGUE VIRUS/ ROSTOCK/34) PHEMA_IAGRE HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 320-337 PRECURSOR A/GREY TEAL/AUSTRALIA/2/79) PHEMA_IAGU2HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSORA/GULL/MARYLAND/704/77) PHEMA_IAGUA HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 319-336 PRECURSOR A/GULL/ASTRAKHAN/227/84) PHEMA_IAHALHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 321-338 PRECURSORA/EQUINE/ALGIERS/72) PHEMA_IAHC6 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN230-246 315-332 PRECURSOR A/EQUINE/CAMBRIDGE/1/63) PHEMA_IAHC7HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/EQUINE/CAMBRIDGE/1/73) PHEMA_IAHCD HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 230-246 315-332 PRECURSOR A/EQUINE/C DETROIT/1/64) PHEMA_IAHDEHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/EQUINE/DETROIT/1/64) PHEMA_IAHFO HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 236-252 321-338 PRECURSOR A/EQUINE/FONTAINEBLEAU/76) PHEMA_IAHK6HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 321-338 PRECURSORA/EQUINE/KENTUCKY/2/86) PHEMA_IAHK7 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 236-252 321-338 PRECURSOR A/EQUINE/KENTUCKY/1/87) PHEMA_IAHLEHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/EQUINE/LEXINGTON/1/66) PHEMA_IAHLO HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 230-246 315-332 PRECURSOR A/EQUINE/LONDON/1416/73) PHEMA_IAHMIHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSORA/EQUINE/MIAMI/1/63) PHEMA_IAHNM HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN236-252 321-338 PRECURSOR A/EQUINE/NEW MARKET/76) PHEMA_IAHNNHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 315-332 PRECURSOR A/EQUINE/NEWMARKET/1/77) PHEMA_IAHPR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 315-332PRECURSOR A/EQUINE/PRAGUE/1/56) PHEMA_IAHRO HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 236-252 321-338 PRECURSOR A/EQUINE/ROMANIA/80) PHEMA_IAHSAHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSORA/EQUINE/SANTIAGO/1/85) PHEMA_IAHSP HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 230-246 315-332 PRECURSOR A/EQUINE/SAO PAULO/1/76) PHEMA_IAHSWHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/EQUINE/SWITZERLAND/137/72) PHEMA_IAHTE HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 236-252 321-338 PRECURSOR A/EQUINE/TENNESSEE/5/86) PHEMA_IAHTOHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 236-252 321-338 PRECURSORA/EQUINE/TOKYO/71) PHEMA_IAHUR HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN236-252 321-338 PRECURSOR A/EQUINE/URUGUAY/1/63) PHEMA_IAJAPHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 317-334 PRECURSORA/JAPAN/305/57) PHEMA_IAMAA HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN197-223 319-336 PRECURSOR A/MALLARD/ASTRAKHAN/244/82) PHEMA_IAMABHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 202-228 324-341 PRECURSORA/MALLARD/ASTRAKHAN/263/82) PHEMA_IAMAO HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 37-59 322-339 PRECURSOR A/MALLARD/NEW YORK/6874/78) PHEMA_IAME1HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339 PRECURSORA/MEMPHIS/1/71) PHEMA_IAME2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN37-59 322-339 PRECURSOR A/MEMPHIS/102/72) PHEMA_IAME6 HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 21-43 306-323 PRECURSOR A/MEMPHIS/6/86)PHEMA_IAMIN HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 85-101 231-247316-333 PRECURSOR A/MINK/SWEDEN/84) PHEMA_IANT6 HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 37-59 322-339 PRECURSOR A/NT/60/68) PHEMA_IAPILHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSOR A/PILOTWHALE/MAINE/328/84) PHEMA_IAQU7 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN21-43 306-323 PRECURSOR A/QU/T/70) PHEMA_IARUD HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 320-337 PRECURSOR A/RUDDY TURNSTONE/ NEW JERSEY/47)PHEMA_IASE2 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 320-337 PRECURSORA/SEAL/MASSACHUSETTS/133/82) PHEMA_IASH2 HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 234-250 321-338 PRECURSOR A/SHEARWATER/AUSTRALIA/72) PHEMA_IASTAHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 230-246 315-332 PRECURSORA/STARLING/VICTORIA/5156/85) PHEMA_IATKM HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 33-55 320-337 PRECURSOR A/TURKEY/MINNESOTA/833/80) PHEMA_IATKOHEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 233-249 PRECURSORA/TURKEY/ONTARIO/7732/66) PHEMA_IATKR HEMAGGLUTININ INFLUENZA A VIRUS(STRAIN 230-246 PRECURSOR A/TURKEY/OREGON/71) PHEMA_IATKW HEMAGGLUTINININFLUENZA A VIRUS (STRAIN 229-245 PRECURSOR A/TURKEY/WISCONSIN/1/66)PHEMA_IAUDO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339380-397 PRECURSOR A/UDORN/307/72) PHEMA_IAVI7 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 38-60 323-340 PRECURSOR A/VICTORIA/3/75) PHEMA_IAX31HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 PRECURSOR X-31)PHEMA_IAZCO HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 37-59 322-339PRECURSOR A/SWINE/COLORADO/1/77) PHEMA_IAZH2 HEMAGGLUTININ INFLUENZA AVIRUS (STRAIN 21-43 306-323 PRECURSOR A/SWINE/HONG KONG/81/78)PHEMA_IAZH3 HEMAGGLUTININ INFLUENZA A VIRUS (STRAIN 21-43 306-323PRECURSOR A/SWINE/HONG KONG/126/82) PHEMA_IAZUK HEMAGGLUTININ INFLUENZAA VIRUS (STRAIN 37-59 322-339 PRECURSOR A/SWINE/UKKEL/1/84) PHEMA_INBAAHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 115-131 295-310 PRECURSOR B/ANNARBOR/1/86) PHEMA_INBBE HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139303-318 PRECURSOR B/BEIJING/1/87) PHEMA_INBBO HEMAGGLUTININ INFLUENZA BVIRUS (STRAIN 116-132 293-308 PRECURSOR B/BONN/43) PHEMA_INBENHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 301-316 PRECURSORB/ENGLAND/222/82) PHEMA_INBFU HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN108-124 286-301 B/FUKUOKA/80/81) PHEMA_INBGL HEMAGGLUTININ INFLUENZA BVIRUS (STRAIN 119-135 296-311 PRECURSOR B/GL/54) PHEMA_INBHKHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 116-132 293-308 PRECURSOR B/HONGKONG/8/73) PHEMA_INBIB HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108-124288-303 B/IBARAKI/2/85) PHEMA_INBID HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 120-136 299-314 PRECURSOR B/ID/86) PHEMA_INBLE HEMAGGLUTINININFLUENZA B VIRUS (STRAIN 123-139 302-317 PRECURSOR B/LEE/40)PHEMA_INBMD HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 113-129 292-307PRECURSOR B/MARYLAND/59) PHEMA_INBME HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 116-132 296-311 PRECURSOR B/MEMPHIS/6/86) PHEMA_INBNAHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 108-124 288-303 B/NAGASAKI/1/87)PHEMA_INBOR HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 301-316PRECURSOR B/OREGON/5/80) PHEMA_INBSI HEMAGGLUTININ INFLUENZA B VIRUS(STRAIN 123-139 301-316 PRECURSOR B/SINGAPORE/222/79) PHEMA_INBSJHEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 119-135 298-313 PRECURSORB/SINGAPORE/64) PHEMA_INBUS HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN116-132 294-309 PRECURSOR B/USSR/100/83) PHEMA_INBVI HEMAGGLUTINININFLUENZA B VIRUS (STRAIN 116-132 296-311 PRECURSOR B/VICTORIA/3/85)PHEMA_INBVK HEMAGGLUTININ INFLUENZA B VIRUS (STRAIN 123-139 303-318PRECURSOR B/VICTORIA/2/87) PHEMA_INBYB HEMAGGLUTINI INFLUENZA B VIRUS(STRAIN 108-124 286-301 B/YAMAGATA/16/88) PHEMA_INCCA HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 442-466 PRECURSOR C/CALIFORNIA/78) PHEMA_INCENHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSORC/ENGLAND/892/83) PHEMA_INCGL HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN430-454 PRECURSOR C/GREAT LAKES/1167/54) PHEMA_INCHY HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 429-453 C/HYOGO/1/83) PHEMA_INCJHHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 443-467 PRECURSORC/JOHANNESBURG/1/66) PHEMA_INCKY HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN429-453 C/KYOTO/41/82) PHEMA_INCMI HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 429-453 PRECURSOR C/MISSISSIPPI/80) PHEMA_INCNA HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 429-453 C/NARA/82) PHEMA_INCP1 HEMAGGLUTINININFLUENZA C VIRUS (STRAIN 430-454 PRECURSOR C/PIG/BEIJING/10/81)PHEMA_INCP2 HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSORC/PIG/BEIJING/115/81) PHEMA_INCP3 HEMAGGLUTININ INFLUENZA C VIRUS(STRAIN 430-454 PRECURSOR C/PIG/BEIJING/439/82) PHEMA_INCTAHEMAGGLUTININ INFLUENZA C VIRUS (STRAIN 430-454 PRECURSORC/TAYLOR/1233/47) PHEMA_INCYA HEMAGGLUTININ INFLUENZA C VIRUS (STRAIN430-454 PRECURSOR C/YAMAGATA/10/81) PHEMA_MUMP1 HEMAGGLUTININ- MUMPSVIRUS (STRAIN SBL-1) 101-125 133-148 225-246 367-394 397-417NEURAMINIDASE PHEMA_MUMPM HEMAGGLUTININ- MUMPS VIRUS (STRAIN 101-125133-148 225-246 367-394 397-417 NEURAMINIDASE MIYAHARA VACCINE)PHEMA_MUMPR HEMAGGLUTININ- MUMPS VIRUS (STRAIN RW) 101-125 133-148225-246 367-394 397-417 NEURAMINIDASE PHEMA_MUMPS HEMAGGLUTININ- MUMPSVIRUS (STRAIN SBL) 101-125 133-148 NEURAMINIDASE PHEMA_NDVAHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAINAUSTRALIA- VICTORIA/32) PHEMA_NDVB HEMAGGLUTININ- NEWCASTLE DISEASEVIRUS 93-110 NEURAMINIDASE (STRAIN BEAUDETTE C/45) PHEMA_NDVDHEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIND26/76) PHEMA_NDVH4 HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110NEURAMINIDASE (STRAIN B1-HITCHNER/47) PHEMA_NDVI HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN ITALIEN/45)PHEMA_NDVM HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE(STRAIN MIYADERA/51) PHEMA_NDVQ HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS93-110 NEURAMINIDASE (STRAIN QUEENSLAND/66) PHEMA_NDVTG HEMAGGLUTININ-NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE (STRAIN TEXAS G B/48)PHEMA_NDVU HEMAGGLUTININ- NEWCASTLE DISEASE VIRUS 93-110 NEURAMINIDASE(STRAIN ULSTER/67) PHEMA_PHODV HEMAGGLUTININ- PHOCINE DISTEMPER VIRUS36-58 213-234 493-513 NEURAMINIDASE PHEMA_PI1HW HEMAGGLUTININ- HUMANPARAINFLUENZA 1 VIRUS 29-53 322-342 345-360 486-503 NEURAMINIDASE(STRAIN WASHINGTON/1957) PHEMA_PI2H HEMAGGLUTININ- HUMAN PARAINFLUENZA 2VIRUS 13-40 65-88 118-136 NEURAMINIDASE (PIV-2) PHEMA_PI2HTHEMAGGLUTININ- HUMAN PARAINFLUENZA 2 VIRUS 13-40 65-88 118-136NEURAMINIDASE (STRAIN TOSHIBA) PHEMA_PI3B HEMAGGLUTININ- BOVINEPARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE PHEMA_PI3H4HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340NEURAMINIDASE (STRAIN N1H 47885) PHEMA_PI3HA HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STAINAUS/124854/74) PHEMA_PI3HT HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS111-128 272-299 324-340 NEURAMINIDASE (STRAIN TEX/545/80) PHEMA_PI3HUHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340NEURAMINIDASE (STRAIN TEX/9305/82) PHEMA_PI3HV HEMAGGLUTININ- HUMANPARAINFLUENZA 3 VIRUS 111-128 272-299 324-340 NEURAMINIDASE (STRAINTEX/12677/83) PHEMA_PI3HW HEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS111-128 272-299 324-340 NEURAMINIDASE (STRAIN WASH/641/79) PHEMA_PI3HXHEMAGGLUTININ- HUMAN PARAINFLUENZA 3 VIRUS 111-128 272-299 324-340NEURAMINIDASE (STRAIN WASH/1511/73) PHEMA_PI4HA HEMAGGLUTININ- HUMANPARAINFLUENZA 4A 50-67 NEURAMINIDASE VIRUS (STRAIN TOSHIBA) PHEMA_RINDKHEMAGGLUTININ- RINDERPEST VIRUS (STRAIN 368-383 NEURAMINIDASE KABETE O)PHEMA_RINDL HEMAGGLUTININ- RINDERPEST VIRUS (STRAIN L) 4-30NEURAMINIDASE PHEMA_SEND5 HEMAGGLUTININ- SENDAI VIRUS (STRAIN Z/HOST322-342 NEURAMINIDASE MUTANTS) PHEMA_SENDF HEMAGGLUTININ- SENDAI VIRUS(STRAIN FUSHIMI) 322-342 NEURAMINIDASE PHEMA_SENDH HEMAGGLUTININ- SENDAIVIRUS (STRAIN HARRIS) 322-342 NEURAMINIDASE PHEMA_SENDJ HEMAGGLUTININ-SENDAI VIRUS (STRAIN HVJ) 322-342 NEURAMINIDASE PHEMA_SENDZHEMAGGLUTININ- SENDAI VIRUS (STRAIN Z) 322-342 NEURAMINIDASE PHEMA_SV41HEMAGGLUTININ- SIMIAN VIRUS 41 55-73 85-102 107-132 NEURAMINIDASEPHEMA_SV5 HEMAGGLUTININ- SIMIAN VIRUS 5 (STRAIN W3) 7-28 84-101 379-400NEURAMINIDASE PHEMA_SV5CM HEMAGGLUTININ- SIMIAN VIRUS 5 (ISOLATE 7-2884-101 379-400 NEURAMINIDASE CANINE/CP1−) PHEMA_SV5CP HEMAGGLUTININ-SIMIAN VIRUS 5 (ISOLATE 7-28 84-101 379-400 NEURAMINIDASE CANINE/CP1+)PHEMA_SV5LN HEMAGGLUTININ- 7-28 84-101 379-400 NEURAMINIDASE PHEMA_VACCCHEMAGGLUTININ VACCINIA VIRUS (STRAIN 173-192 PRECURSOR COPENHAGEN)PHEMA_VACCI HEMAGGLUTININ VACCINIA VIRUS (STRAIN IHD-J) 173-192PRECURSOR PHEMA_VACCT HEMAGGLUTININ VACCINIA VIRUS (STRAIN TIAN 173-192PRECURSOR TAN) PHEMA_VACCV HEMAGGLUTININ VACCINIA VIRUS (STRAIN WR)173-192 PRECURSOR PHEMA_VARV HEMAGGLUTININ VARIOLA VIRUS 175-194PRECURSOR PHEX8_ADE02 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 2 38-61119-140 PROTEIN PRECURSOR PHEX8_ADE03 HEXON-ASSOCIATED HUMAN ADENOVIRUSTYPE 3 27-48 PROTEIN PRECURSOR PHEX8_ADE05 HEXON-ASSOCIATED HUMANADENOVIRUS TYPE 5 38-61 119-140 PROTEIN PRECURSOR PHEX8_ADE41HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 41 38-61 128-146 PROTEINPRECURSOR PHEX8_ADEM1 HEXON-ASSOCIATED MOUSE ADENOVIRUS TYPE 1 36-52PROTEIN PRECURSOR PHEX9_ADE07 HEXON-ASSOCIATED HUMAN ADENOVIRUS TYPE 792-117 PROTEIN AND 3 PHEX9_ADEC2 HEXON-ASSOCIATED CANINE ADENOVIRUS TYPE2 52-77 PROTEIN PHEX9_ADENT HEXON-ASSOCIATED TUPAIA ADENOVIRUS 60-82PROTEIN PHRG_COWPX HOST RANGE PROTEIN COWPOX VIRUS 517-533 558-583609-636 PI177_ASFB7 LATE PROTEIN I177L AFRICAN SWINE FEVER VIRUS 68-83(STRAIN BA71V) PI196_ASFB7 LATE PROTEIN I196L AFRICAN SWINE FEVER VIRUS169-190 (STRAIN BA71V) PI226_ASFB7 LATE PROTEIN I226R AFRICAN SWINEFEVER VIRUS 60-77 (STRAIN BA71V) PI329_ASFB7 LATE PROTEIN I329L AFRICANSWINE FEVER VIRUS 239-260 PRECURSOR (STRAIN BA71V) PI78_ASFB7 EARLYPROTEIN I78R AFRICAN SWINE FEVER VIRUS 2-29 (STRAIN BA71V) PIBMP_SOCMVINCLUSION BODY MATRIX SOYBEAN CHLOROTIC MOTTLE 97-119 PROTEIN VIRUSPIC18_EBV PROBABLE PROCESSING AND EPSTEIN-BARR VIRUS 101-123 131-153759-777 TRANSPORT PROTEIN (STRAIN B95-8) PIC18_HCMVA PROBABLE PROCESSINGAND HUMAN CYTOMEGALOVIRUS 156-176 202-222 TRANSPORT PROTEIN (STRAINAD169) PIC18_HSV11 PROCESSING AND HERPEX SIMPLEX VIRUS 8-29 45-61122-143 751-768 TRANSPORT PROTEIN (TYPE 1/STRAIN 17) PIC18_HSV1APROCESSING AND HERPES SIMPLEX VIRUS 8-29 45-61 122-143 751-768 TRANSPORTPROTEIN (TYPE 1/STRAIN ANGELOTTI) PIC18_HSV1F PROCESSING AND HERPESSIMPLEX VIRUS 8-29 122-143 746-763 TRANSPORT PROTEIN (TYPE 1/STRAIN F)PIC18_HSVB2 PROBABLE PROCESSING AND BOVINE HERPESVIRUS TYPE 2 12-37130-151 TRANSPORT PROTEIN (STRAIN BMV) PIC18_HSVEB PROBABLE PROCESSINGAND EQUINE HERPESVIRUS TYPE 1 37-56 129-144 732-755 TRANSPORT PROTEINPIC18_HSVSA PROBABLE PROCESSING AND HERPESVIRUS SAIMIRI 27-49 51-78647-672 TRANSPORT PROTEIN (STRAIN 11) PIC18_MCMVS PROBABLE PROCESSINGAND MURINE CYTOMEGALOVIRUS 126-144 202-229 386-411 TRANSPORT PROTEIN(STRAIN SMITH) PIC18_PRVIF PROBABLE PROCESSING AND PSEUDORABIES VIRUS(STRAIN 285-307 698-718 TRANSPORT PROTEIN INDIANA-FUNKHAUSER/BECKER)PIC18_VZVD PROBABLE PROCESSING AND VARICELLA-ZOSTER VIRUS 69-88 619-639725-744 TRANSPORT PROTEIN (STRAIN DUMAS) PICP0_HSV11 IMMEDIATE-EARLYPROTEIN HERPES SIMPLEX VIRUS 668-684 (TYPE 1/STRAIN 17) PICP0_HSV2HVMW118 PROTEIN HERPES SIMPLEX VIRUS 713-729 (TYPE 2/STRAIN HG52)PICP0_PRVIF EARLY PROTEIN 0 PSEUDORABIES VIRUS (STRAIN 82-102INDIANA-FUNKHAUSER/BECKER) PICP3_HSV1F INFECTED CELL PROTEIN HERPESSIMPLEX VIRUS 211-227 (TYPE 1/STRAIN F) PICP4_HSV11 TRANS-ACTING HERPESSIMPLEX VIRUS 81-98 621-637 TRANSCRIPTIONAL PROTEIN (TYPE 1/STRAIN 17)PICP4_HSVEB TRANS-ACTING EQUINE HERPESVIRUS TYPE 1 708-725 736-759TRANSCRIPTIONAL PROTEIN (STRAIN AB4P) PICP4_HSVEK TRANS-ACTING EQUINEHERPESVIRUS TYPE 1 708-725 736-759 TRANSCRIPTIONAL PROTEIN (STRAINKENTUCKY A) PICP4_HSVMG TRANS-ACTING MAREK'S DISEASE HERPESVIRUS 488-506585-611 1202-1218 TRANSACTIVATOR PROTEIN (STRAIN GA) PICP4_VZVDTRANS-ACTING VARICELLA-ZOSTER VIRUS 547-563 TRANSCRIPTIONAL PROTEIN(STRAIN DUMAS) PIE18_PRVIF IMMEDIATE-EARLY PSEUDORABIES VIRUS (STRAIN731-748 PROTEIN IE180 INDIANA-FUNKHAUSER/BECKER) PIE18_PRVKAIMMEDIATE-EARLY PSEUDORABIES VIRUS 720-737 PROTEIN IE180 (STRAIN KAPLAN)PIE63_HCMVA TRANSCRIPTIONAL HUMAN CYTOMEGALOVIRUS 286-304 364-383REGULATOR IE63 HOMOLOG ( (STRAIN AD169) PIE63_HSV1I TRANSCRIPTIONALHERPES SIMPLEX VIRUS 378-394 REGULATOR IE63 (TYPE 1/STRAIN 17)PIE63_HSV2H TRANSCRIPTIONAL HERPES SIMPLEX VIRUS 378-394 REGULATOR IE63(TYPE 2/STRAIN HG52) PIE63_HSVEB TRANSCRIPTIONAL EQUINE HERPESVIRUS TYPE1 337-353 385-406 REGULATOR IE63 HOMOLOG (STRAIN AB4P) PIE63_HSVSA 52 KDIMMEDIATE-EARLY HERPESVIRUS SAIMIRI 301-326 PHOSPHOPROTEIN (STRAIN 11)PIE68_HSV11 IMMEDIATE-EARLY HERPES SIMPLEX VIRUS 189-205 PROTEIN IE68(TYPE 1/STRAIN 17) PIE68_HSVE4 IMMEDIATE-EARLY EQUINE HERPESVIRUS TYPE 481-104 PROTEIN IE68 PIE68_HSVEB IMMEDIATE-EARLY PROTEIN EQUINEHERPESVIRUS TYPE 1 93-116 PIE68_PRVKA IMMEDIATE-EARLY PROTEINPSEUDORABIES VIRUS 85-108 (STRAIN KAPLAN) PIE68_VZVD GENE 63/70 PROTEINVARICELLA-ZOSTER VIRUS 57-78 (STRAIN DUMAS) PIR14_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 117-137 (STRAIN AD169) PKERB_AVIER ERBBTYROSINE KINASE AVIAN ERYTHROBLASTOSIS 64-84 297-324 TRANSFORMINGPROTEIN VIRUS PKFES_FSVGA TYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS73-88 TRANSFORMING PROT (STRAIN GARDNER-ARNSTEIN) PKFES_FSVSTTYROSINE-PROTEIN KINASE FELINE SARCOMA VIRUS 2-22 TRANSFORMING PROT(STRAIN SNYDER-THEILEN) PKFGR_FSVGR TYROSINE-PROTEIN KINASE FELINESARCOMA VIRUS 269-288 TRANSFORMING PROT (STRAIN GARDNER-RASHEED)PKFMS_FSVMD FMS TYROSINE KINASE FELINE SARCOMA VIRUS 141-159 243-263434-450 548-563 781-801 856-877 TRANSFORMING PROTEIN (STRAIN MCDONOUGH)PKFPS_AVISP TYROSINE-PROTEIN KINASE AVIAN SARCOMA VIRUS 247-274TRANSFORMING PROT (STRAIN PRC11) PKFPS_FUJSV TYROSINE-PROTEIN KINASEFUJINAMI SARCOMA VIRUS 259-275 346-370 400-420 587-614 TRANSFORMING PROTPKITH_ASFB7 THYMIDINE KINASE AFRICAN SWINE FEVER VIRUS 18-41 (STRAINBA71V) PKITH_EBV THYMIDINE KINASE EPSTEIN-BARR VIRUS 403-418 428-446(STRAIN B95-8) PKITH_FLDV THYMIDINE KINASE FISH LYMPHOCYSTIS DISEASE96-117 252-275 VIRUS PKITH_HSV11 THYMIDINE KINASE HERPES SIMPLEX VIRUS223-249 (TYPE 1/STRAIN 17) PKITH_HSV1C THYMIDINE KINASE HERPES SIMPLEXVIRUS 223-249 (TYPE 1/STRAIN CL101) PKITH_HSV1E THYMIDINE KINASE HERPESSIMPLEX VIRUS 223-249 (TYPE 1/STRAIN HFEM) PKITH_HSV1K THYMIDINE KINASEHERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN KOS) PKITH_HSV1S THYMIDINEKINASE HERPES SIMPLEX VIRUS 223-249 (TYPE 1/STRAIN SC16) PKITH_HSV23THYMIDINE KINASE HERPES SIMPLEX VIRUS 224-250 333-348 (TYPE 2/STRAIN333) PKITH_HSVB6 THYMIDINE KINASE BOVINE HERPESVIRUS TYPE 1 193-219280-304 (STRAIN 6660) PKITH_HSVBH THYMIDINE KINASE BOVINE HERPESVIRUSTYPE 2 180-202 (STRAIN BHM-1) PKITH_HSVBM THYMIDINE KINASE BOVINEHERPESVIRUS TYPE 3 381-399 609-633 (STRAIN WC11) PKITH_HSVBQ THYMIDINEKINASE BOVINE HERPESVIRUS TYPE 1 2 194-220 282-306 (STRAIN Q3932)PKITH_HSVE4 THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 4 174-193 261-284(STRAIN 1942) PKITH_HSVEB THYMIDINE KINASE EQUINE HERPESVIRUS TYPE 118-33 174-193 274-298 (STRAIN AB4P) AND (ISOLATE HVS25A) PKITH_HSVFTHYMIDINE KINASE FELINE HERPESVIRUS 171-189 (FELID HERPESVIRUS 1)PKITH_HSVI1 THYMIDINE KINASE ICTALURID HERPESVIRUS 1 14-32 PKITH_HSVMRTHYMIDINE KINASE MARMOSET HERPESVIRUS 189-215 PKITH_HSVSA THYMIDINEKINASE HERPESVIRUS SAIMIRI 208-232 (STRAIN 11) PKITH_ILTVT THYMIDINEKINASE INFECTIOUS 183-202 208-234 LARYNGOTRACHEITIS VIRUS (STRAIN THORNEV882) PKITH_VZV4 THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216(ACYCLOVIR-RESISTANT STRAIN 40A2) PKITH_VZV7 THYMIDINE KINASEVARICELLA-ZOSTER VIRUS 197-216 (ACYCLOVIR-RESISTANT STRAIN 7-1-3)PKITH_VZVD THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216 (STRAINDUMAS) PKITH_VZVG THYMIDINE KINASE VARICELLA-ZOSTER VIRUS 197-216(ACYCLOVIR-RESISTANT STRAIN GK) PKITH_VZVW THYMIDINE KINASEVARICELLA-ZOSTER VIRUS (VZV) 197-216 PKKIT_FSVHZ KIT TYROSINE KINASEFELINE SARCOMA VIRUS 192-214 276-297 TRANSFORMING PROTEIN (STRAINHARDY-ZUCKERMAN 4) PKR15_HSVI1 GENE 15 PROTEIN KINASE ICTALURIDHERPESVIRUS 1 151-167 358-374 PKR16_HSVI1 GENE 16 PROTEIN KINASEICTALURID HERPESVIRUS 1 197-217 286-311 PKR1_HSVI1SERINE/THREONINE-PROTEIN HERPES SIMPLEX VIRUS 280-296 358-377 KINASE(TYPE 1/STRAIN 17) PKR1_HSV2 SERINE/THREONINE-PROTEIN HERPES SIMPLEXVIRUS 276-296 358-377 KINASE (TYPE 2) PKR1_HSVEBSERINE/THREONINE-PROTEIN EQUINE HERPESVIRUS TYPE 1 289-307 KINASE(STRAIN AB4P) PKR1_HSVEK SERINE/THREONINE-PROTEIN EQUINE HERPESVIRUSTYPE 1 289-307 KINASE (STRAIN KENTUCKY A) PKR1_VZVDSERINE/THREONINE-PROTEIN VARICELLA-ZOSTER VIRUS 179-197 KINASE (STRAINDUMAS) PKR2_EBV PROBABLE EPSTEIN-BARR VIRUS 196-211 313-338SERINE/THREONINE- (STRAIN B95-8) PROTEIN KINASE PKR2_HSVI1 PROBABLEHERPES SIMPLEX VIRUS 247-267 SERINE/THREONINE- (TYPE 1/STRAIN 17)PROTEIN KINASE PKR2_HSVEB PROBABLE EQUINE HERPESVIRUS TYPE 1 317-339441-462 SERINE/THREONINE- (STRAIN AB4P) PROTEIN KINASE PKR2_PRVN3SERINE/THREONINE- PSEUDORABIES VIRUS 164-185 282-305 PROTEIN KINASE 2(STRAIN NIA-3) PKR2_VZVD PROBABLE VARICELLA-ZOSTER VIRUS 116-131 226-247354-373 SERINE/THREONINE- (STRAIN DUMAS) PROTEIN KINASE PKR73_HSVI1 GENE73 PROTEIN KINASE ICTALURID HERPESVIRUS 1 841-858 PKR74_HSVI1 GENE 74PROTEIN KINASE ICTALURID HERPESVIRUS 1 359-380 548-575 PKRB1_VACCC 30 KDPROTEIN KINASE VACCINIA VIRUS 199-214 HOMOLOG (STRAIN COPENHAGEN)PKRB1_VACCV 30 KD PROTEIN KINASE VACCINIA VIRUS 199-214 HOMOLOG (STRAINWR) PKRB1_VARV 30 KD PROTEIN KINASE VARIOLA VIRUS 199-214 HOMOLOGPKRF1_SFVKA POSSIBLE PROTEIN KINASE SHOPE FIBROMA VIRUS 83-98 C20(STRAIN KASZA) PKRF1_VACCC POSSIBLE PROTEIN KINASE VACCINIA VIRUS 85-100F10 (STRAIN COPENHAGEN) PKRF1_VACCP POSSIBLE PROTEIN KINASE VACCINIAVIRUS 52-67 F10 (STRAIN L-IVP) PKRF1_VARV POSSIBLE PROTEIN KINASEVARIOLA VIRUS 85-100 F10 PKROS_AVISU ROS TYR KINASE AVIAN SARCOMA VIRUS6-29 202-223 284-305 TRANSFORMING PROTEIN (STRAIN UR2) PKRYK_AVIR3TYR-PROTEIN KINASE AVIAN RETROVIRUS RPL30 154-172 221-241 TRANSFORMINGPROTEIN R PKSEA_AVIET TYR-PROTEIN KINASE AVIAN ERYTHROBLASTOSIS 158-177TRANSFORMING PROTEIN SE VIRUS (STRAIN S13) PKSRC_AVIS2 TYR-PROTEINKINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAINPR2257) PKSRC_AVISR TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377TRANSFORMING PROTEIN SR (STRAIN RASV1441) PKSRC_AVISS TYR-PROTEIN KINASEAVIAN SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN S1)PKSRC_AVIST TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS 361-377 TRANSFORMINGPROTEIN SR (STRAIN S2) PKSRC_RSVH1 TYR-PROTEIN KINASE ROUS SARCOMA VIRUS361-377 TRANSFORMING PROTEIN SR (STRAIN H-19) PKSRC_RSVP TYR-PROTEINKINASE ROUS SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAIN PRAGUEC) PKSRC_RSVPA TYR-PROTEIN KINASE ROUS SARCOMA VIRUS 358-374TRANSFORMING PROTEIN SR (STRAIN PA101T) PKSRC_RSVSR TYR-PROTEIN KINASEROUS SARCOMA VIRUS 361-377 TRANSFORMING PROTEIN SR (STRAINSCHMIDT-RUPPIN) PKYES_AVISY TYR-PROTEIN KINASE AVIAN SARCOMA VIRUS361-377 TRANSFORMING PROTEIN Y (STRAIN Y73) PL100_ADE02 LATE 100 KDPROTEIN HUMAN ADENOVIRUS TYPE 2 489-511 PL100_ADE05 LATE 100 KD PROTEINHUMAN ADENOVIRUS TYPE 5 489-511 PL100_ADE41 LATE 100 KD PROTEIN HUMANADENOVIRUS TYPE 41 458-480 PL52_ADE02 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 2 237-259 PL52_ADE05 LATE L1 52 KD PROTEIN HUMANADENOVIRUS TYPE 5 237-259 PLEC1_FOWPM HEPATIC LECTIN HOMOLOG FOWLPOXVIRUS (ISOLATE 2-26 HP-438(MUNICH)) PLMP1_EBV LATENT MEMBRANEEPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1 (STRAIN B95-8) PLMP1_EBVCLATENT MEMBRANE EPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1 (STRAIN B95-8)PLMP1_EBVR LATENT MEMBRANE EPSTEIN-BARR VIRUS 20-43 79-100 PROTEIN 1(STRAIN B95-8) PLMP2_EBV GENE TERMINAL PROTEIN EPSTEIN-BARR VIRUS181-196 204-226 267-288 291-315 346-369 390-410 (STRAIN B95-8)PMCEL_SFVKA MRNA CAPPING ENZYME, SHOPE FIBROMA VIRUS 244-260 556-578679-699 LARGE SUBUNIT (STRAIN KASZA) PMCEL_VACCC MRNA CAPPING ENZYME,VACCINIA VIRUS 81-102 265-282 289-312 687-707 LARGE SUBUNIT (STRAINCOPENHAGEN) PMCEL_VACCV MRNA CAPPING ENZYME, VACCINIA VIRUS (STRAIN WR)81-102 265-282 289-312 687-707 LARGE SUBUNIT PMCEL_VARV MRNA CAPPINGENZYME, VARIOLA VIRUS 81-102 265-282 289-312 687-707 LARGE SUBUNITPMCE_ASFB7 MRNA CAPPING ENZYME AFRICAN SWINE FEVER VIRUS 217-243 (STRAINBA71V) PMCE_REOVD MRNA CAPPING ENZYME REOVIRUS (TYPE 3/STRAIN 358-384567-588 714-741 DEARING) PMOVP_CGMVS MOVEMENT PROTEIN CUCUMBER GREENMOTTLE 157-172 MOSAIC VIRUS (WATERMELON STRAIN S) PMOVP_CGMVW MOVEMENTPROTEIN CUCUMBER GREEN MOTTLE 157-172 MOSAIC VIRUS (WATERMELON STRAIN)PMOVP_ORSV MOVEMENT PROTEIN ODONTOGLOSSUM RINGSPOT 49-74 178-205 VIRUSPMOVP_PPMVS MOVEMENT PROTEIN PEPPER MILD MOTTLE VIRUS 25-50 186-201(STRAIN SPAIN) PMOVP_TMGMV MOVEMENT PROTEIN TOBACCO MILD GREEN MOSAIC186-201 VIRUS (TMV STRAIN U2) PMOVP_TMVCO MOVEMENT PROTEIN TOBACCOMOSAIC VIRUS 88-107 156-171 (STRAIN COWPEA) PMTC1_CHVN1 MODIFICATIONCHOLRELLA VIRUS NC-1A 129-156 METHYLASE CVIBI PMTC2_CHVP1 MODIFICATIONPARAMECIUM BURSARIA 72-94 METHYLASE CVIAII CHLORELLA VIRUS 1 (PMTC3_CHVN1 MODIFICATION CHLORELLA VIRUS NC-1A 177-192 265-286 METHYLASECVIBIII PMYBE_AVILE P135-GAG-MYB-ETS AVIAN LEUKEMIA VIRUS E26 104-124TRANSFORMING PROTEIN ( PMYB_AVIMB MYB TRANFORMING PROTEIN AVIANMYELOBLASTOSIS VIRUS 218-238 301-326 PNCAP_AINOV NUCLEOCAPSID PROTEINAINO VIRUS 159-181 PNCAP_BUNLC NUCLEOCAPSID PROTEIN BUNYAVIRUS LA CROSSE84-99 PNCAP_BUNSH NUCLEOCAPSID PROTEIN BUNYAVIRUS SNOWSHOE HARE 84-99PNCAP_CDVO NUCLEOCAPSID PROTEIN CANINE DISTEMPER VIRUS 31-50 (STRAINONDERSTEPOORT) PNCAP_FIPV NUCLEOCAPSID PROTEIN FELINE INFECTIOUSPERITONITIS 57-74 VIRUS (STRAIN 79-1146) PNCAP_HANTV NUCLEOCAPSIDPROTEIN HANTAAN VIRUS (STRAIN 76-118) 317-342 PNCAP_HAZVJ NUCLEOCAPSIDPROTEIN HAZARA VIRUS (ISOLATE JC280) 428-446 PNCAP_IHNV NUCLEOCAPSIDPROTEIN INFECTIOUS HEMATOPOIETIC 110-137 239-265 NECROSIS VIRUS (STRAINROUND BUT) PNCAP_INSV NUCLEOCAPSID PROTEIN IMPATIENS NECROTIC SPOT155-179 VIRUS PNCAP_MEASE NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN40-59 EDMONSTON) PNCAP_MEASH NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAINHALLE) 40-59 PNCAP_MEASY NUCLEOCAPSID PROTEIN MEASLES VIRUS (STRAIN40-59 YAMAGATA-1) PNCAP_MUMP1 NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAINSBL-1) 156-178 PNCAP_MUMPM NUCLEOCAPSID PROTEIN MUMPS VIRUS (STRAIN156-178 MIYAHARA VACCINE) PNCAP_PHV NUCLEOCAPSID PROTEIN PROSPECT HILLVIRUS 36-58 218-236 256-277 321-346 PNCAP_PI1HC NUCLEOCAPSID PROTEINHUMAN PARAINFLUENZA 1 VIRUS 42-58 86-102 (STAIN C39) PNCAP_PI1HWNUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 1 VIRUS 42-58 86-102 (STRAINWASHINGTON/1957) PNCAP_PI3B NUCLEOCAPSID PROTEIN BOVINE PARAINFLUENZA 3VIRUS 163-184 PNCAP_PI3H4 NUCLEOCAPSID PROTEIN HUMAN PARAINFLUENZA 3VIRUS 163-184 (STRAIN NIH 47885) PNCAP_PUUMH NUCLEOCAPSID PROTEINPUUMALA VIRUS (STRAIN 36-58 321-346 HALLNAS B1) PNCAP_PUUMS NUCLEOCAPSIDPROTEIN PUUMALA VIRUS (STRAIN 36-58 218-236 321-346 SOTKAMO) PNCAP_RABVANUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN AVO1) 299-322 PNCAP_RABVPNUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN PV) 299-322 PNCAP_RABVSNUCLEOCAPSID PROTEIN RABIES VIRUS (STRAIN SAD B19) 299-322 PNCAP_RVFVZNUCLEOCAPSID PROTEIN RIFT VALLEY FEVER VIRUS 158-180 (STRAIN ZH-548 M12)PNCAP_SEND5 NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAIN Z/ 29-51 86-102HOST MUTANTS) PNCAP_SENDE NUCLEOCAPSID PROTEIN SENDAI VIRUS (STRAINENDERS) 42-58 86-102 PNCAP_SENDH NUCLEOCAPSID PROTEIN SENDAI VIRUS(STRAIN HARRIS) 42-58 86-102 PNCAP_SENDZ NUCLEOCAPSID PROTEIN SENDAIVIRUS (STRAIN Z) 29-51 86-102 PNCAP_SEOUS NUCLEOCAPSID PROTEIN SEOULVIRUS (STRAIN SR-11) 112-138 317-342 PNCAP_SFSV NUCLEOCAPSID PROTEINSANDFLY FEVER SICILIAN VIRUS 156-181 PNCAP_TACV NUCLEOCAPSID PROTEINTACARIBE VIRUS 219-241 PNCAP_UUK NUCLEOCAPSID PROTEIN UUKUNIEMI VIRUS167-189 PNCAP_VHSV0 NUCLEOCAPSID PROTEIN VIRAL HEMORRHAGIC 240-266SEPTICEMIA VIRUS (STRAIN 07-71) PNCAP_VHSVM NUCLEOCAPSID PROTEIN VIRALHEMORRHAGIC 240-266 SPETICEMIA VIRUS (STRAIN MAKAH) PNCAP_VSVJONUCLEOCAPSID PROTEIN VESICULAR STOMATITIS VIRUS 64-80 SEROTYPE NEWJERSEY/ STRAIN OG) PNCAP_VSVSJ PNEF_HV2RO NEGATIVE FACTOR HUMANIMMUNODEFICIENCY 110-129 VIRUS TYPE 2 (ISOLATE ROD) PNEF_HV2ST NEGATIVEFACTOR HUMAN IMMUNODEFICIENCY 106-128 VIRUS TYPE 2 (ISOLATE ST)PNRAM_IABDA NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/BLACKDUCK/AUSTRALIA/ 702/78) PNRAM_IACHI NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 3-24 A/CHILE/1/83) PNRAM_IADA1 NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 3-24 A/DUCK/ALBERTA/28/76) PNRAM_IADGE NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 3-29 A/DUCK/GERMANY/49) PNRAM_IAFPW NEURAMINIDASEINFLUENZA A VIRUS (STRAIN 3-29 301-317 A/FOWL PLAGUE VIRUS/ WEYBRIDGE)PNRAM_IAHCO NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 299-315A/EQUINE/COR/16/74) PNRAM_IAHK1 NEURAMINIDASE INFLUENZA A VIRUS (STRAIN3-29 A/EQUINE/KENTUCKY/1/81) PNRAM_IAKIE NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 3-24 A/KIEV/59/79) PNRAM_IALEN NEURAMINIDASE INFLUENZA A VIRUS(STRAIN 3-24 A/LENINGRAD/54/1) PNRAM_IAME1 NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 3-30 A/MEMPHIS/1/71H-A/ BELLAMY/42N) PNRAM_IAPARNEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/PARROT/ULSTER/73)PNRAM_IAPUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-30 A/PUERTORICO/8/34) PNRAM_IARUE NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29A/RUDDY TURNSTONE/ NEW JERSEY/60/) PNRAM_IASH2 NEURAMINIDASE INFLUENZA AVIRUS (STRAIN 3-29 A/SHEARWATER/AUSTRALIA/72) PNRAM_IATKR NEURAMINIDASEINFLUENZA A VIRUS (STRAIN 3-24 56-77 A/TURKEY/OREGON/71) PNRAM_IATRANEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29 A/TERN/AUSTRALIA/G70C/75)PNRAM_IAUSS NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-24 A/USSR/90/77)PNRAM_IAWHM NEURAMINIDASE INFLUENZA A VIRUS (STRAIN 3-29A/WHALE/MAINE/1/84) PNRAM_IAWIL NEURAMINIDASE INFLUENZA A VIRUS (STRAIN3-30 A/WILSON-SMITH/33) PNRAM_INBBE NEURAMINIDASE INFLUENZA B VIRUS(STRAIN 3-20 B/BEIJING/1/87) PNRAM_INBHK NEURAMINIDASE INFLUENZA B VIRUS(STRAIN 3-20 B/HONG KONG/8/73) PNRAM_INBLE NEURAMINIDASE INFLUENZA BVIRUS (STRAIN 3-20 B/LEE/40) PNRAM_INBLN NEURAMINIDASE INFLUENZA B VIRUS(STRAIN 3-20 B/LENINGRAD/179/86) PNRAM_INBMD NEURAMINIDASE INFLUENZA BVIRUS (STRAIN 3-20 B/MARYLAND/59) PNRAM_INBMF NEURAMINIDASE INFLUENZA BVIRUS (STRAIN 3-20 B/MEMPHIS/3/89) PNRAM_INBOR NEURAMINIDASE INFLUENZA BVIRUS (STRAIN 3-20 B/OREGON/5/80) PNRAM_INBSI NEURAMINIDASE INFLUENZA BVIRUS (STRAIN 3-20 B/SINGAPORE/222/79) PNRAM_INBUS NEURAMINIDASEINFLUENZA B VIRUS (STRAIN 3-20 B/USSR/100/83) PNRAM_INBV1 NEURAMINIDASEINFLUENZA B VIRUS (STRAIN 3-20 B/VICTORIA/3/85) PNS1_SIDEV PROBABLENONSTRUCTURAL BOMBYX DENSONUCLEOSIS 135-151 PROTEIN PRECURSO VIRUSPNS2_SIDEV PROBABLE STRUCTURAL BOMBYX DENSONUCLEOSIS 2-26 196-221783-806 PROTEIN PRESURSO VIRUS PNS3_SIDEV PROBABLE NONSTRUCTURAL BOMBYXDENSONUCLEOSIS 60-78 PROTEIN PRECURSOR VIRUS PNSS_TSWVB NON-STRUCTURALPROTEIN TOMATO SPOTTED WILT VIRUS 80-105 431-455 (BRAZILIAN IOSLOATECPNH1/ BR-01) PNSS_TSWVL NON-STRUCTURAL PROTEIN TOMATO SPOTTED WILTVIRUS 80-105 436-458 (STRAIN L3) PNTP1_VACCC NUCLEOSIDE VACCINIA VIRUS(STRAIN 20-45 387-403 TRIPHOSPHATASE I COPENHAGEN) PNTP1_VACCVNUCLEOSIDE VACCINIA VIRUS (STRAIN WR) 20-45 387-403 TRIPHOSPHATASE IPNTP1_VARV NUCLEOSIDE VARIOLA VIRUS 293-309 TRIPHOSPHATASE I PP100_HSV6UMAJOR ANTIGENIC HERPES SIMPLEX VIRUS (TYPE 6/ 182-204 250-270 344-366STRUCTURAL PROTEIN STRAIN UGANDA-1102) PPAP2_FOWPV POLY(A) POLYMERASEFOWLPOX VIRUS 79-100 REGULATORY SUBUNIT PPAP2_MYXVA POLY(A) POLYMERASEMYXOMA VIRUS (ISOLATE AUST/ 101-116 REGULATORY SUBUNITURIARRA/VERG-86/1) PPAP2_VACCC POLY(A) POLYMERASE VACCINIA VIRUS (STRAIN101-116 REGULATORY SUBUNIT COPENHAGEN) PPAP2_VACCV POLY(A) POLYMERASEVACCINIA VIRUS (STRAIN WR) 101-116 REGULATORY SUBUNIT PPAP2_VARV POLY(A)POLYMERASE VARIOLA VIRUS 101-116 REGULATORY SUBUNIT PPCNA_NPVACPROLIFERATING CELL AUTOGRAPHA CALIFORNICA 67-89 227-244 NUCLEAR ANTIGENNUCLEAR POLYHEDROSIS VIRUS PPE21_NPVOP 21 2 KD PROTEIN IN PE ORGYIAPSEUDOTSUGATA 117-139 5′REGION MULTICAPSID POLYHEDROSIS VIRUSPPE25_NPVAC 25 1 KD PROTEIN IN PE-P26 AUTOGRAPHA CALIFORNICA 57-83INTERGENIC REGION NUCLEAR POLYHEDROSIS VIRUS PPE38_NPVAC MAJOR IMMEDIATEEARLY AUTOGRAPHA CALIFORNICA 17-33 PROTEIN NUCLEAR POLYHEDROSIS VIRUSPPEN3_ADE02 PENTON PROTEIN HUMAN ADENOVIRUS TYPE 2 171-195 PPEN3_ADE05PENTON PROTEIN HUMAN ADENOVIRUS TYPE 5 171-195 PPEN3_ADEGX PENTONPROTEIN AVIAN ADENOVIRUS GAL10 194-214 307-324 (STRAIN SA2) PPIV2_ADE07MATURATION PROTEIN HUMAN ADENOVIRUS TYPE 7 412-431 PPIV2_ADEM1MATURATION PROTEIN MOUSE ADENOVIRUS TYPE 1 409-428 PPOL1_BAYMG GENOMEPOLYPROTEIN 1 BARLEY YELLOW MOSAIC VIRUS 739-755 835-856 1072-10941889-1910 (GERMAN ISOLATE) PPOL1_BAYMJ GENOME POLYPROTEIN 1 BARLEYYELLOW MOSAIC VIRUS 739-755 835-856 1072-1094 1465-1485 1888-1909(JAPANESE STRAIN II-1) PPOL1_GCMV RNA1 POLYPROTEIN HUNGARIAN GRAPEVINE691-717 1040-1062 1116-1143 CHROME MOSAIC VIRUS PPOL1_GFLV RNA1POLYPROTEIN GRAPEVINE FANLEAF VIRUS 380-396 477-503 545-564 1079-10981149-1171 1341-1356 1761-1785 1821-1848 2020-2044 PPOL1_TBRVS RNA1POLYPROTEIN TOMATO BLACK RING VIRUS 1132-1159 (STRAIN S) PPOL2_ARMV RNA2POLYPROTEIN ARABIS MOSAIC VIRUS 129-150 243-266 346-367 PPOL2_BAYMGGENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS 325-350 463-485 (GERMANISOLATE) PPOL2_BAYMJ GENOME POLYPROTEIN 2 BARLEY YELLOW MOSAIC VIRUS325-350 463-485 (JAPANSES STRAIN II-1) PPOL2_GFLV RNA2 POLYPROTEINGRAPEVINE FANLEAF VIRUS 808-829 1021-1045 PPOL2_TBRVS RNA2 POLYPROTEINTOMATO BLACK RING VIRUS 425-446 541-557 856-876 1203-1223 (STRAIN S)PPOL2_TRSVR RNA2 POLYPROTEIN TOMATO RINGSPOT VIRUS 316-340 427-4481527-1554 (ISOLATE RASPBERRY) PPOLG_BOVEV GENOME POLYPROTEIN BOVINEENTEROVIRUS 1833-1859 (STRAIN VG-5-27) PPOLG_BVDVN GENOME POLYPROTEINBOVINE VIRAL DIARRHEA VIRUS 627-653 943-965 1119-1134 1282-12971363-1387 1868-1892 2460-2487 2608-2628 2883-2898 (ISOLATE NADL)3141-3161 3220-3241 3856-3871 3967-3986 PPOLG_BVDVS GENOME POLYPROTEINBOVINE VIRAL DIARRHEA VIRUS 627-653 943-965 1119-1134 1138-11631189-1205 1282-1297 1363-1387 1778-1802 2370-2397 (STRAIN SD-1)2518-2538 2741-2766 2793-2808 3766-3781 PPOLG_COXA2 GENOME POLYPROTEINCOXSACKIEVIRUS A21 850-867 (STRAIN COE) PPOLG_COXA3 GENOME POLYPROTEINCOXSACKIEVIRUS A23 67-92 (ECHO 9 VIRUS) PPOLG_COXA9 GENOME POLYPROTEINCOXSACKIEVIRUS A9 1491-1517 1601-1626 (STRAIN GRIGGS) PPOLG_COXB1 GENOMEPOLYPROTEIN COXSACKIEVIRUS B1 1472-1498 1582-1607 PPOLG_COXB3 GENOMEPOLYPROTEIN COXSACKEIVIRUS B3 228-255 1475-1501 1585-1610 PPOLG_COXB4GENOME POLYPROTEIN COXSACKIEVIRUS B4 821-846 1473-1499 1583-1608PPOLG_COXB5 GENOME POLYPROTEIN COXSACKIEVIRUS B5 1475-1501 1585-1610PPOLG_DEN1S GENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 918-9431111-1138 1211-1236 1243-1260 1612-1628 2222-2248 2348-2365 2401-24263050-3069 SINGAPORE S275/90) PPOLG_DEN1W GENOME POLYPROTEIN DENGUE VIRUSTYPE 1 (STRAIN 919-944 1112-1139 WESTERN PACIFIC) PPOLG_DEN23 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (ISOLATE 336-354 MALAYSIA M3)PPOLG_DEN26 GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 848-868919-944 1112-1139 1244-1261 1283-1301 1613-1629 2293-2318 2347-23642405-2425 16681) 2700-2726 PPOLG_DEN27 GENOME POLYPROTEIN DENGUE VIRUSTYPE 2 (STRAIN 848-868 919-944 1112-1139 1244-1261 1283-1301 1376-13961613-1629 2293-2318 2347-2364 16681-PDK53) 2405-2425 2700-2726PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 848-868 919-944(STRAIN D2-04) PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2848-868 919-944 1112-1139 1244-1261 1176-1396 1613-1629 2293-23182347-2364 2405-2425 (STRAIN JAMAICA) 2700-2726 PPOLG_DEN2N GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 100-120 171-196 364-391 (STRAIN NEWGUINEA C) PPOLG_DEN2P GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 919-9441112-1139 1244-1261 1283-1301 1376-1396 1613-1629 2290-2315 2344-23612402-2422 (STRAIN PR159/51) 2697-2723 PPOLG_DEN2T GENOME POLYPROTEINDENGUE VIRUS TYPE 2 639-664 832-859 964-981 1203-1219 (STRAIN TONGA1974) PPOLG_DEN3 GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 917-9421210-1228 1242-1259 1174-1194 1611-1627 2141-2162 2221-2247 2146-23612199-2424 2698-2724 3048-3067 PPOLG_DEN4 GENOME POLYPROTEIN DENGUE VIRUSTYPE 4 1209-1227 1241-1258 1611-1627 2220-2246 2342-2359 2400-24203045-3064 PPOLG_EC11G GENOME POLYPROTEIN ECHOVIRUS 11 (STRAIN GREGORY)664-690 774-799 PPOLG_EMCV GENOME POLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS225-247 558-578 1194-1215 1650-1667 PPOLG_EMCVB GENOME POLYPROTEINENCEPHALOMYOCARDITIS VIRUS 560-580 1120-1141 1196-1217 (STRAIN EMC-BNONDIABETOGENI) PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITISVIRUS 560-580 1120-1141 1196-1217 (STRAIN EMC-D DIABETOGENIC)PPOLG_ENMG3 GENOME POLYPROTEIN MENGO ENCEPHALOMYOCAR- 560-580 DITISVIRUS (STRAIN 37A) PPOLG_ENMGO GENOME POLYPROTEIN MENGO ENCEPHALOMYOCAR-493-513 DITIS VIRUS PPOLG_FMDV1 GENOME POLYPROTEIN FOOT-AND-MOUTHDISEASE 121-141 984-1003 1036-1057 1396-1411 1465-1487 1764-1791 VIRUS(STRAIN A10-61) PPOLG_FMDV5 GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE162-187 VIRUS (STRAIN A5) PPOLG_FMDVA GENOME POLYPROTEIN FOOT-AND-MOUTHDISEASE 121-140 984-1003 1036-1057 1396-1411 1465-1487 1763-1790 VIRUS(STRAIN A12) PPOLG_FMDVO GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE121-141 984-1003 1036-1057 1396-1411 1465-1487 1763-1790 VIRUS (STRAINSO1K AND O1BFS)( PPOLG_FMDVS GENOME POLYPROTEIN FOOT-AND-MOUTH DISEASE301-320 VIRUS (STRAIN C1-SANTA PAU [C-S8]) PPOLG_FMDVT GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE 121-141 979-998 VIRUS (STRAIN C1)PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1) 112-133143-169 619-640 683-699 833-857 2327-2347 2442-2457 2837-2859 PPOLG_HCVAGENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 102-128 1143-1163 1282-13011778-1802 2370-2397 2518-2538 3131-3152 3737-3753 3767-3782 ALFORT)3877-3893 PPOLG_HCVB GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN102-128 1143-1163 1282-1301 1778-1802 2370-2397 2518-2538 3131-31523737-3753 3767-3782 BRESCIA) 3877-3893 PPOLG_HCVBK GENOME POLYPROTEINHEPATITIS C VIRUS 112-133 143-169 619-640 683-699 2327-2347 2441-24562836-2858 2988-3007 (ISOLATE BK) PPOLG_HCVE1 GENOME POLYPROTEINHEPATITIS C VIRUS 27-53 (ISOLATE EC1) PPOLG_HCVH GENOME POLYPROTEINHEPATITIS C VIRUS 112-133 143-169 619-640 683-699 833-853 863-8802442-2457 2837-2859 (ISOLATE H) PPOLG_HCVH4 GENOME POLYPROTEIN HEPATITISC VIRUS 112-133 143-169 (ISOLATE HCV-476) PPOLG_HCVH7 GENOME POLYPROTEINHEPATITIS C VIRUS 15-41 (ISOLATE HCT27) PPOLG_HCVH8 GENOME POLYPROTEINHEPATITIS C VIRUS 27-53 (ISOLATE HCT18) PPOLG_HCVHK GENOME POLYPROTEINHEPATITIS C VIRUS 112-133 143-169 (ISOLATE HCV-KF) PPOLG_HCVJ2 GENOMEPOLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 (ISOLATE HC-J2)PPOLG_HCVJ5 GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 623-644687-703 (ISOLATE HC-J5) PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS112-133 143-169 623-644 687-703 837-861 1827-1853 2327-2347 2859-28813011-3030 (ISOLATE HC-J6) PPOLG_HCVJ7 GENOME POLYPROTEIN HEPATITIS CVIRUS 143-169 623-644 687-703 (ISOLATE HC-J7) PPOLG_HCVJ8 GENOMEPOLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 687-703 837-861 867-8841172-1188 1827-1853 2859-2881 3011-3030 (ISOLATE HC-J8) PPOLG_HCVJAGENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640 683-699833-857 863-880 2327-2347 2836-2858 2988-3007 (ISOLATE JAPANESE)PPOLG_HCVJT GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640683-699 833-857 2327-2347 2441-2456 2836-2858 (ISOLATE HC-JT)PPOLG_HCVTH GENOME POLYPROTEIN HEPATITIS C VIRUS 27-53 (ISOLATE TH)PPOLG_HCVTW GENOME POLYPROTEIN HEPATITIS C VIRUS 112-133 143-169 619-640683-699 833-857 2327-2347 2441-2456 2836-2858 2988-3007 (ISOLATE TAIWAN)PPOLG_HPAV1 GENOME POLYPROTEIN HEPATITIS A VIRUS 303-323 (STRAIN LCDC-1)PPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS 401-428 799-8191195-1210 1687-1708 2068-2092 (STRAIN 24A) PPOLG_HPAV4 GENOMEPOLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1687-1708 2008-20332068-2092 (STRAIN 43C) PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS799-819 1195-1210 1687-1708 2008-2033 2068-2092 (STAIN 18F) PPOLG_HPAVCGENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 (STRAIN CR326) PPOLG_HPAVGGENOME POLYPROTEIN HEPATITIS A VIRUS 778-798 (STRAIN GA76) PPOLG_HPAVHGENOME POLYPROTEIN HEPATITIS A VIRUS 799-819 1195-1210 1688-17092009-2034 2069-2093 (STRAIN HM-175) PPOLG_HPAVL GENOME POLYPROTEINHEPATITIS A VIRUS 799-819 1195-1210 1688-1709 2009-2034 2069-2093(STRAIN LA) PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS 799-8191195-1210 1688-1709 2009-2034 2069-2093 (STRAIN MBB) PPOLG_HPAVS GENOMEPOLYPROTEIN SIMIAN HEPATITIS A VIRUS 1199-1214 1690-1711 2012-20372072-2096 (STRAIN AGM-27) PPOLG_HRV14 GENOME POLYPROTEIN HUMANRHINOVIRUS 14 (HRV-14) 1383-1406 1962-1982 PPOLG_HRV1A GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 1A (HRV-1A) 361-379 547-562 PPOLG_HRV1BGENOME POLYPROTEIN HUMAN RHINOVIRUS 1B (HRV-1B) 386-404 572-587 859-8761029-1052 1453-1478 1625-1641 1816-1842 1941-1961 PPOLG_HRV2 GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 569-584 694-713 1022-10451446-1469 1618-1634 1809-1835 1843-1866 PPOLG_HRV89 GENOME POLYPROTEINHUMAN RHINOVIRUS 89 (HRV-89) 576-591 1038-1061 1229-1253 1332-13581460-1485 1632-1648 1823-1849 1948-1968 PPOLG_HUBV7 GENOME POLYPROTEINHUMAN RHINOVIRUS 70 1492-1515 (STRAIN J670/71) PPOLG_IBDVO STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL 905-922 DISEASE VIRUS (STRAIN OH)PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-9631306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN SA-14)PPOLG_JAEV5 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-9631306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN SA(V))PPOLG_JAEVJ GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 938-9631306-1325 1642-1658 2245-2270 2326-2351 2462-2481 (STRAIN JAOARS982)PPOLG_JAEVN GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 866-8911234-1253 (STRAIN NAKAYAMA) PPOLG_KUNJM GENOME POLYPROTEIN KUNJIN VIRUS(STRAIN MRM61C) 561-576 935-960 1307-1326 1643-1659 2246-2271 2327-23522440-2460 2463-2483 2641-2658 2798-2814 PPOLG_LANVT GENOME POLYPROTEINLANGAT VIRUS (STRAIN TP21) 67-89 527-551 736-756 835-862 1157-11781519-1544 1630-1653 2158-2182 2230-2257 2366-2387 2424-2451 2766-2784PPOLG_LANVY GENOME POLYPROTEIN LANGAT VIRUS (STRAIN 67-89 527-551YELANTSEV) PPOLG_LIV GENOME POLYPROTEIN LOUPING ILL VIRUS (L1) 67-89527-551 835-862 PPOLG_LIVSB GENOME POLYPROTEIN LOUPING ILL VIRUS (STRAIN247-271 SB 526) PPOLG_MCFA GENOME POLYPROTEIN MOSQUITO CELL FUSING AGENT120-137 1174-1199 1402-1428 1788-1805 1872-1887 2012-2029 2810-2827 (CFAFLAVIVIRUS) PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS 39-56PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS 331-347 563-578937-962 1305-1324 1523-1548 1585-1602 1641-1657 VIRUS PPOLG_OMV GENOMEPOLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 90-110 111-126 678-696 898-914PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS 690-717 826-8461009-1034 1301-1348 1455-1482 1484-1500 1676-1697 1921-1945 2002-2022(CALIFORNIA ISOLATE) PPOLG_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE 11409-1432 (STRAIN MAHONEY) PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUSTYPE 1 1410-1433 (STRAIN SABIN) PPOLG_POL2L GENOME POLYPROTEINPOLIOVIRUS TYPE 2 1408-1431 (STRAIN LANSING) PPOLG_POL2W GENOMEPOLYPROTEIN POLIOVIRUS TYPE 2 1408-1431 (STRAIN W-2) PPOLG_POL32 GENOMEPOLYPROTEIN POLIOVIRUS TYPE 3 577-594 1407-1430 (STRAIN 23127)PPOLG_POL3L GENOME POLYPROTEIN POLIOVIRUS TYPE 3 577-594 1407-1430(STRAINS P3/LEON/37 AND P3/LEON 12A[1]B) PPOLG_PPVD GENOME POLYPROTEINPLUM POX POTYVIRUS 153-178 551-571 714-741 1098-1115 1468-1495 1497-15132606-2624 3084-3106 (STRAIN D) PPOLG_PPVEA GENOME POLYPROTEIN PLUM POXPOTYVIRUS 981-999 1461-1483 (STRAIN EL AMAR) PPOLG_PPVNA GENOMEPOLYPROTEIN PLUM POX POTYVIRUS 153-178 713-740 1097-1114 1467-14941496-1512 2605-2623 3068-3090 (ISOLATE NAT) PPOLG_PPVRA GENOMEPOLYPROTEIN PLUM POX POTYVIRUS 153-178 713-740 1097-1114 1467-14941496-1512 2605-2623 3083-3105 (STRAIN RANKOVIC) PPOLG_PRSVH GENOMEPOLYPROTEIN PAPAYA RINGSPOT VIRUS 272-290 (STRAIN P/MUTANT HA)PPOLG_PRSVP GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS 163-181 (STRAINP/MUTANT HA-5-1) PPOLG_PRSVW GENOME POLYPROTEIN PAPAYA RINGSPOT VIRUS163-181 (STRAIN W) PPOLG_PSBMV GENOME POLYPROTEIN PEA SEED-BORNE MOSAICVIRUS 47-62 251-268 339-357 654-674 981-1001 1411-1428 1565-15922708-2726 (STRAIN DPD1) PPOLG_PVYC GENOME POLYPROTEIN POTATO VIRUS Y(STRAIN C) 755-776 PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y 755-776964-982 1010-1036 1109-1125 1456-1483 1485-1501 1677-1698 1922-19462588-2606 (STRAIN HUNGARIAN) 3004-3026 PPOLG_PVYN GENOME POLYPROTEINPOTATO VIRUS Y (STRAIN N) 755-776 964-982 1010-1036 1109-1125 1456-14831485-1501 1677-1698 1922-1946 2590-2608 PPOLG_PVYO GENOME POLYPROTEINPOTATO VIRUS Y (STRAIN O) 755-776 PPOLG_PYFV1 GENOME POLYPROTEIN PARSNIPYELLOW FLECK VIRUS 592-616 1326-1353 1626-1651 1903-1924 2621-26422702-2729 2766-2783 (ISOLATE P-121) PPOLG_STEVM GENOME POLYPROTEIN STLOUIS ENCEPHALITIS VIRUS 1301-1324 (STRAIN MS1-7) PPOLG_SUMVS GENOMEPOLYPROTEIN SUGARCANE MOSAIC VIRUS 39-56 (STRAIN SC) PPOLG_SVDVH GENOMEPOLYPROTEIN SWINE VESICULAR DISEASE 1475-1501 1585-1610 VIRUS (STRAINH/3 '76) PPOLG_SVDVU GENOME POLYPROTEIN SWINE VESICULAR DISEASE1475-1501 1585-1610 VIRUS (STRAIN UKG/27/72) PPOLG_TBEVS GENOMEPOLYPROTEIN TICK-BORNE ENCEPHALITIS 67-89 527-551 1363-1378 1519-15441630-1653 1740-1761 2230-2257 2366-2387 2765-2783 VIRUS (STRAIN SOFJIN)PPOLG_TBEVW GENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS 67-89 527-551835-862 1519-1544 1630-1653 2230-2257 2366-2387 2766-2784 VIRUS (WESTERNSUBTYPE) PPLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS (TEV) 827-853953-980 1016-1042 1114-1130 1307-1324 1490-1506 PPOLG_TMEVB GENOMEPOLYPROTEIN THEILER'S MURINE 924-941 1074-1095 1119-1140 1520-15461658-1677 ENCEPHALOMYELITIS VIRUS (STRAIN BEAN 8386) PPOLG_TMEVD GENOMEPOLYPROTEIN THEILER'S MURINE 1072-1093 1117-1138 1518-1544 1656-1675ENCEPHALOMYELITIS VIRUS (STRAIN DA) PPOLG_TMEVG GENOME POLYPROTEINTHEILER'S MURINE 645-670 924-941 1074-1095 1119-1140 1520-1546 1658-1677ENCEPHALOMYELITIS VIRUS (STRAIN GDV11) PPOLG_TUMV GENOME POLYPROTEINTURNIP MOSAIC VIRUS 23-39 970-991 1138-1156 1573-1595 PPOLG_TVMV GENOMEPOLYPROTEIN TOBACCO VEIN MOTTLING VIRUS 404-428 497-517 660-687 850-866967-992 1257-1274 2537-2562 PPOLG_WMV2 GENOME POLYPROTEIN WATERMELONMOSAIC VIRUS II 198-218 PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS557-572 931-956 1303-1322 1639-1655 2240-2267 2324-2349 2437-24572638-2655 2795-2811 PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS74-95 1157-1179 1228-1248 1385-1405 1495-1511 1625-1641 1761-17782229-2254 (STRAIN 17D) PPOLG_YEFV2 GENOME POLYPROTEIN YELLOW FEVER VIRUS74-95 1157-1179 1228-1248 1385-1405 1495-1511 1625-1641 1761-17782229-2254 (STRAIN PASTEUR 17D-204) PPOLG_YEFV8 GENOME POLYPROTEIN YELLOWFEVER VIRUS 74-95 (STRAIN 1899/81) PPOLH_POL1M GENOME POLYPROTEINPOLIOVIRUS TYPE 1 1410-1433 (STRAIN MAHONEY) PPOLN_EEVVT NONSTRUCTURALVENEZUELAN EQUINE 90-107 235-254 613-634 1001-1018 1153-1178 1923-19392129-2144 2201-2221 POLYPROTEIN ENCEPHALITIS VIRUS (STRAIN TRINIDAD DON)PPOLN_FCVC6 NON-STRUCTURAL FELINE CACICIVIRUS (STRAIN 443-469 748-766902-923 1069-1088 POLYPROTEIN CF1/68 FIV) PPOLN_FCVF4 NON-STRUCTURALFELINE CACICIVIRUS (STRAIN 300-326 POLYPROTEIN JAPANESE F4) PPOLN_FCVF9NON-STRUCTURAL FELINE CACICIVIRUS (STRAIN F9) 171-186 262-283 919-9451224-1242 1378-1399 1545-1564 POLYPROTEIN PPOLN_HEVBU NON-STRUCTURALHEPATITIS E VIRUS (STRAIN 250-266 1274-1291 POLYPROTEIN BURMA)PPOLN_HEVME NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN 250-266 1272-1289POLYPROTEIN MEXICO) PPOLN_HEVMY NON-STRUCTURAL HEPATITIS E VIRUS (STRAIN250-266 1274-1291 POLYPROTEIN MYANMAR) PPOLN_HEVPA NON-STRUCTURALHEPATITIS E VIRUS (STRAIN 249-265 1273-1290 POLYPROTEIN PAKISTAN)PPOLN_MIDDV NONSTRUCTURAL MIDDELBURG VIRUS 488-512 628-643 700-720POLYPROTEIN PPOLN_ONNVG NONSTRUCTURAL O'NYONG-NYONG VIRUS 90-107 613-6342148-2163 2220-2240 POLYPROTEIN (STRAIN GULU) PPOLN_RHDV NON-STRUCTURALRABBIT HEMORRHAGIC DISEASE 156-180 270-292 299-320 479-502 1330-13531429-1455 1471-1490 POLYPROTEIN VIRUS PPOLN_RHDV3 NON-STRUCTURAL RABBITHEMORRHAGIC DISEASE 115-135 POLYPROTEIN VIRUS (STRAIN V-351) PPOLN_RRVNNONSTRUCTURAL ROSS RIVER VIRUS 89-106 611-632 2113-2128 2185-2205POLYPROTEIN (STRAIN NB5092) PPOLN_RRVT NONSTRUCTURAL ROSS RIVER VIRUS782-797 854-874 POLYPROTEIN (STRAIN T48) PPOLN_RUBVT NONSTRUCTURALRUBELLA VIRUS (STRAIN 14-37 97-113 263-279 670-694 901-918 1374-13932035-2052 POLYPROTEIN THERIEN) PPOLN_SFV NONSTRUCTURAL SEMLIKI FORESTVIRUS 91-108 617-643 2062-2077 2134-2154 POLYPROTEIN PPOLN_SINDONONSTRUCTURAL SINDBIS VIRUS (SUBTYPE 620-646 1123-1150 1790-18142148-3163 2220-2240 POLYPROTEIN OCKELBO/STRAIN EDSBYN 82-5) PPOLN_SINDVNONSTRUCTURAL SINDBIS VIRUS (STRAIN HRSP) 620-646 1123-1150 1744-17631790-1812 2146-2161 2218-2238 POLYPROTEIN PPOLR_EPMV RNA REPLICASEEGGPLANT MOSAIC VIRUS 808-833 POLYPROTEIN PPOLR_OYMV RNA REPLICASEONONIS YELLOW MOSAIC VIRUS 707-727 941-962 POLYPROTEIN PPOLR_TYMV RNAREPLICASE TURNIP YELLOW MOSAIC VIRUS 212-233 436-453 1173-1192POLYPROTEIN PPOLR_TYMVA RNA REPLICASE TURNIP YELLOW MOSAIC VIRUS 212-233436-453 1173-1192 POLYPROTEIN (AUSTRALIAN ISOLATE) PPOLR_TYMVC RNAREPLICASE TURNIP YELLOW MOSAIC VIRUS 212-233 436-453 1173-1192POLYPROTEIN (ISOLATE TYMC) PPOLS_EEEV STRUCTURAL POLYPROTEIN EASTEREQUINE ENCEPHALITIS 35-50 213-229 491-507 VIRUS PPOLS_EEEV3 STRUCTURALPOLYPROTEIN EASTER EQUINE ENCEPHALITIS 35-50 214-230 492-508 VIRUSPPOLS_EEVV8 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINE 32-48 229-245504-522 ENCEPHALITIS VIRUS (STRAIN TC-83) PPOLS_EEVVT STRUCTURALPOLYPROTEIN VENEZUELAN EQUINE 32-48 229-245 504-522 ENCEPHALITIS VIRUS(STRAIN TRINIDAD DON) PPOLS_IBVD5 STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN 52/70) PPOLS_IBDVASTRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 900-922 DISEASE VIRUS(STRAIN AUSTRALIAN 00) PPOLS_IBDVC STRUCTURAL POLYPROTEIN AVIANINFECTIOUS BURSAL 900-922 DISEASE VIRUS (STRAIN CU-1) PPOLS_IBDVPSTRUCTURAL POLYPROTEIN AVIAN INFECTIOUS BURSAL 881-903 DISEASE VIRUS(STRAIN PBG-98) PPOLS_IBDVS STRUCTURAL POLYPROTEIN AVIAN INFECTIOUSBURSAL 900-922 DISEASE VIRUS (STRAIN STC) PPOLS_ONNVG STRUCTURALPOLYPROTEIN O'NYONG-NYONG VIRUS 688-708 (STRAIN GULU) PPOLS_RRVTSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) 1216-1243PPOLS_RUBVH STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE 281-302 STRAINHPV77) PPOLS_RUBVM STRUCTURAL POLYPROTEIN RUBELLA VIRUS (STRAIN M33)280-301 PPOLS_RUBVR STRUCTURAL POLYPROTEIN RUBELLA VIRUS (VACCINE281-302 STRAIN RA27/3) PPOLS_RUBVT STRUCTURAL POLYPROTEIN RUBELLA VIRUS(STRAIN 281-302 1041-1060 THERIEN) PPOLS_SFV STRUCTURAL POLYPROTEINSEMLIKI FOREST VIRUS 35-59 751-772 780-801 PPOLS_SINDO STRUCTURALPOLYPROTEIN SINDBIS VIRUS (SUBTYPE 33-52 OCKELBO/STRAIN EDSBYN 82-5)PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBIS VIRUS (STRAIN 33-52 HRSP ANDHRLP) PPOLS_WEEV STRUCTURAL POLYPROTEIN WESTERN EQUINE 36-51 909-933ENCEPHALITIS VIRUS PPOL_AVIRE POL POLYPROTEIN AVIANRETICULOENDOTHELIOSIS 283-303 VIRUS PPOL_BAEVM POL POLYPROTEIN BABOONENDOGENOUS VIRUS 526-544 973-993 999-1019 1070-1091 (STRAIN M7)PPOL_BIV06 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY 101-119 742-768868-889 VIRUS (ISOLATE 106) PPOL_BIV27 POL POLYPROTEIN BOVINEIMMUNODEFICIENCY 101-119 742-768 868-889 VIRUS (ISOLATE 127) PPOL_BLVAUPOL POLYPROTEIN BOVINE LEUKEMIA VIRUS 487-504 (AUSTRALIAN ISOLATE)PPOL_BLVJ POL POLYPROTEIN BOVINE LEUKEMIA VIRUS 487-504 (REVERSETRANSCRIPTASE) (JAPANESE ISOLATE BLV-1) PPOL_CAEVC POL POLYPROTEINCAPRINE ARTHRITIS 393-419 656-671 ENCEPHALITIS VIRUS (STRAIN CORK)PPOL_CAMVC ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204380-407 471-494 (STRAIN CM-1841) PPOL_CAMVD ENZYMATIC POLYPROTEINCAULIFLOWER MOSAIC VIRUS 175-199 375-402 466-489 (STRAIN D/H) PPOL_CAMVEENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204 380-407 471-494(STRAIN BBC) PPOL_CAMVN ENZYMATIC POLYPROTEIN CAULIFLOWER MOSAIC VIRUS70-97 185-205 381-408 472-495 (STRAIN NY8153) PPOL_CAMVS ENZYMATICPOLYPROTEIN CAULIFLOWER MOSAIC VIRUS 184-204 380-407 471-494 (STRAINSTRASBOURG) PPOL_CERV ENZYMATIC POLYPROTEIN CARNATION ETCHED RING VIRUS161-186 455-478 PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE320-343 1286-1311 1606-1622 1641-1665 VIRUS PPOL_EIAV9 POL POLYPROTEINEQUINE INFECTIOUS ANEMIA 437-456 VIRUS (CLONE 1369) PPOL_EIAVC POLPOLYPROTEIN EQUINE INFECTIOUS ANEMIA 437-456 VIRUS (CLONE CL22)PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA 436-455 VIRUS(ISOLATE WYOMING) PPOL_FENV1 POL POLYPROTEIN FELINE ENDOGENOUS VIRUS383-401 856-876 ECE1 PPOL_FIVPE POL POLYPROTEIN FELINE IMMUNODEFICIENCY407-426 755-775 VIRUS (ISOLATE PETALUMA) PPOL_FIVSD POL POLYPROTEINFELINE IMMUNODEFICIENCY 407-426 755-775 VIRUS (ISOLATE SAN DIEGO)PPOL_FIVT2 POL POLYPROTEIN FELINE IMMUNODEFICIENCY 406-425 665-690755-775 1041-1060 VIRUS (ISOLATE TM2) PPOL_FMVD ENZYMATIC POLYPROTEINFIGWORT MOSAIC VIRUS 191-212 464-487 (STRAIN DXS) PPOL_FOAMV POLPOLYPROTEIN HUMAN SPUMARETROVIRUS 126-147 768-788 PPOL_GALV POLPOLYPROTEIN GIBBON APE LEUKEMIA VIRUS 59-80 971-991 1048-1071 PPOL_HTLIAPOL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330-346 TYPE I (STRAIN ATK)PPOL_HTLIC POL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS 330-346 TYPE I(CARIBBEAN ISOLATE) PPOL_HTLV2 POL POLYPROTEIN HUMAN T-CELL LEUKEMIAVIRUS 609-627 TYPE II PPOL_HV1A2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY860-887 VIRUS TYPE 1 (ARV2/SF2 ISOLATE) PPOL_HV1B1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY 635-660 872-899 VIRUS TYPE 1 (BH10 ISOLATE) PPOL_HV1B5POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 872-899 VIRUS TYPE 1 (BH5ISOLATE) PPOL_HV1BR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 872-899 VIRUSTYPE 1 (BRU ISOLATE) PPOL_HV1EL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY622-647 859-886 VIRUS TYPE 1 (ELI ISOLATE) PPOL_HV1H2 POL POLYPROTEINHUMAN IMMUNODEFICIENCY 860-887 VIRUS TYPE 1 (HXB2 ISOLATE) PPOL_HV1JRPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY 864-891 VIRUS TYPE 1 (JRCSFISOLATE) PPOL_HV1MA POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUSTYPE 1 (MAL ISOLATE) PPOL_HV1MN POL POLYPROTEIN HUMAN IMMUNODEFICIENCY863-890 VIRUS TYPE 1 (MN ISOLATE) PPOL_HV1N5 POL POLYPROTEIN HUMANIMMUNODEFICIENCY 623-648 860-887 VIRUS TYPE 1 (NEW YORK-5 ISOLATE)PPOL_HV1ND POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 622-647 859-886 VIRUSTYPE 1 (NDK ISOLATE) PPOL_HV1OY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY860-887 VIRUS TYPE 1 (OY1 ISOLATE) PPOL_HV1PV POL POLYPROTEIN HUMANIMMUNODEFICIENCY 635-660 872-899 VIRUS TYPE 1 (PV22 ISOLATE) PPOL_HV1RHPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUS TYPE 1 (RF/HATISOLATE) PPOL_HV1U4 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 859-886 VIRUSTYPE 1 (STRAIN UGANDAN/ISO) PPOL_HV1Z2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY 622-647 859-886 VIRUS TYPE 1 (Z2/CDC-Z34 ISOLATE)PPOL_HV1Z6 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 5-32 VIRUS TYPE 1(ZAIRE 6 ISOLATE) PPOL_HV2BE POL POLYPROTEIN HUMAN IMMUNODEFICIENCY379-406 907-934 VIRUS TYPE 2 (ISOLATE BEN) PPOL_HV2CA POL POLYPROTEINHUMAN IMMUNODEFICIENCY 886-913 VIRUS TYPE 2 (ISOLATE CAM2) PPOL_HV2D1POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 397-424 925-952 VIRUS TYPE 2(ISOLATE D194) PPOL_HV2D2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 907-934VIRUS TYPE 2 (ISOLATE D205.7) PPOL_HV2G1 POL POLYPROTEIN HUMANIMMUNODEFICIENCY 359-386 887-914 VIRUS TYPE 2 (ISOLATE GHANA-1)PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY 543-564 771-792887-914 VIRUS TYPE 2 (ISOLATE NIH-Z) PPOL_HV2RO POL POLYPROTEIN HUMANIMMUNODEFICIENCY 888-915 VIRUS TYPE 2 (ISOLATE ROD) PPOL_HV2SB POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY 359-386 887-907 VIRUS TYPE 2 (ISOLATESBLISY) PPOL_IPHA PUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL166-190 198-225 460-477 A-PARTICLE PPOL_IPMA PUTATIVE POL POLYPROTEINMOUSE INTRACISTERNAL 183-201 209-236 506-523 531-552 769-789 A-PARTICLEPPOL_IPMAI PROBABLE MOUSE INTRACISTERNAL 102-120 128-155 407-423 425-442POL POLYPROTEIN A-PARTICLE PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY186-213 507-526 660-679 ADENOMATOSIS VIRUS (JAAGSIEKTE SHEEP RETPPOL_MCFF3 POL POLYPROTEIN MINK CELL FOCUS-FORMING 37-53 MURINE LEUKEMIAVIRUS (ISOLATE C1- PPOL_MLVAK POL POLYPROTEIN AKR MURINE LEUKEMIA VIRUS651-671 728-744 PPOL_MLVAV POL POLYPROTEIN AKV MURINE LEUKEMIA VIRUS335-354 978-998 1004-1024 1081-1097 PPOL_MLVCB POL PROTEIN CAS-BR-EMURINE LEUKEMIA 64-84 90-110 167-183 VIRUS PPOL_MLVF5 POL POLYPROTEINFRIEND MURINE LEUKEMIA 340-359 983-1003 1009-1029 1086-1102 VIRUS(ISOLATE 57) PPOL_MLVFF POL POLYPROTEIN FRIEND MURINE LEUKEMIA 340-359983-1003 1009-1029 1086-1102 VIRUS (ISOLATE FB29) PPOL_MLVFP POLPOLYPROTEIN FRIEND MURINE LEUKEMIA 340-359 983-1003 1009-1029 1086-1102VIRUS (ISOLATE PVC-211) PPOL_MLVMO POL POLYPROTEIN MOLONEY MURINELEUKEMIA 335-354 978-998 VIRUS PPOL_MLVRD POL POLYPROTEIN RADIATIONMURINE LEUKEMIA 335-354 978-998 1004-1024 1081-1097 VIRUS PPOL_MLVRK POLPOLYPROTEIN RADIATION MURINE LEUKEMIA 363-383 389-409 466-482 VIRUS(STRAIN KAPLAN) PPOL_MMTVB POL POLYPROTEIN MOUSE MAMMARY TUMOR 196-219731-751 VIRUS (STRAIN BR6) PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER743-763 VIRUS PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS 369-395469-488 632-647 1045-1063 (STRAIN SA-OMVV) PPOL_RSVP POL POLYPROTEINROUS SARCOMA VIRUS 719-742 (STRAIN PRAGUE C) PPOL_RTBV POLYPROTEIN RICETUNGRO BACILLIFORM 891-915 1058-1083 VIRUS (RTBV) PPOL_RTBVP POLYPROTEINRICE TUNGRO BACILLIFORM 891-915 1058-1083 VIRUS (ISOLATE PHILIPPINES)PPOL_SFV1 POL POLYPROTEIN SIMIAN FOAMY VIRUS (TYPE 1) 188-204 335-356845-869 976-996 PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMY VIRUS 186-206337-358 847-871 978-998 (TYPE 3/STRAIN LK3) PPOL_SIVA1 POL POLYPROTEINSIMIAN IMMUNODEFICIENCY 895-915 VIRUS (AGM155 ISOLATE) PPOL_SIVAG POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 711-726 900-920 VIRUS (AGM3 ISOLATE)PPOL_SIVA1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 899-926 VIRUS(ISOLATE AGM/CLONE GRI-1) PPOL_SIVAT POL POLYPROTEIN SIMIANIMMUNODEFICIENCY 726-741 915-935 VIRUS (TYO-1 ISOLATE) PPOL_SIVCZ POLPOLYPROTEIN CHIMPANZEE 884-911 IMMUNODEFICIENCY VIRUS PPOL_SIVGB POLPOLYPROTEIN SIMIAN IMMUNODEFICIENCY 680-695 869-896 VIRUS (ISOLATE GB1)PPOL_SIVM1 POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 380-407 908-935 VIRUS(MM142-83 ISOLATE) PPOL_SIVMK POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY380-407 712-737 906-933 VIRUS (K6W ISOLATE) PPOL_SIVS4 POL POLYPROTEINSIMIAN IMMUNODEFICIENCY 343-370 871-898 VIRUS (F236/SMH4 ISOLATE)PPOL_SIVSP POL POLYPROTEIN SIMIAN IMMUNODEFICIENCY 346-373 874-901 VIRUS(PBJ/BC13 ISOLATE) PPOL_SMRVH POL POLYPROTEIN SQUIRREL MONKEY RETROVIRUS748-768 PPOL_SMSAV POL POLYPROTEIN SIMIAN SARCOMA VIRUS 100-120 177-200PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE 131-155 VIRUSPPOL_SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS 743-763 PPOL_VILV POLPOLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514) 488-507 651-666 971-991PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514/ 488-507651-666 971-991 CLONE LV1-IKS1) PPOL_VILV2 POL POLYPROTEIN VISNALENTIVIRUS (STRAIN 1514/ 488-507 651-666 971-991 CLONE LV1-IKS2)PPP15_HCMVA LARGE STRUCTURAL HUMAN CYTOMEGALOVIRUS 153-171 183-210PHOSPHOPROTEIN PP150 (STRAIN AD169) PPP28_HCMVA 28 KD STRUCTURAL HUMANCYTOMEGALOVIRUS 116-141 PHOSPHOPROTEIN (STRAIN AD169) PPP41_HSV6GPHOSPHOPROTEIN P41 HERPES SIMPLEX VIRUS 158-175 396-411 (TYPE 6/STRAINGS) PPP65_HCMVA 65 KD LOWER MATRIX HUMAN CYTOMEGALOVIRUS 311-333PHOSPHOPROTEIN (STRAIN AD169) PPP65_HCMVT 64 KD LOWER MATRIX HUMANCYTOMEGALOVIRUS 301-323 PHOSPHOPROTEIN (STRAIN TOWNE) PPP71_HCMVA 71 KDUPPER MATRIX HUMAN CYTOMEGALOVIRUS 79-102 PHOSPHOPROTEIN (STRAIN AD169)PPR73_MMTVB PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN BR6)PPR73_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN GR)PPR7L_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 44-65 VIRUS (STRAIN GR)PPR7R_MMTVG PROTEIN PR73 MOUSE MAMMARY TUMOR 40-61 VIRUS (STRAIN GR)PRASH_MSVHA TRANSFORMING PROTEINS HARVEY MURINE SARCOMA 49-73 P21 ANDP29 VIRUS PRASH_RRASV TRANSFORMING PROTEINS RASHEED RAT SARCOMA VIRUS56-80 P21 AND P29 PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETIS SONORENSISVIRUS 14-36 PREFR_VACCV RIFAMPICIN RESISTANCE VACCINIA VIRUS (STRAINWR), 274-298 316-335 517-535 PROTEIN AND (STRAIN COPENHAGEN) PREFR_VARVRIFAMPICIN RESISTANCE VARIOLA VIRUS 274-298 316-335 517-535 PROTEINPREV_SIVAG REV PROTEIN SIMIAN IMMUNODEFICIENCY 2-17 VIRUS (AGM3 ISOLATE)PREV_SIVGB REV PROTEIN SIMIAN IMMUNODEFICIENCY 45-72 VIRUS (ISOLATE GB1)PRIR1_ASFM2 RIBONUCLEOSIDE- AFRICAN SWINE FEVER VIRUS 139-164 189-210495-510 DIPHOSPHATE REDUCTASE (ISOLATE MALAWI LIL 20/1) PRIR1_EBVRIBONUCLEOTIDE EPSTEIN-BARR VIRUS 793-812 REDUCTASE (STRAIN B95-8)PRIR1_HCMVA RIBONUCLEOTIDE HUMAN CYTOMEGALOVIRUS 192-212 669-684REDUCTASE (STRAIN AD169) PRIR1_HSV11 RIBONUCLEOTIDE HERPES SIMPLEX VIRUS415-430 587-613 REDUCTASE (TYPE 1/STRAIN 17) PRIR1_HSVEB RIBONUCLEOTIDEEQUINE HERPESVIRUS TYPE 1 60-85 266-288 668-694 REDUCTASE (STRAIN AB4P)PRIR1_HSVSA RIBONUCLEOTIDE HERPESVIRUS SAIMIRI 136-151 REDUCTASE (STRAIN11) PRIR1_VACCC RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN 36-51 REDUCTASECOPENHAGEN) PRIR1_VACCV RIBONUCLEOTIDE VACCINIA VIRUS (STRAIN WR) 36-51REDUCTASE PRIR1_VARV RIBONUCLEOTIDE VARIOLA VIRUS 36-51 REDUCTASEPRIR1_VZVD RIBONUCLEOTIDE VARICELLA-ZOSTER VIRUS 34-58 221-247 258-280REDUCTASE (STRAIN DUMAS) PRIR2_EBV RIBONUCLEOTIDE EPSTEIN-BARR VIRUS209-236 REDUCTASE (STRAIN B95-8) PRIR2_HSV11 RIBONUCLEOTIDE HERPESSIMPLEX VIRUS 44-66 275-292 REDUCTASE (TYPE 1/STRAIN 17) PRIR2_HSVIKRIBONUCLEOTIDE HERPES SIMPLEX VIRUS 43-65 245-261 274-291 REDUCTASE(TYPE 1/STRAIN KOS) PRIR2_HSV23 RIBONUCLEOTIDE HERPES SIMPLEX VIRUS41-63 272-289 REDUCTASE (TYPE 2/STRAIN 333) PRIR2_HSVB3 RIBONUCLEOTIDEBOVINE HERPESVIRUS TYPE 1 244-266 REDUCTASE (STRAIN 34) PRIR2_HSVEBRIBONUCLEOTIDE EQUINE HERPESVIRUS TYPE 1 61-88 251-273 REDUCTASE (STRAINAB4P) PRIR2_HSVSA RIBONUCLEOTIDE HERPESVIRUS SAIMIRI (STRAIN 11) 212-239REDUCTASE PRIR2_SFVKA RIBONUCLEOTIDE SHOPE FIBROMA VIRUS 184-206 215-237REDUCTASE (STRAIN KASZA) PRIR2_VACCC RIBONUCLEOTIDE VACCINIA VIRUS(STRAIN 184-206 REDUCTASE COPENHAGEN) PRIR2_VACCP RIBONUCLEOTIDEVACCINIA VIRUS (STRAIN L-IVP) 184-206 REDUCTASE PRIR2_VACCVRIBONUCLEOTIDE VACCINIA VIRUS (STRAIN WR) 184-206 REDUCTASE PRIR2_VARVRIBONUCLEOTIDE VARIOLA VIRUS 184-206 215-237 REDUCTASE PRIR2_VZVDRIBONUCLEOTIDE VARICELLA-ZOSTER VIRUS 237-258 REDUCTASE (STRAIN DUMAS)PRMIL_AVEVR RMIL SER/THR-PROTEIN AVIAN ROUS-ASSOCIATED VIRUS 380-405KINASE TRANSFORMING P TYPE 1 PRP94_VACCV RNA-POL-ASSOCIATED VACCINIAVIRUS (STRAIN WR), 173-189 265-290 371-394 561-578 TRANSCRIPTION AND(STRAIN COPENHAGEN) SPEC FACT PRP94_VARV RNA-POL-ASSOCIATED VARIOLAVIRUS 173-189 265-290 371-394 561-578 TRANSCRIPTION AND (STRAINCOPENHAGEN) SPEC FACT PRPO1_VACCC DNA-DIRECTED RNA VACCINIA VIRUS(STRAIN 76-96 304-329 848-871 1005-1032 POLYMERASE 147 KD POLYPECOPENHAGEN) PRPO1_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR)76-96 304-329 848-871 POLMERASE 147 KD POLYPE PRPO1_VARV DNA-DIRECTEDRNA POL 147 VARIOLA VIRUS 76-96 304-329 848-871 1005-1032 KD POLYPEPRPO2_CAPVK DNA-DIRECTED RNA CAPRIPOXVIRUS (STRAIN KS-1) 12-29 477-498POLYMERASE 132 KD POLYPE PRPO2_COWPX DNA-DIRECTED RNA COWPOX VIRUS150-170 258-274 480-505 POLYMERASE 132 KD POLYPE PRPO2_VACCVDNA-DIRECTED RNA VACCINIA VIRUS (STRAIN WR), 150-170 258-274 480-505POLYMERASE 132 KD AND (STRAIN COPENHAGEN) POLYPE PRPO2_VARV DNA-DIRECTEDRNA VARIOLA VIRUS 150-170 258-274 480-505 POLYMERASE 132 KD POLYPEPPRPO4_VACCC DNA-DIRECTED RNA VACCINIA VIRUS (STRAIN 33-48 POLYMERASE 35KD COPENHAGEN) POLYPEP PRPO4_VACCV DNA-DIRECTED RNA VACCINAI VIRUS(STRAIN WR) 33-48 POLYMERASE 35 KD POLYPEP PRPO4_VARV DNA-DIRECTED RNAVARIOLA VIRUS 33-55 POLYMERASE 35 KD POLYPEP PRPO6_VACCV DNA-DIRECTEDRNA VACCINIA VIRUS (STRAIN WR), 38-59 POLYMERASE 19 KD AND (STRAINCOPENHAGEN) POLYPEP PRPO7_VACCV DNA-DIRECTED RNA VACCINIA VIRUS (STRAINWR), 38-59 POLYMERASE 19 KD AND (STRAIN COPENHAGEN) POLYPEP PRPO7_VARVDNA-DIRECTED RNA VARIOLA VIRUS 38-59 POLYMERASE 19 KD POLYPEPPRPO8_FOWP1 DNA-DIRECTED RNA FOWLPOX VIRUS (STRAIN FP-1) 57-81POLYMERASE 18 KD POLYPEP PRPOA_LELV RNA-DIRECTED RNA LELYSTAD VIRUS175-197 707-729 1164-1180 1233-1258 1513-1530 1531-1546 1955-19772320-2343 2802-2823 POLYMERASE 3133-3156 PRPOL_EAV RNA-DIRECTED RNAEQUINE ARTERITIS VIRUS 97-118 602-617 754-774 825-851 2530-25533041-3068 POLYMERASE PRRP1_DHVI1 RNA-DIRECTED RNA DHORI VIRUS (STRAIN247-264 275-299 337-359 377-394 569-594 POLYMERASE SUBUNIT P1INDIAN/1313/61) PRRP1_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN244-262 POLYMERASE SUBUNIT P1 A/ANN ARBOR/6/60) PRRP1_IABEI RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/BEIJING/11/56) PRRP1_IADUN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN244-262 POLYMERASE SUBUNIT P1 A/DUNEDIN/4/73) PRRP1_IAGU2 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/GULL/MARYLAND/704/77) PRRP1_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 244-262 POLYMERASE SUBUNIT P1 A/EQUINE/LONDON/1416/73)PRRP1_IAHTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262POLYMERASE SUBUNIT P1 A/EQUINE/TENNESSEE/5/86) PRRP1_IAKIE RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/KIEV/59/79) PRRP1_IAKOR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN244-262 POLYMERASE SUBUNIT P1 A/KOREA/426/68) PRRP1_IALE1 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/LENINGRAD/134/57) PRRP1_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 244-262 POLYMERASE SUBUNIT P1 A/LENINGRAD/134/17/57) PRRP1_IALE3RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/LENINGRAD/134/47/57) PRRP1_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 244-262 POLYMERASE SUBUNIT P1 A/MALLARD/NEW YORK/6750/78)PRRP1_IAME8 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262POLYMERASE SUBUNIT P1 A/MEMPHIS 8/88) PRRP1_IANT6 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/NT/60/68)PRRP1_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262POLYMERASE SUBUNIT P1 A/PUERTO RICO/8/34) PRRP1_IASIN RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/SINGAPORE/1/57) PRRP1_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN244-262 POLYMERASE SUBUNIT P1 A/TURKEY/MINNESOTA/833/80) PRRP1_IAVI7RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 138-163 244-262 POLYMERASESUBUNIT P1 A/VICTORIA/3/75) PRRP1_IAWIL RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/WILSON-SMITH/33)PRRP1_IAWIS RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262POLYMERASE SUBUNIT P1 A/WISCONSIN/3523/88) PRRP1_IAZH3 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1 A/SWINE/HONGKONG/126/82) PRRP1_IAZON RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN244-262 POLYMERASE SUBUNIT P1 A/SWINE/ONTARIO/2/81) PRRP1_IAZTFRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 244-262 POLYMERASE SUBUNIT P1A/SWINE/TENNESSEE/26/77) PRRP1_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS(STRAIN 205-222 POLYMERASE SUBUNIT P1 B/ANN ARBOR/1/66 [COLD-ADAPTED])PRRP1_INBAD RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205-222POLYMERASE SUBUNIT P1 B/ANN ARBOR/1/66 [WILD-TYPE]) PRRP1_INBLERNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 205-222 POLYMERASE SUBUNIT P1B/LEE/40) PRRP1_INCJJ RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 317-341564-591 POLYMERASE SUBUNIT P1 C/JJ/50) PRRP2_IAANN RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/ANNARBOR/6/60) PRRP2_IADH2 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN534-557 POLYMERASE SUBUNIT P2 A/DUCK/HOKKAIDO/8/80) PRRP2_IAFPRRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP2_IAGU2 RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/GULL/MARYLAND/704/77)PRRP2_IAHLO RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557POLYMERASE SUBUNIT P2 A/EQUINE/LONDON/1416/73) PRRP2_IALE1 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2(A/LENINGRAD/134/57) PRRP2_IALE2 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 534-557 POLYMERASE SUBUNIT P2 A/LENINGRAD/134/17/57) PRRP2_IAP10RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2A/PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 534-557 POLYMERASE SUBUNIT P2 A/PUERTO RICO/8/34) PRRP2_IARUDRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2A/RUDDY TURNSTONE/NEW JERSEY/47/) PRRP2_IASIN RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SINGAPORE/1/57)PRRP2_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557POLYMERASE SUBUNIT P2 A/TURKEY/MINNESOTA/833/80) PRRP2_IAWILRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 68-86 534-557 POLYMERASESUBUNIT P2 A/WILSON-SMITH/33) PRRP2_IAZH2 RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2 A/SWINE/HONG KONG/81/78)PRRP2_IAZH3 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 534-557POLYMERASE SUBUNIT P2 A/SWINE/HONG KONG/126/82) PRRP2_IAZ11 RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 534-557 POLYMERASE SUBUNIT P2A/SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 530-557 POLYMERASE SUBUNIT P2 A/SWINE/TENNESSEE/26/77)PRRP2_INBAC RNA-DIRECTED RNA INFLUENZA B VIRUS (STRAIN 32-54 POLYMERASESUBUNIT P2 (B/ANN ARBOR/1/66 [COLD-ADAPTED]) PRRP2_INBAD RNA-DIRECTEDRNA INFLUENZA B VIRUS (STRAIN 32-54 POLYMERASE SUBUNIT P2 B/ANNARBOR/1/66 [WILD-TYPE]) PRRP2_INBSI RNA-DIRECTED RNA INFLUENZA B VIRUS(STRAIN 32-54 POLYMERASE SUBUNIT P2 B/SINGAPORE/222/79) PRRP2_INCJJRNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 406-425 POLYMERASE SUBUNIT P2C/JJ/50) PRRP3_IAANN RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234542-560 POLYMERASE SUBUNIT P3 A/ANN ARBOR/6/60) PRRP3_IABUD RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 219-234 POLYMERASE SUBUNIT P3A/BUDERIGAR/HOKKAIDO/1/77) PRRP3_IACHI RNA-DIRECTED RNA INFLUENZA AVIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/CHILE/1/83)PRRP3_IAFPR RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-567POLYMERASE SUBUNIT P3 A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PRRP3_IAFPWRNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASESUBUNIT P3 A/FOWL PLAGUE VIRUS/ WEYBRIDGE) PRRP3_IAGU2 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/GULL/MARYLAND/704/77) PRRP3_IAGUA RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/GULL/ASTRAKHAN/227/84)PRRP3_IAHK6 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560POLYMERASE SUBUNIT P3 A/EQUINE/KENTUCKY/2/86) PRRP3_IAHLO RNA-DIRECTEDRNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/EQUINE/LONDON/1416/73) PRRP3_IAHPR RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/EQUINE/PRAGUE/1/56)PRRP3_IAKIE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 542-560POLYMERASE SUBUNIT P3 A/KIEV/59/79) PRRP3_IAKOR RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/KOREA/426/68) PRRP3_IALE1 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN219-234 542-560 POLYMERASE SUBUNIT P3 A/LENINGRAD/134/57) PRRP3_IALE2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASESUBUNIT P3 A/LENINGRAD/134/17/57) PRRP3_IALE3 RNA-DIRECTED RNA INFLUENZAA VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/LENINGRAD/134/47/57) PRRP3_IAMAN RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/MALLARD/NEWYORK/6750/78) PRRP3_IAME8 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN219-234 542-560 POLYMERASE SUBUNIT P3 PRRP3_IANT6 RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/NT/60/68) PRRP3_IAPUE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN219-234 469-485 542-560 POLYMERASE SUBUNIT P3 A/PUERTO RICO/8/34)PRRP3_IARUD RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560POLYMERASE SUBUNIT P3 A/RUDDY TURNSTONE/ NEW JERSEY/47/) PRRP3_IASE2RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASESUBUNIT P3 A/SEAL/MASSACHUSETTS/133/82) PRRP3_IASIN RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/SINGAPORE/1/57) PRRP3_IATKM RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN219-234 542-560 POLYMERASE SUBUNIT P3 A/TURKEY/MINNESOTA/833/80)PRRP3_IAVI7 RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560POLYMERASE SUBUNIT P3 A/VICTORIA/3/75) PRRP3_IAWIL RNA-DIRECTED RNAINFLUENZA A VIRUS (STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3A/WILSON-SMITH/33) PRRP3_IAZI1 RNA-DIRECTED RNA INFLUENZA A VIRUS(STRAIN 219-234 542-560 POLYMERASE SUBUNIT P3 A/SWINE/IOWA/15/30)PRRP3_IAZTE RNA-DIRECTED RNA INFLUENZA A VIRUS (STRAIN 219-234 542-560POLYMERASE SUBUNIT P3 A/SWINE/TENNESSEE/24/77) PRRP3_INBAC RNA-DIRECTEDRNA INFLUENZA B VIRUS (STRAIN 71-86 535-561 POLYMERASE SUBUNIT P3 B/ANNARBOR/1/66 [COLD-ADAPTED]) PRRP3_INBAD RNA-DIRECTED RNA INFLUENZA BVIRUS (STRAIN 71-86 535-561 POLYMERASE SUBUNIT P3 B/ANN ARBOR/1/66[WILD-TYPE]) PRRP3_INCBE RNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN74-96 552-571 POLYMERASE SUBUNIT P3 C/BERLIN/1/85) PRRP3_INCJJRNA-DIRECTED RNA INFLUENZA C VIRUS (STRAIN 74-96 552-571 POLYMERASESUBUNIT P3 C/JJ/50) PRRP3_THOGV RNA-DIRECTED RNA THOGOTO VIRUS 85-101POL SUBUNIT P3 PRRPA_CVH22 RNA-DIRECTED RNA HUMAN CORONA VIRUS 82-104410-436 858-878 1482-1507 1523-1542 1543-1568 2125-2149 2974-29923537-3559 POLYMERASE (STRAIN 229E) PRRPA_CVMJD RNA-DIRECTED RNA MURINEHEPATITIS VIRUS 440-467 POLYMERASE (STRAIN DEFECTIVE JHM) PRRPA_CVMJHRNA-DIRECTED RNA MURINE CORONA VIRUS MHV 917-938 1188-1215 1338-13541422-1449 1461-1480 1567-1585 1783-1806 2165-2192 2337-2354 POLYMERASE(STRAIN JHM) 2470-2494 2660-2676 2944-2961 3229-3255 3405-3425 3933-3954PRRPB_BEV RNA-DIRECTED RNA BERNE VIRUS 806-832 1509-1527 1738-17572137-2154 POLYMERASE PRRPB_CVMA5 RNA-DIRECTED RNA MURINE CORONA VIRUSMHV 385-412 1302-1324 1835-1850 2698-2723 POLYMERASE (STRAIN A59)PRRPB_CVMJH RNA-DIRECTED RNA MURINE CORONA VIRUS MHV 385-412 746-7701302-1324 1833-1848 2696-2721 POLYMERASE (STRAIN JHM) PRRPB_CVPFSRNA-DIRECTED RNA PORCINE TRANSMISSIBLE 173-200 482-508 POLYMERASEGASTROENTERITIS CORONA- VIRUS (STRAI) PRRPB_CVPR8 RNA-DIRECTED RNAPORCINE RESPIRATORY 80-106 POLYMERASE CORONAVIRUS (STRAIN86/137004/BRITISH I) PRRPB_IBVB RNA-DIRECTED RNA AVIAN INFECTIOUSBRONCHITIS 140-164 338-365 887-911 1335-1352 1654-1674 POLYMERASE VIRUS(STRAIN BEAUDETTE) PRRPL_BVT10 RNA-DIRECTED RNA BLUETONGUE VIRUS 21-41146-161 POLYMERASE (SEROTYPE 10/ISOLATE USA) PRRPL_BUNYW RNA POLYMERASEBUNYAMWERA VIRUS 78-104 303-324 440-465 1096-1116 1317-1338 1343-13651539-1554 1869-1886 2001-2027 PRRPL_EBOV RNA-DIRECTED RNA EBOLA VIRUS16-31 POLYMERASE PRRPL_HANTV RNA POLYMERASE HANTAAN VIRUS (STRAIN76-118) 151-168 173-194 596-611 1561-1585 2081-2105 PRRPL_HRSV RNAPOLYMERASE BETA HUMAN RESPIRATORY 3-19 SUBUNIT SYNCYTIAL VIRUSPRRPL_HRSVA RNA POLYMERASE BETA HUMAN RESPIRATORY 3-19 1181-12061425-1447 1633-1653 1929-1948 2018-2037 SUBUNIT SYNCTIAL VIRUS (STRAINA2) PRRPL_MABVM RNA-DIRECTED RNA MARBURG VIRUS (STRAIN 15-30 144-169223-248 317-341 471-492 546-569 931-946 1042-1067 1410-1436 POLYMERASEMUSOKE) 1711-1731 1990-2017 2071-2094 PRRPL_MABVP RNA-DIRECTED RNAMARBURG VIRUS (STRAIN POPP) 15-30 144-169 223-248 471-492 546-569931-946 1042-1067 1410-1436 1677-1696 POLYMERASE 1715-1731 1805-18321990-2017 2071-2094 2223-2246 PRRPL_MEASE RNA POLYMERASE BETA MEASLESVIRUS (STRAIN 285-312 617-632 998-1023 1160-1185 1279-1304 1920-19402038-2063 SUBUNIT EDMONSTON) PRRPL_MUMPM RNA POLYMERASE BETA MUMPS VIRUS(STRAIN 43-66 110-135 265-280 962-988 1100-1124 1132-1153 1601-16222128-2143 SUBUNIT (MIYAHARA VACCINE) PRRPL_NDVB RNA POLYMERASE BETANEWCASTLE DISEASE VIRUS 704-724 1571-1592 1967-1994 2040-2067 SUBUNIT(STRAIN BEAUDETTE C/45) PRRPL_PI2HT RNA POLYMERASE BETA HUMANPARAINFLUENZA 2 VIRUS 109-124 268-291 308-334 1309-1335 1562-15881985-2010 2215-2234 SUBUNIT (STRAIN TOSHIBA) PRRPL_PI3H4 RNA POLYMERASEBETA HUMAN PARAINFLUENZA 3 VIRUS 172-193 304-330 844-861 885-9001848-1868 2068-2084 2111-2134 SUBUNIT (STRAIN NIH 47885) PRRPL_PUUMHRNA-DIRECTED RNA PUUMALA VIRUS (STRAIN 173-194 596-611 1561-15851677-1696 2086-2110 POLYMERASE HALLNAS B1) PRRPL_RABVP RNA POLYMERASEBETA RABIES VIRUS (STRAIN PV) 266-286 542-563 741-762 1446-14611492-1517 SUBUNIT PRRPL_RABVS RNA POLYMERASE BETA RABIES VIRUS (STRAINSAD B19) 266-286 542-563 741-762 1446-1461 1492-1461 1492-1517 1744-1761SUBUNIT PRRPL_RDV RNA-DIRECTED RNA RICE DWARF VIRUS 10-27 533-560680-697 1293-1316 POLYMERASE PRRPL_RVFVZ RNA-DIRECTED RNA RIFT VALLEYFEVER VIRUS 582-609 2009-2035 POLYMERASE (STRAIN ZH-548 M12) PRRPL_SEND5RNA POLYMERASE BETA SENDAI VIRUS (STRAIN Z/ 64-83 104-120 194-218844-861 885-900 1405-1420 1844-1864 2107-2128 SUBUNIT HOST MUTANTS)PRRPL_SENDE RNA POLYMERASE BETA SENDAI VIRUS (STRAIN ENDERS) 14-38664-681 705-720 1225-1240 1664-1684 1927-1948 SUBUNIT PRRPL_SENDZ RNAPOLYMERASE BETA SENDAI VIRUS (STRAIN Z) 64-83 104-120 194-218 844-861885-900 1405-1420 1844-1864 2107-2128 SUBUNIT PRRPL_SEOU8 RNA-DIRECTEDRNA SEOUL VIRUS (STRAIN 80-39) 151-168 173-194 394-419 596-611 1561-15852081-2105 POLYMERASE PRRPL_SV5WR RNA POLYMERASE BETA SIMIAN VIRUS 5(STRAIN 43-66 108-124 263-289 1094-1118 1125-1147 1558-1580 2117-2137SUBUNIT 21004-WR) PRRPL_SYNV RNA POLYMERASE BETA SONCHUS YELLOW NETVIRUS 126-146 391-406 605-627 704-731 863-883 886-911 1484-15101776-1792 SUBUNIT PRRPL_TSWVB RNA-DIRECTED RNA TOMATO SPOTTED WILT VIRUS958-974 1385-1410 1778-1800 2609-2627 2678-2702 POLYMERASE (BRAZILIANISOLATE CPNH1/BR-01) PRRPL_UUK RNA POLYMERASE UUKUNIEMI VIRUS 698-714923-948 1404-1431 1570-1591 2060-2081 PRRPL_VSVJH RNA POLYMERASE BETAVESICULAR STOMATITIS VIRUS 156-183 312-339 903-928 1956-1982 2080-2097SUBUNIT (SEROTYPE NEW JERSEY/ STRAIN HA) PRRPL_VSVJO RNA POLYMERASE BETAVESICULAR STOMATITIS VIRUS 156-183 312-339 1956-1982 2080-2101 SUBUNIT(SEROTYPE NEW JERSEY/ STRAIN OG) PRRPL_VSVSJ RNA POLYMERASE BETAVESICULAR STOMATITIS VIRUS 1956-1982 SUBUNIT (STRAIN SAN JUAN)PRRPO_ACLSV RNA-DIRECTED RNA APPLE CHLOROTIC LEAF 226-247 1036-10541132-1155 1775-1201 POLYMERASE SPOT VIRUS PRRPO_BWYVF PUTATIVERNA-DIRECTED BEET WESTERN YELLOWS VIRUS 299-326 RNA POL (ISOLATE FL-1)PRRPO_BYDV1 PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359-386391-416 505-532 RNA POL (ISOLATE MAV-PS1) PRRPO_BYDVP PUTATIVERNA-DIRECTED BARLEY YELLOW DWARF VIRUS 359-386 391-416 505-532 RNA POL(ISOLATE PAV) PRRPO_BYDVR PUTATIVE RNA-DIRECTED BARLEY YELLOW DWARFVIRUS 359-386 391-416 505-532 RNA POL (ISOLATE P-PAV) PRRPO_CARMVPROBABLE RNA-DIRECTED CARNATION MOTTLE VIRUS 4-30 92-107 327-350 818-833RNA POL PRRPO_CGMVS PUTATIVE RNA-DIRECTED CUCUMBER GREEN MOTTLE 443-466574-591 1017-1032 1523-1539 RNA POL MOSAIC VIRUS (WATERMELON STRAIN S)PRRPO_CNV PROBABLE RNA-DIRECTED CUCUMBER NECROSIS VIRUS 277-300 345-371470-494 RNA POL PRRPO_CRV PROBABLE RNA-DIRECTED CYMBIDIUM RINGSPOT VIRUS96-111 345-371 470-494 RNA POL PRRPO_IPNVJ PUTATIVE RNA-DIRECTEDINFECTIOUS PANCREATIC 221-238 RNA POL NECROSIS VIRUS (SEROTYPE JASPER)PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGI- 35-52 597-613659-682 988-1008 1234-1258 1770-1795 2077-2099 TIS VIRUS (STRAINARMSTRONG) PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGI- 35-52TIS VIRUS (STRAIN WE) PRRPO_MCMV PROBABLE RNA-DIRECTED MAIZE CHLOROTICMOTTLE 16-41 101-127 573-599 RNA POL VIRUS PRRPO_PEAMV RNA-DIRECTED RNAPEA ENATION MOSAIC VIRUS 144-161 316-336 431-456 558-574 POLYMERASEPRRPO_PLRV1 PUTATIVE RNA-DIRECTED POTATO LEAFROLL VIRUS 331-358 576-600RNA POL (STRAIN 1) PRRPO_PLRVW PUTATIVE RNA-DIRECTED POTATO LEAFROLLVIRUS 331-358 576-600 RNA POL (STRAIN WAGENINGEN) PRRPO_PPMVS PUTATIVERNA-DIRECTED PEPPER MILD MOTTLE VIRUS 375-395 702-726 1069-10961491-1507 RNA POL (STRAIN SPAIN) PRRPO_RCNMV PUTATIVE RNA-DIRECTED REDCLOVER NECROTIC 278-300 RNA POL MOSAIC VIRUS PRRPO_REOVJ RNA-DIRECTEDRNA REOVIRUS (TYPE 2/STRAIN 161-176 POLYMERASE D5/JONES) PRRPO_REOVLRNA-DIRECTED RNA REOVIRUS (TYPE 1/STRAIN LANG) 161-176 POLYMERASEPRRPO_ROTBR RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN RF) 132-156247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1 PRRPO_ROTBURNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN UK) 132-156 247-269 844-861904-921 942-967 1027-1046 SUBUNIT VP1 PRRPO_ROTPC RNA-DIRECTED RNAPORCINE ROTAVIRUS 198-223 254-274 318-337 769-784 856-878 936-952SUBUNIT VP1 (GROUP C/STRAIN COWDEN) PRRPO_ROTPG RNA-DIRECTED RNA PORCINEROTAVIRUS 32-53 57-72 132-156 247-269 844-861 904-921 942-967 1027-1046SUBUNIT VP1 (STRAIN GOTTFRIED) PRRPO_ROTS1 RNA-DIRECTED RNA SIMIAN 11ROTAVIRUS 132-156 247-269 844-861 904-921 942-967 1027-1046 SUBUNIT VP1(STRAIN SA11) PRRPO_SBMV PROBABLE RNA-DIRECTED SOUTHERN BEAN MOSAICVIRUS 38-64 122-143 188-206 287-302 444-466 625-643 825-846 RNA POLPRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 88-107 369-389 1281-13011676-1692 2019-2046 PRRPO_TBSVC PUTATIVE RNA-DIRECTED TOMATO BUSHY STUNTVIRUS 277-300 345-371 470-494 RNA POL (STRAIN CHERRY) PRRPO_TCV PUTATIVERNA-DIRECTED TURNIP CRINKLE VIRUS 31-58 241-263 RNA POL PRRPO_TMGMVPUTATIVE RNA-DIRECTED TOBACCO MILD GREEN MOSAIC 209-231 1085-1100 RNAPOL VIRUS (TMV STRAIN U2) PRRPO_TMV PUTATIVE RNA-DIRECTED TOBACCO MOSAICVIRUS 700-724 1090-1105 1587-1610 RNA POL (VULGARE) PRRPO_TMVKR PUTATIVERNA-DIRECTED TOBACCO MOSAIC VIRUS 700-724 1090-1105 1587-1610 RNA POL(STRAIN KOREAN) PRRPO_TMVTO PUTATIVE RNA-DIRECTED TOBACCO MOSAIC VIRUS700-724 1090-1105 1151-1170 1587-1610 RNA POL (STRAIN TOMATO/L)PRRPO_TNVA RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS 113-135 POLYMERASE(STRAIN A) PRRPO_TNVD RNA-DIRECTED RNA TOBACCO NECROSIS VIRUS 5-26POLYMERASE (STRAIN D) PRRPP_CHAV RNA POLYMERASE ALPHA CHANDIPURA VIRUS(STRAIN 124-146 SUBUNIT 1653514) PRRPP_MUMP1 RNA POLYMERASE ALPHA MUMPSVIRUS (STRAIN SBL-1) 211-238 SUBUNIT PRRPP_MUMPE RNA POLYMERASE ALPHAMUMPS VIRUS (STRAIN ENDERS) 212-239 SUBUNIT PRRPP_MUMPM RNA POLYMERASEALPHA MUMPS VIRUS (STRAIN 212-239 SUBUNIT MIYAHARA VACCINE) PRRPP_NDVARNA POLYMERASE ALPHA NEWCASTLE DISEASE VIRUS 256-276 SUBUNIT (STRAINAUSTRALIA- VICTORIA/32) PRRPP_NDVB RNA POLYMERASE ALPHA NEWCASTLEDISEASE VIRUS 256-276 SUBUNIT (STRAIN BEAUDETTE C/45) PRRPP_PI2H RNAPOLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216-243 SUBUNIT PRRPP_PI2HTRNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 2 VIRUS 216-243 SUBUNIT (STRAINTOSHIBA) PRRPP_PI4HA RNA POLYMERASE ALPHA HUMAN PARAINFLUENZA 4A 220-247SUBUNIT VIRUS (STRAIN TOSHIBA) PRRPP_PI4HB RNA POLYMERASE ALPHA HUMANPARAINFLUENZA 4B 220-247 SUBUNIT VIRUS (STRAIN 68-333) PRRPP_PIRYV RNAPOLYMERASE ALPHA PIRY VIRUS 134-161 SUBUNIT PRRPP_RABVA RNA POLYMERASEALPHA RABIES VIRUS (STRAIN AVO1) 8-32 SUBUNIT PRRPP_RABVC RNA POLYMERASEALPHA RABIES VIRUS (STRAIN CVS-11) 8-32 SUBUNIT PRRPP_RABVE RNAPOLYMERASE ALPHA RABIES VIRUS (STRAIN ERA), 8-32 216-237 SUBUNIT AND(STRAIN PM) PRRPP_RABVP RNA POLYMERASE ALPHA RABIES VIRUS (STRAIN PV)8-32 216-237 SUBUNIT PRRPP_RABV5 RNA POLYMERASE ALPHA RABIES VIRUS(STRAIN SAD B19) 8-32 216-237 SUBUNIT PRRPP_SV5 RNA POLYMERASE ALPHASIMINA VIRUS 5 (STRAIN W3) 199-226 282-301 SUBUNIT PRRPP_VSVJO RNAPOLYMERASE ALPHA VESICULAR STOMATITIS VIRUS 197-223 SUBUNIT (SEROTYPENEW JERSEY/ STRAIN OG) PS27R_ASFB7 S273R PROTEIN AFRICAN SWINE FEVERVIRUS 196-218 (STRAIN BA71V) PSODC_VACCC SUPEROXIDE DISMUTASE VACCINIAVIRUS (STRAIN 19-40 LIKE PROTEIN COPENHAGEN) PSODC_VACCV SUPEROXIDEDISMUTASE VACCINIA VIRUS (STRAIN WR) 19-40 LIKE PROTEIN PSODC_VARVSUPEROXIDE DISMUTASE VARIOLA VIRUS 19-40 LIKE PROTEIN PSPHR_AMEPVSHEROIDIN AMSACTA MOOREI 58-79 627-646 ENTOMOMPOXVIRUS PSPHR_CBEPVSHEROIDIN PRECURSOR CHORISTONEURA BIENNIS 177-201 ENTOMOPOXVIRUSPSPI1_MYXVL SERPIN 1 MYXOMA VIRUS (STRAIN 62-80 217-243 LAUSANNE)PSWFA_SPVKA SWF8A PROTEIN SWINEPOX VIRUS (STRAIN 61-83 KASZA) PTALA_BFDVLARGE T ANTIGEN BUDGERIGAR FLEDGLING 354-369 DISEASE VIRUS PTALA_POVBALARGE T ANTIGEN POLYOMAVIRUS BK (STRAIN AS) 202-224 429-444 PTALA_POVBKLARGE T ANTIGEN POLYOMAVIRUS BK 202-224 429-444 PTALA_POVBO LARGE TANTIGEN BOVINE POLYOMAVIRUS 385-400 PTALA_POVHA LARGE T ANTIGEN HAMSTERPOLYOMAVIRUS 43-69 549-564 PTALA_POVJC LARGE T ANTIGEN POLYOMAVIRUSVIRUS JC 201-223 428-443 PTATAL_POVLY LARGE T ANTIGEN LYMPHOTROPICPOLYOMAVIRUS 43-69 516-542 PTALA_POVM3 LARGE T ANTIGEN MOUSEPOLYOMAVIRUS 576-591 (STRAIN 3) PTALA_POVMA LARGE T ANTIGEN MOUSEPOLYOMAVIRUS 574-589 (STRAIN A2) PTALA_POVMC LARGE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 571-586 CRAWFORD SMALL-PLAQUE) PTALA_POVMK LARGE TANTIGEN MOUSE POLYOMAVIRUS 173-191 278-304 446-472 (STRAIN KILHAM)PTALA_SV40 LARGE T ANTIGEN SIMIAN VIRUS 40 (SV40) 200-222 427-442PTAMI_POVHA MIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 43-69 PTASM_POVHASMALL T ANTIGEN HAMSTER POLYOMAVIRUS 43-69 PTASM_POVLY SMALL T ANTIGENLYMPHOTROPIC POLOMAVIRUS 43-69 PTASM_POVMK SMALL T ANTIGEN MOUSEPOLYOMAVIRUS 43-69 67-89 (STRAIN KILHAM) PTATR_NPVAC TRANS-ACTIVATINGTRANS AUTOGRAPHA CALIFORNICA 406-431 REG PROTEIN NUCLEAR POLYHEDROSISVIRUS PTATR_NPVBM TRANS-ACTIVATING TRANS BOMBYX MORI NUCLEAR 411-436 REGPROTEIN POLYHEDROSIS VIRUS PTATR_NPVOP TRANS-ACTIVATING TRANS ORGYIAPSEUDOTSUGATA 389-414 REG PROTEIN MULTICAPSID POLYHEDROSIS VIRUSPTAT_BIV06 TRANS-ACTIVATING TRANS BOVINE IMMUNODEFICIENCY 44-59 REGPROTEIN VIRUS (ISOLATE 106) PTAT_BIV27 TRANS-ACTIVATING TRANS BOVINEIMMUNODEFICIENCY 44-59 REG PROTEIN VIRUS (ISOLATE 127) PTAT_HTL1ATRANS-ACTIVATING TRANS HUMAN T-CELL LEUKEMIA VIRUS 192-210 REG PROTEINTYPE 1 (STRAIN ATK) PTAT_HTL1C TRANS-ACTIVATING TRANS HUMAN T-CELLLEUKEMIA VIRUS 192-210 REG PROTEIN TYPE 1 (CARIBBEAN ISOLATE) PTAT_HV1U4TAT PROTEIN HUMAN IMMUNODEFICIENCY 18-43 VIRUS TYPE 1 (STRAINUNANDAN/ISO PTCB_FLV T-CELL RECEPTOR BETA FELINE LEUKEMIA VIRUS 6-2298-118 CHAIN PRECURSOR PTEGP_HSVEB PROBABLE TEGUMENT EQUINE HERPESVIRUSTYPE 1 101-118 PHOSPHOPROTEIN (STRAIN AB4P) PTEGP_HSVEK TEGUMENT PROTEINEQUINE HERPESVIRUS TYPE 1 101-118 (STRAIN KENTUCKY A) PTEGU_EBV LARGETEGUMENT PROTEIN EPSTEIN-BARR VIRUS 143-166 767-789 814-835 1052-10751194-1220 1469-1496 1869-1893 3061-3077 3102-3126 (STRAIN B95-8)PTEGU_HCMVA PROBABLE LARGE HUMAN CYTOMEGALOVIRUS 342-358 644-6681061-1077 1307-1322 1323-1345 1419-1446 1509-1536 1957-1974 2199-2221TEGUMENT PROTEIN (STRAIN AD169) PTEGU_HSV11 LARGE TEGUMENT PROTEINHERPES SIMPLEX VIRUS 12-27 623-646 1732-1759 (TYPE 1/STRAIN 17)PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPES SIMPLEX VIRUS 131-152 345-365615-636 1027-1043 1308-1328 1562-1579 (TYPE 6/STRAIN GS) PTEGU_HSVEBLARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1 432-456 559-5821072-1099 1107-1132 1618-1640 1764-1791 2263-2285 (STRAIN AB4P)PTEGU_HSVSA PROBABLE LARGE HERPESVIRUS SAIMIRI 467-491 714-737 989-10081121-1137 1155-1174 1177-1193 1503-1525 1607-1622 1898-1915 TEGUMENTPROTEIN (STRAIN 11) 2421-2349 PTEGU_VZVD LARGE TEGUMENT PROTEINVARICELLA-ZOSTER VIRUS 433-456 494-511 711-728 801-823 895-920 1013-10341360-1376 1632-1657 1780-1807 (STRAIN DUMAS) 2008-2029 2270-22872694-2711 PTERM_ADE02 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 2 63-80593-616 PTERM_ADE05 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 5 63-80593-616 PTERM_ADE07 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 7 63-80580-603 PTERM_ADE12 DNA TERMINAL PROTEIN HUMAN ADENOVIRUS TYPE 12 46-63334-350 546-569 PTOP2_ASFB7 DNA TOPOISOMERASE II AFRICAN SWINE FEVERVIRUS 119-146 686-707 (STRAIN BA71V) PTOP2_ASFM2 DNA TOPOISOMERASE IIAFRICAN SWINE FEVER VIRUS 119-146 685-706 (ISOLATE MALAWI LIL 20/1)PTR14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 139-165 TRL14(STRAIN AD169) PTREL_AVIRE REL TRANSFORMING AVIAN RETICULOENDOTHELIOSIS56-74 PROTEIN VIRUS PTYSY_VZVD THYMIDYLATE SYNTHASE VARICELLA-ZOSTERVIRUS 11-29 (STRAIN DUMAS) PU15R_HSV6U POSSIBLE GANCICLOVIR HERPESSIMPLEX VIRUS 400-415 KINASE (TYPE 6/STRAIN UGANDA-1102) PU2L_HSV6UPROTEIN 2L HERPES SIMPLEX VIRUS 4-27 (TYPE 6/STRAIN UGANDA-1102)PUDPE_NPVAC UDP-GLUCOSYLTRANSFER- AUTOGRAPHA CALIFORNICA 452-477 ABLEPRECURSOR NUCLEAR POLYHEDROSIS VIRUS PUL02_HCMVA HYPOTHETICAL PROTEINUL2 HUMAN CYTOMEGALOVIRUS 25-49 (STRAIN AD169) PUL05_HCMVA HYPOTHETICALPROTEIN UL2 HUMAN CYTOMEGALOVIRUS 11-37 (STRAIN AD169) PUL06_EBV VIRIONPROTEIN BBRF1 EPSTEIN-BARR VIRUS 253-268 (STRAIN B95-8) PUL06_HCMVAHYPOTHETICAL PROTEIN UL6 HUMAN CYTOMEGALOVIRUS 191-208 (STRAIN AD169)PUL06_HSV11 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS 404-429 (TYPE1/STRAIN 17) PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE1 437-461 (STRAIN AB4P) PUL06_HSVSA VIRIION GENE 43 PROTEIN HERPES VIRUSSAIMIRI 44-60 (STRAIN 11) PUL07_EBV BBRF2 PROTEIN EPSTEIN-BARR VIRUS127-149 (STRAIN B95-8) PUL07_HCMVA HYPOTHETICAL PROTEIN UL7 HUMANCYTOMEGALOVIRUS 88-108 186-209 (STRAIN AD169) PUL07_HSV11 PROTEIN UL7HERPES SIMPLEX VIRUS 177-200 (TYPE 1/STRAIN 17) PUL07_HSVEB GENE 55PROTEIN EQUINE HERPES VIRUS TYPE 1 11-32 (STRAIN AB4P) PUL07_HSVSA GENE42 PROTEIN HERPESVIRUS SAIMIRI 44-61 (STRAIN 11) PUL07_VZVD GENE 53PROTEIN VARICELLA-ZOSTER VIRUS 158-176 202-224 (STRAIN DUMAS)PUL08_HSV11 PROTEIN UL8 HERPES SIMPLEX VIRUS 514-538 705-726 (TYPE1/STRAIN 17) PUL08_VZVD GENE 52 PROTEIN VARICELLA-ZOSTER VIRUS 228-255593-616 (STRAIN DUMAS) PUL09_HSV11 ORIGIN OF REPLICATION HERPES SIMPLEXVIRUS 564-584 BINDING PROTEIN (TYPE 1/STRAIN 17) PUL09_HSVEB ORIGIN OFREPLICATION EQUINE HERPESVIRUS TYPE 1 171-196 612-628 BINDING PROTEIN(STRAIN AB4P) PUL09_VZVD ORIGIN OF REPICATION VARICELLA-ZOSTER VIRUS68-92 168-190 484-508 BINDING PROTEIN (STRAIN DUMAS) PUL11_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 223-247 UL11 (STRAIN AD169)PUL13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 449-467 UL13(STRAIN AD169) PUL14_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS280-299 UL14 (STRAIN AD169) PUL14_HSV11 HYPOTHETICAL UL14 HERPES SIMPLEXVIRUS 96-116 PROTEIN (TYPE 1/STRAIN 17) PUL14_HSVEB HYPOTHETICAL GENE 48EQUINE HERPESVIRUS TYPE 1 100-127 PROTEIN (STRAIN AB4P) PUL16_HSV11PROTEIN UL16 HERPES SIMPLEX VIRUS 22-49 (TYPE 1/STRAIN 17) PUL16_HSVEBGENE 46 PROTEIN EQUINE HERPESVIRUS TYPE 1 26-43 98-119 324-339 (STRAINAB4P) PUL16_HSVSA GENE 33 PROTEIN HERPESVIRUS SAIMIRI 69-87 278-295(STRAIN 11) PUL16_VZVD GENE 44 PROTEIN VARICELLA-ZOSTER VIRUS 65-80317-332 (STRAIN DUMAS) PUL17_EBV PROTEIN BGLF1 EPSTEIN-BARR VIRUS373-393 (STRAIN B95-8) PUL17_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 60-82 UL17 (STRAIN AD169) PUL17_HSV11 PROTEIN UL17HERPES SIMPLEX VIRUS 156-181 (TYPE 1/STRAIN 17) PUL17_HSVSA GENE 32PROTEIN HERPESVIRUS SAIMIRI 94-118 348-370 (STRAIN 11) PUL19_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEAGLOVIRUS 61-85 UL19 (STRAIN AD169)PUL20_PRVN3 UL20 MEMBRANE PROTEIN PSEUDORABIES VIRUS 54-76 HOMOLOG(STRAIN NIA-3) PUL20_VZVD GENE 39 MEMBRANE VARICELLA-ZOSTER VIRUS201-224 PROTEIN (STRAIN DUMAS) PUL21_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 91-110 UL21 (STRAIN AD169) PUL21_HSV11 PROTEIN UL21HERPES SIMPLEX VIRUS 98-114 130-146 (TYPE 1/STRAIN 17) PUL21_USV1EPROTEIN UL21 HERPES SIMPLEX VIRUS 98-114 130-146 (TYPE 1/STRAIN HFEM)PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1 119-142 294-321379-403 412-427 (STRAIN AB4P) PUL21_VZVD GENE 38 PROTEINVARICELLA-ZOSTER VIRUS 270-293 300-327 (STRAIN DUMAS) PUL22_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 44-67 UL22 (STRAIN AD169)PUL24_EBV PROTEIN BXRF1 EPSTEIN-BARR VIRUS 134-155 (STRAIN B95-8)PUL24_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 206-222 UL24(STRAIN AD169) PUL24_HSV11 PROTEIN UL24 HERPES SIMPLEX VIRUS 147-166(TYPE 1/STRAIN 17) PUL24_ILTVT PROTEIN UL24 INFECTIOUS LARYNGOTRACHEI-158-179 HOMOLOG TIS VIRUS (STRAIN THORNE V882) PUL25_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 484-500 UL25 (STRAIN AD169) PUL25_HSV11VIRION PROTEIN UL25 HERPES SIMPLEX VIRUS 86-101 (TYPE 1/STRAIN 17)PUL25_HSVEB VIRION PROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 89-104 130-147(STRAIN AB4P) PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI244-265 344-368 (STRAIN 11) PUL25_ILTVT 64 1 KD VIRION PROTEININFECTIOUS LARYNGOTRACHEI- 270-287 316-336 TIS VIRUS (STRAIN THRONEV882) PUL27_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 307-324486-507 UL27 (STRAIN AD169) PUL29_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 239-266 UL29 (STRAIN AD169) PUL30_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 9-32 UL30 (STRAIN AD169) PUL31_EBV PROTEINBFLF2 EPSTEIN-BARR VIRUS 273-296 (STRAIN B95-8) PUL31_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 410-437 582-602 UL31 (STRAIN AD169)PUL31_HSV11 PROTEIN UL31 HERPES SIMPLEX VIRUS 95-116 (TYPE 1/STRAIN 17)PUL31_HSVEB GENE 29 PROTEIN EQUINE HERPESVIRUS TYPE 1 104-125 288-309(STRAIN AB4P) PUL31_HSVSA GENE 69 PROTEIN HERPESVIRUS SAIMIRI 145-161163-190 (STRAIN 11) PUL31_VZVD GENE 27 PROTEIN VARICELLA-ZOSTER VIRUS117-138 295-316 (STRAIN DUMAS) PUL32_HSV11 PROBABLE MAJOR ENV HERPESSIMPLEX VIRUS 127-143 564-585 GLYCOPROTEIN UL32 (TYPE 1/STRAIN 17)PUL32_HSVEB MAJOR ENVELOPE EQUINE HERPESVIRUS TYPE 1 81-108 GLYCOPROTEIN300 (STRAIN AB4P) PUL32_VZVD PROBABLE MAJOR ENV VARICELLA-ZOSTER VIRUS553-574 GLYCOPROTEIN 26 (STRAIN DUMAS) PUL33_HCMVA G-PROTEIN COUPLED RECHUMAN CYTOMEGALOVIRUS 76-102 HOMOLOG UL33 (STRAIN AD169) PUL34_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 214-232 297-321 UL34 (STRAINAD169) PUL34_HSV11 VIRION PROTEIN UL34 HERPES SIMPLEX VIRUS 251-275(TYPE 1/STRAIN 17) PUL34_HSVEB VIRION GENE 26 PROTEIN EQUINE HERPESVIRUSTYPE 1 249-264 (STRAIN AB4P) PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUSSAIMIRI 207-229 (STRAIN 11) PUL34_VZVD VIRION GENE 24 PROTEINVARICELLA-ZOSTER VIRUS 244-266 (STRAIN DUMAS) PUL35_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 229-252 310-329 331-348 UL35 (STRAINAD169) PUL36_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 143-168387-410 UL36 (STRAIN AD169) PUL37_EBV PROTEIN BOLF1 EPSTEIN-BARR VIRUS21-36 135-155 707-730 984-1004 (STRAIN B95-8) PUL37_HSV11 PROTEIN UL37HERPES SIMPLEX VIRUS 229-252 262-277 445-467 665-681 758-777 925-9471009-1028 (TYPE 1/STRAIN 17) PUL37_HSVEB GENE 23 PROTEIN EQUINEHERPESVIRUS TYPE 1 414-440 491-510 664-690 778-805 901-919 (STRAIN AB4P)PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SIAMIRI 5-20 (STRAIN 11)PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS 4-19 104-124 140-165168-191 196-212 229-244 248-269 670-694 776-803 (STRAIN DUMAS) 904-923PUL38_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 199-220 UL38(STRAIN AD169) PUL40_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS18-35 UL40 (STRAIN AD169) PUL41_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 15-31 116-134 UL41 (STRAIN AD169) PUL43_HSV11 MEMBRANEPROTEIN UL43 HERPES SIMPLEX VIRUS 41-63 139-160 343-365 394-421 (TYPE1/STRAIN 17) PUL43_HSVEB GENE 17 MEMBRANE EQUINE HERPESVIRUS TYPE 134-60 86-107 PROTEIN (STRAIN AB4P) PUL43_VZVD GENE 17 MEMBRANEVARICELLA-ZOSTER VIRUS 88-114 127-146 160-180 277-299 374-400 PROTEIN(STRAIN DUMAS) PUL45_HSV11 PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE1/STRAIN 17) PUL45_HSV1K PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE1/STRAIN KOS) PUL45_HSV1M PROTEIN UL45 HERPES SIMPLEX VIRUS 25-46 (TYPE1/STRAIN MP) PUL47_HCMVA PROTEIN UL47 HUMAN CYTOMEGALOVIRUS 193-218438-464 533-556 614-640 741-766 (STRAIN AD169) PUL47_HSV11 VIRIONPROTEIN UL47 HERPES SIMPLEX VIRUS 404-425 (TYPE 1/STRAIN 17) PUL47_HSV1FVIRION PROTEIN UL47 HERPES SIMPLEX VIRUS 404-425 (TYPE 1/STRAIN 17)PUL47_HSVBP 80 7 KD ALPHA BOVINE HERPESVIRUS TYPE 1 681-702TRANS-INDUCING PROTEIN PUL47_HSVE4 97 KD ALPHA EQUINE HERPESVIRUS TYPE 4580-601 TRANS-INDUCING PROTEIN PUL47_HSVEB 97 KD ALPHA EQUINEHERPESVIRUS TYPE 1 587-608 TRANS-INDUCING PROTEIN (STRAIN AB4P)PUL47_VZVD ALPHA TRANS-INDUCING VARICELLA-ZOSTER VIRUS 42-58 608-627FACTOR 91 8 KD PROTEIN (STRAIN DUMAS) PUL49_EBV HYPOTHETICAL BFRF2EPSTEIN-BARR VIRUS 336-358 PROTEIN (STRAIN B95-8) PUL49_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 248-264 528-543 UL49 (STRAINAD169) PUL49_HSV11 TEGUMENT PROTEIN UL49 HERPES SIMPLEX VIRUS 226-252(TYPE 1/STRAIN 17) PUL49_HSVSA HYPOTHETICAL GENE 66 HERPESVIRUS SAIMIRI232-253 PROTEIN (STRAIN 11) PUL50_HCMVA PROTEIN UL50 HUMANCYTOMEGALOVIRUS 96-119 (STRAIN AD169) PUL51_HSV11 PROTEIN UL51 HERPESSIMPLEX VIRUS 49-66 (TYPE 1/STRAIN 17) PUL51_HSVE4 GENE 8 PROTEIN EQUINEHERPESVIRUS TYPE 4 169-190 (STRAIN 1942) PUL51_HSVEB GENE 8 PROTEINEQUINE HERPESVIRUS TYPE 1 166-189 (STRAIN AB4P) PUL51_VZVD GENE 7PROTEIN VARICELLA-ZOSTER VIRUS 30-49 (STRAIN DUMAS) PUL52_EBV PROBABLEDNA EPSTEIN-BARR VIRUS 44-59 REPLICATION PROTEIN BSLF1 (STRAIN B95-8)PUL52_HSV11 DNA REPLICATION HERPES SIMPLEX VIRUS 17-37 65-91 PROTEINUL52 (TYPE 1/STRAIN 17) PUL52_HSVE4 DNA REPLICATION EQUINE HERPESVIRUSTYPE 4 8-27 PROTEIN UL52 (STRAIN 1942) PUL52_HSVEB DNA REPLICATIONEQUINE HERPESVIRUS TYPE 1 8-27 135-159 316-337 PROTEIN UL52 (STRAINAD4P) PUL52_HSVSA PROBABLE DNA HERPESVIRUS SAIMIRI 489-508 586-605REPLICATION GENE 56 (STRAIN 11) PROTEIN PUL52_VZVD PROBABLE DNAVARICELLA-ZOSTER VIRUS 446-466 645-670 REPLICATION GENE 6 (STRAIN DUMAS)PROTEIN PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS 173-188 (STRAINAD169) PUL53_HSV6U UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS 64-80 (TYPE6/STRAIN UGANDA-1102) PUL60_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 120-141 UL60 (STRAIN AD169) PUL62_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 62-84 178-205 UL62 (STRAIN AD169)PUL68_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 87-107 UL68(STRAIN AD169) PUL70_HCMVA PROBABLE DNA HUMAN CYTOMEGALOVIRUS 225-252409-430 499-514 626-645 770-793 REPLICATION PROTEIN UL70 (STRAIN AD169)PUL71_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 234-250 UL71(STRAIN AD169) PUL73_EBV HYPOTHETICAL BLRF1 EPSTEIN-BARR VIRUS 62-87PROTEIN (STRAIN B95-8) PUL73_HSVSA HYPOTHETICAL GENE 53 HERPESVIRUSSAIMIRI 51-73 PROTEIN (STRAIN 11) PUL74_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 12-32 UL74 (STRAIN AD169) PUL77_HCMVA VIRION PROTEINUL77 HUMAN CYTOMEGALOVIRUS 268-291 607-628 (STRAIN AD169) PUL78_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 71-90 190-205 UL78 (STRAINAD169) PUL79_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 40-58 UL79(STRAIN AD169) PUL84_HCMVA 65 KD EARLY HUMAN CYTOMEGALOVIRUS 100-116NONSTRUCTURAL PROTEIN (STRAIN AD169) PUL84_HCMVT 65 KD EARLY HUMANCYTOMEGALOVIRUS 100-116 NONSTRUCTURAL PROTEIN (STRAIN TOWNE) PUL87_EBVHYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS 406-422 530-557 B(C)RF1 (STRAINB95-8) PUL87_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 205-231309-335 606-628 633-653 757-781 UL87 (STRAIN AD169) PUL87_HSV6UHYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS 301-322 507-529 (TYPE6/STRAIN UGANDA-1102) PUL87_HSVSA HYPOTHETICAL GENE 24 HERPESVIRUSSAIMIRI 365-387 402-422 579-595 PROTEIN (STRAIN 11) PUL88_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 173-191 252-279 UL88 (STRAINAD169) PUL88_HSV6U HYPOTHETICAL PROTEIN 6R HERPES SIMPLEX VIRUS 150-173(TYPE 6/STRAIN UGANDA-1102) PUL90_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 35-50 UL90 (STRAIN AD169) PUL91_HSV6U HYPOTHETICALPROTEIN 8R HERPES SIMPLEX VIRUS 43-65 (TYPE 6/STRAIN UGANDA-1102)PUL92_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 76-99 UL92(STRAIN AD169) PUL92_HSV6U HYPOTHETICAL PROTEIN 9R HERPES SIMPLEX VIRUS36-55 100-119 (TYPE 6/STRAIN UGANDA-1102) PUL94_HCMVA PROTEIN UL94 HUMANCYTOMEGALOVIRUS 49-70 PUL95_EBV HYPOTHETICAL PROTEIN EPSTEIN-BARR VIRUS201-223 BGLF3 (STRAIN B95-8) PUL95_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 508-526 UL95 (STRAIN AD169) PUL95_HSV6U HYPOTHETICALPROTEIN 13R HERPES SIMPLEX VIRUS 9-30 328-346 (TYPE 6/STRAINUGANDA-1102) PUL95_HSVSA HYPOTHETICAL GENE 34 HERPESVIRUS SAIMIRI187-209 PROTEIN (STRAIN 11) PUL97_HCMVA GANCICLOVIR KINASE HUMANCYTOMEGALOVIRUS 208-228 541-567 (STRAIN AD169) PULA2_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 168-185 UL102 (STRAIN AD169) PULA3_HCMVAPROTEIN UL103 HUMAN CYTOMEGALOVIRUS 26-47 (STRAIN AD169) PULA4_HCMVAVIRION PROTEIN UL104 HUMAN CYTOMEGALOVIRUS 215-235 423-450 (STRAINAD169) PULA8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 93-118UL108 (STRAIN AD169) PULB1_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 60-81 UL111 (STRAIN AD169) PULB3_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 298-319 UL113 (STRAIN AD169) PULB7_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 178-195 UL117 (STRAIN AD169)PULB8_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 103-130 UL118(STRAIN AD169) PULC1_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS129-153 UL121 (STRAIN AD169) PULD2_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 4-22 UL132 (STRAIN AD169) PUNG_FOWP1 URACIL-DNAGLUCOSYLASE FOWLPOX VIRUS (STRAIN FP-1) 12-37 PUNG_HSVEB URACIL-DNAGLUCOSYLASE EQUINE HERPESVIRUS TYPE 1 224-250 (STRAIN AB4P) PUNG_VACCCURACIL-DNA GLUCOSYLASE VACCINIA VIRUS (STRAIN 82-103 COPENHAGEN)PUNG_VACCV URACIL-DNA GLUCOSYLASE VACCINIA VIRUS (STRAIN WR) 82-103PUNG_VARV URACIL-DNA GLUCOSYLASE VARIOLA VIRUS 82-103 PUNG_VZVDURACIL-DNA GLUCOSYLASE VARICELLA-ZOSTER VIRUS 217-243 (STRAIN DUMAS)PUS02_HSVEB GENE 68 PROTEIN EQUINE HERPESVIRUS TYPE 1 48-63 (STRAINAB4P) PUS02_HSVEK US1 PROTEIN EQUINE HERPESVIRUS TYPE 1 48-63 (STRAINKENTUCKY A) PUS02_PRVN3 PROTEIN US2 HOMOLOG PSEUDORABIES VIRUS 120-136(STRAIN NIA-3) PUS03_HCMVA HQLF1 PROTEIN HUMAN CYTOMEGALOVIRUS 24-39(STRAIN AD169) PUS05_HSV11 PUTATIVE GLYCOPROTEIN HERPES SIMPLEX VIRUS53-70 US5 (TYPE 1/STRAIN 17) PUS05_HSV2 PUTATIVE GLYCOPROTEIN HERPESSIMPLEX VIRUS 53-70 US5 (TYPE 2) PUS09_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 179-206 HXLF3 (STRAIN AD169) PUS11_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 98-113 HXLF1 (STRAIN AD169) PUS12_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 29-50 113-135 195-222 HVLF6(STRAIN AD169) PUS13_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS11-33 208-231 HVLF5 (STRAIN AD169) PUS14_HCMVA HYPOTHETICAL PROTEINHUMAN CYTOMEGALOVIRUS 236-260 HVLF4 (STRAIN AD169) PUS15_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 378-402 443-466 HVLF3 (STRAINAD169) PUS16_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 151-174243-267 HVLF2 (STRAIN AD169) PUS17_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 110-126 HVLF1 (STRAIN AD169) PUS19_HCMVA MEMBRANEPROTEIN HUMAN CYTOMEGALOVIRUS 120-142 178-202 214-232 HWLF4 (STRAINAD169) PUS21_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 41-67155-182 HWLF2 (STRAIN AD169) PUS22_HCMVA EARLY NUCLEAR PROTEIN HUMANCYTOMEGALOVIRUS 270-292 HWLF1 (STRAIN AD169) PUS23_HCMVA HYPOTHETICALPROTEIN HUMAN CYTOMEGALOVIRUS 292-310 HHLF7 (STRAIN AD169) PUS24_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 352-373 HHLF6 (STRAIN AD169)PUS28_HCMVA G-PROTEIN COUPLED REC HUMAN CYTOMEGALOVIRUS 34-49 140-160HOMOLOG US28 (STRAIN AD169) PUS28_HCMVT G-PROTEIN COUPLED REC HUMANCYTOMEGALOVIRUS 34-49 140-160 HOMOLOG US28 (STRAIN TOWNE) PUS29_HCMVAHYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 246-269 HHRF4 (STRAIN AD169)PUS30_HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 102-128 208-233HHRF5 (STRAIN AD169) PUS33_HCMVA HYPOTHETICAL PROTEIN HUMANCYTOMEGALOVIRUS 41-59 HHLF3 (STRAIN AD169) PV07K_LSV 7 KD PROTEIN LILYSYMPTOMLESS VIRUS 27-46 PV07K_NMV 7 KD PROTEIN POTATO VIRUS S (STRAIN28-49 PERUVIAN) PV07K_PVSP 7 KD PROTEIN POTATO VIRUS X (PVX) 31-48PV07K_PVX 7 KD PROTEIN POTATO VIRUS X (STRAIN X3) 31-48 PV07K_PVXX3 7 KDPROTEIN POTATO VIRUS X (STRAIN XC) 31-48 (STRAIN CP) PV117_ASFL5 LIS121-1 PROTEIN AFRICAN SWINE FEVER VIRUS 73-94 (STRAIN LIS57) PV121_ASFL5125 KD PROTEIN ALFALFA MOSAIC VIRUS 59-79 (STRAIN 425/ISOLATE LEIDEN)PV12K_PVMR 12 KD PROTEIN POTATO VIRUS M (STRAIN 79-96 RUSSIAN)PV13K_TRVPL 16 KD PROTEIN TOBACCO RATTLE VIRUS 24-51 (STRAIN PLB)PV143_NPVAC HELICASE AUTOGRAPHA CALIFORNICA 79-102 846-863 1013-1037NUCLEAR POLYHEDROSIS VIRUS PV14K_BSVM 14 KD PROTEIN BARLEY STRIPE MOSAICVIRUS 14-29 80-99 (BSMV) PV18K_MLVAB 18 KD PROTEIN ABELSON MURINELEUKEMIA 29-44 128-154 VIRUS PV19R_VACCV PROTEIN B19 VACCINIA VIRUS(STRAIN WR) 114-132 152-172 PV1A_BBMV 1A PROTEIN BROAD BEAN MOTTLE VIRUS196-220 752-771 PV1A_BMV 1A PROTEIN BROME MOSAIC VIRUS 747-767 PV1A_CCMV1A PROTEIN COWPEA CHLOROTIC MOTTLE 744-763 VIRUS PV1A_CMVFN 1A PROTEINCUCUMBER MOSAIC VIRUS 775-800 (STRAIN FNY) PV1A_CMVO 1A PROTEIN CUCUMBERMOSAIC VIRUS 775-800 (STRAIN O) PV1A_CMVQ 1A PROTEIN CUCUMBER MOSAICVIRUS 774-799 (STRAIN Q) PV1A_PSVJ 1A PROTEIN PEANUT STUNT VIRUS (STRAINJ) 472-493 783-808 PV23K_HSVTH 23 5 KD PROTEIN TURKEY HERPESVIRUS176-191 (STRAIN H2) PV28K_PLRV1 28 KD PROTEIN POTATO LEAFROLL VIRUS60-76 192-207 (STRAIN 1) ( PV28K_PLRVW 28 KD PROTEIN POTATO LEAFROLLVIRUS 60-76 192-207 (STRAIN WAGENINGEN) PV29K_BWYVF 29 KD PROTEIN BEETWESTERN YELLOWS VIRUS 22-43 136-157 (ISOLATE FL-1) PV29K_PEBV 29 6 KDPROTEIN PEA EARLY BROWNING VIRUS 114-132 PV2A_BMV 2A PROTEIN BROMEMOSAIC VIRUS 285-303 759-777 PV2A_CCMV 2A PROTEIN COWPEA CHLOROTICMOTTLE 296-314 VIRUS PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS 234-255PV30K_TRVTC 29 1 KD PROTEIN TOBACCO RATTLE VIRUS 62-82 (STRAIN TCM)PV31K_TOBSV 31 7 KD PROTEIN TOBACCO STREAK VIRUS 226-250 (STRAIN WC)PV362_ASFB7 K 362 PROTEIN AFRICAN SWINE FEVER VIRUS 145-164 (STRAINBA71V) PV375_ASFL5 LIS 375 PROTEIN AFRICAN SWINE FEVER VIRUS 114-135(STRAIN LIS57) PV382_ASFL5 LIS 382 PROTEIN AFRICAN SWINE FEVER VIRUS114-135 (STRAIN LIS57) PV3A_CCMV COWPEA CHLOROTIC 160-187 MOTTLE VIRUSPV3A_CMVFN 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN FNY)PV3A_CMVM 3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN M) PV3A_CMVO3A PROTEIN CUCUMBER MOSAIC VIRUS 214-235 (STRAIN O) PV3A_CMVQ 3A PROTEINCUCUMBER MOSAIC VIRUS 214-235 (STRAIN Q) PV3A_CMVY CUCUMBER MOSAIC VIRUS214-235 (STRAIN Y) PV3A_IBVB 3A PROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28VIRUS (STRAIN BEAUDETTE) PV3A_IBVM 3A PROTEIN AVAIN INFECTIOUSBRONCHITIS 5-28 VIRUS (STRAIN M41) PV3A_IBVP3 3A PROTEIN AVAININFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN PORTUGAL/322/82) PV3A_IBVU5 3APROTEIN AVAIN INFECTIOUS BRONCHITIS 5-28 VIRUS (STRAIN UK/183/66)PV3A_TAV 3A PROTEIN TOMATO ASPERMY VIRUS 147-168 PV58K_BSMV 58 KDPROTEIN BARLEY STRIPE MOSAIC VIRUS 320-340 PV66K_BWYVF PROTEIN 6B CANINEENTERIC CORONA VIRUS 97-116 (STRAIN K378) PV70K_TYMVA 69 KD PROTEINTURNIP YELLOW MOSAIC VIRUS 12-35 (AUSTRALIAN ISOLATE) PV90K_AMVLE 90 KDPROTEIN ALFALFA MOSAIC VIRUS (STRAIN 44-59 425/ISOLATE LEIDEN)PVA04_VACCC PROTEIN A4 VACCINIA VIRUS (STRAIN 217-244 COPENHAGEN)PVA04_VACCV PROTEIN A4 VACCINIA VIRUS (STRAIN WR) 217-244 PVA04_VARVPROTEIN A4 VARIOLA VIRUS 207-234 PVA09_VACCC PROTEIN A9 VACCINIA VIRUS(STRAIN 41-66 COPENHAGEN) PVA09_VARV PROTEIN A9 VARIOLA VIRUS 41-66PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAIN 23-44 140-159 299-317COPENHAGEN) PVA11_VARV PROTEIN A11 VARIOLA VIRUS 23-44 141-160 300-318PVA14_VACCC PROTEIN A14 VACCINIA VIRUS (STRAIN 39-62 COPENHAGEN)PVA14_VARV PROTEIN A14 VARIOLA VIRUS 39-62 PVA16_VACCC PROTEIN A16VACCINIA VIRUS (STRAIN 341-362 COPENHAGEN) PVA16_VARV PROTEIN A16VARIOLA VIRUS 340-361 PVA18_VACCC 56 KD ABORTIVE LATE VACCINIA VIRUS(STRAIN 429-447 PROTEIN COPENHAGEN) PVA18_VACCV 56 KD ABORTIVE LATEVACCINIA VIRUS (STRAIN WR) 429-447 PROTEIN PVA18_VARV 56 KD ABORTIVELATE VARIOLA VIRUS 429-447 PROTEIN PVA20_VACCC PROTEIN A20 VACCINIAVIRUS (STRAIN 107-131 193-209 COPENHAGEN) PVA20_VARV PROTEIN A20 VARIOLAVIRUS 107-131 193-209 PVA23_VARV PROTEIN A23 VARIOLA VIRUS 58-82PVA28_VACCV PROTEIN A28 VACCINIA VIRUS (STRAIN WR), 53-76 AND (STRAINCOPENHAGEN) PVA28_VARV PROTEIN A28 VARIOLA VIRUS 53-76 PVA32_VACCVPROTEIN A32 VACCINIA VIRUS (STRAIN WR), 205-220 AND (STRAIN COPENHAGEN)PVA32_VARV PROTEIN A32 VARIOLA VIRUS 175-190 PVA35_VACCC PROTEIN A35PRECURSOR VACCINIA VIRUS (STRAIN 33-49 COPENHAGEN) PVA35_VACCV PROTEINA35 PRECURSOR VACCINIA VIRUS (STRAIN WR) 33-49 141-164 PVA37_VACCCPROTEIN A37 VACCINIA VIRUS (STRAIN 66-90 COPENHAGEN) PVA37_VACCV PROTEINA37 VACCINIA VIRUS (STRAIN WR) 66-90 PVA40_VACCC PROTEIN A40 VACCINIAVIRUS (STRAIN 4-30 COPENHAGEN) PVA41_VACCC PROTEIN A41 PRECURSORVACCINIA VIRUS (STRAIN 47-71 COPENHAGEN) PVA41_VACCV PROTEIN A41PRECURSOR VACCINIA VIRUS (STRAIN WR) 47-71 PVA41_VARV PROTEIN A41PRECURSOR VARIOLA VIRUS 47-71 PVA47_VACCC PROTEIN A47 VACCINIA VIRUS(STRAIN 59-79 201-226 COPENHAGEN) PVA47_VACCV PROTEIN A47 VACCINIA VIRUS(STRAIN WR) 59-79 201-226 PVA47_VARV PROTEIN A47 VARIOLA VIRUS 59-79201-226 PVA55-VACCC PROTEIN A55 VACCINIA VIRUS (STRAIN 247-266 384-404COPENHAGEN) PVA55_VACCV PROTEIN A55 VACCINIA VIRUS (STRAIN WR) 247-266384-404 PVAL1_BCTV AL1 PROTEIN BEET CURLY TOP VIRUS 56-75 VAL1_CLVK AL1PROTEIN CASSAVA LATENT VIRUS (STRAIN 55-74 WEST KENYAN 844) PVAL1_CLVNAL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 55-74 NIGERIAN) PVAL3_BCTV AL3PROTEIN BEET CURLY TOP VIRUS 82-108 PVAL3_CLVK AL3 PROTEIN CASSAVALATENT VIRUS (STRAIN 77-97 WEST KENYAN 844) PVAL3_CLVN AL3 PROTEINCASSAVA LATENT VIRUS (STRAIN 77-97 NIGERIAN) PVAL3_TYLCM AL3 PROTEINTOMATO YELLOW LEAF CURL 78-97 VIRUS (STRAIN MARMANDE) PVAL3_TYLCV AL3PROTEIN TOMATO YELLOW LEAF CURL 77-97 VIRUS PVAT_CAMVC APHIDTRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN CM-1841)PVAT_CAMVD APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN(STRAIN D/H) PVAT_CAMVE APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS134-157 PROTEIN (STRAIN BBC) PVAT_CAMVN APHID TRANSMISSION CAULIFLOWERMOSAIC VIRUS 134-157 PROTEIN (STRAIN NY8153) PVAT_CAMVP APHIDTRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN (STRAIN PV147)PVAT_CAMVS APHID TRANSMISSION CAULIFLOWER MOSAIC VIRUS 134-157 PROTEIN(STRAIN STRASBOURG) PVAT_CAMVW APHID TRANSMISSION CAULIFLOWER MOSAICVIRUS 34-60 PROTEIN (STRAIN W260) PVAT_CERV APHID TRANSMISSION CARNATIONETCHED RING VIRUS 141-161 PROTEIN PVAT_FMVD APHID TRANSMISSION FIGWORTMOSAIC VIRUS 132-159 PROTEIN (STRAIN DXS) PVB02_VACCC PROTEIN B2VACCINIA VIRUS (STRAIN 155-170 COPENHAGEN) PVB02_VACCV PROTEIN B2VACCINIA VIRUS (STRAIN WR) 155-170 PVB04_VACCC PROTEIN B4 VACCINIA VIRUS(STRAIN 155-170 COPENHAGEN) PVB04_VACCV PROTEIN B4 VACCINIA VIRUS(STRAIN WR) 489-511 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489-511PVB05_VACC0 PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN 251-271PROTEIN PRECURSOR LC16MO) PVB05_VACCC PLAQUE-SIZE/HOST RANGE VACCINIAVIRUS (STRAIN 251-271 PROTEIN PRECUROSR COPENHAGEN) PVB05_VACCLPLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN LISTER) 251-271 PROTEINPRECURSOR PVB05_VACCV PLAQUE-SIZE/HOST RANGE VACCINIA VIRUS (STRAIN WR)251-271 PROTEIN PRECURSOR PVB06_VACCV PROTEIN B6 VACCINIA VIRUS (STRAINWR) 59-82 AND (STRAIN COPENHAGEN) PVB15_VACCC PROTEIN B15 VACCINIA VIRUS(STRAIN 121-143 COPENHAGEN) PVB15_VACCV PROTEIN B15 VACCINIA VIRUS(STRAIN WR) 121-143 PVB15_VARV PROTEIN B15 VARIOLA VIRUS 121-143PVB17_VACCC PROTEIN B17 VACCINIA VIRUS (STRAIN 157-179 COPENHAGEN)PVB17_VACCV PROTEIN B17 VACCINIA VIRUS (STRAIN WR) PVBL1_CLVK BL1PROTEIN CASSAVA LATENT VIRUS (STRAIN 34-51 WEST KENYAN 844) PVBL1_CLVNBL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN 34-51 NIGERIAN) PVBL1_SLCV BL1PROTEIN SQUASH LEAF CURL VIRUS 245-268 PVBRL1_ABMVW BR1 PROTEIN ABUTILONMOSAIC VIRUS 166-191 (ISOLATE WEST INDIA) PVBR1_BGMV BR1 PROTEIN BEANGOLDEN MOSAIC VIRUS 166-191 PVBR1_PYMVV BR1 PROTEIN POTATO YELLOW MOSAICVIRUS 166-191 (ISOLATE VENEZUELA) PVBR1_SLCV BR1 PROTEIN SQUASH LEAFCURL VIRUS PVC01_VACCC PROTEIN C1 VACCINIA VIRUS (STRAIN 70-90COPENHAGEN) PVC01_VACCV PROTEIN C1 VACCINIA VIRUS (STRAIN WR) 75-95PVC01_VARV PROTEIN C1 VARIOLA VIRUS 58-78 PVC02_SFVKA HYPOTHETICALPROTEIN C2 SHOPE FIBROMA VIRUS 8-31 (STRAIN KASZA) PVC03_SFVKA G-PROTEINCOUPLED SHOPE FIBROMA VIRUS 98-123 179-197 RECEPTOR HOMOLOG C3 (STRAINKASZA) PVC04_VACCC PROTEIN C4 VACCINIA VIRUS (STRAIN 182-209 COPENHAGEN)PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 183-208 PVC05_SFVKAHYPOTHETICAL PROTEIN C6 SHOPE FIBROMA VIRUS 20-47 (STRAIN KASZA)PVC08_SFVKA HYPOTHETICAL PROTEIN C8 SHOPE FIBROMA VIRUS 14-30 (STRAINKASZA) PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN 40-59 COPENHAGEN)PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 40-59 PVC10_SFVKAHYPOTHETICAL PROTEIN C10 SHOPE FIBROMA VIRUS 85-109 (STRAIN KASZA)PVC10_VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN 42-64 COPENHAGEN)PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 42-64 PVC10_VARVPROTEIN C10 VARIOLA VIRUS 42-64 PVC16_VACCC PROTEIN C16/B22 VACCINIAVIRUS (STRAIN 41-68 COPENHAGEN) PVC17_VACCC PROTEIN C17/B23 VACCINIAVIRUS (STRAIN 301-326 COPENHAGEN) PVC21_VACCC PROTEIN C21/B27 VACCINIAVIRUS (STRAIN 3-28 COPENHAGEN) PVCAP_EBV MAJOR CAPSID PROTEINEPSTEIN-BARR VIRUS 148-172 366-381 1072-1095 (STRAIN B95-8) PVCAP_HCMVAMAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS 668-684 842-860 871-893(STRAIN AD169) PVCAP_HSV11 MAJOR CAPSID PROTEIN HERPES SIMPLEX VIRUS283-302 358-384 1137-1152 (TYPE 1/STRAIN 17) PVCAP_HSVEB MAJOR CAPSIDPROTEIN EQUINE HERPESVIRUS TYPE 1 357-383 872-898 (STRAIN AB4P)PVCAP_HSVSA MAJOR CAPSID PROTEIN HERPESVIRUS SAIMIRI 144-168 269-287357-372 1062-1089 (STRAIN 11) PVCAP_PRVIS MAJOR CAPSID PROTEINPSEUDORABIES VIRUS 335-362 (STRAIN INDIANA S) PVCAP_VZVD MAJOR CAPSIDPROTEIN VARICELLA-ZOSTER VIRUS 381-401 891-910 1156-1176 (STRAIN DUMAS)PVCG3_NPVAC DNA-BINDING PROTEIN AUTOGRAPHA CALIFORNICA 60-81 NUCLEARPOLYHEDROSIS VIRUS PVD03_VACCC PROTEIN D3 VACCINIA VIRUS (STRAIN 12-39COPENHAGEN) PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAIN WR) 12-39PVD03_VARV PROTEIN D3 VARIOLA VIRUS 12-39 PVD05_FOWP1 92 6 KD PROTEINFOWLPOX VIRUS (STRAIN FP-1) 246-265 315-337 PVD05_SFVKA PROTEIN D5 SHOPEFIBROMA VIRUS 54-78 171-198 (STRAIN KASZA) PVD05_VACCC PROTEIN D5VACCINIA VIRUS (STRAIN 320-340 694-714 715-734 COPENHAGEN) PVD05_VACCVPROTEIN D5 VACCINIA VIRUS (STRAIN WR) 320-340 694-714 715-734 PVD05_VARVPROTEIN D5 VARIOLA VIRUS 320-340 694-714 715-734 PVDBP_CAMVC DNA-BINDINGPROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN CM-1841) PVDBP_CAMVDDNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAIN D/H)PVDBP_CAMVE DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56 (STRAINBBC) PVDBP_CAMVN DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS 37-56(STRAIN NY8153) PVDBP_CAMVS DNA-BINDING PROTEIN CAULIFLOWER MOSAIC VIRUS37-56 (STRAIN STRASBOURG) PVE02_VACCC PROTEIN E2 VACCINIA VIRUS (STRAIN70-97 355-380 540-558 COPENHAGEN) PVE02_VACCV PROTEIN E2 VACCINIA VIRUS(STRAIN WR) 70-97 355-380 540-558 PVE02_VARV PROTEIN E2 VARIOLA VIRUS70-97 355-380 540-558 PVE05_VACCC PROTEIN E5 VACCINIA VIRUS (STRAIN314-329 COPENHAGEN) PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAIN324-339 DAIREN I) PVE05_VACCV PROTEIN E5 VACCINIA VIRUS (STRAIN WR)324-339 PVE05_VARV PROTEIN E5 VARIOLA VIRUS 324-339 PVE06_VACCC PROTEINE6 VACCINIA VIRUS (STRAIN 430-451 COPENHAGEN) PVE06_VACCV PROTEIN E6VACCINIA VIRUS (STRAIN WR) 430-451 PVE06_VARV PROTEIN E6 VARIOLA VIRUS251-267 430-451 PVE08_VACCC PROTEIN E8 VACCINIA VIRUS (STRAIN 254-270COPENHAGEN) PVEO8_VACCV PROTEIN E8 VACCINIA VIRUS (STRAIN WR) 254-270PVE08_VARV PROTEIN E8 VARIOLA VIRUS 254-270 PVE12_HPV16 PROBABLE E1PROTEIN 2 HUMAN PAPILLOMAVIRUS 167-183 TYPE 16 PVE18_NPVAC EARLY 18 5 KDPROTEIN AUTOGRAPHA CALIFORNICA 106-113 NUCLEAR POLYHEDROSIS VIRUSPVE1_BPV1 E1 PROTEIN BOVINE PAPILLOMAVIRUS 265-282 517-533 TYPE 1PVE1_BPV2 E1 PROTEIN BOVINE PAPILLOMAVIRUS 265-281 516-532 TYPE 2PVE1_CRPVK E1 PROTEIN COTTONTAIL RABBIT (SHOPE) 7-22 PAPILLOMAVIRUS(STRAIN KANSAS) PVE1_HPV11 E1 PROTEIN HUMAN PAPILLOMAVIRUS 258-275311-334 TYPE 11 PVE1_HPV13 E1 PROTEIN HUMAN PAPILLOMAVIRUS 308-324 TYPE13 PVE1_HPV18 E1 PROTEIN HUMAN PAPILLOMAVIRUS 264-281 317-333 344-364TYPE 18 PVE1_HPV31 E1 PROTEIN HUMAN PAPILLOMAVIRUS 237-254 TYPE 31PVE1_HPV33 E1 PROTEIN HUMAN PAPILLOMAVIRUS 238-260 TYPE 33 PVE1_HPV39 E1PROTEIN HUMAN PAPILLOMAVIRUS 334-354 TYPE 39 PVE1_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS 363-380 TYPE 41 PVE1_HPV42 E1 PROTEIN HUMANPAPILLOMAVIRUS 304-320 TYPE 42 PVE1_HPV58 E1 PROTEIN HUMANPAPILLOMAVIRUS 238-260 TYPE 58 PVE1_HPV6B E1 PROTEIN HUMANPAPILLOMAVIRUS 258-275 311-334 TYPE 6B PVE1_PCPV1 E1 PROTEIN PYGMYCHIMPANZEE 257-274 310-326 PAPILLOMAVIRUS TYPE 1 PVE1_RHPV1 E1 PROTEINRHESUS PAPILLOMAVIRUS TYPE 1 286-309 PVE2_CRPVK PROBABLE E2 PROTEINCOTTONTAIL RABBIT (SHOPE) 308-333 PAPILLOMAVIRUS (STRAIN KANSAS)PVE2_HPV11 E2 PROTEIN HUMAN PAPILLOMAVIRUS 285-310 TYPE 11 PVE2_HPV13 E2PROTEIN HUMAN PAPILLOMAVIRUS 295-320 TYPE 13 PVE2_HPV18 E2 PROTEIN HUMANPAPILLOMAVIRUS 288-306 TYPE 18 PVE2_HPV1A E2 PROTEIN HUMANPAPILLOMAVIRUS 284-300 TYPE 1A PVE2_HPV2A E2 PROTEIN HUMANPAPILLOMAVIRUS 311-336 TYPE 2A PVE2_HPV31 E2 PROTEIN HUMANPAPILLOMAVIRUS 294-312 TYPE 31 PVE2_HPV35 E2 PROTEIN HUMANPAPILLOMAVIRUS 275-293 TYPE 33 PVE2_HPV33 E2 PROTEIN HUMANPAPILLOMAVIRUS 289-307 TYPE 35 PVE2_HPV39 E2 PROTEIN HUMANPAPILLOMAVIRUS 292-310 TYPE 39 PVE2_HPV42 E2 PROTEIN HUMANPAPILLOMAVIRUS 321-338 TYPE 42 PVE2_HPV57 E2 PROTEIN HUMANPAPILLOMAVIRUS 303-328 TYPE 57 PVE2_HPV6B E2 PROTEIN HUMANPAPILLOMAVIRUS 286-311 TYPE 6B PVE2_PAPVD PROBABLE E2 PROTEIN DEERPAPIOLMAVIRUS 333-351 PVE2_PCPV1 E2 PROTEIN PYGMY CHIMPANZEE 295-320PAPILLOMAVIRUS TYPE 1 PVE2_RHPV1 E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1290-308 PVE4_HPV18 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 39-59 TYPE18 PVE4_HPV41 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 56-76 TYPE 41PVE4_HPV51 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 59-83 TYPE 51PVE4_RHPV1 PROBABLE E4 PROTEIN HUMAN PAPILLOMAVIRUS 63-87 TYPE 1PVE5A_HPV11 PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 11PVE5A_HPV6C PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 6CPVE5_BPV1 E5 PROTEIN BOVINE PAPILLOMAVIRUS 2-26 TYPE 1 AND TYPE 2PVE5_HPV13 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 19-42 TYPE 13PVE5_HPV31 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 31-52 TYPE 31PVE5_HPV42 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 45-65 TYPE 42PVE5_HPV51 PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 31-52 TYPE 51PVE5_HPV5B PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS 89-113 TYPE 5BPVE5_RHPV1 PROBABLE E5 PROTEIN RHESUS PAPILLOMAVIRUS 109-132 TYPE 1PVE6_BPV1 56 PROTEIN BOVINE PAPILLOMAVIRUS 23-41 TYPE 1 PVE6_CRPVK E6PROTEIN COTTONTAIL RABBIT (SHOPE) 6-23 PAPILLOMAVIRUS (STRAIN KANSAS)PVE6_HPV08 E6 PROTEIN HUMAN PAPILLOMAVIRUS 133-151 TYPE 8 PVE6_HPV2A E6PROTEIN HUMAN PAPILLOMAVIRUS 8-27 TYPE 2A PVE6_HPV33 E6 PROTEIN HUMANPAPILLOMAVIRUS 9-26 TYPE 33 PVE6_HPV35 E6 PROTEIN HUMAN PAPILLOMAVIRUS9-26 TYPE 35 PVE6_HPV51 E6 PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 51PVE6_HPV57 E6 PROTEIN HUMAN PAPILLOMAVIRUS 8-27 TYPE 57 PVE6_HPV58 E6PROTEIN HUMAN PAPILLOMAVIRUS 9-26 TYPE 58 PVE6_MMPV E6 PROTEIN MICROMYSMINUTUS 7-33 36-60 PAPILLOMAVIRUS PVE7_CRPVK E7 PROTEIN COTTONTAILRABBIT (SHOPE) 71-88 PAPILLOMAVIRUS (STRAIN KANSAS) PVE7_HPV13 E7PROTEIN HUMAN PAPILLOMAVIRUS 77-93 TYPE 13 PVE7_HPV51 E7 PROTEIN HUMANPAPILLOMAVIRUS 61-87 TYPE 51 PVE7_HPV6B E7 PROTEIN HUMAN PAPILLOMAVIRUS20-37 TYPE 6B PVE7_RHPV1 E7 PROTEIN RHESUS PAPILLOMAVIRUS 79-105 TYPE 1PVE94_NPVAC EARLY 94 KD PROTEIN AUTOGRAPHA CALIFORNICA 78-99 203-222NUCLEAR POLYHEDROSIS VIRUS PVEF_GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIANI GRANULOSIS 154-175 237-260 677-696 VIRUS PVENV_BEV ENVELOPE PROTEINBERNE VIRUS 62-86 87-114 PVENV_DHV11 ENVELOPE GLYCOPROTEIN DHORI VIRUS(STRAIN 42-57 484-511 PRECURSOR INDIAN/1313/61) PVENV_EAV PROBABLEENVELOPE EQUINE ARTERITIS VIRUS 25-41 PROTEIN PVENV_LELV PROBABLEENVELOPE LELYSTAD VIRUS 27-47 148-168 PROTEIN PVENNV_MCV1 MAJOR ENVELOPEPROTEIN MOLLUSCUM CONTAGIOSUM 61-80 VIRUS SUBTYPE 1 PVENV_MCV2 MAJORENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM 61-80 306-333 VIRUS SUBTYPE 1PVENV_THOGV ENVELOPE GLYCOPROTEIN THOGOTO VIRUS 196-221 356-383 473-491PRECURSOR PVETM_NPVAC ECORI-T SITE PROTEIN ETM AUTOGRAPHA CALIFORNICA82-105 NUCLEAR POLYHEDROSIS VIRUS PVF05_VACCC 36 KD MAJOR MEMBRANEVACCININA VIRUS (STRAIN 280-305 PROTEIN PRECURSOR COPENHAGEN)PVF05_VACCP 36 KD MAJOR MEMBRANE VACCINIA VIRUS (STRAIN L-IVP) 280-305PROTEIN PRECURSOR PVF05_VACCV 36 KD MAJOR MEMBRANE VACCINIA VIRUS(STRAIN WR) 281-306 PROTEIN PRECURSOR PVF05_VARV 36 KD MAJOR MEMBRANEVARIOLA VIRUS 280-305 PROTEIN PRECURSOR PVF09_VACCC PROTEIN F9 VACCINIAVIRUS (STRAIN 176-200 COPENHAGEN), AND (STRAIN L-IVP) PVF09_VACCVPROTEIN F9 VACCINIA VIRUS (STRAIN WR) 176-200 PVF09_VARV PROTEIN F9VARIOLA VIRUS 176-200 PFV11_VACCC PROTEIN F11 VACCINIA VIRUS (STRAIN161-184 COPENHAGEN) PVF11_VARV PROTEIN F11 VARIOLA VIRUS 161-184PVF15_VACCC PROTEIN F15 VACCINIA VIRUS (STRAIN 25-48 COPENHAGEN)PVF15_VACCP PROTEIN F15 VACCINIA VIRUS (STRAIN L-IVP) 3-26 PVF15_VARVPROTEIN F15 VARIOLA VIRUS 28-51 PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS297-333 PVFP2_FOWPV PROTEIN FP2 FOWLPOX VIRUS 88-104 PVFP7_CAPVK PROTEINF7 CAPRIPOXIVIRUS (STRAIN KS-1) 89-111 PVFP7_FOWPV PROTEIN FP7 FOWLPOXVIRUS 65-90 PVFP8_CAPVK CF8A PROTEIN CAPRIPOXVIRUS (STRAIN KS-1) 51-76PVFUS_ORFNZ 10 KD FUSION PROTEIN ORF VIRUS (STRAIN NZ2) 29-48PVFUS_VACC6 14 KD FUSION PROTEIN VACCINIA VIRUS (STRAIN 72-94 WR 65-16)PVG01_HSVEB HYPOTHETICAL GENE 1 EQUINE HERPESVIRUS TYPE 1 169-195PROTEIN (STRAIN AB4P) PVG01_HSV11 HYPOTHETICAL GENE 1 ICTALURIDHERPESVIRUS 1 210-225 317-339 589-616 PROTEIN PVG01_VACCC PROTEIN G1VACCINIA VIRUS (STRAIN 298-318 376-395 COPENHAGEN) PVG01_VACCV PROTEING1 VACCINIA VIRUS (STRAIN WR) 237-257 315-334 PVG01_VARV PROTEIN G1VARIOLA VIRUS 298-318 376-395 PVG01_VZVD HYPOTHETICAL GENE 1VARICELLA-ZOSTER VIRUS 58-82 PROTEIN (STRAIN DUMAS) PVG03_VACCC PROTEING3 VACCINIA VIRUS (STRAIN 50-72 COPENHAGEN) PVG03_VARV PROTEIN G3VARIOLA VIRUS 50-72 PVG04_VACCC PROTEIN G4 VACCINIA VIRUS (STRAIN 11-33COPENHAGEN) PVG04_VARV PROTEIN G4 VARIOLA VIRUS 11-33 PVG06_VACCCPROTEIN G6 VACCINIA VIRUS (STRAIN 31-51 COPENHAGEN) PVG06_VARV PROTEING6 VARIOLA VIRUS 31-51 PVG08_HSV11 HYPOTHETICAL GENE 8 ICTALURIDHERPESVIRUS 1 134-149 159-185 MEMBRANE PROTEIN PVG10_HSV11 HYPOTHETICALGENE 10 ICTALURID HERPESVIRUS 1 35-54 MEMBRANE PROTEIN PVG10_HSVSAHERPESVIRUS SAIMIRI HERPESVIRUS SAIMIRI 109-124 355-379 (STRAIN 11)PVG11_HSV11 HYPOTHETICAL GENE 11 ICTALURID HERPESVIRUS 1 103-122 150-176ZINE-BINDING PROTEIN PVG12_HSV11 HYPOTHETICAL GENE 12 ICTALURIDHERPESVIRUS 1 151-178 270-286 ZINC-BINDING PROTEIN PVG12_HSVSAHYPOTHETICAL GENE 12 HERPESVIRUS SAIMIRI 68-92 PROTEIN (STRAIN 11)PVG19_HSV11 HYPOTHETICAL GENE 19 ICTALURID HERPESVIRUS 1 88-112 MEMBRANEPROTEIN PVG1L_AMEPV G1L PROTEIN AMSACTA MOOREI 313-336 ENTOMOPOXVIRUSPVG1_SPV1R CAPSID PROTEIN SPIROPLASMA VIRUS 76-92 659-678 SPV1-R8A2 BPVG22_HSV11 HYPOTHETICAL GENE 22 ICTALURID HERPESVIRUS 1 300-327 PROTEINPVG23_HSV11 HYPOTHETICAL GENE 23 ICTALURID HERPESVIRUS 1 314-335 PROTEINPVG27_HSV11 HYPOTHETICAL GENE 27 ICTALURID HERPESVIRUS 1 158-184 PROTEINPVG27_HSVSA HYPOTHETICAL GENE 27 HERPESVIRUS SAIMIRI 209-226 PROTEIN(STRAIN 11) PVG28_HSV11 HYPOTHETICAL GENE 28 ICTALURID HERPESVIRUS 1173-197 491-518 PROTEIN PVG28_HSVSA HYPOTHETICAL GENE 28 HERPESVIRUSSAIMIRI 14-40 PROTEIN (STRAIN 11) PVG29_HSV11 HYPOTHETICAL GENE 29ICTALURID HERPESVIRUS 1 20-42 PROTEIN PVG30_HSV11 HYPOTHETICAL GENE 30ICTALURID HERPESVIRUS 1 166-191 PROTEIN PVG32_VZVD GENE 32 PROTEINVARICELLA-ZOSTER VIRUS 90-109 (STRAIN DUMAS) PVG36_HSVSA POSSIBLETYROSINE- HERPESVIRUS SAIMIRI 108-123 344-362 PROTEIN KINASE (STRAIN 11)PVG37_HSV11 HYPOTHETICAL GENE 37 ICTALURID HERPESVIRUS 1 284-299 PROTEINPVG39_HSV11 HYPOTHETICAL GENE 39 ICTALURID HERPESVIRUS 1 648-675 970-9901038-1065 PROTEIN PVG40_HSV11 HYPOTHETICAL GENE 40 ICTALURID HERPESVIRUS1 14-32 PROTEIN PVG41_HSV11 HYPOTHETICAL GENE 41 ICTALURID HERPESVIRUS 111-38 62-81 244-260 PROTEIN PVG43_HSV11 HYPOTHETICAL GENE 43 ICTALURIDHERPESVIRUS 1 109-133 157-178 322-345 521-538 PROTEIN PVG46_HSV11PROBABLE MAJOR ICTALURID HERPESVIRUS 1 134-156 580-607 937-963 1244-1270GLYCOPROTEIN PVG48_HSV11 HYPOTHETICAL GENE 48 ICTALURID HERPESVIRUS 171-93 PROTEIN PVG50_HSVSA PROB TRANSCRIPTION HERPESVIRUS SAIMIRI 5-3058-83 ACTIVATOR EDRF1 (STRAIN 11) PVG51_HSV11 HYP GENE 51 MEMBRANEICTALURID HERPESVIRUS 1 29-49 84-102 PROTEIN PVG52_HSV11 HYPOTHETICALGENE 52 ICTALURID HERPESVIRUS 1 229-252 PROTEIN PVG55_HSV11 HYPOTHETICALGENE 55 ICTALURID HERPESVIRUS 1 22-37 143-158 288-309 PROTEINPVG55_HSVSA HYPOTHETICAL GENE 55 HERPESVIRUS SAIMIRI 85-106 PROTEIN(STRAIN 11) PVG56_HSV11 HYPOTHETICAL GENE 56 ICTALURID HERPESVIRUS 11155-1176 PROTEIN PVG58_HSVSA GENE 58 PROTEIN HERPESVIRUS SAIMIRI130-146 266-288 293-319 330-346 (STRAIN 11) PVG59_HSV11 HYP GENE 59MEMBRANE ICTALURID HERPESVIRUS 1 142-161 267-289 PROTEIN PVG5_SPV4 GENE5 PROTEIN SPIROPLASMA VIRUS 4 42-64 PVG60_HSV11 HYPOTHETICAL GENE 60ICTALURID HERPESVIURS 1 30-51 53-75 PROTEIN PVG61_HSV11 HYPOTHETICALGENE 61 ICTALURID HERPESVIRUS 1 76-102 117-136 PROTEIN PVG63_HSV11HYPOTHETICAL GENE 63 ICTALURID HERPESVIRUS 1 238-259 336-363 PROTEINPVG64_HSV11 HYPOTHETICAL GENE 64 ICTALURID HERPESVIRUS 1 420-445 PROTEINPVG65_HSV11 HYPOTHETICAL GENE 65 ICTALURID HERPESVIRUS 1 117-137 155-173362-378 518-533 1147-1174 1347-1369 PROTEIN PVG67_HSV11 HYPOTHETICALGENE 67 ICTALURID HERPESVIRUS 1 108-132 171-188 318-344 722-745>1005-1029 1072-1091 1315-1341 PROTEIN PVG6_SPVIR GENE 6 PROTEINSPIROPLASMA VIRUS 60-82 SPV1-R8A2 B PVG70_HSV11 HYPOTHETICAL GENE 70ICTALURID HERPESVIRUS 1 184-209 PROTEIN PVG71_HSVSA HYPOTHETICAL GENE 63HERPESVIRUS SAIMIRI 89-105 PROTEIN (STRAIN 11) PVG72_HSV11 HYPOTHETICALGENE 72 ICTALURID HERPESVIRUS 1 445-471 535-561 720-744 1252-1269PROTEIN PVG74_HSVSA G-PROTEIN COUPLED REC HERPESVIRUS SAIMIRI 124-151HOMOLOG ECRF3 (STRAIN 11) PVG9_SPV1R GENE 9 PROTEIN SPIROPLASMA VIRUS57-72 SPV1-R8A2 B PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS1587-1606 1856-1877 2108-2127 2210-2226 2788-2806 2973-2999 3073-30903120-3145 3374-3399 VIRUS (STRAIN BEAUDETTE) 3601-3625 PVGH3_HCMVAGLYCOPROTEIN H301 HUMAN CYTOMEGALOVIRUS 157-178 PRECURSOR (STRAIN AD169)PVGL1_CVPR8 E1 GLYCOPROTEIN PORCINE RESPIRATORY 174-193 PRECURSORCORONAVIRUS (STRAIN 86/137004/BRITISH IS) PVGL2_CVBF E2 GLYCOPROTEINBOVINE CORONAVIRUS 10-33 123-139 174-190 264-279 991-1017 1259-1280PRECURSOR (STRAIN F15) PVGL2_CVBL9 E2 GLYCOPROTEIN BOVINE CORONAVIRUS123-139 174-190 264-279 651-674 991-1017 1259-1280 PRECURSOR (STRAIN L9)PVGL2_CVBLY E2 GLYCOPROTEIN BOVINE CORONAVIRUS 10-33 123-139 174-190264-279 991-1017 1259-1280 PRECURSOR (STRAIN LY-138) PVGL2_CVBM E2GLYCOPROTEIN BOVINE CORONAVIRUS 123-139 174-190 264-279 991-10171259-1280 PRECURSOR (STRAIN MEBUS) PVGL2_CVBQ E2 GLYCOPROTEIN BOVINECORONAVIRUS 31-47 123-139 174-190 264-279 991-1017 1259-1280 PRECURSOR(STRAIN QUEBEC) PVGL2_CVBV E2 GLYCOPROTEIN BOVINE CORONAVIRUS 123-139174-190 264-279 991-1017 1259-1280 PRECURSOR (STRAIN VACCINE)PVGL2_CVH22 E2 GLYCOPROTEIN HUMAN CORONAVIRUS 768-794 1053-10711115-1134 PRECURSOR (STRAIN 229E) PVGL2_CVM4 E2 GLYCOPROTEIN MURINECORONAVIRUS 95-111 999-1025 1267-1290 1317-1338 PRECURSOR (STRAIN WILDTYPE 4) PVGL2_CVMA5 E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111 947-9731215-1238 1265-1286 PRECURSOR (STRAIN A59) PVGL2_CVMJC E2 GLYCOPROTEINMURINE CORONAVIRUS 95-111 999-1025 1267-1290 1317-1358 PRECURSOR (STRAINJHMV/VARIANT CL-2) PVGL2_CVMJH E2 GLYCOPROTEIN MURINE CORONAVIRUS 95-111858-884 1126-1149 1176-1197 PRECURSOR (STRAIN JHM) PVGL2_CVPFS E2GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 442-457 800-816 1038-10641274-1297 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAI) PVGL2_CVPMI E2GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 442-457 506-521 800-8161038-1064 1274-1297 PRECURSOR GASTROENTERITIS CORONAVIRUS (STRAI)PVGL2_CVPPR E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 440-455 504-519798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITIS CORONAVIRUS(STRAI) PVGL2_CVPPU E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 74-83 440-455504-519 798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITISCORONAVIRUS (STRAI) PVGL2_CVPR8 E2 GLYCOPROTEIN PORCINE RESPIRATORY219-233 576-592 814-840 1050-1073 PRECURSOR CORONAVIRUS (STRAI)86/137004/BRITISH I PVGL2_CVPRM E2 GLYCOPROTEIN PORCINE RESPIRATORY218-233 576-592 814-840 1050-1073 PRECURSOR CORONAVIRUS (STRAIN RM4)PVGL2_CVPRT E2 GLYCOPROTEIN PORCINE TRANSMISSIBLE 64-83 440-455 504-519798-814 1036-1062 1272-1295 PRECURSOR GASTROENTERITIS CORONAVIRUS(STRAI) PVGL2_FIPV E2 GLYCOPROTEIN FELINE INFECTIOUS PERITONITIS 803-8191041-1067 1277-1300 PRECURSOR VIRUS (STRAIN 79-1146) PVGL2_IBV6 E2GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 196-219 588-607 771-7971056-1081 1094-1111 PRECURSOR VIRUS (STRAIN 6/82) PVGL2_IBVB E2GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195-218 587-606 770-7961055-1080 PRECURSOR VIRUS (STRAIN BEAUDETTE) PVGL2_IBVD2 E2 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS 196-219 588-607 771-797 1056-1081 PRECURSORVIRUS (STRAIN D274) ( PVGL2_IBVD3 E2 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS 196-219 PRECURSOR VIRUS (STRAIN D3896) PVGL2_IBVK E2GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 195-218 587-606 770-7961055-1080 PRECURSOR VIRUS (STRAIN KB8523) PVGL2_IBVM E2 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS 195-218 378-398 587-606 770-796 1055-1080PRECURSOR VIRUS (STRAIN M41) PVGL2_IBVU1 E2 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS 178-201 VIRUS (STRAIN UK/123/82) PVGL2_IBVU2 E2GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 178-201 VIRUS (STRAINUK/142/86) PVGL2_IBVU3 E2 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS178-201 VIRUS (STRAIN UK/167/84) PVGLB_EBV GLYCOPROTEIN GP110EPSTEIN-BARR VIRUS 732-752 PRECURSOR (STRAIN B95-8) PVGLB_HCMVAGLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 535-558 706-732 750-777 PRECURSOR(STRAIN AD169) PVGLB_HCMVT GLYCOPROTEIN B HUMAN CYTOMEGALOVIRUS 536-559707-733 751-778 PRECURSOR (STRAIN TOWNE) PVGLB_HSV11 GLYCOPROTEIN BHERPES SIMPLEX VIRUS 83-104 PRECURSOR (TYPE 1/STRAIN 17) PVGLB_HSV1FGLYCOPROTEIN B HERPES SIMPLEX VIRUS 82-103 PRECURSOR (TYPE 1/STRAIN F)PVGLB_HSV1K GLYCOPROTEIN B HERPES SIMPLEX VIRUS 82-103 PRECURSOR (TYPE1/STRAIN KOS) PVGLB_HSV1P GLYCOPROTEIN B HERPES SIMPLEX VIRUS 83-104PRECURSOR (TYPE 1/STRAIN PATTON) PVGLB_HSV23 GLYCOPROTEIN B HERPESSIMPLEX VIRUS 79-99 PRECURSOR (TYPE 2/STRAIN 333)/ PVGLB_HSV2HGLYCOPROTEIN B HERPES SIMPLEX VIRUS 79-99 PRECURSOR (TYPE 2/STRAIN HG52)PVGLB_HSV2S GLYCOPROTEIN B HERPES SIMPLEX VIRUS 65-85 PRECURSOR (TYPE2/STRAIN 54A) PVGLB_HSV6U GLYCOPROTEIN B HERPES SIMPLEX VIRUS 72-92117-144 (FRAGMENT) (TYPE 6/STRAIN UGANDA-1102) PVGLB_HSVB1 GLYCOPROTEIN1 BOVINE HERPESVIRUS TYPE 1 560-578 689-707 PRECURSOR PVGLB_HSVB2GLYCOPROTEIN B-1 BOVINE HERPESVIRUS TYPE 2 279-299 745-767 PRECURSOR(STRAIN BMV) (BOVINE MAMMILLITIS) PVGLB_HSVBC GLYCOPROTEIN 1 BOVINEHERPESVIRUS TYPE 1 692-710 PRECURSOR (STRAIN COPPER) PVGLB_HSVE1GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (ISOLATEHVS25A) (EHV-1) PVGLB_HSVE4 GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1675-692 PRECURSOR (STRAIN AB1) PVGLB_HSVEA GLYCOPROTEIN B EQUINEHERPESVIRUS TYPE 1 736-753 PRECURSOR (STRAIN AB1) PVGLB_HSVEBGLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR (STRAIN AB4P)PVGLB_HSVEL GLYCOPROTEIN B EQUINE HERPESVIRUS TYPE 1 736-753 PRECURSOR(STRAIN KENTUCKY D) PVGLB_HSVMD GLYCOPROTEIN B MAREK'S DISEASEHERPESVIRUS 589-613 PRECURSOR (STRAIN RB-1B) PVGLB_HSVSA GLYCOPROTEIN BHERPESVIRUS SAIMIRI 483-506 584-602 701-716 PRECURSOR (STRAIN 11)PVGLB_ILTV6 GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEI- 256-275 597-621740-758 PRECURSOR TIS VIRUS (STRAIN 632) PVGLB_ILTVS GLYCOPROTEIN BINFECTIOUS LARYNGOTRACHEI- 266-285 607-631 750-768 PRECURSOR TIS VIRUS(STRAIN SA-2) PVGLB_ILTVT GLYCOPROTEIN B INFECTIOUS LARYNGOTRACHEI-266-285 607-631 750-768 PRECURSOR TIS VIRUS (STRAIN THRONE V882)PVGLB_MCMVS GLYCOPROTEIN B MURINE CYTOMEGALOVIRUS 135-156 566-589738-765 PRECURSOR (STRAIN SMITH) PVGLB_PRVIF GLYCOPROTEIN GIIPSEUDORABIES VIRUS (STRAIN 203-218 PRECURSOR INDIANA-FUNKHAUSER/BECKER)PVGLB_VZVD GLYCOPROTEIN B VARICELLA-ZOSTER VIRUS 522-538 PRECURSOR(STRAIN DUMAS) PVGLC_HSV11 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 3-22467-493 PRECURSOR (TYPE 1/STRAIN 17) PVGLC_HSV1K GLYCOPROTEIN C HERPESSIMPLEX VIRUS 3-22 467-491 PRECURSOR (TYPE 1/STRAIN 17) PVGLV_HSV2GLYCOPROTEIN C HERPES SIMPLEX VIRUS 435-458 PRECURSOR (TYPE 2)PVGLC_HSV23 GLYCOPROTEIN C HERPES SIMPLEX VIRUS 436-459 PRECURSOR (TYPE2/STRAIN 333) PVGLC_HSVBC GLYCOPROTEIN GII BOVINE HERPESVIRUS TYPE 1475-494 PRECURSOR (STRAIN COOPER) PVGLC_HSVE4 GLYCOPROTEIN C EQUINEHERPESVIRUS TYPE 4 444-459 PRECURSOR (STRAIN 1942) PVGLC_HSVEBGLYCOPROTEIN C EQUINE HERPESVIRUS TYPE 1 427-442 PRECURSOR (STRAIN AB4P)AND (STRAIN KENTUCKY) PVGLC_HSVMB SECRETORY GLYCOPROTEIN MAREK'S DISEASEHERPESVIRUS 399-421 GP57-65 PRECURSOR (STRAIN BC-1) PVGLC_HSVMDSECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399-421 GP57-65PRECURSOR (STRAIN RB-1B) PVGLC_HSVMG SECRETORY GLYCOPROTEIN MAREK'SDISEASE HERPESVIRUS 398-420 GP57-65 PRECURSOR (STRAIN GA) PVGLC_HSVMMSECRETORY GLYCOPROTEIN MAREK'S DISEASE HERPESVIRUS 399-421 GP57-65PRECURSOR (STRAIN MD5) PVGLC_PRVIF GLYCOPROTEIN GIII PSEUDORABIES VIRUS(STRAIN 180-197 446-472 PRECURSOR INDIANA-FUNKHAUSER/BECKER) PVGLC_VZVDGLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431-449 (STRAIN DUMAS)PVGLC_VZVS GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS 431-449 (STRAINSCOTT) PCGLD_HSV11 GLYCOPROTEIN D HERPES SIMPLEX VIRUS 79-94 PRECURSOR(TYPE 1/STRAIN 17), AND (TYPE 1/STRAIN PVGLD_HSV2 GLYCOPROTEIN D HERPESSIMPLEX VIRUS 79-94 PRECURSOR (TYPE 2) PVGLE_HSV11 GLYCOPROTEIN E HERPESSIMPLEX VIRUS 104-129 413-437 PRECURSOR (TYPE 1/STRAIN 17) PVGLE_VZVDGLYCOPROTEIN E VARICELLA-ZOSTER VIRUS 469-493 PRECURSOR (STRAIN DUMAS)PFGLF_BRSVA FUSION GLYCOPROTEIN BOVINE RESPIRATORY 205-221 265-287482-504 PRECURSOR SYNCYTIAL VIRUS (STRAIN A51908) PVGLF_BRSVC FUSIONGLYCOPROTEIN BOVINE RESPIRATORY 205-221 265-280 284-506 PRECURSORSYNCYTIAL VIRUS (STRAIN COPENHAGEN) PVGLF_BRSVR FUSION GLYCOPROTEINBOVINE RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS(STRAIN RB94) PVGLF_CDVO FUSION GLYCOPROTEIN CANINE DISTEMPER VIRUS336-361 398-414 562-589 PRECURSOR (STRAIN ONDERSTEPOORT) PVGLF_HRSV1FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSORSYNCYTIAL VIRUS (SUBGROUP B/ STRAIN 185) PVGLF_HRSVA FUSION GLYCOPROTEINHUMAN RESPIRATORY 205-221 265-280 484-506 PRECURSOR SYNCYTIAL VIRUS(STRAIN A2) PVGLF_HRSVL FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221265-280 484-506 PRECURSOR SYNCYTIAL VIRUS (SUBGROUP A/ STRAIN LO)PVGLF_HRSVR FUSION GLYCOPROTEIN HUMAN RESPIRATORY 205-221 265-280484-506 PRECURSOR SYNCYTIAL VIRUS (STRAIN RSS-2) PVGLF_MEASE FUSIONGLYCOPROTEIN MEASLES VIRUS (STRAIN 224-245 286-302 451-477 PRECURSOREDMONSTON) and (STRAIN HALLE) PVGLF_MEAS1 FUSION GLYCOPROTEIN MEASLESVIRUS (STRAIN IP-3-CA) 227-248 289-305 454-480 PRECURSOR PVGLF_MEASYFUSION GLYCOPROTEIN MEASLES VIRUS (STRAIN 224-245 286-302 451-477PRECURSOR YAMAGATA-1) PVGLF_MUMP1 FUSION GLYCOPROTEIN MUMPS VIRUS(STRAIN SBL-1) 5-20 276-292 446-467 PRECURSOR PVGLF_MUMPM FUSIONGLYCOPROTEIN MUMPS VIRUS (STRAIN 276-292 446-467 PRECURSOR MIYAHARAVACCINE) PVGLF_MUMPR FUSION GLYCOPROTEIN MUMPS VIRUS (STRAIN RW) 276-292446-467 PRECURSOR PVGLF_MUMPS FUSION GLYCOPROTEIN MUMPS VIRUS (STRAINSBL) 5-20 276-292 446-467 PRECURSOR PVGLF_NDVA FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN AUSTRALIA-VICTORIA/32) PVGLF_NDVB FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS273-289 PRECURSOR (STRAIN BEAUDETTE C/45) PVGLF_NDVH3 FUSIONGLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN HER/33)PVGLF_NDVH4 FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289PRECURSOR (STRAIN B1-HITCHNER/47) PVGLF_NDVL FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN LAS/46) PVGLF_NDVMFUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAINMIYADERA/51) PVGLF_NDVQ FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS273-289 PRECURSOR (STRAIN QUEENSLAND/66) PVGLF_NDVT FUSION GLYCOPROTEINNEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAIN TEXAS) PVGLF_NDTVGFUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS 273-289 PRECURSOR (STRAINTEXAS G B/48) PVGLF_NDVU FUSION GLYCOPROTEIN NEWCASTLE DISEASE VIRUS273-289 PRECURSOR (STRAIN ULSTER/67) PVGLF_PHODV FUSION GLYCOPROTEINPHOCINE DISTEMPER VIRUS 269-285 305-326 367-383 531-558 PRECURSORPVGLF_P11HC FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 1 VIRUS 456-477PRECURSOR (STRAIN C39) PVGLF_P12H FUSION GLYCOPROTEIN HUMANPARAINFLUENZA 2 VIRUS 450-471 PRECURSOR (PIV-2) PVGLF_P12HG FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS 450-471 PRECURSOR (STRAINGREER) PVGLF_P12HT FUSION GLYCOPROTEIN HUMAN PARAINFLUENZA 2 VIRUS450-471 PRECURSOR (STRAIN TOSHIBA) PVGLF_P13B FUSION GLYCOPROTEIN BOVINEPARAINFLUENZA 3 VIRUS 405-426 453-474 PRECURSOR PVGLF_P13H4 FUSIONGLYCOPROTEIN HUMAN PARAINFLUENZA 3 VIRUS 2-20 283-310 453-474 PRECURSOR(STRAIN N1H 47885) PVGLF_RINDK FUSION GLYCOPROTEIN RINDERPEST VIRUS(STRAIN 220-241 282-298 447-473 PRECURSOR KABETE O) PVGLF_RINDL FUSIONGLYCOPROTEIN RINDERPEST VIRUS (STRAIN L) 220-241 282-298 447-473PRECURSOR PVGLF_SEND5 FUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN Z/460-481 PRECURSOR HOST MUTANTS) PVGLF_SENDF FUSION GLYCOPROTEIN SENDAIVIRUS (STRAIN FUSHIMI) 460-481 PRECURSOR PVGLF_SENDH FUSION GLYCOPROTEINSENDAI VIRUS (STRAIN HARRIS) 460-481 PRECURSOR PVGLF_SENDJ FUSIONGLYCOPROTEIN SENDAI VIRUS (STRAIN HVJ) 460-481 PRECURSOR PVGLF_SENDZFUSION GLYCOPROTEIN SENDAI VIRUS (STRAIN 2) 460-481 PRECURSOR PCGLF_SV41FUSION GLYCOPROTEIN SIMIAN VIRUS 41 453-474 PRECURSOR PVGLF_SV5 FUSIONGLYCOPROTEIN SIMIAN VIRUS 5 (STRAIN W3) 401-425 446-467 PRECURSORPVGLF_TRTV FUSION GLYCOPROTEIN TURKEY RHINOTRACHEITIS 175-191 452-474PRECURSOR VIRUS PVGLG_INHV SPIKE GLYCOPROTEIN INFECTIOUS HEMATOPOIETIC77-99 PRECURSOR NECROSIS VIRUS (STRAIN ROUND BUT) PVGLG_RABVE SPIKEGLYCOPROTEIN RABIES VIRUS (STRAIN ERA) 454-474 PRECURSOR PVGLG_RABVHSPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN 372-391 454-474 PRECURSORHEP-FLURY) PVGLG_RABVP SPIKE GLYCOPROTEIN RABIES VIRUS (STRAIN PV)454-474 PRECURSOR PVGLG_RABVS SPIKE GLYCOPROTEIN RABIES VIRUS (STRAINSAD B19) 454-474 PRECURSOR PVGLG_RABVT SPIKE GLYCOPROTEIN RABIES VIRUS(STRAIN STREET) 454-474 PRECURSOR PVGLG_TRTV MAJOR SURFACE TURKEYRHINOTRACHEITIS 199-216 GLYCOPROTEIN G VIRUS PVGLG_VHSV0 SPIKEGLYCOPROTEIN VIRAL HEMORRHAGIC 406-428 PRECURSOR SEPTICEMIA VIRUS(STRAIN 07-71) PVGLH_HCMVA GLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 211-237365-382 574-598 691-712 PRECURSOR (STRAIN AD169) PVGLH_HCMVTGLYCOPROTEIN H HUMAN CYTOMEGALOVIRUS 210-236 364-381 573-597 690-711PRECURSOR (STRAIN TOWNE) PVGLH_HSV11 GLYCOPROTEIN H HERPES SIMPLEX VIRUS245-262 443-467 803-827 PRECURSOR (TYPE 1/STRAIN 17) PVGLH_HSV1EGLYCOPROTEIN H HERPES SIMPLEX VIRUS 245-262 443-467 803-827 PRECURSOR(TYPE 1/STRAIN HFEM) PVGLH_HSV6G GLYCOPROTEIN H HERPES SIMPLEX VIRUS314-332 PRECURSOR (TYPE 6/STRAIN GS) PVGLH_HSVE4 GLYCOPROTEIN H EQUINEHERPESVIRUS TYPE 4 304-325 814-839 PRECURSOR (STRAIN 1942) PVGLH_HSVEBGLYCOPROTEIN H EQUINE HERPESVIRUS TYPE 1 297-318 807-832 PRECURSOR(STRAIN AB4P) and (ISOLATE HVS25A) PVGLH_HSVSA GLYCOPROTEIN HHERPESVIRUS SAIMIRI 454-479 658-679 PRECURSOR (STRAIN 11) PVGLH_MCMVSGLYCOPROTEIN H MURINE CYTOMEGALOVIRUS 670-690 PRECURSOR (STRAIN SMITH)PVGL1_HCMVA IE GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS 158-180 PRECURSOR(STRAIN AD169) PVGLI_HSV11 GLYCOPROTEIN I HERPES SIMPLEX VIRUS 43-60(TYPE 1/STRAIN 17) PVGLI_HSVEB GLYCOPROTEIN I EQUINE HERPESVIRUS TYPE 144-63 PRECURSOR PVGLI_VZVD GLYCOPROTEIN I VARICELLA-ZOSTER VIRUS 278-297(STRAIN DUMAS) PVGLM-BUNGE M POLYPROTEIN BUNYAVIRUS GERMISTON 117-136197-222 PRECURSOR PVGLM_BUNL7 M POLYPROTEIN BUNYAVIRUS LA CROSSE 31-5581-98 190-211 1325-1345 1387-1401 PRECURSOR (ISOLATE L74) PVGLM_BUNSH MPOLYPROTEIN BUNYAVIRUS SNOWSHOE HARE 31-55 81-98 190-211 1325-13451387-1410 PRECURSOR PVGLM_BUNYW M POLYPROTEIN BUNYAMWERA VIRUS 193-2181379-1404 PRECURSOR PVGLM_DUGBV M POLYPROTEIN DUGBE VIRUS PRECURSORPVGLM_HANTB M POLYPROTEIN HANTAAN VIRUS (STAIN B-1) 355-371 692-717900-915 999-1019 PRECURSOR PVGLM_HANTH M POLYPROTEIN HANTAAN VIRUS(STRAIN HOJO) 499-515 694-718 1000-1020 PRECURSOR PVGLM_HANTL MPOLYPROTEIN HANTAAN VIRUS (STRAIN LEE) 499-515 694-719 1001-1021PRECURSOR PVGLM_HANTV M POLYPROTEIN HANTAAN VIRUS (STRAIN 76-118)499-515 694-719 1001-1021 PRECURSOR PVGLM_INSV M POLYPROTEIN IMPATIENSNECROTIC SPOT 18-44 269-293 348-367 531-551 815-841 PRECURSOR VIRUS(INSV) PVGLM_PHV M POLYPROTEIN PROSPECT HILL VIRUS 152-171 PRECURSORPVGLM_PTPV M POLYPROTEIN PUNTA TORO PHLEBOVIRUS 743-765 997-10161275-1302 PRECURSOR PVGLM_PUUMH M POLYPROTEIN PUUMALA VIRUS (STRAIN155-174 509-525 712-729 PRECURSOR HALLNAS B1) PVGLM_PUUMS M POLYPROTEINPUUMALA VIRUS (STRAIN 155-174 509-525 712-729 1092-1117 PRECURSORSOTKAMO) PVGLM_RVRF M POLYPROTEIN RIFT VALLEY FEVER VIRUS 53-80 344-368830-856 PRECURSOR PVGLM_RVFVZ M POLYPROTEIN RIFT VALLEY FEVER VIRUS53-80 344-368 830-856 1156-1176 PRECURSOR (STRAIN ZH-548-M12)PVGLM_SEOU8 M POLYPROTEIN SEOUL VIRUS (STRAIN 80-39) 355-371 692-717900-915 999-1019 PRECURSOR PVGLM_SEOUR M POLYPROTEIN SEOUL VIRUS (STRAINR22) 355-371 693-718 901-916 1000-1020 PRECURSOR PVGLM_SEOUS MPOLYPROTEIN SEOUL VIRUS (STRAIN ST-11) 355-371 692-717 900-915 999-1019PRECURSOR (SAPPORO RAT VIRUS) PVGLM_UUK M POLYPROTEIN UUKUNIEMI VIRUS561-585 655-674 826-842 925-952 966-989 PRECURSOR PVGLP_VEB PEPLOMERGLYCOPROTEIN BERNE VIRUS 430-452 869-885 1099-1124 1546-1568 PRECURSORPVGLX_HSVEB GLYCOPROTEIN X EQUINE HERPESVIRUS TYPE 1 (STRAIN AB4P)PVGLX_HSVEK GLYCOPROTEIN GX EQUINE HERPESVIRUS TYPE 1 PRECURSOR (STRAINKENTUCKY A) PVGLX_HSVEL GLYCOPROTEIN GX EQUINE HERPESVIRUS TYPE 1(STRAIN KENTUCKY A) PVGLX_PRVR1 SECRETED GLYCOPROTEIN PESUDORABIES VIRUS149-176 GX (STRAIN RICE) PVGLY_JUNIN GLYCOPROTEIN JUNIN AREANVIRUS 12-38POLYPROTEIN PRECURSOR PVGLY_LASSG GLYCOPROTEIN LASSA VIRUS (STRAIN GA39)12-35 238-259 427-449 POLYPROTEIN PRECURSOR PVGLY_LASSJ GLYCOPROTEINLASSA VIRUS (STRAIN JOSIAH) 12-35 238-259 427-449 POLYPROTEIN PRECURSORPVGLY_LYCVA GLYCOPROTEIN LYMPHOCYTIC 12-35 POLYPROTEIN PRECURSORCHORIOMENINGITIS VIRUS (STRAIN ARMSTRONG) PVGLY_LYCVW GLYCOPROTEINLYMPHOCYTIC 12-35 89-108 POLYPROTEIN PRECURSOR CHORIOMENINGITIS VIRUS(STRAIN WE) GLYCOPROTEIN MOPEIA VIRUS 12-35 425-447 POLYPROTEINPRECURSOR PVGLY_PIARV GLYCOPROTEIN PICHINDE AREANVIRUS 12-38 441-466POLYPROTEIN PRECURSOR PVGLY_TACV GLYCOPROTEIN TACARIBE VIRUS 12-38POLYPROTEIN PRECURSOR PVGLY_TACV5 GLYCOPROTEIN TACARIBE VIRUS (STRAINV5) 12-38 POLYPROTEIN PRECURSOR PVGLY_TACV7 GLYCOPROTEIN TACARIBE VIRUS(STRAIN V7) 12-38 POLYPROTEIN PRECURSOR PVGLY_TACVT GLYCOPROTEINTACARIBE VIRUS (STRAIN TRVL 12-38 POLYPROTEIN PRECURSOR 11598)PVGNB_CPMV GENOME POLYPROTEIN B COWPEA MOSAIC VIRUS 141-161 569-594757-783 1110-1135 1165-1184 PVGNM_CPMN GENOME POLYPROTEIN M COWPEAMOSAIC VIRUS 311-335 741-764 PVGP2_EBV PROBABLE MEMBRANE EPSTEIN-BARRVIRUS (STRAIN 657-681 ANTIGEN GP220 B95-8) (HUMAN HERPESVIRUS 4)PVGP3_EBV ENVELOPE EPSTEIN-BARR VIRUS (STRAIN 854-878 GLYCOPROTEIN GP340B95-8) (HUMAN HERPESVIRUS 4) PVGP8_EBV PROBABLE MEMBRANE EPSTEIN-BARRVIRUS (STRAIN 67-88 ANTIGEN GP85 B95-8) (HUMAN HERPESVIRUS 4) PVGP_EBOVSTRUCTURAL EBOLA VIRUS 34-52 537-561 653-675 GLYCOPROTEIN PRECURSORPVGP_MABVM STRUCTURAL MARBURG VIRUS (STRAIN 538-562 607-627 GLYCOPROTEINPRECURSOR MUSOKE) PVGP_MAMVP STRUCTURAL MARBURG VIRUS (STRAIN POPP)538-562 607-627 GLYCOPROTEIN PRECURSOR PVH01_VACCC PROTEIN-TYROSINEVACCINIA VIRUS (STRAIN 76-92 105-121 PHOSPHATASE COPENHAGEN) PVH01_VACCVPROTEIN-TYROSINE VACCINIA VIRUS (STRAIN WR) 76-92 105-121 PHOSPHATASEPVHO1_VARV PROTEIN-TYROSINE VARIOLA VIRUS 76-92 105-121 PHOSPHATASEPVH07_VACCV LATE PROTEIN H7 VACCINIA VIRUS (STRAIN WR) 70-97 PVH07_VARVLATE PROTEIN H7 VARIOLA VIRUS 70-97 PVHEL_FXMV PROBABLE HELICASE FOXTAILMOSAIC VIRUS 182-205 PVHEL_PMV PROBABLE HELICASE PAPAYA MOSAICPOTEXVIRUS 153-168 PV101_VACCC PROTEIN I1 VACCINIA VIRUS (STRAIN 120-135COPENHAGEN) PV101_VARB PROTEIN I1 VARIOLA VIRUS 120-135 PV103_VACCCPROTEIN I3 VACCINIA VIRUS (STRAIN 194-220 COPENHAGEN) PV103_VACCVPROTEIN I3 VACCINIA VIRUS (STRAIN WR) 104-220 PV103_VARV PROTEIN I3VARIOLA VIRUS 194-220 PV106_VACCV PROTEIN I6 VACCINIA VIRUS (STRAIN WR)106-128 133-155 PV106_VARV PROTEIN I6 VARIOLA VIRUS 106-128 133-155PV107_VACCC PROTIEN I7 VACCINIA VIRUS (STRAIN 13-34 344-367 COPENHAGEN)PV107_VACCV PROTEIN I7 VACCINIA VIRUS (STRAIN WR) 13-34 344-367PV107_VARV PROTEIN I7 VARIOLA VIRUS 13-34 344-367 PV108_VACCC PUTATIVERNA VACCINIA VIRUS (STRAIN 196-212 418-438 HELICASE 18 COPENHAGEN)PV108_VACCV PUTATIVE RNA VACCINIA VIRUS (STRAIN WR) 196-212 418-438HELICASE 18 PV108_VARV PUTATIVE RNA VARIOLA VIRUS 196-212 418-438HELICASE 18 PVIE1_HCMVA 55 KD IMMEDIATE-EARYLY HUMAN CYTOMEGALOVIRUS77-100 333-350 PROTEIN 1 (STRAIN AD169) PVIE1_HCMVT 55 KDIMMEDIATE-EARYLY HUMAN CYTOMEGALOVIRUS 77-100 333-350 PROTEIN 1 (STRAINAD169) PVIE2_HCMVA 45 KD IMMEDIATE-EARYLY HUMAN CYTOMEGALOVIRUS 14-32389-406 PROTEIN 2 (STRAIN AD169) PVIE2_HCMVT 45 KD IMMEDIATE-EARYLYHUMAN CYTOMEGALOVIRUS 14-32 388-405 PROTEIN 2 (STRAIN TOWNE) PVIE2_MCMVSIMMEDIATE-EARLY MUTINE CYTOMEGALOVIRUS 251-272 PROTEIN 2 (STAIN SMITH)PVIE3_HCMVT 30 KD IMMEDIATE-EARLY HUMAN CYTOMEGALOVIRUS 14-32 PROTEIN 2(STRAIN TOWNE) PVIEN_NPVAC IMMEDIATE-EARLY AUTOGRAPHA CALIFORNICA100-116 273-290 PROTEIN 1E-N NUCLEAR POLYHEDROSIS VIRUS PVIMP_EBV PROBINTEGRAL MEMBRANE EPSTEIN-BARR VIRUS 75-100 125-152 203-222 PROTEINBBRF3 (STRAIN B95-8) PVIMP_HCMVA PROBABLE INTEGRAL HUMAN CYTOMEGALOVIRUS68-89 190-217 MEMBRANE PROTEIN (STRAIN AD169) PVIMP_HSV11 PROBABLEINTEGRAL HERPES SIMPLEX VIRUS 83-110 250-270 MEMBRANE PROTEIN (TYPE1/STRAIN 17) PVIMP_HSVEB PROBABLE INTEGRAL EQUINE HERPESVIRUS TYPE 124-49 93-120 145-172 247-263 301-321 332-358 MEMBRANE PROTEIN (STRAINAB4P) PVIMP_HSVSA INTEGRAL MEMBRANE HERPESVIRUS SAIMIRI 76-101 313-331PROTEIN (STRAIN 11) PVIMP_VZVD PROBABLE INTEGRAL VARICELLA-ZOSTER VIRUS21-47 154-181 230-252 MEMBRANE PROTEIN (STRAIN DUMAS) PVJ01_VACCCPROTEIN J1 VACCINIA VIRUS (STRAIN 89-110 COPENHAGEN) PVJ01_VACCV PROTEINJ1 VACCINIA VIRUS (STRIAN WR) 89-110 PVJ01_VARV PROTEIN J1 VARIOLA VIRUS89-110 PVK04_VACCC PROTEIN K4 VACCINIA VIRUS (STRAIN 87-113 208-234319-337 COPENHAGEN) PVK04_VACCV PROTEIN K4 VACCINIA VIRUS (STRAIN WR)87-113 208-234 319-337 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS (STRAIN106-133 COPENHAGEN) PVL02_VACCC PROTEIN L2 VACCINIA VIRUS (STRAIN 39-61COPENHAGEN) PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN WR) 39-61PVL02_VARV PROTEIN L2 VARIOLA VIRUS 39-61 PVL03_VACCC PROTEIN L3VACCINIA VIRUS (STRAIN 148-164 186-208 292-315 COPENHAGEN) PVL03_VACCVPROTEIN L3 VACCINIA VIRUS (STRAIN WR) 148-164 186-208 292-315 PVL03_VARVPROTEIN L3 VARIOLA VIRUS 147-163 / 185-207 291-314 PVL05_VACCV PROTEINL5 VACCINIA VIRUS (STRAIN WR), 16-39 AND (STRAIN COPENHAGEN) PVL05_VARVPROTEIN L5 VARIOLA VIRUS 16-39 PVL1_CRPVK PROBABLE L1 PROTEIN COTTONTAILRABBIT (SHOPE) 299-317 PAPILLOMAVIRUS (STRAIN KANSAS) PVL1_HPV18PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS 28-55 TYPE 18 PVL1_HPV41PROBABLE L1 PROTEIN HUMAM PAPILLOMAVIRUS 38-63 TYPE 41 PVL1_REOVD MAJORCORE PROTEIN REOVIRUS (TYPE 3/STRAIN 327-346 351-366 752-774 LAMBDA 1DEARING) PVL2_HPV08 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 254-270TYPE 8 PVL2_HPV11 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 32-58 TYPE 11PVL2_HPV13 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 13PVL2_HPV16 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 TYPE 16PVL2_HPV18 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 18PVL2_HPV1A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 213-228 TYPE 1APVL2_HSV2A PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 88-114 TYPE 2APVL2_HPV31 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 443-462 TYPE31 PVL2_HPV33 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 99-114 TYPE33 PVL2_HPV35 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 34-60 TYPE 35PVL2_HPV41 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 39-58 414-436 TYPE41 PVL2_HPV42 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 344-370TYPE 42 PVL2_HPV47 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 250-265 TYPE47 PVL2_HPV57 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 32-58 TYPE 57PVL2_HPV58 PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 99-114 TYPE 58PVL2_HPV6B PROBABLE L2 PROTEIN HUMAN PAPILLOMAVIRUS 33-59 TYPE 6BPVL2_PAPVE PROBABLE L2 PROTEIN EUROPEAN ELK 30-56 PAPILLOMAVIRUSPVL2_RHPV1 PROBABLE L2 PROTEIN RHESUS PAPILLOMAVIRUS 45-71 TYPE 1PVL3_HPV5B PROBABLE L3 PROTEIN HUMAN PAPILLOMAVIRUS 6-28 TYPE 5BPVL3_REOVD MINOR CORE PROTEIN REOVIRUS (TYPE 3/STRAIN 714-737 LAMBDA 3DEARING PVL3_REOVJ MINOR CORE PROTEIN REOVIRUS (TYPE 2/STRAIN 714-7371213-1236 LAMBDA 3 D5/JONES) PVL3_REOVL MINOR CORE PROTEIN REOVIRUS(TYPE 1/STRAIN LANG) 714-737 LAMBDA 3 PVL96_IRV1 L96 PROTEIN TIPULAIRIDESCENT VIRUS (TIV) 144-170 196-220 686-711 845-861 (INSECTIRIDESCENT VIRUS TYPE 1) PVM01_VACCC PROTEIN M1 VACCINIA VIRUS (STRAIN134-159 177-195 281-302 COPENHAGEN) PVM01_VACCV PROTEIN M1 VACCINIAVIRUS (STRAIN WR) 83-108 126-144 230-251 PVM01_VARV PROTEIN M1 VARIOLAVIRUS 81-106 124-142 228-249 PVM1_REOVD MINOR VIRION STRUCTURAL REOVIRUS(TYPE 3/STRAIN 141-168 227-245 280-304 324-347 414-436 454-477 PROTEINMU-2 DEARING) PVM1_REOVL MINOR VIRION STRUCTURAL REOVIRUS (TYPE 1/STRAINLANG) 141-168 227-245 280-304 414-436 454-477 PROTEIN MU-2 PVM21_REOVDMAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN 168-192 PROTEINMU-1/MU-1C DEARING) PVM22_REOVD MAJOR VIRION STRUCTURAL REOVIRUS (TYPE3/STRAIN 168-192 PROTEIN MU-1/MU-1C DEARING) PVM2_REOVJ MAJOR VIRIONSTRUCTURAL REOVIRUS (TYPE 3/STRAIN 168-192 PROTEIN MU-1/MU-1C D5/JONES)PVM2_REOVL MAJOR VIRION STRUCTURAL REOVIRUS (TYPE 3/STRAIN 168-192PROTEIN MU-1/MU-1C LANG) PVM3_REOVD MAJOR NONSTRUCTURAL REOVIRUS (TYPE3/STRAIN 304-326 521-540 PROTEIN MU-NS DEARING) PVMAT_BRSVA MATRIXPROTEIN BOVINE RESPIRATORY 37-62 SUNCYTIAL VIRUS (STRAIN A51908)PVMAT_CDVO MATRIX PROTEIN CANINE DISTEMPER VIRUS 148-165 283-309 (STRAINCOPENHAGEN) PVMAT_HRSVA MATRIX PROTEIN HUMAN RESPIRATORY 44-62 139-160SYNCYTIAL VIRUS (STRAIN A2) PVMAT_LPMV MATRIX PROTEIN LAPIEDAD-MICHOACAN-MEXICO 311-338 VIRUS PVMAT_MEASE MATRIX PROTEIN MEASLESVIRUS (STRAIN 283-309 EDMONSTON) PVMAT_MEASH MATRIX PROTEIN MEASLESVIRUS (STRAIN 283-309 HALLE) PVMAT_MEASI MATRIX PROTEIN MEASLES VIRUS(STRAIN 87-111 IP-3-CA) PVMAT_MEASU MATRIX PROTEIN MEASLES VIRUS (STRAINHU2) 283-309 PVMAT_MUMP1 MATRIX PROTEIN MUMPS VIRUS (STRAIN SBL-1)191-207 227-250 310-330 PVMAT_MUMPS MATRIX PROTEIN MUMPS VIRUS (STRAINSBL) 191-207 227-250 310-330 PVMAT_NDVA MATRIX PROTEIN NEWCASTLEDIESEASE VIRUS 135-151 190-208 309-329 (STRAIN AUSTRAULIA- VICTORIA/32)PVMAT_NDVB MATRIX PROTEIN NEWCASTLE DIESEASE VIRUS 135-151 190-208309-329 (STRAIN BEAUDETTE C/45) PVMAT_PIIHC MATRIX PROTEIN HUMANPARAINFLUENZA 1 VIRUS 195-217 (STRAIN C39) PVMAT_P12HT MATRIX PROTEINHUMAN PARAINFLUENZA 2 VIRUS 132-154 189-205 308-328 (STRAIN TOSHIBA)(PIV-2) PVMAT_P14HA MATRIX PROTEIN HUMAN PARAINFLUENZA 4A 312-332 VIRUS(STRAIN TOSHIBA) (PIV-4A) PVMAT_P14HB MATRIX PROTEIN HUMAN PARAINFLUENZA4B 312-332 VIRUS (STRAIN 68-333) (PIV-4B) PVMAT_RINDK MATRIX PROTEINRINDERPEST VIRUS (STRAIN 200-221 239-260 283-309 KABETE O) PVMAT_SENDFMATRIX PROTEIN SENDAI VIRUS (STRAIN FUSHIMI) 195-217 PVMAT_SENDH MATRIXPROTEIN SENDAI VIRUS (STRAIN HARRIS) 195-217 PVMAT_SENDZ MATRIX PROTEINSENDAI VIRUS (STRAIN Z) 195-217 PVMAT_SSPVB MATRIX PROTEIN SUBACUTESCLEROSING 283-309 314-338 PANENCEPHALITIS VIRUS (STRAIN BIKEN)PVMAT_SV41 MATRIX PROTEIN SIMINA VIRUS 41 132-154 189-205 308-328PVMAT_SV5 MATRIX PROTEIN SIMIAN VIRUS 5 (STRIAN W3) 98-114 132-148308-335 PVMAT_SVCV MATRIX PROTEIN SPRING VIREMIA OF CARP VIRUS 141-167(RHABDOVIRUS CARPIA) PVMAT_TRTV MATRIX PROTEIN TURKEY RHINOTRACHEITIS122-143 VIRUS PVME1_CVBM E1 GLYCOPROTEIN BOVINE CORONAVIRUS 9-36 137-161171-190 (STRAIN MEBUS) PVME1_CVH22 E1 GLYCOPROTEIN HUMAN CORONAVIRUS136-155 (STRAIN 229E) PVME1_CVHOC E1 GLYCOPROTEIN HUMAN CORONAVIRUS 9-3664-85 137-161 (STRAIN OC43) PVME1_CVMA5 E1 GLYCOPROTEIN MURINECOROANVIRUS MHV 10-37 (STRAIN A59) PVEM1-CVMJH E1 GLYCOPROTEIN MURINECOROANVIRUS MHV 10-37 (STRAIN JHM) PVME1_CVPFS E1 GLYCOPROTEIN PORCINETRANSMISSIBLE 174-193 PRECURSOR GASTROENTERITIS CORONA- VIRUS (STRAINPVME1_CVPPU E1 GLYCOPROTEIN PORCINE TRANSMISSIBLE 169-193 174-193PRECURSOR GASTROENTERITIS CORONA- VIRUS (STRAIN PVME1_CVPRM E1GLYCOPROTEIN PORCINE RESPIRATORY 174-193 PRECURSOR CORONAVIRUS (STRAINRM4) PVME1_CVTKE E1 GLYCOPROTEIN TURKEY ENTERIC CORONAVIRUS 9-36 137-161171-190 PVME1_IBV6 E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-98VIRUS (STRAIN 6/82) PVME1_IBVB E1 GLYCOPROTEIN AVIAN INFECTIOUSBRONCHITIS 74-101 VIRUS (STRAIN BEAUDETTE) PVME1_IBVB2 E1 GLYCOPROTEINAVIAN INFECTIOUS BRONCHITIS 74-101 VIRUS (STRAIN BEAUDETTE M42)PVME1_IBVK E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS 74-98 VIRUS(STRAIN KB8523) PVMEM_EBV PROBABLE MEMBRANE EPSTEIN-BARR VIRUS 131-157178-203 PROTEIN (STRAIN B95-8) PVMP_CAMVC MOVEMENT PROTEIN CAULIFLOWERMOSAIC VIRUS 118-134 147-164 183-201 (STRAIN CM-1841) PVMP_CAMVDMOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201(STRAIN D/H) PVMP_CAMVE MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS118-134 147-164 183-201 (STRAIN BBC) PVMP_CAMVN MOVEMENT PROTEINCAULIFLOWER MOSAIC VIRUS 118-134 147-164 183-201 (STRAIN NY8153)PVMP_CAMV5 MOVEMENT PROTEIN CAULIFLOWER MOSAIC VIRUS 118-134 147-164183-201 (STRAIN STRASBOURG) PVMP_CAMVW MOVEMENT PROTEIN CAULIFLOWERMOSAIC VIRUS 118-134 147-164 183-201 STRAIN W260) PVMP_CERV MOVEMENTPROTEIN CARNATION ETCHED RING VIRUS 293-318 PVMP_FMVD MOVEMENT PROTEINFIGWORT MOSAIC VIRUS 115-131 180-198 (STRAIN DXS) PVMP_SOCMV MOVEMENTPROTEIN SOYBEAN CHLOROTIC MOTTLE 122-147 273-299 VIRUS PVMSA_HPBDB MAJORSURFACE ANTIGEN DUCK HEPATITIS B VIRUS 201-228 269-295 PRECURSOR (BROWNSHANGHAI DUCK ISOLATE S5) PVMSA_HPBDC MAJOR SURFACE ANTIGEN DUCKHEPATITIS B VIRUS 194-221 268-294 PRECURSOR (STRAIN CHINA) PVMSA_HPBDUMAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 157-184 231-257 PRECURSORPVMSA_HPBDW MAJOR SURFACE ANTIGEN DUCK HEPATITIS B VIRUS 194-221 269-295PRECURSOR (WHITE SHANGHAI DUCK ISOLATE S31) PVMSA_HPBGS MAJOR SURFACEANTIGEN GROUND SQUIRREL HEPATITIS 209-236 271-295 380-395 PRECURSORVIRUS PVMSA_HPBHE MAJOR SURFACE ANTIGEN HERON HEPATITIS B VIRUS 236-262293-320 PRECURSOR PVMSA_HPBV0 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS11-28 70-96 PVMSA_HPBV2 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202244-270 PRECURSOR PVMSA_HPBV9 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS244-270 PRECURSOR (SUBTYPE ADW/STRAIN 991) PVMSA_HPBVA MAJOR SURFACEANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (STRAIN ALPHA)PVMSA_HPBVD MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 (SUBTYPEAD) PVMSA_HPBV1 MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 233-259PRECURSOR (SUBTYPE ADW/STRAIN INDONESIA/PIDW420) PVMSA_HPBVJ MAJORSURFACE ANTIGEN HEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPEADW/STRAIN JAPAN/PJDW233) PVMSA_HPBVL MAJOR SURFACE ANTIGEN HEPATITIS BVIRUS 174-191 233-259 PRECURSOR (STRAIN LSH/CHIMPANZEE ISOLATEPVMSA_HPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96 (SUBTYPEADR/STRAIN NC-1) PVMSA_HPBVO MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS174-191 233-259 PRECURSOR (SUBTYPE ADW/STRAIN IKINAWA PODW282)PVMSA_HPBVP MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270PRECURSOR (SUBTYPE ADW/STRAIN PHILIPPINO/PFD2294) PVMSA_HPBVR MAJORSURFACE ANTIGEN HEPATITIS B VIRUS 185-202 244-270 PRECURSOR (SUBTYPEADR) PVMSA_HPBVS MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 11-28 70-96(SUBTYPE AR) PVMSA_HPBVW MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS 174-191233-259 PRECURSOR (SUBTYPE ADW) PVMSA_HPBVY MAJOR SURFACE ANTIGENHEPATITIS B VIRUS 174-191 233-259 PRECURSOR (SUBTYPE ADW) PVMSA_WHV1MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 1 207-234 269-293378-393 PRECURSOR PVMSA_WHV59 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS212-239 274-298 383-398 PRECURSOR VIRUS 59 PVMSA_WHV7 MAJOR SURFACEANTIGEN WOODCHUCK HEPATITIS VIRUS 7 212-239 274-398 383-398 PRECURSORPVMSA_WHV8 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 212-239274-298 383-398 PRECURSOR PVMSA_WHV81 PROB MAJOR SURFACE WOODCHUCKHEPATITIS VIRUS 8 212-239 274-298 383-398 ANTIGEN PREC (INFECTIOUSCLONE) PVMSA_WHVW6 MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS125-149 234-249 PRECURSOR W64 (ISOLATE PWS23) PVMT2_IAANN MATRIX (M2)PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/ANN ARBOR/6/60) PVMT2_IABANMATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/BANGKOK/1/79)PVMT2_IAFOW MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/FORTWARREN/1/50) PVMT2_IAFPR MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46(STRAIN A/FOWL PLAGUE VIRUS/ ROSTOCK/34) PVMT2_IAFPW MATRIX (M2) PROTEININFLUENZA A VIRUS 25-46 (STRAIN A/FOWL PLAGUE VIRUS/ WEYBRIDE)PVMT2_IALE1 MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAINA/LENINGRAD/134/57) PVMT2_IALE2 MATRIX (M2) PROTEIN INFLUENZA A VIRUS25-46 (STRAIN A/LENINGRAD/134/17/57) PVMT2_IAMAN MATRIX (M2) PROTEININFLUENZA A VIRUS 25-46 (STRAIN A/MALLARD/NEW YORK/6750/78) PVMT2_IAPUEMATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAIN A/PUERTO RICO/8/34)PVMT2_IASIN MATRIX (M2) PROTEIN INFLUENZA A VIRUS 25-46 (STRAINA/SINGAPORE/1/57) PVMT2_IAUDO MATRIX (M2) PROTEIN INFLUENZA A VIRUS25-46 (STRAIN A/UDORN/307/72) PVMT2_IAWIL MATRIX (M2) PROTEIN INFLUENZAA VIRUS 25-46 (STRAIN A/WILSON-SMITH/33) PVMT9_MYXVL MT-9 PROTEIN MYXOMAVIRUS (STRAIN 226-241 LAUSANNE) PVN34_ROTBS NONSTRUCTURAL BOVINEROTAVIRUS (GROUP C/ 334-351 PROTEIN NS34 STRAIN SHINTOKU) PVNBP_PVSP 107 KD PROTEIN POTATO VIRUS (STRIAN 21-36 PERUVIAN) PVNB_INBBE NBGLYCOPROTEIN INFLUENZA B VIRUS 13-39 (STRAIN B/BEIJING/1/87) PVNB_INBHKNB GLYCOPROTEIN INFLUENZA B VIRUS 13-39 (STRAIN B/HONK KONG/8/73)PVNS1_IAMAN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1(STRAIN A/MALLARD/NEW YORK/6750/78) PVNS1_IAMAO NONSTRUCTURAL PROTEININFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/MALLARD/NEW YORK/6874/78)PNVS1_IAMUN NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 28-47 164-189 NS1(STRAIN A/MYNAH/HANEDA- THAI/76) PVNS1_IAP10 NONSTRUCTURAL PROTEININFLUENZA A VIRUS 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 119/79)PVNS1_IAPI1 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1(STRAIN A/PINTAIL/ALBERTA/ 121/79) PVNS1_IAPI2 NONSTRUCTURAL PROTEININFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/PINTAIL/ALBERTA/ 268/78)PVNS1_IAPI3 NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1(STRAIN A/PINTAIL/ALBERTA/ 358/79) PVNS1_IAPUE NONSTRUCTURAL PROTEININFLUENZA A VIRUS 31-50 114-137 167-192 NS1 (STRAIN A/PUERTO RICO/8/34)PVNS1_IATKB NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1(STRAIN A/TURKEY/BETHLEHEM- GLILIT/1492-B PVNS1_IATKC NONSTRUCTURALPROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAIN A/TURKEY/CANADA/63)PVNS1_IATKR NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 NS1 (STRAINA/TURKEY/OREGON/71) PVNS1_IATRS NONSTRUCTURAL PROTEIN INFLUENZA A VIRUS28-47 164-189 NS1 (STRAIN A/TERN/SOUTH AFRICA/61) PVNS1_IATRTNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 167-192 NS1 (STRAINA/TERN/TURKMENIA/ 18/72) PVNS1_IAUDO NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS 31-50 114-137 167-192 NS1 (STRAIN A/UDORN/307/72) PVNS1_IAUSSNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 31-50 114-137 167-192 NS1(STRAIN A/USSR/90/77) PVNS1_IAZI1 NONSTRUCTURAL PROTEIN INFLUENZA AVIRUS 31-50 167-192 NS1 (STRAIN A/SWINE/IOWA/15/30) PVNS1_INCAANONSTRUCTURAL PROTEIN INFLUENZA C VIRUS 222-248 NS1 PVNS1_INCCANONSTRUCTURAL PROTEIN INFLUENZA C VIRUS 222-248 NS1 PVNS2_BTV10NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 201-223 NS210/ISOLATE USA) PVNS2_BTV17 NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS(SEROTYPE 145-161 201-223 NS2 17/ISOLATE USA) PVNS2_BTV1S NONSTRUCTURALPROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 NS2 1/ISOLATE SOUTH AFRICA)PVNS2_BTV1X NONSTRUCTURAL PROTEIN BLUETONGUE VIRUS (SEROTYPE 145-161 NS210) PVNS2_EHDV2 NONSTRUCTURAL PROTEIN EPIZOOTIC HEMORRHAGIC 145-161 NS2DISEASE VIRUS (SEROTYPE 2/ STRAIN AL PVNS2_IAPUE NONSTRUCTURAL PROTEININFLUENZA A VIRUS 3-28 NS2 (STRAIN A/PUERTO RICO/8/34) PVNS2_IATRSNONSTRUCTURAL PROTEIN INFLUENZA A VIRUS 56-80 NS2 (STRAIN A/TERN/SOUTHAFRICA/61) PVNS2_PVM NONSTRUCTURAL PROTEIN 2 PNEUMONIA VIRUS OF MICE52-68 PVNS3_CVPFS NONSTRUCTURAL PROTEIN PORCINE TRANSMISSIBLE 177-2013-1 GASTROENTERITIS CORONA- VIRUS (STRAIN PVNS3_CVPPU NONSTRUCTURALPROTEIN PORCINE TRANSMISSIBLE 98-122 3-1 GASTROENTERITIS CORONAVIRUS(STRAIN PVNS3_CVPRM NONSTRUCTURAL PROTEIN PORCINE RESPIRATORY 177-2013-1 CORONAVIRUS (STRAIN RM4) PVNS3_RSV NONSTRUCTURAL PROTEIN RICE STRIPEVIRUS 16-40 NS3 PVNS4_CVH22 NONSTRUCTURAL PROTEIN 4 HUMAN CORONAVIRUS84-100 (STRAIN 229E) PVNS4_CVMS NONSTRUCTURAL PROTEIN 4 MURINECORONAVIRUS MHV 17-38 (STRAIN S) PVNS4_CVPFS NONSTRUCTURAL PROTEIN 4PORCINE TRANSMISSIBLE 4-31 GASTROENTERITIS CORNOA- VIRUS (STRAINPVNS4_CVPPU NONSTRUCTURAL PROTEIN 4 PROCINE TRANSMISSIBLE 4-31GASTROENTERITIS CORNOA- VIRUS (STRAIN PVNS4_CVPRM NONSTRUCTURAL PROTEIN4 PORCINE REPSIRATORY 4-31 CORONAVIRUS (STRAIN RM4) PVNS4_MSTVNONSTRUCTURAL PROTEIN MAIZE STRIPE VIRUS 41-56 NS4 PVNS4_RSVNONSTRUCTURAL PROTEIN RICE STRIPE VIRUS 41-56 60-82 152-167 NS4PVNS7_CVFE3 NONSTRUCTURAL PROTEIN 7 FELINE ENTERIC CORONAVIRUS 59-84(STRAIN 79-1683) PVNS7_FIPV NONSTRUCTURAL PROTEIN 7 FELINE INFECTIOUSPERITONITIS 59-84 VIRUS (STRAIN 79-1146) PVNSC_PI1HB NONSTRUCTURALPROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 (STRAIN C35) PVNSC_PI1HCNONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92 (STRAIN C39)PVNSC_PI1HD NONSTRUCTURAL PROTEIN C HUMAN PARAINFLUENZA 1 VIRUS 76-92179-197 (STRAIN CI-5/73) PVNSC_PI1HE NONSTRUCTURAL PROTEIN C HUMANPARAINFLUENZA 1 VIRUS 76-92 (STRAIN CI-14/83) PVNUC_IABUD NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/BUDGERIGAR/HOKKAIDO/1/77)PVNUC_IACAL NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/CALIFORNIA/10/78) PVNUC_IACKG NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173-197 A/CHICKEN/GERMANY/N/49) PVNUC_IACKP NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173-197 A/CHICKEN/PENNSYLVANIA/1/83) PVNUC_IADAUNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/AUSTRALIA/749/80PVNUC_IADBE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/DUCK/BEIJING/1/78) PVNUC_IADCZ NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173-197 A/DUCK/CZECHOSLOVAKIA/56) PVNUC_IADE1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173-197 A/DUCK/ENGLAND/1/56) PVNUC_IADE2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/ENGLAND/1/62) PVNUC_IADHKNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/HONG KONG/7/75)PVNUC_IADM2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/DUCK/MEMPHIS/928/74) PVNUC_IADMA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/DUCK/MANITOBA/1/53) PVNUC_IADNZ NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/NEW ZEALAND/31/76) PVNUC_IADU2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/DUCK/UKRAINE/2/60)PVNUC_IAEN5 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/ENGLAND/19/55) PVNUC_IAFOW NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173-197 A/FORT WARREN/1/50) PVNUC_IAFPD NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/FOWL PLAGUE VIRUS/ DOBSON/DUTC PVNUC_IAFPRNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/FOWL PLAGUE VIRUS/ROSTOCK/34) PVNUC_IAGRE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/GREY TEAL/AUSTRALIA/2/79) PVNUC_IAGU1 NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/GULL/MARYLAND/5/77) PVNUC_IAGU2 NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/704/77) PVNUC_IAGU3NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MARYLAND/1824/78)PVNUC_IAGU4 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/GULL/MARYLAND/1815/79) PVNUC_IAGUA NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/GULL/ASTRAKHAN/227/84) PVNUC_IAGUM NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/GULL/MASSACHUSETTS/26/80)PVNUC_IAGUN NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/GULL/MINNESOTA/945/80) PVNUC_IAHIC NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/HICKOX/40) PVNUC_IAHJI NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/EQUINE/JILLIN/1/89) PVNUC_IAHLO NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/LONDON/1416/73) PVNUC_IAHMINUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/EQUINE/MIAMI/1/63)PVNUC_IAHOI NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/HONGKONG/1/68) PVNUC_IAHO2 NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/HONG KONG/5/83) PVNUC_IAHPR NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173-197 A/EQUINE/PRAGUE/1/56) PVNUC_IAHTE NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173-197 A/EQUINE/TENNESSEE/5/86) PVNUC_IAKIE NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/KEIV/59/79) PVNUC_IALENNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/LENINGRAD/54/1)PVNUC_IAMAA NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/MALLARD/ASTRAKHAN/244/82) PVNUC_IAMAN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/MALLARD/NEW YORK/6750/78) PVNUC_IAMIN NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/MINK/SWEDEN/84) PVNUC_IANT6NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/NT/60/68) PVNUC_IAOHINUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/OHIO/4/83) PVNUC_IAPARNUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/PARROT/ULSTER/73)PVNUC_IAPUE NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/PUERTORICO/8/34) PVNUC_IARUD NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/RUDDY TURNSTONE/NEW JERSEY/47/ PVNUC_IASE0 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173-197 A/SEAL/MASSCHUSETTES/1/80) PVNUC_IASH2NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/SHEARWATER/AUSTRALIA/72) PVNUC_IASIN NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/SINGAPORE/1/57) PVNUC_IATE1 NUCLEOPROTEIN INFLUENZA AVIRUS (STRAIN 173-197 A/TEAL/ICELAND/29/80) PVNCU_IATKN NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/TURKEY/MINNESOTA/1661/81)PVNUC_IATKO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/TURKEY/ONTARIO/7732/66) PVNUC_IATRS NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/TERN/SOUTH AFRICA/61) PVNUC_IATRT NUCLEOPROTEININFLUENZA A VIRUS (STRAIN 173-197 A/TERN/TURKEYMENAI/18/72) PVNUC_IATX7NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197 A/TEXAS/1/77)PVNUC_IAUDO NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN 173-197A/UDORN/307/72) PVNUC_IAUSS NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN173-197 A/USSR/90/77) PVNUC_IAVIS NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN 173-197 A/VICTORIA/5/68) PVP23_VZVD PROBABLE CAPSID PROTEINVARICELLA-ZOSTER VIRUS 117-132 VP23 (STRAIN DUMAS) PVP26_NPVAC P26PROTEIN AUTOGRAPHA CALIFORNICA 12-31 58-76 117-141 NUCLEAR POLYHEDROSISVIRUS PVP2_AHSV4 OUTER CAPSID PROTIEN AFRICAN HORSE SICKNESS VIRUS868-891 974-994 VP2 (SEROTYPE 4/STRAIN VACCINE) PVP2_BTV10 OUTER CAPSIDPROTEIN BLUETONGUE VIRUS (SEROTYPE 361-381 399-424 564-586 829-849 VP210/ISOLATE USA PVP2_BTV11 OUTER CAPSID PROTEIN BLUETONGUE VIRUS(SEROTYPE 361-381 399-424 829-849 VP2 11/ISOLATE USA) PVP2_BTV13 OUTERCAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 362-382 420-438 617-642657-676 VP2 13/ISOLATE USA) PVP2_BTV17 OUTER CAPSID PROTEIN BLUETONGUEVIRUS (SEROTYPE 361-381 VP2 17/ISOLATE USA) PVP2_BTV1A OUTER CAPSIDPROTEIN BLUETONGUE VIRUS (SEROTYPE 420-438 654-681 VP2 1/ISOLATEAUSTRALIA PVP2_BTV1S OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE14-31 117-140 420-438 654-681 VP2 1/ISOLATE SOUTH AFRICA) PVP2_EHDV1OUTER CAPSID PROTEIN EPIZOOTIC HEMORRHAGIC 153-168 229-252 VP2 DISEASEVIRUS (SEROTYPE 1) PVP2_ROTBR RNA-BINDING PROTEIN BOVINE ROTAVIRUS(STRAIN RF) 301-317 334-360 522-543 673-699 764-789 VP2 PVP2_ROTBURNA-BINDING PROTEIN BOVINE ROTAVIRUS (STRAIN UK) 301-317 334-360 523-544765-790 VP2 PVP2_ROTHW RNA-BINDING PROTEIN HUMAN ROTAVIRUS (SEROTYPE309-325 432-363 532-553 674-700 774-799 VP2 1/STRAIN WA) PVP2_ROTPCRNA-BINDING PROTEIN PORCINE ROTAVIRUS (GROUP C/ 51-75 303-319 408-425514-535 665-691 VP2 STRAIN COWDEN) PVP2_ROTS1 RNA-BINDING PROTEIN SIMIAN11 ROTAVIRUS 34-57 219-240 302-318 335-360 523-544 674-700 765-790 VP2(STRAIN SA11) PVP30_MABVP MINOR NUCLEOPROTEIN MARBURG VIRUS (STRAIN50-75 VP30 MUSOKE) PVP32_ASFB7 PHOSPHOPROTEIN P32 AFRICAN SWINE FEVERVIRUS 174-197 (STRAIN BA71V) PVP35_EBOV POLYMERASE COMPLEX EBOLA VIRUS233-256 PROTEIN VP35 PVP35_MAMVM POLYMERASE COMPLEX MARBURG VIRUS(STRAIN 49-75 78-104 PROTEIN VP35 MUSOKE) PVP35_MABVP POLYMERASE COMPLEXMARBURG VIRUS (STRAIN 49-75 78-104 VP35 POPP) PVP35_VACCC IMMUNODOMINANTVACCINIA VIRUS (STRAIN 278-304 ENVELOPE PROTEIN P35 COPENHAGEN)PVP35_VACCV IMMUNODOMINANT VACCINIA VIRUS (STRAIN WR) 278-304 ENVELOPEPROTEIN P35 PVP35_VARV IMMUNODOMINANT VARIOLA VIRUS 279-305 ENVELOPEPROTEIN P35 PVP38_HSVMG 38 KD PHOSPHOPROTEIN MAREK'S DISEASE HERPESVIRUS255-270 (STRAIN GA) PVP38_HSVMN 38 KD PHOSPHOPROTEIN MAREK'S DISEASEHERPESVIRUS 255-270 (STRAIN MD11/75C/R2) PVP39_NPVAC MAJOR CAPSIDPROTEIN AUTOGRAPHA CALIFORNICA 296-311 NUCLEAR POLYHEDROSIS VIRUSPVP39_NPVOP MAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA 107-134 214-240295-316 MULTICAPSID POLYHEDROSIS VIRUS PVP3_ASHV4 VP3 CORE PROTEINAFRICAN HORSE SICKNESS VIRUS 65-85 126-147 215-230 845-862 (SEROTYPE4/STRAIN VACCINE) PVP3_BTV10 VP3 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE123-144 212-227 10/ISOLATE USA) PVP3_BTV17 VP3 CORE PROTEIN BLUETONGUEVIRUS (SEROTYPE 123-144 212-227 17/ISOLATTE USA) PVP3_BTV14 VP3 COREPROTEIN BLUETONGUE VIRUS (SEROTYPE 123-144 212-227 1/ISOLATE AUSTRALIA)PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC 121-142 671-695DISEASE VIRUS (SEROTYPE 1) PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTICHEMORRHAGIC 121-142 671-695 DISEASE VIRUS (SEROTYPE 2/STRAIN AUSPVP3_EDV MAJOR 114 KD STRUCTURAL RICE DWARF VIRUS (RDV) 89-108 340-360367-393 690-717 742-768 748-768 960-975 PROTEIN PVP3_ROTPC INNER COREPROTEIN PORCINE ROTAVIRUS (GROUP C/ 405-429 VP3 STRAIN COWDEN)PVP3_ROTS1 INNER CORE PROTEIN SIMIAN 11 ROTATVIRUS 401-425 426-444512-536 796-822 VP3 (STRAIN SA11) PVP40_EBV CAPSID PROTEIN P40EPSTEIN-BARR VIRUS 429-454 (STRAIN B95-8) PVP40_HSV11 CAPSID PROTEIN P40HERPES SIMPLEX VIRUS 141-168 472-492 (TYPE 1/STRAIN 17) PVP40_HSVEBCAPSID PROTEIN P40 EQUINE HERPESVIRUS TYPE 1 50-67 95-119 483-504(STRAIN AB4P) PVP40_HSVSA CAPSID PROTEIN P40 HERPESVIRUS SAIMIRI 342-368(STRAIN 11) PVP40_ILTVT CAPSID PROTEIN P40 INFECTIOUS LARYNGOTRACHEI-506-528 TIS VIRUS (STRAIN THRONE V882) PVP40_MAMVM MATRIX PROTEIN VP40MARBURG VIRUS (STRAIN 95-110 MUSOKE) PVP40_MABVP MATRIX PROTEIN VP40MARBURB VIRUS (STRAIN 95-110 VP40 POPP) PVP40_NPVBM STRUCTURAL BOMBYXMORI NUCLEAR 223-242 256-272 GLYCOPROTEIN P40 POLYHEDROSIS VIRUSPVP40_VZVD CAPSID PROTEIN VP24 VARICELLA-ZOSTER VIRUS 47-64 (STRAINDUMAS) PVP41_NPVAC STRUCTURAL AUTOGRAPHA CALIFORNICA 229-248 262-278GLYCOPROTEIN GP41 NUCLEAR POLYHEDROSIS VIRUS PVP41_ROTS1 OUTER CAPSIDPROTEIN SIMIAN 11 ROTAVIRUS 483-508 VP4 (STRAIN SA11) PVP42_ROTS1 OUTERCAPSID PROTEIN SIMIAN 11 ROTAVIRUS 395-411 483-508 VP4 (STRAIN SA11)PVP47_NPVAC VIRAL TRANSCRIPTION AUTOGRAPHA CALIFORNICA 14-38 REGULATORP47 NUCLEAR POLYHEDROSIS VIRUS PVP48_NPVOP P48 PROTEIN ORGYIAPSEUDOSUGATA 136-157 MULTICAPSID POLYHEDROSIS VIRUS PVP4A_VARV MAJORCORE PROTEIN VARIOLA VIRUS 273-288 PRA PRECURSOR PVP4B_VACCC MAJOR COREPROTEIN VACCINIA VIRUS (STRAIN 331-358 PRA PRECURSOR COPENHAGEN)PVP4B_VACCV MAJOR CORE PROTEIN VACCINIA VIRUS (STRAIN WR) 331-358 PRAPRECURSOR PVP4B_VARV MAJOR CORE PROTEIN VARIOLA VIRUS 331-358 PRAPRECURSOR PVP4_BTV10 VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-191233-249 545-561 10/ISOLATE USA) PVP4_BTV11 VP4 CORE PROTEIN BLUETONGUEVIRUS (SEROTYPE 174-191 233-249 535-551 11/ISOLATE USA) PVP4_BTV13 VP4CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE 174-191 233-249 535-55113/ISOLATE USA) PVP4_BTV2A VP4 CORE PROTEIN BLUETONGUE VIRUS (SEROTYPE174-193 233-249 535-551 2/ISOLATE USA) PVP4_NCDV OUTER CAPSID PROTEINNEBRASKA CALF DIARRHEA 483-508 VP4 VIRUS (STRAIN NCDV-LINCOLN) PVP4_RDVNONSTRUCTURAL PROTEIN RICE DWARF VIRUS 386-407 493-514 626-645 PNS4PVP4_ROTB4 OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (SEROTYPE 483-508 VP46/STRAIN B64) PVP4_ROTBC OUTER CAPSID PROTEIN BOVINE ROTAVIRUS (STRAIN483-508 VP4 C486) PVP4_ROTBU OUTER CAPSID PROTEIN BOVINE ROTAVIRUS(STRAIN UK) 483-508 VP4 PVP4_ROTEH OUTER CAPSID PROTEIN EQUINE ROTAVIRUS(STRAIN 226-250 483-508 VP4 H-2) PVP4_ROTH1 OUTER CAPSID PROTEIN HUMANROTAVIRUS (SEROTYPE/ 181-207 234-249 482-507 VP4 1/STRAIN 1076)PVP4_ROTH5 OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE/ 181-207234-249 482-507 VP4 2/STRAIN RV-5) PVP4_ROTH6 OUTER CAPSID PROTEIN HUMANROTAVIRUS (SEROTYPE 483-508 VP4 1/STRAIN 69M) PVP4_ROTHD OUTER CAPSIDPROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 2/STRAINDS1) PVP4_ROTHJ OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (STRAIN K8) 483-508524-548 VP4 PVP4_ROTHK OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (STRAIN KU)76-91 181-207 234-249 482-507 VP4 PVP4_ROTHL OUTER CAPSID PROTEIN HUMANROTAVIRUS (STRAIN L26) 181-207 234-249 482-507 VP4 PVP4_ROTHM OUTERCAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP41/STRAIN M37) PVP4_ROTHN OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE/181-208 235-250 483-508 VP4 3/STRAIN MCN13) PVP4_ROTHP OUTER CAPSIDPROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 234-249 482-507 VP4 3/STRAINP) PVP4_ROTHT OUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207234-249 482-507 VP4 4/STRAIN ST THOMAS) PVP4_ROTHV OUTER CAPSID PROTEINHUMAN ROTAVIRUS (SEROTYPE 181-207 482-507 VP4 4/STRAIN VA70) PVP4_ROTHWOUTER CAPSID PROTEIN HUMAN ROTAVIRUS (SEROTYPE 181-207 482-507 VP41/STRAIN WA) PVP4_ROTP5 OUTER CAPSID PROTEIN PORCINE ROTAVIRUS (SEROTYPE235-250 483-508 VP4 5/STRAIN OSU) PVP4_ROTPC OUTER CAPSID PROTEINPORCINE ROTAVIRUS (GROUP 487-512 VP4 C/STRAIN COWDEN) PVP4_ROTPG OUTERCAPSID PROTEIN PORCINE ROTAVIRUS (SEROTYPE 234-249 482-507 VP4GOTTFRIED) PVP4_ROTPY OUTER CAPSID PROTEIN PORCINE ROTAVIRUS 235-250483-508 VP4 (SEROTYPE YM) PVP4_ROTRH OUTER CAPSID PROTEIN RHESUS VIRUS483-508 VP4 PVP4_ROTSF OUTER CAPSID PROTEIN SIMIAN 11 ROTAVIRUS (STRAIN483-508 VP4 SA11-FEM) PVP4_ROTSS OUTER CAPSID PROTEIN SIMIAN 11ROTAVIRUS (STRAIN 395-411 483-508 VP4 SA11-SEM) PVP4_SBMV P4 PROTEINSOUTHERN BEAN MOSAIC VIRUS 90-114 PVP4_WTV NONSTRUCTURAL PROTEIN WOUNDTUMOR VIRUS 192-215 416-438 498-519 564-591 PNS4 PVP5_BTV10 OUTER CAPSIDPROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 326-345 494-517 VP510/ISOLATE USA) PVP5_BTV11 OUTER CAPSID PROTEIN BLUETONGUE VIRUS(SEROTYPE 295-317 326-345 494-517 VP5 11/ISOLATE USA) PVP5_BTV13 OUTERCAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 494-517 VP5 13/ISOLATEUSA) PVP5_BTV1A OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 87-102295-317 VP5 1/ISOLATE AUSTRALIA) PVP5_BTV1S OUTER CAPSID PROTEINBLUETONGUE VIRUS (SEROTYPE 295-317 VP5 1/ISOLATE SOUTH AFRICA)PVP5_BTV2A OUTER CAPSID PROTEIN BLUETONGUE VIRUS (SEROTYPE 295-317 VP52/ISOLATE USA) PVP5_RDV OUTER COAT PROTEIN P5 RICE DWARF VIRUS 265-284622-639 690-715 PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 9-27232-249 261-276 10/ISOLATE USA) PVP61_NPVAC 61 KD PROTEIN AUTOGRAPHACALIFORNICA 321-337 438-462 NUCLEAR POLYHEDROSIS VIRUS PVP62_BTV10 VP6PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 257-372 10/ISOLATE USA)PVP62_MRDV PROB NONSTRUCTURAL MAIZE ROUGH DWARF VIRUS 130-146 36 3 KDPROTEIN PVP64_NPVOP MAJOR ENV ORGYIA PSEUDOTSUGATA 81-99 235-252 286-313GLYCOPROTEIN PREC MULTICAPSID POLYHEDROSIS VIRUS PVP67_NPVAC MAJOR ENVAUTOGRAPHA CALIFORNICA 84-102 238-255 GLYCOPROTEIN PREC NULCEARPOLYHDEDROSIS VIRUS PVP67_MPVGM MAJOR ENVELOPE GALLERIA MELLONELLA155-172 GLYCOPROTEIN NUCLEAR POLYHEDROSIS VIRUS PVP6_BTV11 VP6 PROTEINBLUETONGUE VIRUS (SEROTYPE 5-23 228-245 257-272 11/ISOLATE USA)PVP6_BTV13 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23 228-245 257-27213/ISOLATE USA) PVP6_BTV17 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 5-23228-245 257-272 17/ISOLATE USA) PVP6_BTV1S VP6 PROTEIN BLUETONGUE VIRUS(SEROTYPE 9-27 232-249 261-276 1/ISOLATE SOUTH AFRICA) PVP6_BTV2A VP6PROTEIN BLUETONGUE VIRUS (SEROTYPE 204-221 233-248 2/ISOLATE USA)PVP6_WTV STURCTURAL PROTEIN P6 WOUND TUMOR VIRUS 374-397 PVP6_WTVNJSTURCTURAL PROTEIN P6 WOUND TUMOR VIRUS 374-397 PVP74_NPVAC P74 PROTEINAUTOGRAPHA CALIFORNICA 254-275 NUCLEAR POLYHEDROSIS VIRUS PVP75_HSVSAPROBABLE MEMBRANE HERPESVIRUS SAIMIRI 127-147 ANTIGEN 75 (STRAIN 11)PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA 274-301 405-420 678-704NUCLEAR POLYHEDROSIS VIRUS PVP7_BTV13 VP7 CORE PROTEIN BLUETONGUE VIRUS(SEROTYPE 197-222 13/ISOLATE USA) PVP7_EHDV1 VP7 CORE PROTEIN EPIZOOTICHEMORRHAGIC 205-222 301-323 DISEASE VIRUS (SEROTYPE 1) PVP7_RDVNONSTRUCTURAL PROTEIN RICE DWARF VIRUS 400-416 PNS7 PVP7_WTVNONSTRUCTURAL PROTEIN WOUND TUMOR VIRUS 262-285 PNS7 PVS05_ROTH1NONSTRUCTURAL PROTEIN HUMAN ROTAVIRUS (STRAIN 140-157 428-450 457-473NCVP2 IGV-80-3) PVS05_ROTPC NONSTRUCTURAL PROTEIN PORCINE ROTAVIRUS(GROUP 88-112 NS53 C/STRAIN COWDEN) PVS05_ROTS1 NONSTRUCTURAL PROTEINSIMINA 11 ROTAVIRUS 399-414 NCVP2 SA11) PVS06_ROTBR VP6 PROTEIN BOVINEROTAVIRUS (STRAIN RF) 202-225 PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS(GROUP C/ 64-85 STRAIN SHINTOKU) PVS06_ROTBU VP6 PROTEIN BOVINEROTAVIRUS (STRAIN UK) 202-225 PVS06_ROTEF VP6 PROTEIN EQUINE ROTAVIRUS(STRAIN 202-225 F1-14) PVS06_ROTE11 VP6 PROTEIN EQUINE ROTAVIRUS (STRAIN202-225 H-2) PVS06_ROTGA VP6 PROTEIN ROTAVIRUS (GROUP B/STRAIN 22-40ADRV) (ADULT DIARRHEA ROTAVIRUS) PVS06_ROTG1 VP6 PROTEIN ROTAVIRUS(GROUP B/ 22-40 STRAIN IDIR) PVS06_ROTH1 VP6 PROTEIN HUMAN ROTAVIRUS(SEROTYPE 202-225 1/STRAIN 1076) PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS(GROUP C/ 64-85 STRAIN BRISTOL) PVS06_ROTHS VP6 PROTEIN HUMAN ROTAVIRUS(SEROTYPE 202-225 2/STRAIN S2) PVS06_ROTHW VP6 PROTEIN HUMAN ROTAVIRUS(SEROTYPE 202-225 1/STRAIN WA) PVS06_ROTPC VP6 PROTEIN PORCINE ROTAVIRUS(GROUP C/ 64-85 314-340 STRAIN COWDEN) PVS06_ROTPG VP6 PROTEIN PORCINEROTAVIRUS (STRAIN 202-225 GOTTFRIED) PVS07_ROTBJ GLYCOPROTEIN VP7 BOVINEROTAVIRUS (STRAIN 131-155 KN-4) PVS08_RPTPC GLYCOPROTEIN VP7 PORCINEROTAVIRUS (GROUP C/ 117-136 STRAIN COWDEN) PVS08_ROTS1 NONSTRUCTURALPROTEIN SIMINA 11 ROTAVIRUS 274-295 NCVP4 (STRAIN SA11) PVS09_ROTB6GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131-155 6/STRAIN 61A)PVS09_ROTBA GLYCOPROTEIN VP7 BOVINE ROATVIRUS (STRAIN 131-155 A44)PVS09_ROTBK GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (STRAIN 131-155 KK3)PVS09_ROTBT GLYCOPROTEIN VP7 BOVINE ROTAVIRUS (SEROTYPE 131-155 1/STRAINT449) PVS09_ROTC7 GLYCOPROTEIN VP7 CHICKEN ROTAVIRIUS A 134-158(SEROTYPE 7/STRAIN CH2) VPS09_ROTEL GLYCOPROTEIN VP7 EQUINE ROTATVIRUS(STRAIN 131-155 L338) PVS09_ROTG1 GLYCOPROTEIN VP7 ROTAVIRUS (GROUP B/205-232 PRECURSOR IDIR) PVS09_ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(SEROTYPE 131-155 197-212 4/STRAIN RV-4) PVS09_ROTHA GLYCOPROTEIN VP7 (HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN HU5) PVS09_ROTHDaGLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAIN DS1)PVS09_TOTH1 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-212 2/STRAINHN126) PVS09_ROTHL GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (STRAIN L26) 131-155197-212 PVS09_ROTHM GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155197-212 1/STRAIN M37) PVS09_ROTHO GLYCOPROTEIN VP7 HUMAN ROTAVIRUS(SEROTYPE 131-155 197-212 1/STRAIN MO AND STRAIN D) PVS09_ROTHPGLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SERPTYPE 131-155 3/STRAIN P)PVS09_ROTH4 GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 131-155 3/STRAINRRV) PVS09_ROTHV GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 197-2124/STRAIN VA70) PVS09_ROTHW GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE131-155 197-212 1/STRAIN WA) PVS09_ROTPS GLYCOPROTEIN VP7 PORCINEROTAVIRUS (SEROTYPE 131-155 197-212 5/STRAIN OSU) PVS09_ROTP6GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 131-155 5/STRAIN TFR-41)PVS09_ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE 197-2124/STRAIN BEN-144) PVS09_ROTPM GLYCOPROTEIN VP7 PORCINE ROTAVIRUS(SEROTYPE 197-212 4/STRAIN BM1-1) PVS09_ROTRH GLYCOPROTEIN VP7 RHESUSROTAVIRUS 131-155 PVS09_ROTS1 GLYCOPROTEIN VP7 SIMIAN 11 ROTAVIRUS131-155 (STRAIN SA11) PVS11_ROTGA NONSTRUCTURAL PROTEIN ROTAVIRUS (GROUPB/STRAIN 136-153 ADRV) (ADULT DIARRHEA ROTAVIRUS) PVSH_HRSVA SMALLHYDROPHOBIC HUMAN RESPIRATORY 16-41 PROTEIN SYNCYTIAL VIRUS (STRAIN A2)PVSH_MUMP1 SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN SBL-1), 7-29 PROTEINAND MUMPS VIRUS (STRAIN SBL) PVSH_MUMP2 SMALL HYDROPHOBIC MUMPS VIRUS(STRAIN 7-29 PROTEIN EDINGBURGH 2 & 6) PVSH_MUMP4 SMALL HYDROPHOBICMUMPS VIRUS (STRAIN 7-29 PROTEIN EDINGBURGH 4) PVSH_MUMPA SMALLHYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN MATSUYAMA) PVSH_MUMPBSMALL HYDROPHOBIC MUMPS VIRUS (STRAIN BELFAST) 7-29 PROTEIN PVSH_MUMPESMALL HYDROPHOBIC MUMPS VIRUS (STRAIN ENDERS) 7-29 PROTEIN PVSH_MUMPJSMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 7-29 PROTEIN JERYL-LYNN)PVSH_MUMPK SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN KILHAM) 7-29 PROTEINPVSH_MUMPL SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN BRISTOL L) 6-29 PROTEINPVSH_MUMPM SMALL HYDROPHOBIC MUMPS VIRUS (STRAIN 10-29 PROTEIN MIYAHRARAVACCINE) PY8_SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE 10-27VIRUS PY97_ADE07 HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54-77 EARLYPROTEIN PY9K2_SSV1 HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKE 16-41 62-77PROTEIN PARTICLE SSV1 PYAL1-EBV HYPOTHETICAL BALF1 EPSTEIN-BARR VIRUS205-220 PROTEIN (STAIN B95-8) SMALL HYDROPHOBIC PROTEIN PYB09_FOWPMHYPOTHETICAL BAMHI- FOWLPOX VIRIS (ISOLATE 49-67 ORF9 PROTEINHP-438[MUNICH]) PYB10_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRIS (ISOLATE84-100 ORF9 PROTEIN HP-438[MUNICH]) PYB12_FOWPM HYPOTHETICAL BAMHI-FOWLPOX VIRIS (ISOLATE 114-134 154-169 ORF9 PROTEIN HP-438[MUNICH])PYBL2-SFV3L BEL-2 PROTEIN SIMIAN FOAMY VIRUS 113-128 (TYPE 3/STRAIN LK3)PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETROVIRUS 52-78 PYDH1_HSVSC HYP 287 KD PROTEIN HERPESVIRUS SAIMIRIR 206-230 IN DHFR 3'REGION (SUBGROUPC/STRAIN 488) PYDH3_HSVSC HYP 9 5 KD PROTEIN HERPESVIRUS SAIMIRIR 69-90IN DHFR 3'REGION (SUBGROUP C/STRAIN 488) PYEC4_EBV HYPOTHETICAL EC-RF4EPSTEIN-BARR VIRUS 200-222 PROTEIN (STRAIN B95-8) PYGA1_HSVMBHYPOTHETICAL 23 6 KD MAREK'S DISEADE 175-190 PROTEIN HERPESVIRUS (STRAINBC-1) PYGA1_HSVMM HYPOTHETICAL 23 6 KD MAREK'S DISEADE 175-190 PROTEINHERPESVIRUS (STRAIN MD5) PYHL4_HCMVA HYPOTHETICLA PROTEIN HUMANCYTOMEGALOVIRUS 101-121 HHLF4 (STRAIN AD169) PYHR3_VACCV HYP HOST RANGE27 4 VACCINIA VIRUS (STRAIN WR) 86-102 PROTEIN PYIO2_CMVAS HYP PROTEININ MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVM1 HYPPROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMSHYP PROTEIN IN MURINE CORONAVIRUS MHV 7-33 NUCLEOCAPSID ORF PYKR2_EBVHYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS 67-90 PROTEIN (STRAIN B95-8)PYL12_ADE41 HYPOTHETICAL 8 0 KD HUMAN ADENOVIRUS TYPE 41 53-73 PROTEINPYOR1_TTV1 HYPOTHETICAL 7 9 KD THERMOPROTEUS TENXA VIRUS 13-40 PROTEIN 1(STRAIN KRA1) PYOR2_COYMV HYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE23-49 PROTEIN VIRUS PYOR2_EAV HYPOTHETICAL 25 6 KD EQUINE ARTERITISVIRUS 165-192 PROTEIN PYOR2_LELV HYPOTHETICAL 28 4 KD LELYSTAD VIRUS196-212 PROTEIN PYOR3_LVX HYPOTHETICAL 11 8 KD LILY VIRUX X 71-92PROTEIN PYOR3_NMV HYPOTHETICAL 14 KD NARCISSUS MOSAIC VIRUS 7-30 PROTEINPYOR3_PVX HYPOTHETICAL 12 KD POTATO VIRUS X 11-34 PROTEIN PYOR3_PVXCPHYPOTHETICAL 12 KD POTATO VIRUS X (STRAIN CP) 11-34 PROTEIN PYOR3_WCMVMHYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS 9-29 PROTEIN (STRAIN M)PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVER MOSAIC VIRUS 9-31 PROTEINPY0R5_ADEG1 HYPOTHETICAL 31 5 KD AVIAN ADENOVIRUS GAL1 69-86 PROTEIN(STRAIN PHELPS) (FOWL AND ADEOVIRUS 1) PYOR5_EAV HYPOTHETICAL 28 7 KDEQUINE ARTERITIS VIRUS 139-158 PROTEIN PYORP_TTV1 HYPOTHETICAL 20 2 KDTHERMOPROTEUS TEXAX VIRUS 91-115 PROTEIN (STRAIN KRA1) PYR24_RTBVHYPOTHETICAL P24 RICE TUNGRO BACILLIFORM 2-25 104-126 PROTEIN VIRUSPYP24_RTBVP HYPOTHETICAL P24 RICE TUNGRO BACILLIFORM 2-25 104-126PROTEIN VIRUS (ISOLATE PHILIPPINES) PYP47_NPVAC HYPOTHETICAL 43 5 KDAUTOGRAPHA CALIFORNICA 211-234 PROTEIN NUCLEAR POLYHEDROSIS VIRUSPYP62_NPVOP HYPOTHETICAL 12 2 KD ORGYIA PSEUDOSUGATA 82-108 PROTEINMULTICAPSID POLYHEDROSIS VIRUS PYP63_NPVOP HYPOTHETICAL 12 2 KD ORGYIAPSEUDOSUGATA 27-54 215-230 PROTEIN MULTICAPSID POLYHEDROSIS VIRUSPYP7B_TNVD HYPOTHETICAL P7B TOBACCO NECROSIS VIRUS 13-31 PROTEIN (STRAIND) (TNV) PYPO4_NPVLD HYPOTHETICAL 8 5 KD LYMANTRIA DISPAR MULTI- 16-35PROTEIN CAPSID NUCLEAR POLYHEDROSIS VIRUS PYRF1_HSV6G HYPOTHETICALPROTEIN HERPES SIMPLEX VIRUS 42-66 RF1 (TYPE 6/STRAIN GS) PYRF2_HSV6GHYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 55-74 RF2 (TYPE 6/STRAIN GS)PYRF3_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 32-56 RF3 (TYPE6/STRAIN GS) PYRP1_IRV6 REPETITIVE PROTEIN CHILD IRIDESCENT VIRUS (CIV)20-43 ORF1 (INSECT IRIDESCENT VIURS TYPE 6) PYR41_IRV6 REPETITIVEPROTEIN CHILD IRIDESCENT VIRUS (CIV) 44-69 ORF4 (INSECT IRIDESCENT VIURSTYPE 6) PYRP6_IRV6 REPETITIVE PROTEIN CHILD IRIDESCENT VIRUS (CIV)98-123 179-204 260-285 ORF6 (INSECT IRIDESCENT VIURS TYPE 6) PYRR1_EBVHYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 199-223 PROTEIIN (STRAIN B95-8)PYRR2_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 164-182 PROTEIIN (STRAINB95-8) PYsR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 92-113 PROTEIIN(STRAIN B95-8) PYtR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 383-401PROTEIIN (STRAIN B95-8) PYUB2_NPVOP HYPOTHETICAL 24 0 KD ORGYIAPSEUDOTSUGATA 133-152 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS (OPPYVA3_VACCC HYPOTHETICAL 8 4 KD VACCINIA VIRUS (STRAIN 82-99 140-156PROTEIN COPENHAGEN) PYVAF_VACCC HYPOTHETICAL 8 4 KD VACCINIA VIRUS(STRAIN 17-40 51-68 PROTEIN COPENHAGEN) PYVAL_VACCV HYPOTHERTICAL 9 9 KDVACCINIA VIRUS (STRAIN WR), 21-43 PROTEIN AND VACCINIA VIRUS (STRAINCOPE PYVBG_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 37-54PROTEIN COPENHAGEN) PYVCA_VACCC HYPOTHETICAL 8 0 KD VACCINIA VIRUS(STRAIN 18-35 COPENHAGEN) PYVD2_VACCV HYPOTHETICAL 8 6 KD VACCINIA VIRUS(STRAIN WR), 5-26 36-52 PROTEIN AND VACCINIA VIRUS (STRAIN COPE)PYVDA_VACCC HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN 22-38 44-64PROTEIN COPENHAGEN) PYVDA_VACCV HYPOTHETICAL 9 2 KD VACCINIA VIRUS(STRAIN WR) 3-18 22-38 44-64 PROTEIN PYVFA_VACCC HYPOTHETICLA 7 1 KDVACCINIA VIRUS (STRAIN 48-67 PROTEIN COPENHAGEN) PVYFF_VACCCHYPOTHETICAL 8 8 KD VACCINIA VIRUS (STRAIN 23-42 PROTEIN COPENHAGEN)PYVGA_VACCC HYPOTHETICAL 14 3 KD VACCINIA VIRUS (STRAIN 105-127 PROTEINCOPENHAGEN) PYVKB_VACCC HYPOTHETICAL 9 0 KD VACCINIA VIRUS (STRAIN 54-70PROTEIN COPENHAGEN) PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS150-166 PROTEIN (STRAIN B95-8) PY14K_CMSV HYPOTHETICAL 14 5 KD CHLORISISSTRIATE MOSAIC 54//80 PROTEIN VIRUS PY18K_SSV1 HYPOTHETICAL 18 0 KDSULFOLOBUS VIRUS-LIKE 100-125 141-162 PROTEIN PARTICLE SSV1 PY206_ADE07HYPOTHETICAL 20 6 KD HUMAN ADENOVIRUS TYPE 7 50-73 EARLY PROTEINPY25K_BNYVF RNA-3 HYPOTHETICAL 24 7 BEET NECROTIC YELLOW VEIN 163-188 KDPROTEIN MOSAIC VIRUS (ISOLATE F2) PY29K_NPVAC HYPOTHETICAL 29 9 KDAUTOGRAPHA CALIFORNICA 90-106 PROTEIN NECROSIS POLYHEDROSIS VIRUSPY2_SCOMV HYPOTHETICAL PROTEIN 2 SOYBEAN CHLOROTIC MOTTLE 65-90 VIRUSPY32K_SSV1 HYPOTHETICAL 31 7 KD SULFOLOBUS VIRUS-LIKE 122-142 PROTEINPARTICLE SSV1 PY6K0_SSV1 PY32K_SSV1 HYPOTHETICAL 6 0 KD SULFOLOBUSVIRUS-LIKE 23-44 PROTEIN PARTICLE SSV1 PY7K4_VACCV HYPOTHETICAL 7 K KDVACCINIA VIRUS (STRAIN WR) 21-36 PROTEIN PY7K_MEASH HYPOTHETICAL 7 KDMEASLES VIRUS (STRAIN HALLE) 3-25 PROTEIN PY7_SOCMV HYPOTHETICAL PROTEIN7 SOYBEAN CHLOROTIC MOTTLE 96-120 VIRUS PY85K_SSV1 HYPOTHETICAL 85 7 KDSULFOLOBUS VIRUS-LIKE 80-105 155-173 543-565 657-675 764-784 PROTEINPARTICLE SSV1 PY8_SOCMV HYPOTHETICAL PROTEIN 8 SOYBEAN CHLOROTIC MOTTLE10-27 VIRUS PY97_ADE07 HYPOTHETICAL 9 7 KD HUMAN ADENOVIRUS TYPE 7 54-77EARLY PROTEIN PY9K2_SSV1 HYPOTHETICAL 9 2 KD SULFOLOBUS VIRUS-LIKE 16-4162-77 PROTEIN PARTICLE SSV1 PYAL1_EBV HYPOTHETICAL BALF1 EPSTEIN-BARRVIRUS 205-220 PROTEIN (STRAIN B95-8) PYB01_FOWPM HYPOTHETICAL BAMHI-FOWLPOX VIRUS (ISOLATE 354-374 ORF1 PROTEIN HP-438[MUNICH]) PYB07_FOWPMHYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 104-121 ORF7 PROTEINHP-438[MUNICH]) PYB09_FOWPM HYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE49-67 ORF9 PROTEIN HP-438[MUNICH]) PYB010_FOWPM HYPOTHETICAL BAMHI-FOWLPOX VIRUS (ISOLATE 84-100 ORF10 PROTEIN HP-438[MUNICH]) PYB012_FOWPMHYPOTHETICAL BAMHI- FOWLPOX VIRUS (ISOLATE 114-134 154-169 ORF12 PROTEINHP-438[MUNICH]) PYBL2_SFV3L BEL-2 PROTEIN SIMIAN FOAMY VIRUS 113-128(TYPE 3/STRAIN LK3) PYBL3_FOAMV BEL-3 PROTEIN HUMAN SPUMARETOVIRUS 52-78PYDH1_HSVSC HYPOTHETICAL 28 7 KD HERPESVIRUS SAIMIRI 206-230 PROTEIN INDHFR (SUBGROUP C/STRAIN 488) 3'REGION PYDH3_HSVSC HYPOTHETICAL 9 5 KDHERPESVIRUS SAIMIRI 69-90 PROTEIN IN DHFR (SUBGROUP C/STRAIN 488)3'REGION PYEC4_EBV HYPOTHETICAL EC-RF4 EPSTEIN-BARR VIRUS 200-222PROTEIN (STRAIN B95-8) PYGA1_HSVMB HYPOTHETICAL 23 6 KD MAREK'S DISEASE175-190 PROTEIN HERPESVIRUS (STRAIN BC-1) PYGA1_HSVMB HYPOTHETICAL 23 6KD MAREK'S DISEASE 175-190 PROTEIN HERPESVIRUS (STRAIN MID-1)PYHL4-HCMVA HYPOTHETICAL PROTEIN HUMAN CYTOMEGALOVIRUS 101-121 HHLF4(STRAIN AD169) PYHR3_VACCV HYPOTHETICAL HOST VACCINAI VIRUS (STRAIN WR)86-102 RANGE 27 4 KD PROTEIN PYIO2_CVMA5 HYPOTHETICAL PROTEIN IN MURINECORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMA5 HYPOTHETICALPROTEIN IN MURINE CORONAVIRUS MHV 141-156 NUCLEOCAPSID ORF PYIOR_CVMA5HYPOTHETICAL PROTEIN IN MURINE CORONAVIRUS MHV 7-33 NUCLEOCAPSID ORFPYKR2_EBV HYPOTHETICAL BKRF2 EPSTEIN-BARR VIRUS 67-90 PROTEIN (STRAINB95-8) PYUL12_ADE41 HYPOTHETICAL 8 0 KD HUMAN ADENOVIRUS TYPE 41 53-73PROTEIN PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS 76-100 128-155215-241 330-350 (STRAIN B95-8) PYMSP_IRV22 HYPOTHETICAL 15 9 KD SIMULIUMIRIDESCENT VIRUS 23-46 PROTEIN (INSECT IRIDESCENT VIRUS TYPE 22)PYOR1_ADEG1 HYPOTHETICAL PROTEIN AVIAN ADENOVIRUS GAL1 59-80 (STRAINPHELPS) (FOWL ADENOVIRUS 1) PYOR1_COYMV HYPOTHETICAL 23 KD COMMELINAYELLOW MOTTLE 56-83 PROTEIN VIRUS PYOR1_TTV1 HYPOTHETICAL 7 9 KDTHERMOPROTEUS TENAX VIRUS 13-40 PROTEIN 1 (STRAIN KRA1) PYOR2_COYMVHYPOTHETICAL 15 KD COMMELINA YELLOW MOTTLE 23-49 PROTEIN VIRUS PYOR2_EAVHYPOTHETICAL 25 6 KD EQUINE ARTERITIS VIRUS 165-192 PROTEIN PYOR2_LELVHYPOTHETICAL 28 4 KD LELYSTAD VIRUS 196-212 PROTEIN PYOR3_LVXHYPOTHETICAL 11 8 KD LILY VIRUS 71-92 PROTEIN PYOR3_NMV HYPOTHETICAL 14KD NARCISSUS MOSAIC VIRUS 7-30 PROTEIN PYOR3_PVX HYPOTHETICAL 12 KDPOTATO VIRUX X 11-34 PROTEIN PYOR3_PVXCP HYPOTHETICAL 12 KD POTATO VIRUSX (STRAIN CP) 11-34 PROTEIN PYOR3_WCMVM HYPOTHETICAL 13 KD WHITE CLOVERMOSAIC 9-29 PROTEIN VIRUS PYOR3_WCMVO HYPOTHETICAL 13 KD WHITE CLOVERMOSAIC 9-31 PROTEIN VIRUS PYOR5_ADEG1 HYPOTHETICAL 31 5 KD AVIANADENOVIRUS GAL1 69-86 PROTEIN (STRAIN PHELPS) (FOWL ADENOVIRUS 1)PYOR5_EAV HYPOTHETICAL 28 7 KD EQUINE ARTERITISA VIRUS 139-158 PROTEINPYOR6_NMV HYPOTHETICAL 10 KD NARCISSUS MOSAIC VIRUS 10-26 PROTEINPYOR1_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAX VIRUS 13-32 PROTEIN1 (STRAIN KRA1) PYOR1_TTV1 HYPOTHETICAL 16 6 KD THERMOPROTEUS TENAXVIRUS 16-39 PROTEIN 1 (STRAIN KRA1) PYORM_TTV1 HYPOTHETICAL 38 6 KDTHERMOPROTEUS TENAX VIRUS 82-102 233-256 PROTEIN 1 (STRAIN KRA1)PYORP_TTV1 HYPOTHETICAL 20 2 KD THERMOPROTEUS TENAX VIRUS 91-115 PROTEIN1 (STRAIN KRA1) PYP24_RTBV HYPOTHETICAL P24 RICE TUNGRO BASCILLIFORM2-25 104-126 PROTEIN VIRUS PYP24_RTBVP HYPOTHETICAL P24 RICE TUNGROBASCILLIFORM 2-25 104-126 PROTEIN VIRUS (ISOLATE PHILIPPINES)PYP47_NPVAC HYPOTHETICAL 43 5 KD AUTOGRAPHA CALIFORNICA 211-234 PROTEININ P47 NUCLEAR POLYHEDROSIS VIRUS 3'REGION PYP62_NPVOP HYPOTHETICAL 43 5KD ORGYIA PSEUDOTSUGATA 82-108 PROTEIN IN P47 MULTICAPSID POLYHEDROSIS3'REGION VIRUS (OP PYP63_NPVOP HYPOTHETICAL 43 5 KD ORGYIA PSEUDOTSUGATA27-54 215-230 PROTEIN IN P47 MULTICAPSID POLYHEDROSIS 3'REGION VIRUS (OPPYP7B_TNVD HYPOTHETICAL P7B TOBACCO NECROSIS VIRUS 13-31 PROTEIN (STRAIND) (TNV) PYPO4_HPVLD HYPOTHETICAL 8 5 KD LYMANTRIA DISPAR MULTI- 16-35PROTEIN IN POL CAPSID NUCLEAR POLYHEDROSIS 3'REGION VIRUS PYRF1_HSV6GHYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 42-66 RF1 (TYPE 6/STRAIN GS)PYRF2_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 55-74 RF2 (TYPE6/STRAIN GS) PYRF3_HSV6G HYPOTHETICAL PROTEIN HERPES SIMPLEX VIRUS 32-56RF3 (TYPE 6/STRAIN GS) PYRP1_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENTVIRUS 20-43 ORF1 (CIV) (INSECT IRIDESCENT VIRUS TYPE 6) PYRP4_IRV6REPETITIVE PROTEIN CHILO IRIDESCENT VIRUS 44-69 ORF4 (CIV) (INSECTIRIDESCENT VIRUS TYPE 6) PYRP5_IRV6 REPETITIVE PROTEIN CHILO IRIDESCENTVIRUS 98-123 179-204 260-285 ORF5 (CIV) (INSECT IRIDESCENT VIRUS TYPE 6)PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 199-223 PROTEIN (STRAINB95-8) PYRR2_EBV HYPOTHETICAL BRRF2 EPSTEIN-BARR VIRUS 164-182 PROTEIN(STRAIN B95-8) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS 92-113PROTEIN (STRAIN B95-8) PYRR1_EBV HYPOTHETICAL BRRF1 EPSTEIN-BARR VIRUS383-401 PROTEIN (STRAIN B95-8) PYUB2_NPVOP HYPOTHETICAL 24 0 KD ORGYIAPSEUDOTSUGATA 133-152 PROTEIN MULTICAPSID POLYHEDROSIS VIRUS PYVAE_VACCCHHYPOTHETICAL 18 2 KD VACCINIA VIRUS (STRAIN 82-99 140-156 PROTEINCOPENHAGEN) PYVAF_VACCC HHYPOTHETICAL 8 4 KD VACCINIA VIRUS (STRAIN17-40 51-68 PROTEIN COPENHAGEN) PYVAL_VACCV HYPOTHETICAL 9 9 KD VACCINIAVIRUS (STRAIN WR), 21-43 PROTEIN AND VACCINIA VIRUS (STRAIN COPEPYVAT_VACCV HYPOTHETICAL 8 9 KD VACCINIA VIRUS (STRAIN WR), 28-46PROTEIN AND VACCINIA VIRUS (STRAIN COPE PYVBE_VACCV HYPOTHETICAL 10 5 KDVACCINIA VIRUS (STRAIN WR), 9-28 PROTEIN AND VACCINIA VIRUS (STRAIN COPEPYVBG_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN 37-54 PROTEINCOPENHAGEN) PYVCA_VACCC HYPOTHETICAL 11 2 KD VACCINIA VIRUS (STRAIN18-35 PROTEIN COPENHAGEN) PYVD2_VACCV HYPOTHETICAL 8 6 KD VACCINIA VIRUS(STRAIN WR), 5-26 36-52 PROTEIN AND VACCINIA VIRUS (STRAIN COPEPYVDA_VACCC HYPOTHETICAL 9 2 KD VACCINIA VIRUS (STRAIN 22-38 44-64PROTEIN COPENHAGEN) PYVDA_VACCV HYPOTHETICAL 9 2 KD VACCINIA VIRUS(STRAIN WR) 3-18 22-398 44-64 PROTEIN PYVFA_VACCC HYPOTHETICAL 7 1 KDVACCINIA VIRUS (STRAIN 48-67 PROTEIN COPENHAGEN) PYVFF_VACCCHYPOTHETICAL 8 8 KD VACCINIA VIRUS (STRAIN 23-42 PROTEIN COPENHAGEN)PYVGA_VACCC HYPOTHETICAL 14 3 KD VACCINIA VIRUS (STRAIN 105-127 PROTEINCOPENHAGEN) PYVKB_VACCC HYPOTHETICAL 9 0 KD VACCINIA VIRUS (STRAIN 54-70PROTEIN COPENHAGEN) PYZL2_EBV HYPOTHETICAL BZLF2 EPSTEIN-BARR VIRUS150-166 PROTEIN (STRAIN B95-8)

TABLE XIV SEARCH RESULTS SUMMARY FOR P23TLZIPC MOTIF PCGENE P23CTLZIPAll Viruses (no bacteriophages) FILE NAME PROTEIN VIRUS AREA 1 AREA 2AREA 3 AREA 4 AREA 5 AREA 6 AREA 7 PPOL2_TBRVS RNA2 POLYPROTEIN TOMATOBLACK RING VIRUS (STRAIN S) 617-651 1041-1077 (TBRV) PPOL2_TRSVR RNA2POLYPROTEIN TOMATO RINGSPOT VIRUS (ISOLATE 316-347 RASPBERRY) (TOMRSV)PPOLG_BOVEV GENOME POLYPROTEIN BOVINE ENTEROVIRUS (STRAIN VG-5-27)1833-1866 2001-2037 (BEV) PPOLG_BVDVN GENOME POLYPROTEIN BOVINE VIRALDIARRHEA VIRUS 102-135 1650-1678 3220-3248 (ISOLATE NADL) PPOLG_BVDVSGENOME POLYPROTEIN BOVINE VIRAL DIARRHEA VIRUS 102-135 1560-15883130-3158 (STRAIN SD-1) PPOLG_BYMV GENOME POLYPROTEIN BEAN YELLOW MOSAICVIRUS 226-255 PPOLG_COXA2 GENOME POLYPROTEIN COXSACKIEVIRUS A21 (STRAINCOE) 1120-1157 PPOLG_COXA3 GENOME POLYPROTEIN COXSACKIEVIRUS A23 (ECHO 9VIRUS) 67-99 (EC-9-V) PPOLG_COXA9 GENOME POLYPROTEIN COXSACKIEVIRUS A9(STRAIN GRIGGS) 1601-1633 PPOLG_COXB1 GENOME POLYPROTEIN COXSACKIEVIRUSB1 1582-1614 PPOLG_COXB3 GENOME POLYPROTEIN COXSACKIEVIRUS B3 1585-1617PPOLG_COXB4 GENOME POLYPROTEIN COXSACKIEVIRUS B4 1583-1615 PPOLG_COXB5GENOME POLYPROTEIN COXSACKIEVIRUS B5 835-868 1585-1617 PPOLG_DENISGENOME POLYPROTEIN DENGUE VIRUS TYPE 1 (STRAIN 1111-1145 1485-15192401-2434 SINGAPORE S275/90) PPOLG_DENIW GENOME POLYPROTEIN DENGUE VIRUSTYPE 1 (STRAIN WESTERN 1112-1146 PACIFIC) PPOLG_DEN26 GENOME POLYPROTEINDENGUE VIRUS TYPE 2 (STRAIN 16681) 61-95 1112-1146 PPOLG_DEN27 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN 61-95 1112-1146 16681-PDK53)PPOLG_DEN2D GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN D2-04) 61-95PPOLG_DEN2J GENOME POLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN JAMAICA)61-95 1112-1146 PPOLG_DEN2N GENOME POLYPROTEIN DENGUE VIRUS TYPE 2(STRAIN 364-398 NEW GUINEA C) PPOLG_DEN2P GENOME POLYPROTEIN DENGUEVIRUS TYPE 2 (STRAIN PR 159/S1) 61-95 1112-1146 PPOLG_DEN2T GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 2 (STRAIN TONGA 1974 832-866 PPOLG_DEN3GENOME POLYPROTEIN DENGUE VIRUS TYPE 3 61-95 2399-2432 PPOLG_DEN4 GENOMEPOLYPROTEIN DENGUE VIRUS TYPE 4 60-94 PPOLG_ECHG GENOME POLYPROTEINECHOVIRUS II (STRAIN GREGORY) 774-806 PPOLG_EMCV GENOME POLYPROTEINENCEPHALOMYOCARDITIS VIRUS 1194-1226 1463-1501 PPOLG_EMCVB GENOMEPOLYPROTEIN ENCEPHALOMYOCARDITIS VIRUS (STRAIN 1196-1228 1465-1503 EMC-BNONDIABETOGENIC) PPOLG_EMCVD GENOME POLYPROTEIN ENCEPHALOMYOCARDITISVIRUS (STRAIN 1196-1228 1465-1503 EMC-D DIABETOGENIC) PPOLG_FMDVI GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS (STRAIN 1036-1064 1098-11331167-1199 1465-1501 A10-61) (APHTHOVIRUS A) PPOLG_FMDVA GENOMEPOLYPROTEIN FOOT-AND-MOUTH DISEASE VIRUS (STRAIN 1036-1074 1098-11331167-1199 1465-1501 A12) (APHTHOVIRUS A) PPOLG_FMDVO GENOME POLYPROTEINFOOT-AND-MOUTH DISEASE VIRUS (STRAINS 1098-1133 1167-1199 1465-1501 OIKAND OIBFS) PPOLG_HCV1 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1)(HCV) 1640-1670 PPOLG_HCVA GENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAINALFORT) 1363-1393 1560-1588 3131-3159 (SWINE FEVER VIRUS) PPOLG_HCVBGENOME POLYPROTEIN HOG CHOLERA VIRUS (STRAIN 102-135 1560-1588 3131-3159BRESCIA) (SWINE FEVER VIRUS) PPOLG_HCVBK GENOME POLYPROTEIN HEPATITIS CVIRUS (ISOLATE BK) (HCV) 1640-1670 PPOLG_HCVH GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE H) (HCV) 1640-1670 PPOLG_HCVH4 GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE HCV-476) 254-291 (HCV)PPOLG_HCVJ6 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J6) (HCV)711-742 PPOLG_HCVJ8 GENOME POLYPROTEIN HEPATITIS C VIRUS (ISOLATE HC-J8)(HCV) 711-742 1893-1924 PPOLG_HCVJA GENOME POLYPROTEIN HEPATITIS C VIRUS(ISOLATE JAPANESE) 1640-1670 (HCV) PPOLG_HCVJT GENOME POLYPROTEINHEPATITIS C VIRUS (ISOLATE 1640-1670 HC-JT) (HCV) PPOLG_HCVTW GENOMEPOLYPROTEIN HEPATITIS C VIRUS (ISOLATE 1640-1670 TAIWAN) (HCVPPOLG_HPAV2 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 24A) 1514-15502068-2099 PPOLG_HPAV4 GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN 43C)1514-1550 2068-2099 PPOLG_HPAV8 GENOME POLYPROTEIN HEPATITIS A VIRUS(STRAIN 18F) 1514-1550 2068-2099 PPOLG_HPAVH GENOME POLYPROTEINHEPATITIS A VIRUS (STRAIN HM-175) 1515-1551 2069-2100 PPOLG_HPAVL GENOMEPOLYPROTEIN HEPATITIS A VIRUS (STRAIN LA) 1515-1551 2069-2100PPOLG_HPAVM GENOME POLYPROTEIN HEPATITIS A VIRUS (STRAIN MBB) 1515-15512069-2100 PPOLG_HPAVS GENOME POLYPROTEIN SIMIAN HEPATITIS A VIRUS(STRAIN 831-868 1517-1553 AGM-27) PPOLG_HRV14 GENOME POLYPROTEIN HUMANRHINOVIRUS 14 (HRV-14) 1094-1132 2005-2041 PPOLG_HRV1B GENOMEPOLYPROTEIN HUMAN RHINOVIRUS 1B 1453-1485 1816-1849 1983-2019 (HRV-1B)PPOLG_HRV2 GENOME POLYPROTEIN HUMAN RHINOVIRUS 2 (HRV-2) 1446-14751809-1842 1976-2012 PPOLG_HRV89 GENOME POLYPROTEIN HUMAN RHINOVIRUS 89(HRV-89) 1460-1492 1823-1856 1990-2026 PPOLG_HUEV7 GENOME POLYPROTEINHUMAN ENTEROVIRUS 70 (STRAIN J670/71 1108-1145 PPOLG_IBDVO STRUCTURALPOLYPROTEIN AVIAN INFECTIOUS BURSAL DISEASE VIRUS 222-260 (STRAIN OH)PPOLG_JAEV1 GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 61-951233-1269 1516-1549 2779-2813 3274-3311 (STRAIN SA-14) PPOLG_JAEV5GENOME POLYPROTEIN JAPANESE ENCEPHALITIS VIRUS 61-95 1233-1269 1516-15492779-2813 3274-3311 (STRAIN SA(V)) PPOLG_JAEVJ GENOME POLYPROTEINJAPANESE ENCEPHALITIS VIRUS 61-95 1233-1269 1516-1549 2779-28133274-3311 (STRAIN JAOARS982) PPOLG_JAEVN GENOME POLYPROTEIN JAPANESEENCEPHALITIS VIRUS 1161-1197 (STRAIN NAKAYAMA) PPOLG_KUNJM GENOMEPOLYPROTEIN KUNJIN VIRUS (STRAIN MRM61C) 61-95 561-594 3275-3312PPOLG_LANVT GENOME POLYPROTEIN LANGAT VIRUS (STRAIN TP21) 1157-11881519-1551 2230-2264 2366-2398 3095-3132 PPOLG_MCFA GENOME POLYPROTEINMOSQUITO CELL FUSING AGENT (CFA 1174-1206 1330-1359 FLAVIVIRUS)PPOLG_MDMV GENOME POLYPROTEIN MAIZE DWARF MOSAIC VIRUS (MDMV) 322-351PPOLG_MVEV GENOME POLYPROTEIN MURRAY VALLEY ENCEPHALITIS VIRUS 61-951305-1342 PPOLG_OMV GENOME POLYPROTEIN ORNITHOGALUM MOSAIC VIRUS 344-376PPOLG_PEMVC GENOME POLYPROTEIN PEPPER MOTTLE VIRUS (CALIFORNIA 826-8591086-1124 ISOLATE) (PEMV) PPOLG_POL1M GENOME POLYPROTEIN POLIOVIRUS TYPE1 (STRAIN MAHONEY) 1121-1158 PPOLG_POL1S GENOME POLYPROTEIN POLIOVIRUSTYPE 1 (STRAIN SABIN) 1122-1159 PPOLG_POL2L GENOME POLYPROTEINPOLIOVIRUS TYPE 2 (STRAIN LANSING) 1120-1157 PPOLG_POL2W GENOMEPOLYPROTEIN POLIOVIRUS TYPE 2 (STRAIN W-2) 1120-1157 PPOLG_POL32 GENOMEPOLYPROTEIN POLIOVIRUS TYPE 3 (STRAIN 23127) 1119-1156 PPOLG_POL3LGENOME POLYPROTEIN POLIOVIRUS TYPE 3 (STRAINS 1119-1156 P3/LEON/37 ANDP3/LEON 12A[1]B) PPOLG_PPVD GENOME POLYPROTEIN PLUM POX POTYVIRUS(STRAIN D) (PPV) 2960-2991 3084-3113 PPOLG_PPVEA GENOME POLYPROTEIN PLUMPOX POTYVIRUS (STRAIN EL AMAR) 1337-1368 1461-1490 (PPV) PPOLG_PPVNAGENOME POLYPROTEIN PLUM POX POTYVIRUS (ISOLATE NAT) (PPV) 2944-29753068-3097 PPOLG_PPVRA GENOME POLYPROTEIN PLUM POX POTYVIRUS (STRAINRANKOVIC) 2959-2990 3083-3112 (PPV) PPOLG_PSBMV GENOME POLYPROTEIN PEASEED-BORNE MOSAIC VIRUS 931-966 1411-1445 3149-3178 (STRAIN DPDI)PPOLG_PVYHU GENOME POLYPROTEIN POTATO VIRUS Y (STRAIN HUNGARIAN)1302-1336 3004-3033 (PVY) PPOLG_PVYN GENOME POLYPROTEIN POTATO VIRUS Y(STRAIN N) (PVY) 1302-1336 PPOLG_PYFVI GENOME POLYPROTEIN PARSNIP YELLOWFLECK VIRUS (ISOLATE 230-262 1110-1139 1903-1931 P-121) (PYFV)PPOLG_SBMVN GENOME POLYPROTEIN SOYBEAN MOSAIC VIRUS (STRAIN N) 245-274PPOLG_STEVM GENOME POLYPROTEIN ST LOUIS ENCEPHALITIS VIRUS 61-951301-1331 (STRAIN M51-7) PPOLG_SUMVS GENOME POLYPROTEIN SUGARCANE MOSAICVIRUS (STRAIN SC) 307-336 PPOLG_SVDVH GENOME POLYPROTEIN SWINE VESICULARDISEASE VIRUS 1585-1617 (STRAIN H/3′ 76) PPOLG_SVDVU GENOME POLYPROTEINSWINE VESICULAR DISEASE VIRUS 1585-1617 (STRAIN UKG/27/72) PPOLG_TBEVSGENOME POLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 835-869 1157-11882366-2398 3093-3130 (STRAIN SOFJIN) (TBEV) PPOLG_TBEVW GENOMEPOLYPROTEIN TICK-BORNE ENCEPHALITIS VIRUS 1157-1188 2366-2398 3095-3132(WESTERN SUBTYPE) (THEV) PPOLG_TEV GENOME POLYPROTEIN TOBACCO ETCH VIRUS(TEV) 827-865 2998-3027 PPOLG_TMEVB GENOME POLYPROTEIN THEILER'S MURINEENCEPHALOMYELITIS 1074-1102 1193-1221 1470-1508 1908-1939 VIRUS (STRAINBEAN 8386) PPOLG_TMEVD GENOME POLYPROTEIN THEILER'S MURINEENCEPHALOMYELITIS 1072-1100 1191-1219 1468-1506 1906-1937 VIRUS (STRAINDA) PPOLG_TMEVG GENMOE POLYPROTEIN THEILER'S MURINE ENCEPHALOMYELITIS1074-1102 1193-1221 1470-1508 1908-1939 VIRUS (STRAIN GDVH) PPOLG_TUMVGENOME POLYPROTEIN TURNIP MOSAIC VIRUS (TUMV) 1573-1602 PPOLG_TVMVGENOME POLYPROTEIN TOBACCO VEIN MOTTLING VIRUS (TVMV) 2698-2733PPOLG_WMV2 GENOME POLYPROTEIN WATERMELON MOSAIC VIRUS II 958-987PPOLG_WNV GENOME POLYPROTEIN WEST NILE VIRUS 61-95 557-590 3272-3309PPOLG_YEFV1 GENOME POLYPROTEIN YELLOW FEVER VIRUS (STRAIN 17D) 1157-11861228-1266 1495-1531 2308-2340 3092-3127 PPOLG_YEFV2 GENOME POLYPROTEINYELLOW FEVER VIRUS (STRAIN 1157-1186 1228-1266 1495-1531 2308-23403092-3127 PASTEUR 17D-204) PPOLG_ZYMV GENOME POLYPROTEIN ZUCCHINI YELLOWMOSAIC VIRUS (ZYMV) 329-358 PPOLH_POLIM GENOME POLYPROTEIN POLIOVIRUSTYPE I (STRAIN MAHONEY) 1122-1159 PPOLH_WMV2 GENOME POLYPROTEINWATERMELON MOSAIC VIRUS II 244-273 PPOLN_EEVVT NONSTRUCTURAL POLYPROTEINVENEZUELAN EQUINE ENCEPHALITIS 613-648 1436-1468 VIRUS (STRAIN TRINIDADDONKEY) PPOLN_FCVC6 NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS(STRAIN CFI/68 FIV) 327-365 (FCV) PPOLN_FCVF4 NON-STRUCTURAL POLYPROTEINFELINE CALICIVIRUS (STRAIN JAPANESE F4) 300-333 (FCV) PPOLN_FCVF9NON-STRUCTURAL POLYPROTEIN FELINE CALICIVIRUS (STRAIN F9) (FCV) 803-841PPOLN_HEVBU NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN BURMA)(HEV) 1618-1652 PPOLN_HEVME NON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS(STRAIN MEXICO) (HEV) 1616-1650 PPOLN_HEVMY NON-STRUCTURAL POLYPROTEINHEPATITIS E VIRUS (STRAIN MYANMAR) 1618-1652 (HEV) PPOLN_HEVPANON-STRUCTURAL POLYPROTEIN HEPATITIS E VIRUS (STRAIN PAKISTAN) 1617-1651(HEV) PPOLN_MIDDV NONSTRUCTURAL POLYPROTEIN MIDDELBURG VIRUS 25-57PPOLN_ONRVG NONSTRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS (STRAIN GULU)1144-1180 1404-1439 (ONN) PPOLN_RHDV NON-STRUCTURAL POLYPROTEIN RABBITHEMORRHAGIC DISEASE VIRUS 299-337 1562-1594 (RHDV PPOLN_SFVNONSTRUCTURAL POLYPROTEIN SEMLIKIFOREST VIRUS 1146-1175 1406-1441PPOLN_SINDO NONSTRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE OCKELBO/1454-1486 STRAIN EDSBYN 82-5) PPOLN_SINDV NONSTRUCTURAL POLYPROTEINSINDBIS VIRUS (STRAIN HRSP) 1454-1486 PPOLS_EEEV STRUCTURAL POLYPROTEINEASTERN EQUINE ENCEPHALITIS VIRUS 524-556 PPOLS_EEEV3 STRUCTURALPOLYPROTEIN EASTERN EQUINE ENCEPHALITIS VIRUS 525-557 (STRAIN VA33[TENBROECK]) PPOLS_EEVV8 STRUCTURAL POLYPROTEIN VENEZUELAN EQUINEENCEPHALITIS VIRUS 1203-1239 (STRAIN TC-83) PPOLS_EEVVT STRUCTURALPOLYPROTEIN VENEZUELAN EQUINE ENCEPHALITIS VIRUS 1203-1239 (STRAINTRINIDAD DONKEY) PPOLS_ONNVG STRUCTURAL POLYPROTEIN O'NYONG-NYONG VIRUS(STRAIN GULU) 1150-1182 1201-1235 (ONN) PPOLS_RRVN STRUCTURALPOLYPROTEIN ROSS RIVER VIRUS (STRAIN NB5092) (RRV) 1216-1250 PPOLS_RRVTSTRUCTURAL POLYPROTEIN ROSS RIVER VIRUS (STRAIN T48) (RRV) 1216-1250PPOLS_SFV STRUCTURAL POLYPROTEIN SEMLIKI FOREST VIRUS 1215-1251PPOLS_SINDO STRUCTURAL POLYPROTEIN SINDBIS VIRUS (SUBTYPE OCKELBO/1197-1233 STRAIN EDSBYN 82-5) PPOLS_SINDV STRUCTURAL POLYPROTEIN SINDBISVIRUS (STRAINS HRSP AND HRLP) 1197-1233 PPOLS_WEEV STRUCTURALPOLYPROTEIN WESTERN EQUINE ENCEPHALITIS VIRUS 1188-1224 PPOL_BIV06 POLPOLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 742-773 \ (ISOLATE 106) (BIV)PPOL_BIV27 POL POLYPROTEIN BOVINE IMMUNODEFICIENCY VIRUS 742-773(ISOLATE 127) (BIV) PPOL_BLVAU POL POLYPROTEIN BOVINE LEUKEMIA VIRUS(AUSTRALIAN 343-374 ISOLATE) (BLV) PPOL_CAEVC POL POLYPROTEIN CAPRINEARTHRITIS ENCEPHALITIS VIRUS 206-240 322-355 (STRAIN CORK) (CAEV)PPOL_COYMV PUTATIVE POLYPROTEIN COMMELINA YELLOW MOTTLE VIRUS 1234-12671484-1518 1750-1788 1800-1831 (COYMV) PPOL_EIAV9 POL POLYPROTEIN EQUINEINFECTIOUS ANEMIA VIRUS 166-198 506-539 (CLONE 1369) (EIAV) PPOL_EIAVCPOL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 166-198 506-539 (CLONECL22) (EIAV) PPOL_EIAVY POL POLYPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS166-198 505-538 (ISOLATE WYOMING) (EIAV) PPOL_FOAMV POL POLYPROTEINHUMAN SPUMARETROVIRUS (FOAMY 126-154 VIRUS) PPOL_GALV POL POLYPROTEINGIBBON APE LEUKEMIA VIRUS 348-378 PPOL_HTLIA POL POLYPROTEIN HUMANT-CELL LEUKEMIA VIRUS TYPE 1 657-688 (STRAIN ATK) (HTLV-1) PPOL_HTLICPOL POLYPROTEIN HUMAN T-CELL LEUKEMIA VIRUS TYPE 1 657-688 (CARIBBEANISOLATE) (HTLV-1) PPOL_HVIA2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 1 331-364 500-537 (ARV2/SF2 ISOLATE) (HIV-1) PPOL_HVIB1 POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (BH10ISOLATE) (HIV-1) PPOL_HVIB5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 343-376 512-549 (BH5 ISOLATE) (HIV-1) PPOL_HVIBR POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (BRU ISOLATE)(HIV-1) PPOL_HVIEL POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1330-363 499-536 (ELI ISOLATE) (HIV-1) PPOL_HVIH2 POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 331-364 500-537 (HXB2 ISOLATE) (HIV-1)PPOL_HVIJR POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 335-368504-541 (JRCSF ISOLATE) (HIV-1) PPOL_HVIMA POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1 330-363 (MAL ISOLATE) (HIV-1) PPOL_HVIMNPOL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-367 503-540 (MNISOLATE) (HIV-1) PPOL_HVIN5 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 331-364 500-537 (NEW YORK-5 ISOLATE) (HIV-1) PPOL_HVIND POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (NDKISOLATE) (HIV-1) PPOL_HVIOY POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 331-364 500-537 (OYI ISOLATE) (HIV-1) PPOL_HVIPV POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 343-376 512-549 (PV22 ISOLATE)(HIV-1) PPOL_HVIRH POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1330-363 499-536 (RF/HAT ISOLATE) (HIV-1) PPOL_HVIU4 POL POLYPROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1 330-363 499-536 (STRAINUGANDAN/ISOLATE PPOL_HVIZ2 POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1 330-363 499-536 (Z2/CDC-Z34 ISOLATE) (HIV-1) PPOL_HV2CA POLPOLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 353-386 (ISOLATE CAM2)(HIV-2) PPOL_HV2NZ POL POLYPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2353-386 (ISOLATE NIH-Z) (HIV-2) PPOL_HV2RO POL POLYPROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 354-387 (ISOLATE ROD) (HIV-2) PPOL_IPHAPUTATIVE POL POLYPROTEIN HAMSTER INTRACISTERNAL A-PARTICLE 460-496(IAP-H18 PPOL_JSRV POL POLYPROTEIN SHEEP PULMONARY ADENOMATOSIS VIRUS186-220 PPOL_MPMV POL POLYPROTEIN SIMIAN MASON-PFIZER VIRUS (MPMV)650-681 PPOL_OMVVS POL POLYPROTEIN OVINE LENTIVIRUS (STRAIN SA-OMVV)61-98 102-130 182-216 298-331 PPOL_RTBV POLYPROTEIN RICE TUNGROBACILLIFORM VIRUS (RTBV) 788-824 891-919 1399-1433 PPOL_RTBVPPOLYPROTEIN RICE TUNGRO BACILLIFORM VIRUS 788-824 891-919 1399-1433(ISOLATE PHILIPPINES) (RTBV) PPOL_SFV3L POL POLYPROTEIN SIMIAN FOAMYVIRUS (TYPE 3/STRAIN LK3) 337-365 (SFV-3) PPOL_SIVCE POL POLYPROTEINCHIMPANZEE IMMUNODEFICIENCY VIRUS 355-388 524-561 (SIV(CPZ)) (CIV)PPOL_SOCMV ENZYMATIC POLYPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 17-5558-89 PPOL_SRV1 POL POLYPROTEIN SIMIAN RETROVIRUS SRV-1 650-681PPOL_VILV POL POLYPROTEIN VISNA LENTIVIRUS (STRAIN 1514)  80-117 201-235317-350 PPOL_VILV1 POL POLYPROTEIN VISNA LENTIVIRUS  80-117 317-350(STRAIN 1514/CLONE LV1-1KS1) PPOL_VILV2 POL POLYPROTEIN VISNA LENTIVIRUS 80-117 201-235 317-350 (STRAIN 1514/CLONE LV1-1KS2) PPP41_HSV6GPHOSPHOPROTEIN P41 HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 60-91PPTP_NPVAC PROTEIN-TYROSINE PHOSPHATASE AUTOGRAPHA CALIFORNICA NUCLEAR53-85 POLYHEDROSIS VIRUS PREEP_CSV REPEAT ELEMENT PROTEIN CAMPOLETISSONORENSIS VIRUS (CSV) 113-149 PREV_BIV27 REV PROTEIN BOVINEIMMUNODEFICIENCY VIRUS  74-109 (ISOLATE 127) (BIV) PREV_EIAV9 REVPROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 44-79 (CLONE 1369) (EIAV)PREV_EIAVC REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS 44-79 (CLONE CL22)(EIAV) PREV_EIAVY REV PROTEIN EQUINE INFECTIOUS ANEMIA VIRUS  74-109(ISOLATE WYOMING) (EIAV) PREV_SIVAT REV PROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 25-62 (TYO-1 ISOLATE) (SIV-AGM) PRIRI_ASFM2RIBONUCLEOSIDE-DIPHOSPHATE AFRICAN SWINE FEVER VIRUS 630-666 REDUCTASELARGE CH (ISOLATE MALAWI LIL 20/1) (ASFV) PRIRI_HCMVARIBONUCLEOSIDE-DIPHOSPHATE HUMAN CYTOMEGALOVIRUS 279-311 393-430 449-477REDUCTASE LARGE CH (STRAIN AD169) PRIRI_HSVEB RIBONUCLEOSIDE-DIPHOSPHATEEQUINE HERPESVIRUS TYPE 1 60-92 503-531 REDUCTASE LARGE CH (STRAIN AB4P)(EHV-1) PRIRI_VACCC RIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAINCOPENHAGEN) 203-235 REDUCTASE LARGE CH PRIRI_VACCVRIBONUCLEOSIDE-DIPHOSPHATE VACCINIA VIRUS (STRAIN WR) 203-235 REDUCTASELARGE CH PRIRI_VARV RIBONUCLEOSIDE-DIPHOSPHATE VARIOLA VIRUS 203-235REDUCTASE LARGE CH PRIRI_VZVD RIBONUCLEOSIDE-DIPHOSPHATEVARICELLA-ZOSTER VIRUS 34-72 221-254 488-516 REDUCTASE LARGE CH (STRAINDUMAS) (VZV) PRMIL_AVEVR RMIL SERINE/THREONINE-PROTEIN KINASE AVIANROUS-ASSOCIATED VIRUS TYPE 1 149-177 TRANSFORM PRMIL_AVII1 RMILSERINE/THREONINE-PROTEIN KINASE AVIAN RETROVIRUS IC10 133-161 TRANSFORMPRP94_VACCV RNA-POLYMERASE-ASSOCIATED VACCINIA VIRUS (STRAIN WR), AND399-427 TRANSCRIPTION SPECIF VACCINIA VIRUS (STRAIN COPENHAGE PRP94_VARVRNA-POLYMERASE-ASSOCIATED VARIOLA VIRUS 399-427 TRANSCRIPTION SPECIFPRPO1_VACCV DNA-DIRECTED RNA POLYMERASE 147 KD VACCINIA VIRUS (STRAINWR) 1005-1033 POLYPEPTIDE PRPO2_CAPVK DNA-DIRECTED RNA POLYMERASE 132 KDCAPRIPOXVIRUS (STRAIN KS-1) 297-333 667-696 POLYPEPTIDE PRPO2_COWPXDNA-DIRECTED RNA POLYMERASE 132 KD COWPOX VIRUS (CPV) 202-236 542-578POLYPEPTIDE PRPO2_VACCV DNA-DIRECTED RNA POLYMERASE 132 KD VACCINIAVIRUS (STRAIN WR), AND 202-236 542-578 POLYPEPTIDE VACCINIA VIRUS(STRAIN COPENHAGE PRPO2_VARV DNA-DIRECTED RNA POLYMERASE 132 KD VARIOLAVIRUS 202-236 542-578 POLYPEPTIDE PRPO7_VACCV DNA-DIRECTED RNAPOLYMERASE 19 KD VACCINIA VIRUS (STRAIN WR), AND 38-66 POLYPEPTIDEVACCINIA VIRUS (STRAIN COPENHAGE PRPO7_VARV DNA-DIRECTED RNA POLYMERASE19 KD VARIOLA VIRUS 38-66 POLYPEPTIDE PRPO8_FOWP1 DNA-DIRECTED RNAPOLYMERASE 18 KD FOWLPOX VIRUS (STRAIN FP-1) 57-88 POLYPEPTIDEPRPOA_LEVL RNA-DIRECTED RNA POLYMERASE LELYSTAD VIRUS (LV) 1233-12683133-3163 3426-3457 PRPOL_EAV RNA-DIRECTED RNA POLYMERASE EQUINEARTERITIS VIRUS (EAV) 171-207 3041-3072 PRRP1_DHVI1 RNA-DIRECTED RNAPOLYMERASE DHORI VIRUS (STRAIN INDIAN/1313/61)  96-125 199-234 SUBUNITP1 (DHO) PRRP1_IAVI7 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS138-170 SUBUNIT P1 (STRAIN A/VICTORIA/3/75) PRRP1_INCJJ RNA-DIRECTED RNAPOLYMERASE INFLUENZA C VIRUS (STRAIN C/33/50) 564-598 SUBUNIT P1PRRP2_IAANN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 398-435484-518 SUBUNIT P2 (STRAIN A/ANN ARBOR/6/60) PRRP2_IADH2 RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/DUCK/HOKKAIDO/8/80) PRRP2_IAFPR RNA-DIRECTED RNA POLYMERASE INFLUENZAA VIRUS (STRAIN A/FOWL 484-518 SUBUNIT P2 PLAGUE VIRUS/ROSTOCK/34)PRRP2_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518SUBUNIT P2 (STRAIN A/GULL/MARYLAND/704/77) PRRP2_IAHLO RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/EQUINE/LONDON/1416/73) PRRP2_IAHTE RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAIN A/EQUINE/TENNESSEE/5/86)PRRP2_IAKOR RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518SUBUNIT P2 (STRAIN A/KOREA/426/68) PRRP2_IALE1 RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/LENINGRAD/134/57) PRRP2_IALE2 RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 484-518 SUBUNIT P2 (STRAIN A/LENINGRAD/134/17/57) PRRP2_IAMANRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/MALLARD/NEW YORK/6750/78) PRRP2_IANT6 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS (STRAIN A/NT/60/68) 484-518 SUBUNIT P2 PRRP2_IAPI0RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/PINTAIL/ALBERTA/119/79) PRRP2_IAPUE RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAIN A/PUERTO RICO/8/34)PRRP2_IARUD RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS (STRAINA/RUDDY 484-518 SUBUNIT P2 TURNSTONE/NEW JERSEY/47/85) PRRP2_IASINRNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/SINGAPORE/1/57) PRRP2_IATKM RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 484-518 SUBUNIT P2 (STRAIN A/TURKEY/MINNESOTA/833/80) PRRP2_IAVI7RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/VICTORIA/3/75) PRRP2_IAWIL RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS 484-518 SUBUNIT P2 (STRAIN A/WILSON-SMITH/33) PRRP2_IAZH2RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/SWINE/HONG KONG/81/78) PRRP2_IAZH3 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAIN A/SWINE/HONG KONG/126/82)PRRP2_IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 484-518SUBUNIT P2 (STRAIN A/SWINE/IOWA/15/30) PRRP2_IAZTF RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 484-518 SUBUNIT P2 (STRAINA/SWINE/TENNESSEE/26/77) PRRP3_IABUD RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 515-553 585-613 SUBUNIT P3 (STRAINA/BUDGERIGAR/HOKKAIDO/1/77) PRRP3_IAFPR RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS (STRAIN A/FOWL 585-613 SUBUNIT P3 PLAGUEVIRUS/ROSTOCK/34) PRRP3_IAFPW RNA-DIRECTED RNA POLYMERASE INFLUENZA AVIRUS (STRAIN A/FOWL 579-613 SUBUNIT P3 PLAGUE VIRUS/WEYBRIDGE)PRRP3_IAGU2 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 585-613SUBUNIT P3 (STRAIN A/GULL/MARYLAND/704/77) PRRP3_IAGUA RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 585-613 SUBUNIT P3 (STRAINA/GULL/ASTRAKHAN/227/84) PRRP3_IAHPR RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 585-613 SUBUNIT P3 (STRAIN A/EQUINE/PRAGUE/1/56)PRRP3_IAMAN RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 585-613SUBUNIT P3 (STRAIN A/MALLARD/NEW YORK/6750/78) PRRP3_IARUD RNA-DIRECTEDRNA POLYMERASE INFLUENZA A VIRUS (STRAIN A/RUDDY 585-613 SUBUNIT P3TURNSTONE/NEW JERSEY/47/85) PRRP3_IASE2 RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 585-613 SUBUNIT P3 (STRAINA/SEAL/MASSACHUSETTS/133/82) PRRP3_IATKM RNA-DIRECTED RNA POLYMERASEINFLUENZA A VIRUS 585-613 SUBUNIT P3 (STRAIN A/TURKEY/MINNESOTA/833/80)PRRP3_IAZI1 RNA-DIRECTED RNA POLYMERASE INFLUENZA A VIRUS 585-613SUBUNIT P3 (STRAIN A/SWINE/IOWA/15/30) PRRP3_IAZTE RNA-DIRECTED RNAPOLYMERASE INFLUENZA A VIRUS 585-613 SUBUNIT P3 (STRAINA/SWINE/TENNESSEE/24/77) PRRP3_INBAC RNA-DIRECTED RNA POLYMERASEINFLUENZA B VIRUS (STRAIN B/ANN 735-769 SUBUNIT P3ARBOR/1/66[COLD-ADAPTED]) PRRP3_INSAD RNA-DIRECTED RNA POLYMERASEINFLUENZA B VIRUS (STRAIN B/ANN 735-769 SUBUNIT P3ARBOR/1/66[WILD-TYPE]) PRRP3_INCBE RNA-DIRECTED RNA POLYMERASE INFLUENZAC VIRUS (STRAIN C/BERLIN/1/85) 609-641 SUBUNIT P3 PRRP3_INCJJRNA-DIRECTED RNA POLYMERASE INFLUENZA C VIRUS (STRAIN C/JJ/50) 609-641SUBUNIT P3 PRRP3_THOGV RNA-DIRECTED RNA POLYMERASE THOGOTO VIRUS (THO)109-145 324-356 SUBUNIT P3 PRRPA_CVH22 RNA-DIRECTED RNA POLYMERASE HUMANCORONAVIRUS (STRAIN 229E) 410-443 712-745 1262-1295 1963-1999 2078-21122474-2508 3153-3191 PRRPA_CVMJH RNA-DIRECTED RNA POLYMERASE MURINECORONAVIRUS MHV (STRAIN JHM) 708-740 3544-3577 3757-3785 3933-3961PRRPB_BEV RNA-DIRECTED RNA POLYMERASE BERNE VIRUS (BEV) 941-9692137-2169 2178-2206 PRRPB_CVMA5 RNA-DIRECTED RNA POLYMERASE MURINECORONAVIRUS MHV (STRAIN A59) 346-380 684-714 1689-1722 2698-2730PRRPB_CVMJH RNA-DIRECTED RNA POLYMERASE MURINE CORONAVIRUS MHV (STRAINJHM) 346-380 684-714 1687-1720 2356-2391 2696-2728 PRRPB_CVPFSRNA-DIRECTED RNA POLYMERASE PORCINE TRANSMISSIBLE 173-207 322-350482-515 GASTROENTERITIS CORONAVIRUS PRRPB_CVPR8 RNA-DIRECTED RNAPOLYMERASE PORCINE RESPIRATORY CORONAVIRUS  80-113 PRRPB_IBVBRNA-DIRECTED RNA POLYMERASE AVIAN INFECTIOUS BRONCHITIS VIRUS 636-670(STRAIN BEAUDETTE) (IBV) PRRPL_BUNYW RNA POLYMERASE BUNYAMWERA VIRUS303-331 1096-1128 PRRPL_HANTV RNA POLYMERASE HANTAAN VIRUS (STRAIN76-118) (KOREAN 1938-1971 HEMORRHAGIC FEVER VIRUS) PRRPL_HRSVA RNAPOLYMERASE BETA SUBUNIT HUMAN RESPIRATORY SYNCYTIAL VIRUS 892-9221181-1213 (STRAIN A2) PRRPL_MABVM RNA-DIRECTED RNA POLYMERASE MARBURGVIRUS (STRAIN MUSOKE) 144-176 698-736 1042-1074 1797-1832 PRRPL_MABVPRNA-DIRECTED RNA POLYMERASE MARBURG VIRUS (STRAIN POPP) 144-176 698-7361042-1074 2223-2253 PRRPL_MEASE RNA POLYMERASE BETA SUBUNIT MEASLESVIRUS (STRAIN EDMONSTON) 193-227 647-683 788-825 1160-1192 1886-1914PRRPL_MUMPM RNA POLYMERASE BETA SUBUNIT MUMPS VIRUS (STRAIN MIYAHARA1882-1913 VACCINE) PRRPL_NDVB RNA POLYMERASE BETA SUBUNIT NEWCASTLEDISEASE VIRUS (STRAIN 626-661 1571-1603 BEAUDETTE C/45) (NDV)PRRPL_PI2HT RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS(STRAIN 268-305 558-595 654-688 1562-1599 1881-1912 2025-2053 TOSHIBA)(PIV-2) PRRPL_PI3H4 RNA POLYMERASE BETA SUBUNIT HUMAN PARAINFLUENZA 3VIRUS (STRAIN 41-76 735-764 784-814 2111-2139 NIH 47885) PRRPL_RABVP RNAPOLYMERASE BETA SUBUNIT RABIES VIRUS (STRAIN PV) 60-90 804-837 1365-13941930-1962 PRRPL_RABVS RNA POLYMERASE BETA SUBUNIT RABIES VIRUS (STRAINSAD B19) 60-90 804-837 1365-1394 1930-1962 PRRPL_RDV RNA-DIRECTED RNAPOLYMERASE RICE DWARF VIRUS (RDV) 1293-1323 PRRPL_RVFVZ RNA-DIRECTED RNAPOLYMERASE RIFT VALLEY FEVER VIRUS (STRAIN 1018-1055 2009-2044 ZH-548M12) (RVFV) PRRPL_SEND5 RNA POLYMERSE BETA SUBUNIT SENDAI VIRUS (STRAINZ/HOST MUTANTS) 194-231 233-269 735-764 784-814 2140-2177 PRRPL_SENDERNA POLYMERSE BETA SUBUNIT SENDAI VIRUS (STRAIN ENDERS) 14-51 53-89555-584 1927-1955 1960-1997 PRRPL_SENDZ RNA POLYMERSE BETA SUBUNITSENDAI VIRUS (STRAIN Z) 194-231 233-269 735-764 784-814 2140-2177PRRPL_SEOU8 RNA-DIRECTED RNA POLYMERASE SEOUL VIRUS (STRAIN 80-39)394-431 1938-1971 2081-2119 PRRPL_SV5WR RNA POLYMERSE BETA SUBUNITSIMIAN VIRUS 5 (STRAIN 21004-WR) (SV5) 557-594 1094-1122 2020-2051PRRPL_SYNV RNA POLYMERSE BETA SUBUNIT SONCHUS YELLOW NET VIRUS (SYNV)126-164 605-634 820-856 918-951 1484-1517 PRRPL_TSWVB RNA-DIRECTED RNAPOLYMERASE TOMATO SPOTTED WILT VIRUS (BRAZILIAN 43-79 843-880 2266-22982369-2403 2481-2511 2805-2840 ISOLATE CPNH1/BR-01) (TSWV) PRRPL_UUK RNAPOLYMERASE UUKUNIEMI VIRUS (UUK) 1017-1051 1147-1177 1293-1321 2060-2095PRRPL_VSVJH RNA POLYMERSE BETA SUBUNIT VESICULAR STOMATITIS VIRUS209-246 312-349 1011-1039 1662-1697 1956-1989 PRRPL_VSVJO RNA POLYMERSEBETA SUBUNIT VESICULAR STOMATITIS VIRUS 1011-1039 1956-1989 PRRPL_VSVSJRNA POLYMERSE BETA SUBUNIT VESICULAR STOMATITIS VIRUS (STRAIN 138-171209-246 312-349 961-999 1011-1039 1739-1772 2051-2087 SAN JUAN)PRRPO_BWYVF PUTATIVE RNA-DIRECTED RNA BEET WESTERN YELLOWS VIRUS(ISOLATE 346-374 POLYMERASE FL-1) (BWYV) PRRPO_BYDVI PUTATIVERNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS (ISOLATE 722-755 POLYMERASEMAV-PSI) (BYDV) PRRPO_BYDVP PUTATIVE RNA-DIRECTED RNA BARLEY YELLOWDWARF VIRUS (ISOLATE 722-755 POLYMERASE PAV) (BYDV) PRRPO_BYDVR PUTATIVERNA-DIRECTED RNA BARLEY YELLOW DWARF VIRUS (ISOLATE 722-755 POLYMERASEP-PAV) (BYDV) PRRPO_CARMV PROBABLE RNA-DIRECTED RNA CARNATION MOTTLEVIRUS (CARMV)  4-37 POLYMERASE PRRPO_CGMVS PUTATIVE RNA-DIRECTED RNACUCUMBER GREEN MOTTLE MOSAIC VIRUS 443-481 725-755 1095-1132 1565-1597POLYMERASE (WATERMELON STRAIN S14) PRRPO_CNV PROBABLE RNA-DIRECTED RNACUCUMBER NECROSIS VIRUS (CNV) 470-501 POLYMERASE PRRPO_CRM PROBABLERNA-DIRECTED RNA CYMBIDIUM RINGSPOT VIRUS 28-62 267-300 470-501POLYMERASE PRRPO_IBDV5 PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSALDISEASE VIRUS 186-218 274-302 POLYMERASE (STRAIN 52/70) (IBDV)PRRPO_IBDVA PUTATIVE RNA-DIRECTED RNA AVIAN INFECTIOUS BURSAL DISEASEVIRUS 260-288 511-543 599-627 POLYMERASE PRRPO_IPNVJ PUTATIVERNA-DIRECTED RNA INFECTIOUS PANCREATIC NECROSIS VIRUS 360-390 749-778POLYMERASE (SEROTYPE JASPER) PRRPO_IPNVS PUTATIVE RNA-DIRECTED RNAINFECTIOUS PANCREATIC NECROSIS VIRUS 360-390 749-778 POLYMERASE(SEROTYPE SP) (IPNV) PRRPO_LYCVA RNA POLYMERASE LYMPHOCYTICCHORIOMENINGITIS VIRUS 109-137 263-291 2077-2106 (STRAIN ARMSTRONG)PRRPO_LYCVW RNA POLYMERASE LYMPHOCYTIC CHORIOMENINGITIS VIRUS 109-137(STRAIN WE) PRRPO_MCMV PROBABLE RNA-DIRECTED RNA MAIZE CHLOROTIC MOTTLEVIRUS (MCMV) 16-48 53-81 POLYMERASE PRRPO_PLRV1 PUTATIVE RNA-DIRECTEDRNA POTATO LEAFROLL VIRUS (STRAIN 1) (PLRV 576-607 POLYMERASEPRRPO_PLRVW PUTATIVE RNA-DIRECTED RNA POTATO LEAFROLL VIRUS (STRAIN576-607 POLYMERASE WAGENINGEN) (PLRV) PRRPO_PPMVS PUTATIVE RNA-DIRECTEDRNA PEPPER MILD MOTTLE VIRUS (STRAIN 375-407 702-730 859-891 1069-11061533-1565 POLYMERASE SPAIN) (PPMV) PRRPO_RCNMV PUTATIVE RNA-DIRECTED RNARED CLOVER NECROTIC MOSAIC VIRUS 278-314 320-353 POLYMERASE (RCNMV)PRRPO_REOVJ RNA-DIRECTED RNA REOVIRUS (TYPE 2/STRAIN D5/JONES) 284-315POLYMERASE PRRPO_ROTBR RNA-DIRECTED RNA BOVINE ROTAVIRUS (STRAIN RF)25-60 200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_ROTBU RNA-DIRECTEDRNA BOVINE ROTAVIRUS (STRAIN UK) 200-231 247-276 POLYMERASE SUBUNIT VPIPRRPO_ROTPG RNA-DIRECTED RNA PORCINE ROTAVIRUS (STRAIN GOTTFRIED)200-231 247-276 POLYMERASE SUBUNIT VPI PRRPO_ROTS1 RNA-DIRECTED RNASIMIAN II ROTAVIRUS (STRAIN SA11) 25-60 200-231 247-276 POLYMERASESUBUNIT VPI PRRPO_TACV RNA POLYMERASE TACARIBE VIRUS 17-52 109-1382078-2112 PRRPO_TBSVC PROBABLE RNA-DIRECTED RNA TOMATO BUSHY STUNT VIRUS(STRAIN 470-501 POLYMERASE CHERRY) (TBSV) PRRPO_TCV PROBABLERNA-DIRECTED RNA TURNIP CRINKLE VIRUS (TCV) 280-318 POLYMERASEPRRPO_TMGMV PUTATIVE RNA-DIRECTED RNA TOBACCO MILD GREEN MOSAIC VIRUS67-97 128-159 209-244 376-406 450-483 855-887 1527-1559 POLYMERASE (TMVSTRAIN U2) PRRPO_TMV PUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS(VULGARE) (TMV) 128-159 376-406 700-728 1533-1565 POLYMERASE PRRPO_TMVKRPUTATIVE RNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN 128-159 376-406700-728 1533-1565 POLYMERASE KOREAN) (TMV) PRRPO_TMVTO PUTATIVERNA-DIRECTED RNA TOBACCO MOSAIC VIRUS (STRAIN 128-159 376-406 700-728857-889 1533-1565 POLYMERASE TOMATO/L) (TMV) PRRPO_TNVA RNA-DIRECTED RNAPOLYMERASE TOBACCO NECROSIS VIRUS (STRAIN 231-263 A) (TNV) PRRPO_TNVDRNA-DIRECTED RNA POLYMERASE TOBACCO NECROSIS VIRUS (STRAIN  5-40 234-270D) (TNV) PRRPP_CDVO RNA POLYMERASE ALPHA SUBUNIT CANINE DISTEMPER VIRUS(STRAIN 295-332 ONDERSTEPOORT) (CDV) PRRPP_MEASE RNA POLYMERASE ALPHASUBUNIT MEASLES VIRUS (STRAIN EDMONSTON) 295-332 PRRPP_MEAS1 RNAPOLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAIN IP-3-CA) 295-332PRRPP_MEASY RNA POLYMERASE ALPHA SUBUNIT MEASLES VIRUS (STRAINYAMAGATA-1) 295-332 PRRPP_MUMP1 RNA POLYMERASE ALPHA SUBUNIT MUMPS VIRUS(STRAIN SBL-1) 211-248 PRRPP_MUMPE RNA POLYMERASE ALPHA SUBUNIT MUMPSVIRUS (STRAIN ENDERS) 212-249 PRRPP_MUMPM RNA POLYMERASE ALPHA SUBUNITMUMPS VIRUS (STRAIN MIYAHARA 212-249 VACCINE) PRRPP_NDVA RNA POLYMERASEALPHA SUBUNIT NEWCASTLE DISEASE VIRUS (STRAIN 220-255AUSTRALIA-VICTORIA/32) (NDV) PRRPP_NDVB RNA POLYMERASE ALPHA SUBUNITNEWCASTLE DISEASE VIRUS (STRAIN 220-255 BEAUDETTE C/45) (NDV) PRRPP_P12HRNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS (PIV-2 216-253PRRPP_P12HT RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 2 VIRUS(STRAIN 216-253 TOSHIBA) (PIV-2) PRRPP_P14HA RNA POLYMERASE ALPHASUBUNIT HUMAN PARAINFLUENZA 4A VIRUS (STRAIN 220-257 332-364 TOSHIBA)(PIV-4A) PRRPP_P14HB RNA POLYMERASE ALPHA SUBUNIT HUMAN PARAINFLUENZA 4BVIRUS (STRAIN 220-257 332-364 68-333) (PIV-4B) PRRPP_PIRYV RNAPOLYMERASE ALPHA SUBUNIT PIRY VIRUS 134-168 PRRPP_RABVA RNA POLYMERASEALPHA SUBUNIT RABIES VIRUS (STRAIN AVO1) 216-244 PRRPP_RABVC RNAPOLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN CVS-11) 216-244PRRPP_RABVE RNA POLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN ERA), ANDRABIES 216-244 VIRUS (STRAIN PM) PRRPP_RABVP RNA POLYMERASE ALPHASUBUNIT RABIES VIRUS (STRAIN PV)  89-122 216-244 PRRPP_RABVS RNAPOLYMERASE ALPHA SUBUNIT RABIES VIRUS (STRAIN SAD B19) 216-244PRRPP_SEND5 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS (STRAIN Z/HOSTMUTANTS) 530-566 PRRPP_SEND6 RNA POLYMERASE ALPHA SUBUNIT SENDAI VIRUS(STRAIN 6/94) 530-566 PRRPP_SENDF RNA POLYMERASE ALPHA SUBUNIT SENDAIVIRUS (STRAIN FUSHIMI) 530-566 PRRPP_SENDH RNA POLYMERASE ALPHA SUBUNITSENDAI VIRUS (STRAIN HARRIS) 530-566 PRRPP_SENDZ RNA POLYMERASE ALPHASUBUNIT SENDAI VIRUS (STRAIN Z) 530-566 PRRPP_SV5 RNA POLYMERASE ALPHASUBUNIT SIMIAN VIRUS 5 (STRAIN W3) (SV5) 199-236 PRRPP_VSVJM RNAPOLYMERASE ALPHA SUBUNIT VESICULAR STOMATITIS VIRUS (SEROTYPE 198-230NEW JERSEY/STRAIN MISSOUR PRRPP_VSVJO RNA POLYMERASE ALPHA SUBUNITVESICULAR STOMATITIS VIRUS (SEROTYPE 197-230 NEW JERSEY/STRAIN OGDEN)PSODC_VACCC SUPEROXIDE DISMUTASE LIKE PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 19-55 PSODC_VACCV SUPEROXIDE DISMUTASE LIKE PROTEIN VACCINIAVIRUS (STRAIN WR) 19-55 PSODC_VARV SUPEROXIDE DISMUTASE LIKE PROTEINVARIOLA VIRUS 19-55 PSPHR_AMEPV SPHEROIDIN AMSACTA MOOREI ENTOMOPOXVIRUS58-86 138-172 627-659 671-701 (AMEPV) PSPI1_MYXVL SERPIN 1 MYXOMA VIRUS(STRAIN LAUSANNE) 167-200 PSPI3_VACCC SERINE PROTEINASE INHIBITOR 3VACCINIA VIRUS (STRAIN COPENHAGEN) 112-140 PSPI3_VACCV SERINE PROTEINASEINHIBITOR 3 VACCINIA VIRUS (STRAIN WR) 112-140 PSPI3_VARV SERINEPROTEINASE INHIBITOR 1 VARIOLA VIRUS 116-144 PIAG8_FOWPV TRANS-ACTIVATORPROTEIN FP0 FOWLPOX VIRUS 199-230 PTALA_BFDV LARGE T ANTIGEN BUDDERIGARFLEDGLING DISEASE VIRUS  99-129 172-210 461-491 (BFDV) PTAMI_POVHAMIDDLE T ANTIGEN HAMSTER POLYOMAVIRUS 106-138 PTAMI_POVM3 MIDDLE TANTIGEN MOUSE POLYOMAVIRUS (STRAIN 3) 43-80 PTAMI_POVMA MIDDLE T ANTIGENMOUSE POLYOMAVIRUS (STRAIN A2) 43-80 PTAMI_POVMC MIDDLE T ANTIGEN MOUSEPOLYOMAVIRUS (STRAIN 43-80 CRAWFORD SMALL-PLAQUE) PTASM_POVBA SMALL TANTIGEN POLYOMAVIRUS BK (STRAIN AS) 130-162 PTASM_POVBK SMALL T ANTIGENPOLYOMAVIRUS BK 130-162 PTASM_POVHA SMALL T ANTIGEN HAMSTER POLYOMAVIRUS106-138 PTASM_POVMA SMALL T ANTIGEN MOUSE POLYOMAVIRUS (STRAIN A2) 43-80PTASM_SV40 SMALL T ANTIGEN SIMIAN VIRUS 40 (SV40) 132-164 PTEGU_EBVLARGE TEGUMENT PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 143-1731469-1503 1791-1819 3102-3137 (HUMAN HERPESVIRUS 4) PTEGU_HCMVA PROBABLELARGE TEGUMENT PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 161-192 699-736812-840 2199-2228 AD169) PTEGU_HSV6G LARGE TEGUMENT PROTEIN HERPESSIMPLEX VIRUS (TYPE 6/STRAIN GS) 222-259 566-601 615-643 1436-14692037-2072 PTEGU_HSVEB LARGE TEGUMENT PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN 265-297 569-589 1072-1106 3363-3392 AB4P) (EHV-1) PTEGU_HSVSAPROBABLE LARGE TEGUMENT PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 467-505714-751 823-861 926-960 1503-1536 2421-2457 PTERM_ADE07 DNA TERMINALPROTEIN HUMAN ADENOVIRUS TYPE 7 369-400 PTMAF_AVIS4 TRANSFORMING PROTEINMAF AVIAN MUSCULOAPONEUROTIC 230-267 FIBROSARCOMA VIRUS AS42 PTOP2_ASFB7DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS (STRAIN 119-153 1105-1142BA71V) (ASFV) PTOP2_ASFM2 DNA TOPOISOMERASE II AFRICAN SWINE FEVER VIRUS(ISOLATE 119-153 1104-1141 MALAWILIL 20/1) (ASFV) PTREL_AVIRE RELTRANSFORMING PROTEIN AVIAN RETICULOENDOTHELIOSIS VIRUS 189-226PTYSY_VZVD THYMIDYLATE SYNTHASE VARICELLA-ZOSTER VIRUS (STRAIN 121-156DUMAS) (VZV) PUIL_HSV6U PROTEIN IL HERPES SIMPLEX VIRUS (TYPE 6/STRAIN171-203 UGANDA-1102) PUDPE_NPVAC ECDYSTEROID UDP- AUTOGRAPHA CALIFORNICANUCLEAR 185-219 387-425 452-484 GLUCOSYLTRANSFERASE PRECURSOPOLYHEDROSIS VIRUS (ACMNPV) PUL02_HCMVA HYPOTHETICAL PROTEIN UL2 HUMANCYTOMEGALOVIRUS (STRAIN 25-59 AD169) PUL06_EBV VIRION PROTEIN BDRF1EPSTEIN-BARR VIRUS (STRAIN B95-8) 355-386 (HUMAN HERPESVIRUS 4)PUL06_HSVI1 VIRION PROTEIN UL6 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)404-436 PUL06_HSVEB VIRION GENE 56 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN 222-251 437-475 AB4P) (EHV-1) PUL06_HSVSA VIRION GENE 43 PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 299-330 PUL06_VZVD VIRION GENE 54PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN 223-252 502-530 DUMAS) (VZV)PUL07_HCMVA HYPOTHETICAL PROTEIN UL7 HUMAN CYTOMEGALOVIRUS (STRAIN186-216 AD169) PUL07_HSVEB GENE 55 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN Nov-39 AB4P) (EHV-1) PUL08_HCMVA HYPOTHETICAL PROTEIN UL8 HUMANCYTOMEGALOVIRUS (STRAIN AD169) 65-96 PUL08_HSVI1 PROTEIN UL8 HERPESSIMPLEX VIRUS (TYPE 1/STRAIN 17) 614-648 PUL08_VZVD GENE 52 PROTEINVARICELLA-ZOSTER VIRUS (STRAIN 227-255 DUMAS) (VZV) PUL09_HSVI1 ORIGINOF REPLICATION BINDING PROTEIN HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17)678-713 PUL09_VZVD ORIGIN OF REPLICATION BINDING PROTEINVARICELLA-ZOSTER VIRUS (STRAIN 168-204 DUMAS) (VZV) PUL14_PRVN3 UL14PROTEIN HOMOLOG PSEUDORABIES VIRUS (STRAIN NIA-3) (PRV) 40-76PUL16_HSVI1 PROTEIN UL16 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 22-52PUL17_HSV6U PROTEIN 10R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 302-339UGANDA-1102) PUL21_HSVEB GENE 40 PROTEIN EQUINE HERPESVIRUS TYPE 1(STRAIN 294-328 AB4P) (EHV-1) PUL21_PRVN3 PROTEIN UL21 HOMOLOGPSEUDORABIES VIRUS (STRAIN NIA-3) (PRV) 242-271 PUL21_VZVD GENE 38PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN 56-92 375-412 DUMAS) (VZV)PUL24_HCMVA HYPOTHETICAL PROTEIN UL24 HUMAN CYTOMEGALOVIRUS (STRAIN52-87 AD169) PUL24_ILTVT PROTEIN UL24 HOMOLOG INFECTIOUSLARYNGOTRACHEITIS VIRUS 158-196 (STRAIN THORNE V882) PUL25_HSVEB VIRIONPROTEIN UL25 EQUINE HERPESVIRUS TYPE 1 (STRAIN 343-379 AB4P) (EHV-1)PUL25_HSVSA VIRION GENE 19 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)290-323 PUL25_VZVD VIRION GENE 34 PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN540-571 DUMAS) (VZV) PUL28_HCMVA HYPOTHETICAL PROTEIN UL28 HUMANCYTOMEGALOVIRUS (STRAIN 287-316 AD169) PUL31_HCMVA HYPOTHETICAL PROTEINUL31 HUMAN CYTOMEGALOVIRUS (STRAIN 464-501 AD169) PUL31_HSVA GENE 69PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 163-197 PUL32_EBV PROBABLE MAJORENVELOPE EPSTEIN-BARR VIRUS (STRAIN B95-8) 367-405 GLYCOPROTEIN BFLF1(HUMAN HERPESVIRUS 4) PUL32_HSVI1 PROBABLE MAJOR ENVELOPE HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 404-438 564-592 GLYCOPROTEIN UL32 PUL32_HSVEBMAJOR ENVELOPE GLYCOPROTEIN 300 EQUINE HERPESVIRUS TYPE 1  81-115PUL32_HSVSA PROBABLE MAJOR ENVELOPE HERPESVIRUS SAIMIRI (STRAIN 11)276-307 GLYCOPROTEIN 68 PUL32_VZVD PROBABLE MAJOR ENVELOPEVARICELLA-ZOSTER VIRUS (STRAIN 553-581 GLYCOPROTEIN 26 DUMAS) (VZV)PUL34_HSVSA GENE 67 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)  98-130PUL35_HCMVA HYPOTHETICAL PROTEIN UL35 HUMAN CYTOMEGALOVIRUS (STRAIN138-169 AD169) PUL36_HCMVA HYPOTHETICAL PROTEIN UL36 HUMANCYTOMEGALOVIRUS (STRAIN 186-223 AD169) PUL37_EBV PROTEIN BOLF1EPSTEIN-BARR VIRUS (STRAIN B95-8)  85-123 (HUMAN HERPESVIRUS 4)PUL37_HSVEB GENE 23 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 702-732778-812 AB4P) (EHV-1) PUL37_HSVSA GENE 63 PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 566-602 PUL37_VZVD GENE 21 PROTEIN VARICELLA-ZOSTER VIRUS(STRAIN 598-629 706-736 776-806 DUMAS) (VZV) PUL38_HCMVA HYPOTHETICALPROTEIN UL38 HUMAN CYTOMEGALOVIRUS (STRAIN 157-188 AD169) PUL41_VZVDHOST SHUTOFF VIRION PROTEIN VARICELLA-ZOSTER VIRUS (STRAIN 274-307DUMAS) (VZV) PUL43_HSVI1 MEMBRANE PROTEIN UL43 HERPES SIMPLEX VIRUS(TYPE 1/STRAIN 17) 41-70 PUL45_HSVI1 GENE 15 MEMBRANE PROTEINVARICELLA-ZOSTER VIRUS (STRAIN 34-64 277-308 DUMAS) (VZV) PUL47_HCMVAPROTEIN UL47 HUMAN CYTOMEGALOVIRUS (STRAIN 438-471 741-777 AD169)PUL47_HSVE4 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINE HERPESVIRUS TYPE 4580-615 PUL47_HSVEB 97 KD ALPHA TRANS-INDUCING PROTEIN EQUINEHERPESVIRUS TYPE 1 (STRAIN 587-622 AB4P) (EHV-1) PUL49_HSVI1 TEGUMENTPROTEIN UL49 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17 226-259 PUL49_HSVBPTEGUMENT PROTEIN UL49 HOMOLOG BOVINE HERPESVIRUS TYPE 1 (STRAIN P8-2)135-168 PUL52_EBV PROBABLE DNA REPLICATION PROTEIN EPSTEIN-BARR VIRUS(STRAIN B95-8) 582-617 BSLF1 (HUMAN HERPESVIRUS 4) PUL52_HSVI1 DNAREPLICATION PROTEIN UL52 HERPES SIMPLEX VIRUS (TYPE 1/STRAIN 17) 599-629771-805 PUL52_HSVEB DNA REPLICATION PROTEIN UL52 EQUNE HERPESVIRUS TYPE1 (STRAIN 316-344 580-618 912-947 AB4P) (EHV-1) PUL52_HSVSA PROBABLE DNAREPLICATION GENE 56 HERPESVIRUS SAIMIRI (STRAIN 11) 229-267 374-411PROTEIN PUL53_HCMVA PROTEIN UL53 HUMAN CYTOMEGALOVIRUS (STRAIN 213-248AD169) PUL53_HSV6U UL53 PROTEIN HOMOLOG HERPES SIMPLEX VIRUS (TYPE6/STRAIN 105-139 UGANDA-1102) PUL60_HCMVA HYPOTHETICAL PROTEIN UL60HUMAN CYTOMEGALOVIRUS (STRAIN 120-148 AD169 PUL70_HCMVA PROBABLEREPLICATION PROTEIN UL70 HUMAN CYTOMEGALOVIRUS (STRAIN 36-65 626-664AD169) PUL77_HCMVA VIRION PROTEIN UL77 HUMAN CYTOMEGALOVIRUS (STRAIN381-413 565-598 AD169) PUL78_HCMVA HYPOTHETICAL PROTEIN UL78 HUMANCYTOMEGALOVIRUS (STRAIN 262-290 303-341 AD169) PUL79_HSVSA HYPOTHETICALGENE 18 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 158-195 PUL87_HSV6UHYPOTHETICAL PROTEIN 5R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 130-159UGANDA-1102) PUL87_HSVSA HYPOTHETICAL GENE 24 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11) 322-355 PUL88_HCMVA HYPOTHETICAL PROTEIN UL88 HUMANCYTOMEGALOVIRUS (STRAIN 309-337 AD169) PUL88_HSV6U HYPOTHETICAL PROTEIN6R HERPES SIMPLEX VIRUS (TYPE 6/STRAIN 150-187 238-272 UGANDA-1102)PUL91_HSVSA HYPOTHETICAL GENE 30 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)23-53 PUL92_EBV HYPOTHETICAL PROTEIN BDLF4 EPSTEIN-BARR VIRUS (STRAINB95-8) 106-144 (HUMAN HERPESVIRUS 4) PUL92_HSVSA HYPOTHETICAL GENE 31PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 123-157 PUL93_HCMVA PROTEIN UL93HUMAN CYTOMEGALOVIRUS (STRAIN 387-420 AD169) PUL95_EBV HYPOTHETICALPROTEIN BGLF3 EPSTEIN-BARR VIRUS (STRAIN B95-8) 111-145 (HUMANHERPESVIRUS 4) PULB8_HCMVA HYPOTHETICAL PROTEIN UL118 HUMANCYTOMEGALOVIRUS (STRAIN 102-130 152-181 AD169 PULC1_HCMVA HYPOTHETICALPROTEIN UL121 HUMAN CYTOMEGALOVIRUS (STRAIN 129-165 AD169) PULC8_HCMVAHYPOTHETICAL PROTEIN UL128 HUMAN CYTOMEGALOVIRUS (STRAIN 64-96 AD169)PULC9_HCMVA HYPOTHETICAL PROTEIN UL129 HUMAN CYTOMEGALOVIRUS (STRAIN66-99 AD169) PULD0_HCMVA HYPOTHETICAL PROTEIN UL130 HUMANCYTOMEGALOVIRUS (STRAIN  81-114 AD169) PUNG_EBV URACIL-DNA GLYCOSYLASEEPSTEIN-BARR VIRUS (STRAIN B95-8) 159-189 (HUMAN HERPESVIRUS 4)PUNG_VACCC URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN COPENHAGEN) 82-117 PUNG_VACCV URACIL-DNA GLYCOSYLASE VACCINIA VIRUS (STRAIN WR) 82-117 PUNG_VARV URACIL-DNA GLYCOSYLASE VARIOLA VIRUS  82-117PUS02_HCMVA HYPOTHETICAL PROTEIN HQLF2 HUMAN CYTOMEGALOVIRUS (STRAIN43-73 AD169) PUS07_HCMVA HYPOTHETICAL PROTEIN HXLF5 HUMANCYTOMEGALOVIRUS (STRAIN 153-190 AD169) PUS09_HCMVA HYPOTHETICAL PROTEINHXLF3 HUMAN CYTOMEGALOVIRUS (STRAIN 179-213 AD169) PUS10_HCMVAHYPOTHETICAL PROTEIN HXLF2 HUMAN CYTOMEGALOVIRUS (STRAIN 137-170 AD169)PUS12_HCMVA HYPOTHETICAL PROTEIN HVLF6 HUMAN CYTOMEGALOVIRUS (STRAIN29-67 113-142 AD169) PUS13_HCMVA HYPOTHETICAL PROTEIN HVLF5 HUMANCYTOMEGALOVIRUS (STRAIN 11-45 AD169) PUS15_HCMVA HYPOTHETICAL PROTEINHVLF3 HUMAN CYTOMEGALOVIRUS (STRAIN 343-375 AD169) PUS16_HCMVAHYPOTHETICAL PROTEIN HVLF2 HUMAN CYTOMEGALOVIRUS (STRAIN 151-188 243-274AD169) PUS18_HCMVA MEMBRANE PROTEIN HWLF5 HUMAN CYTOMEGALOVIRUS (STRAIN185-222 AD169) PUS22_HCMVA EARLY NUCLEAR PROTEIN HWLF1 HUMANCYTOMEGALOVIRUS (STRAIN 270-299 AD169) PUS26_HCMVA HYPOTHETICAL PROTEINHHLF5 HUMAN CYTOMEGALOVIRUS (STRAIN 132-164 AD169) PUS27_HCMVA G-PROTEINCOUPLED RECEPTOR HUMAN CYTOMEGALOVIRUS (STRAIN 247-285 HOMOLOG US27AD169) PUS29_HCMVA HYPOTHETICAL PROTEIN HHRF4 HUMAN CYTOMEGALOVIRUS(STRAIN 246-276 AD169) PUS30_HCMVA HYPOTHETICAL PROTEIN HHRF5 HUMANCYTOMEGALOVIRUS (STRAIN 208-246 AD169) PV125_AMVLE 125 KD PROTEINALFALFA MOSAIC VIRUS (STRAIN 263-292 425/ISOLATE LEIDEN PV13K_TRVPL 16KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN PLB) 24-62 PV143_NPVAC HELICASEAUTOGRAPHA CALIFORNICA NUCLEAR 312-342 POLYHEDROSIS VIRUS PV17K_BSMV 17KD PROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 40-75 PV1A_CMVFN 1A PROTEINCUCUMBER MOSAIC VIRUS (STRAIN FNY) 674-709 (CMV) PV270_ASFB7 L270PROTEIN AFRICAN SWINE FEVER VIRUS (STRAIN 103-135 BA71V) (ASFV)PV2A_BBMV 2A PROTEIN BROAD BEAN MOTTLE VIRUS 636-673 PV2A_CCMV 2APROTEIN COWPEA CHLOROTIC MOTTLE VIRUS 325-363 639-673 762-799 (CCMV)PV2A_CMVFN 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN FNY) 208-243 292-320(CMV) PV2A_CMVQ 2A PROTEIN CUCUMBER MOSAIC VIRUS (STRAIN Q) 205-240(CMV) PV2A_TAV 2A PROTEIN TOMATO ASPERMY VIRUS (TAV) 297-325 PV30K_TRVTC29.1 KD PROTEIN TOBACCO RATTLE VIRUS (STRAIN TCM) 102-133 PV3A_BBMV 3APROTEIN BROAD BEAN MOTTLE VIRUS 155-187 PV3A_BMV 3A PROTEIN BROME MOSAICVIRUS (BMV) 159-189 PV3A_CCMV 3A PROTEIN COWPEA CHLOROTIC MOTTLE VIRUS160-188 (CCMV) PV3A_IBVB 3A PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 5-43 (STRAIN BEAUDETTE) (IBV) PV3A_IBVM 3A PROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS  5-42 (STRAIN M41) (IBV) PV3A_IBVP3 3A PROTEIN AVIANINFECTIOUS BRONCHITIS VIRUS  5-42 PV3A_IBVU5 3A PROTEIN AVIAN INFECTIOUSBRONCHITIS VIRUS  5-42 (STRAIN UK/183/66) (IBV) PV51K_ACLSV 50.8 KDPROTEIN APPLE CHLOROTIC LEAF SPOT VIRUS  70-106 (ACLSV) PV51K_BWYVF 51KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE 366-398 FL-1) (BWYV)PV51K_BWYVG 51 KD PROTEIN BEET WESTERN YELLOWS VIRUS (ISOLATE 366-398GB1) (BWYV) PV56K_PLRV1 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN 1)360-392 (PLRV) PV56K_PLRVW 56 KD PROTEIN POTATO LEAFROLL VIRUS (STRAIN360-392 WAGENINGEN) (PLRV) PV58K_BSMV 58 KD PROTEIN BARLEY STRIPE MOSAICVIRUS (BSMV) 320-353 PV70K_PLRV1 69.7 KD PROTEIN POTATO LEAFROLL VIRUS(STRAIN 1) 220-257 (PLRV) PV70K_PLRVW 69.7 KD PROTEIN POTATO LEAFROLLVIRUS (STRAIN 220-257 WAGENINGEN) (PLRV) PV90K_AMVLE 90 KD PROTEINALFALFA MOSAIC VIRUS (STRAIN 103-131 425/ISOLATE LEIDEN) PVA04_VACCCPROTEIN A4 VACCINIA VIRUS (STRAIN COPENHAGEN) 217-251 PVA04_VACCVPROTEIN A4 VACCINIA VIRUS (STRAIN WR) 217-251 PVA04_VARV PROTEIN A4VARIOLA VIRUS 207-241 PVA11_VACCC PROTEIN A11 VACCINIA VIRUS (STRAINCOPENHAGEN)  95-132 PVA11_VARV PROTEIN A11 VARIOLA VIRUS  96-133PVA18_VACCC 56 KD ABORTIVE LATE PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 390-421 PVA18_VACCV 56 KD ABORTIVE LATE PROTEIN VACCINIAVIRUS (STRAIN WR) 390-421 PVA18_VARV 56 KD ABORTIVE LATE PROTEIN VARIOLAVIRUS 390-421 PVA23_VACCC PROTEIN A23 VACCINIA VIRUS (STRAIN COPENHAGEN) 81-111 170-203 PVA23_VARV PROTEIN A23 VARIOLA VIRUS  81-111 170-203PVA31_VACCC PROTEIN A31 VACCINIA VIRUS (STRAIN COPENHAGEN) 42-76PVA31_VACCV PROTEIN A31 VACCINIA VIRUS (STRAIN WR) 42-76 PVA31_VARVPROTEIN A31 VARIOLA VIRUS 42-76 PVA32_VACCV PROTEIN A32 VACCINIA VIRUS(STRAIN WR), AND 48-79 VACCINIA VIRUS (STRAIN COPENHAG PVA32_VARVPROTEIN A32 VARIOLA VIRUS 18-49 PVA40_VACCC PROTEIN A40 VACCINIA VIRUS(STRAIN COPENHAGEN)  4-37 PVA43_VACCC PROTEIN A43 VACCINIA VIRUS (STRAINCOPENHAGEN)  94-129 PVA43_VACCV PROTEIN A43 VACCINIA VIRUS (STRAIN WR) 94-129 PVA43_VARV PROTEIN A43 VARIOLA VIRUS  95-130 PVA51_VACCC PROTEINA51 VACCINIA VIRUS (STRAIN COPENHAGEN) 109-143 PVA51_VACCV PROTEIN A51VACCINIA VIRUS (STRAIN WR) 109-143 PVAL1_BCV AL1 PROTEIN BEET CURLY TOPVIRUS (BCTV)  89-118 PVAL1_BGMV AL1 PROTEIN BEAN GOLDEN MOSAIC VIRUS 89-118 PVAL1_CLVK AL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN WEST  88-117KENYAN 844 PVAL1_CLVN AL1 PROTEIN CASSAVA LATENT VIRUS (STRAIN  88-117NIGERIAN) PVAL1_PYMVV AL1 PROTEIN POTATO YELLOW MOSAIC VIRUS (ISOLATE 89-118 VENEZUELA) PVAL1_TGMV AL1 PROTEIN TOMATO GOLDEN MOSAIC VIRUS(TGMV)  90-119 PVAL1_TYLCM AL1 PROTEIN TOMATO YELLOW LEAF CURL VIRUS 89-118 (STRAIN MARMANDE) (TYLCV) PLAL1_TYLCV AL1 PROTEIN TOMATO YELLOWLEAF CURL VIRUS  87-116 (TYLCV) PVAL3_BCTV AL3 PROTEIN BEET CURLY TOPVIRUS (BCTV)  82-115 PVAL3_CLVK AL3 PROTEIN CASSAVA LATENT VIRUS (STRAINWEST  77-113 KENYAN 844) PVAL3_CLVN AL3 PROTEIN CASSAVA LATENT VIRUS(STRAIN  77-113 NIGERIAN) PVAL3_TYLCM AL3 PROTEIN TOMATO YELLOW LEAFCURL VIRUS  78-116 (STRAIN MARMANDE) (TYLCV) PVAL3_TYLCV AL3 PROTEINTOMATO YELLOW LEAF CURL VIRUS  77-113 (TYLCV PVAT_CAMVC APHIDTRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 20-53  81-116CM-1841) (CAMV) PVAT_CAMVD APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAICVIRUS (STRAIN 20-53 102-130 D/H) (CAMV PVAT_CAMVE APHID TRANSMISSIONPROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 20-53  81-116 BBC) (CAMV)PVAT_CAMVN APHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN20-53  81-116 NY8153) (CAMV) PVAT_CAMVP APHID TRANSMISSION PROTEINCAULIFLOWER MOSAIC VIRUS (STRAIN 20-53  81-116 PV147) (CAMV) PVAT_CAMVSAPHID TRANSMISSION PROTEIN CAULIFLOWER MOSAIC VIRUS (STRAIN 20-53 81-116 STRASBOURG) (CAMV) PVB04_VACCC PROTEIN B4 VACCINIA VIRUS (STRAINCOPENHAGEN) 124-156 489-525 PVB04_VACCV PROTEIN B4 VACCINIA VIRUS(STRAIN WR) 124-156 489-525 PVB04_VARV PROTEIN B4 VARIOLA VIRUS 489-525PVB16_COWPX INTERLEUKIN-1 BINDING PROTEIN COWPOX VIRUS (CPV)  89-126PRECURSOR PVB16_VACCV INTERLEUKIN-1 BINDING PROTEIN VACCINIA VIRUS(STRAIN WR)  89-126 PRECURSOR PVB19_VACCC SURFACE ANTIGEN S PRECURSORVACCINIA VIRUS (STRAIN COPENHAGEN) 213-244 PVB19_VACCD SURFACE ANTIGEN SPRECURSOR VACCINIA VIRUS (STRAIN DAIREN 1) 211-242 PVB19_VACCV SURFACEANTIGEN S PRECURSOR VACCINIA VIRUS (STRAIN WR) 211-242 PVB19_VARVSURFACE ANTIGEN S PRECURSOR VARIOLA VIRUS 211-242 PVBR1_BGMV BR1 PROTEINBEAN GOLDEN MOSAIC VIRUS 166-198 PVC03_SFVKA G-PROTEIN COUPLED RECEPTORSHOPE FIBROMA VIRUS (STRAIN  98-130 HOMOLOG C3 KASZA) (SFV) PVC04_VACCCPROTEIN C4 VACCINIA VIRUS (STRAIN COPENHAGEN) 109-139 182-216PVC04_VACCV PROTEIN C4 VACCINIA VIRUS (STRAIN WR) 109-139 183-215PVC04_VARV PROTEIN C4 VARIOLA VIRUS 109-139 PVC06_VACCC PROTEIN C6VACCINIA VIRUS (STRAIN COPENHAGEN) 36-67 PVC06_VACCV PROTEIN C6 VACCINIAVIRUS (STRAIN WR) 36-67 PVC06_VARV PROTEIN C6 VARIOLA VIRUS 36-67PVC07_SFVKA HYPOTHETICAL PROTEIN C7 SHOPE FIBROMA VIRUS (STRAIN 60-97KASZA) (SFV) PVC09_VACCC PROTEIN C9 VACCINIA VIRUS (STRAIN COPENHAGEN)573-610 PVC09_VACCV PROTEIN C9 VACCINIA VIRUS (STRAIN WR) 573-610PVC10_SFVKA HYPOTHETICAL PROTEIN C10 SHOPE FIBROMA VIRUS (STRAIN  85-121KASZA) (SFV) PVC10_VACCC PROTEIN C10 VACCINIA VIRUS (STRAIN COPENHAGEN)121-158 PVC10_VACCV PROTEIN C10 VACCINIA VIRUS (STRAIN WR) 121-158PVC10_VARV PROTEIN C10 VARIOLA VIRUS 121-158 PVC21_VACCC PROTEIN C21/B27VACCINIA VIRUS (STRAIN COPENHAGEN)  3-34 PVCAP_EBV MAJOR CAPSID PROTEINEPSTEIN-BARR VIRUS (STRAIN B95-8) 148-183 200-230 (HUMAN HERPESVIRUS 4)PVCAP_HCMVA MAJOR CAPSID PROTEIN HUMAN CYTOMEGALOVIRUS (STRAIN 43-78128-161 258-286 AD169) PVCAP_HSVI1 MAJOR CAPSID PROTEIN HERPES SIMPLEXVIRUS (TYPE 1/STRAIN 17) 19-49 PVCAP_HSV6U MAJOR CAPSID PROTEIN HERPESSIMPLEX VIRUS (TYPE 6/STRAIN 124-161 666-696 841-869 UGANDA-1102)PVCAP_HSVEB MAJOR CAPSID PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 17-54198-232 272-301 AB4P) (EHV-1) PVCAP_HSVSA MAJOR CAPSID PROTEINHERPESVIRUS SAIMIRI (STRAIN 11) 144-179 196-226 734-769 1062-1096PVCAP_PRVIS MAJOR CAPSID PROTEIN PSEUDORABIES VIRUS (STRAIN INDIANA S)189-221 260-289 (PRV) PVCAP_VZVD MAJOR CAPSID PROTEIN VARICELLA-ZOSTERVIRUS (STRAIN 31-68 DUMAS) (VZV) PVCOM_ADE02 MINOR CORE PROTEIN HUMANADENOVIRUS TYPE 2  86-115 PVCOM_ADE05 MINOR CORE PROTEIN HUMANADENOVIRUS TYPE 5  85-114 PVD03_VACCC PROTEIN D3 VACCINIA VIRUS (STRAINCOPENHAGEN) 12-50 146-182 PVD03_VACCV PROTEIN D3 VACCINIA VIRUS (STRAINWR) 12-50 146-182 PVD03_VARV PROTEIN D3 VARIOLA VIRUS 12-50 146-182PVD05_FOWP1 92.6 KD PROTEIN FOWLPOX VIRUS (STRAIN FP-1) 315-352PVD05_VACCC PROTEIN D5 VACCINIA VIRUS (STRAIN COPENHAGEN) 320-348PVD05_VACCV PROTEIN D5 VACCINIA VIRUS (STRAIN WR) 320-348 PVD05_VARVPROTEIN D5 VARIOLA VIRUS 320-348 PVD10_FOWP1 PROTEIN D10 FOWLPOX VIRUS(STRAIN FP-1) 114-143 PVE05_VACCD PROTEIN E5 VACCINIA VIRUS (STRAINDAIREN 1) 31-60 PVE06_VACCC PROTEIN E6 VACCINIA VIRUS (STRAINCOPENHAGEN) 226-260 430-458 511-540 PVE06_VACCV PROTEIN E6 VACCINIAVIRUS (STRAIN WR) 226-260 430-458 511-540 PVE06_VARV PROTEIN E6 VARIOLAVIRUS 430-458 511-540 PVE10_VACCC PROTEIN E10 VACCINIA VIRUS (STRAINCOPENHAGEN)  3-41 PVE10_VACCV PROTEIN E10 VACCINIA VIRUS (STRAIN WR) 3-41 PVE10_VARV PROTEIN E10 VARIOLA VIRUS  3-41 PVE12_HPV16 PROBABLE E1PROTEIN 2 HUMAN PAPILLOMAVIRUS TYPE 16 102-131 PVE18_NPVAC EARLY 18.5 KDPROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 45-77 POLYHEDROSIS VIRUS (ACMNPV)PVE1_HPV05 E1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5  4-35 PVE1_HPV11 E1PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 258-291 PVE1_HPV13 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 13 255-288 PVE1_HPV33 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 33 238-267 519-547 PVE1_HPV35 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 230-263 PVE1_HPV39 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 242-271 PVE1_HPV41 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 41 105-138 193-231 PVE1_HPV58 E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 58 238-267 PVE1_HPV5B E1 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B  6-35 PVE1_HPV6B E1 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 6B 258-291 PVE1_PAPVD E1 PROTEIN DEER PAPILLOMAVIRUS 163-201PVE1_PCPV1 E1 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS 257-290 TYPE 1PVE26_NPVAC EARLY 25.9 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 118-150POLYHEDROSIS VIRUS (ACMNPV) PVE2_HPV57 E2 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 57 151-182 PVE2_RHPV1 E2 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1(RHPV 1) 117-147 PVE41_NPVAC EARLY 40.9 KD PROTEIN AUTOGRAPHACALIFORNICA NUCLEAR 14-52 POLYHEDROSIS VIRUS (ACMNPV) PVE5A_HPV11PROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 11 19-56 PVE5A_HPV6BPROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6B 19-56 PVE5A_HPV6CPROBABLE E5A PROTEIN HUMAN PAPILLOMAVIRUS TYPE 6C 19-56 PVE5_HPV13PROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 13 19-56 PVE5_HPV5BPROBABLE E5 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B  89-118 PVE5_PCPV1PROBABLE E5 PROTEIN PYGMY CHIMPANZEE PAPILLOMAVIRUS 21-58 TYPE 1PVE5_RHPV1 PROBABLE E5 PROTEIN RHESUS PAPILLOMAVIRUS TYPE 1 (RHPV 1)109-140 PVE6_HPV1A E6 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A  91-128PVE7_HPV05 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5 55-90 PVE7_HPV08 E7PROTEIN HUMAN PAPILLOMAVIRUS TYPE 8 55-90 PVE7_HPV11 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 11 47-83 PVE7_HPV16 E7 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 16 47-81 PVE7_HPV1A E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 1A 45-77PVE7_HPV31 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 31 47-83 PVE7_HPV33 E7PROTEIN HUMAN PAPILLOMAVIRUS TYPE 33 47-83 PVE7_HPV35 E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 35 48-84 PVE7_HPV41 E7 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 41 63-94 PVE7_HPV47 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 47 55-90PVE7_HPV51 E7 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 51 61-94 PVE7_HPV58 E7PROTEIN HUMAN PAPILLOMAVIRUS TYPE 58 48-84 PVE7_HPV5B E7 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 55-90 PVE7_HPV6B E7 PROTEIN HUMAN PAPILLOMAVIRUSTYPE 6B 47-83 PVE7_PAPVD E7 PROTEIN DEEP PAPILLOMAVIRUS 48-86 PVE7_PAPVEE7 PROTEIN EUROPEAN ELK PAPILLOMAVIRUS (EEPV) 60-93 PVE94_NPVAC EARLY 94KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 123-157 650-678 POLYHEDROSISVIRUS (ACMNPV) PVEF_GVTN VIRAL ENHANCING FACTOR TRICHOPLUSIA N1GRANULOSIS VIRUS 154-182 (TNGV) PVENV_BEV ENVELOPE PROTEIN BERNE VIRUS(BEV) 16-51  87-117 PVENV_DHV11 ENVELOPE GLYCOPROTEIN PRECURSOR DHORIVIRUS (STRAIN INDIAN/1313/61) 297-335 (DHO) PVENV_MCV1 MAJOR ENVELOPEPROTEIN MOLLUSCUM CONTAGIOSUM VIRUS 203-236 SUBTYPE 1 (MCVI) PVENV_MCV2MAJOR ENVELOPE PROTEIN MOLLUSCUM CONTAGIOSUM VIRUS 203-236 SUBTYPE 2(MCVII) PVENV_VACCC MAJOR ENVELOPE PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 208-241 PVENV_VACCI MAJOR ENVELOPE PROTEIN VACCINIA VIRUS(STRAIN 1HD-J) 208-241 PVENV_VACCP MAJOR ENVELOPE PROTEIN VACCINIA VIRUS(STRAIN L-IVP) 208-241 PVENV_VACCV MAJOR ENVELOPE PROTEIN VACCINIA VIRUS(STRAIN WR) 208-241 PVENV_VARV MAJOR ENVELOPE PROTEIN VARIOLA VIRUS155-187 208-241 PVF03_VACCC PROTEIN F3 VACCINIA VIRUS (STRAINCOPENHAGEN)  2-40 61-93 PVF03_VACCV PROTEIN F3 VACCINIA VIRUS (STRAINWR)  2-40 61-93 PVFP1_FOWPV PROTEIN FP1 FOWLPOX VIRUS 297-330PVFP4_FOWPV PROTEIN FP4 FOWLPOX VIRUS 237-267 PVFP7_CAPVK PROTEIN F7CAPRIPOX VIRUS (STRAIN KS-1)  89-118 PVFUS_VACCC 14 KD FUSION PROTEINVACCINIA VIRUS (STRAIN COPENHAGEN) 28-61 PVFUS_VACCV 14 KD FUSIONPROTEIN VACCINIA VIRUS (STRAIN WR) 28-61 PVFUS_VARV 14 KD FUSION PROTEINVARIOLA VIRUS 28-61 PVG01_HSV11 HYPOTHETICAL GENE 1 PROTEIN ICTALURIDHERPESVIRUS 1 (CHANNEL 317-346 CATFISH VIRUS) (CCV) PVG02_HSVEBHYPOTHETICAL GENE 2 PROTEIN EQUINE HERPESVIRUS TYPE 1 (STRAIN 163-196AB4P) (EHV-1) PVG02_VACCV ISATIN-BETA-THIOSEMICARBAZONE VACCINIA VIRUS(STRAIN WR), AND  92-120 DEPENDENT PROTEI VACCINIA VIRUS (STRAINCOPENHAGE PVG02_VARV ISATIN-BETA-THIOSEMICARBAZONE VARIOLA VIRUS  92-120DEPENDENT PROTEI PVG03_HSVI1 HYPOTHETICAL GENE 3 ICTALURID HERPESVIRUS 1(CHANNEL 108-136 PROTEIN CATFISH VIRUS) (CCV) PVG06_HSVI1 HYPOTHETICALGENE 6 MEMBRANE ICTALURID HERPESVIRUS 1 (CHANNEL 54-83 PROTEIN CATFISHVIRUS) (CCV) PVG06_VACCC PROTEIN G6 VACCINIA VIRUS (STRAIN COPENHAGEN) 99-136 PVG06_VARV PROTEIN G6 VARIOLA VIRUS  99-136 PVG07_VACCC PROTEING7 VACCINIA VIRUS (STRAIN COPENHAGEN) 113-145 PVG07_VARV PROTEIN G7VARIOLA VIRUS 113-145 PVG09_VACCC PROTEIN F1 VACCINIA VIRUS (STRAINCOPENHAGEN) 303-338 PVG09_VACCV PROTEIN F1 VACCINIA VIRUS (STRAIN WR)266-301 PVG09_VARV PROTEIN F1 VARIOLA VIRUS 303-338 PVG11_HSV11HYPOTHETICAL GENE 11 ZINC-BINDING ICTALURID HERPESVIRUS 1 (CHANNEL150-183 PROTEIN CATFISH VIRUS) (CCV) PVG12_HSV11 HYPOTHETICAL GENE 12ZINC-BINDING ICTALURID HERPESVIRUS 1 (CHANNEL 206-243 PROTEIN CATFISHVIRUS) (CCV) PVG12_HSVSA HYPOTHETICAL GENE 12 PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11)  68-106 PVG1_SPVIR CAPSID PROTEIN SPIROPLASMA VIRUSSPVI-R8A2 B 254-292 303-337 414-452 PVG22_HSV11 HYPOTHETICAL GENE 22PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 300-337 647-678 CATFISH VIRUS)(CCV) PVG23_HSV11 HYPOTHETICAL GENE 23 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL  70-108 CATFISH VIRUS) (CCV) PVG26_HSV11 HYPOTHETICAL GENE 26PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  94-125 CATFISH VIRUS) (CCV)PVG27_HSVSA HYPOTHETICAL GENE 27 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)36-74 PVG28_HSV11 HYPOTHETICAL GENE 28 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 491-521 CATFISH VIRUS) (CCV) PVG2R_AMEPV HYPOTHETICAL G2RPROTEIN AMSACTA MOOREI ENTOMOPOXVIRUS 180-217 (AMEPV) PVG2_SPV4 GENE 2PROTEIN SPIROPLASMA VIRUS 4 (SPV4) 209-244 PVG35_HSV11 HYPOTHETICAL GENE35 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 15-46 190-226 CATFISH VIRUS)(CCV) PVG36_HSVSA POSSIBLE TYROSINE-PROTEIN KINASE HERPESVIRUS SAIMIRI(STRAIN 11) 151-185 PVG39_HSV11 HYPOTHETICAL GENE 39 PROTEIN ICTALURIDHERPESVIRUS 1 (CHANNEL 543-577 648-682 CATFISH VIRUS) (CCV) PVG40_HSVSAHYPOTHETICAL GENE 40 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 187-216PVG41_HSV11 HYPOTHETICAL GENE 41 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 11-45 202-233 CATFISH VIRUS) (CCV) PVG42_HSV11 HYPOTHETICALGENE 42 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL  91-125 CATFISH VIRUS)(CCV) PVG43_HSV11 HYPOTHETICAL GENE 43 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 109-140 157-185 CATFISH VIRUS) (CCV) PVG46_HSV11 PROBABLE MAJORGLYCOPROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 888-925 CATFISH VIRUS)(CCV) PVG48_HSVSA HYPOTHETICAL GENE 48 PROTEIN HERPESVIRUS SAIMIRI(STRAIN 11) 329-357 PVG50_HSVSA PROBABLE TRANSCRIPTION ACTIVAORHERPESVIRUS SAIMIRI (STRAIN 11) 113-141 EDRF1 PVG51_HSV11 HYPOTHETICALGENE 51 ICTALURID HERPESVIRUS 1 (CHANNEL 29-64  84-120 MEMBRANE PROTEINCATFISH VIRUS) (CCV) PVG52_HSV11 HYPOTHETICAL GENE 52 PROTEIN ICTALURIDHERPESVIRUS 1 (CHANNEL  96-134 CATFISH VIRUS) (CCV) PVG55_HSV11HYPOTHETICAL GENE 55 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 100-129CATFISH VIRUS) (CCV) PVG56_HSV11 HYPOTHETICAL GENE 56 PROTEIN ICTALURIDHERPESVIRUS 1 (CHANNEL 364-396 631-667 1091-1126 CATFISH VIRUS) (CCV)PVG58_HSV11 HYPOTHETICAL GENE 58 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 342-375 480-508 CATFISH VIRUS) (CCV) PVG58_HSVSA GENE 58PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11) 25-60 195-233 PVG59_HSV11HYPOTHETICAL GENE 59 ICTALURID HERPESVIRUS 1 (CHANNEL  82-118 MEMBRANEPROTEIN CATFISH VIRUS) (CCV) PVG61_HSV11 HYPOTHETICAL GENE 61 PROTEINICTALURID HERPESVIRUS 1 (CHANNEL  76-109 CATFISH VIRUS) (CCV)PVG64_HSV11 HYPOTHETICAL GENE 64 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 55-89 363-401 420-452 CATFISH VIRUS) (CCV) PVG65_HSV11HYPOTHETICAL GENE 65 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 801-8361146-1174 1290-1326 CATFISH VIRUS) (CCV) PVG67_HSV11 HYPOTHETICAL GENE67 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 1150-1185 CATFISH VIRUS)(CCV) PVG6_SPV1R GENE 6 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 60-89PVG71_HSVSA HYPOTHETICAL GENE 71 PROTEIN HERPESVIRUS SAIMIRI (STRAIN 11)128-158 PVG72_HSV11 HYPOTHETICAL GENE 72 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 445-478 720-751 1158-1189 1252-1285 CATFISH VIRUS) (CCV)PVG75_HSV11 HYPOTHETICAL GENE 75 PROTEIN ICTALURID HERPESVIRUS 1(CHANNEL 263-291 387-422 CATFISH VIRUS) (CCV) PVG76_HSV11 HYPOTHETICALGENE 76 PROTEIN ICTALURID HERPESVIRUS 1 (CHANNEL 187-221 CATFISH VIRUS)(CCV) PVG7_SPVIR GENE 7 PROTEIN SPIROPLASMA VIRUS SPV1-R8A2 B 18-46PVGF1_IBVB F1 PROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS 1719-17471856-1891 2108-2146 3601-3633 (STRAIN BEAUDETTE) (IBV) PVGH3_HCMVAGLYCOPROTEIN H301 PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN  80-115157-185 AD169) PVGL2_CVBF E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS(STRAIN F15) 1259-1294 PVGL2_CVBL9 E2 GLYCOPROTEIN PRECURSOR BOVINECORONAVIRUS (STRAIN L9) 651-681 PVGL2_CVBLY E2 GLYCOPROTEIN PRECURSORBOVINE CORONAVIRUS (STRAIN LY-138) 1259-1294 PVGL2_CVBM E2 GLYCOPROTEINPRECURSOR BOVINE CORONAVIRUS (STRAIN MEBUS) 1259-1294 PVGL2_CVBQ E2GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN QUEBEC) 1259-1294PVGL2_CVBV E2 GLYCOPROTEIN PRECURSOR BOVINE CORONAVIRUS (STRAIN VACCINE)1259-1294 PVGL2_CVH22 E2 GLYCOPROTEIN PRECURSOR HUMAN CORONAVIRUS(STRAIN 229E) 1053-1088 PVGL2_CVM4 E2 GLYCOPROTEIN PRECURSOR MURINECORONAVIRUS MHV (STRAIN WILD 1267-1304 TYPE 4) (MHV-4) PVGL2_CVMA5 E2GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN A59 1215-1252PVGL2_CVMJC E2 GLYCOPROTEIN PRECURSOR MURINE CORONAVIRUS MHV (STRAIN1267-1304 JHMV/VARIANT CL-2) PVGL2_CVMJH E2 GLYCOPROTEIN PRECURSORMURINE CORONAVIRUS MHV (STRAIN JHM) 1126-1163 PVGL2_CVPFS E2GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 632-665 736-764 1328-1363GASTROENTERITIS CORONAVIRUS PVGL2_CVPMI E2 GLYCOPROTEIN PRECURSORPORCINE TRANSMISSIBLE 632-665 736-764 1328-1363 GASTROENTERITISCORONAVIRUS PVGL2_CVPPR E2 GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE630-663 734-762 1326-1361 GASTROENTERITIS CORONAVIRUS PVGL2_CVPPU E2GLYCOPROTEIN PRECURSOR PORCINE TRANSMISSIBLE 630-663 734-762 1326-1361GASTROENTERITIS CORONAVIRUS PVGL2_CVPR8 E2 GLYCOPROTEIN PRECURSORPORCINE RESPIRATORY CORONAVIRUS 512-540 1104-1139 PVGL2_CVPRM E2GLYCOPROTEIN PRECURSOR PORCINE RESPIRATORY CORONAVIRUS 408-441 512-5401104-1139 (STRAIN RM4) (PRCV) PVGL2_CVPRT E2 GLYCOPROTEIN PRECURSORPORCINE TRANSMISSIBLE 630-663 734-762 1326-1361 GASTROENTERITISCORONAVIRUS (STRAIN NEB7) PVGL2_FIPV E2 GLYCOPROTEIN PRECURSOR FELINEINFECTIOUS PERITONTIS VIRUS 635-668 739-767 1331-1366 (STRAIN 79-1146)(FIPV) PVGL2_IBVB E2 GLYCOPROTEIN PRECURSOR AVIAN INFECTIOUS BRONCHITISVIRUS 153-188 (STRAIN BEAUDETTE) (IBV) PVGLB_HCMVA GLYCOPROTEIN BPRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN 116-147 706-743 AD169)PVGLB_HCMVT GLYCOPROTEIN B PRECURSOR HUMAN CYTOMEGALOVIRUS (STRAIN116-147 707-744 TOWNE) PVGLB_HSV6U GLYCOPROTEIN B HERPES SIMPLEX VIRUS(TYPE 6/STRAIN  72-110 UGANDA-1102) PVGLB_HSVB1 GLYCOPROTEIN 1 PRECURSORBOVINE HERPESVIRUS TYPE 1 254-288 PVGLB_HSVB2 GLYCOPROTEIN B-1 PRECURSORBOVINE HERPESVIRUS 2 (STRAIN BMV) 745-774 (BOVINE MAMMILLITIS VIRUSPVGLB_HSVBC GLYCOPROTEIN 1 PRECURSOR BOVINE HERPESVIRUS 1 (STRAIN COOPER253-287 PVGLB_ILTV6 GLYCOPROTEIN B PRECURSOR INFECTIOUSLARYNGOTRACHEITIS VIRUS 442-472 (STRAIN 632) (ILIV) PVGLB_ILTVSGLYCOPROTEIN B PRECURSOR INFECTIOUS LARYNGOTRACHEITIS VIRUS 452-482(STRAIN SA-2) (ILTV) PVGLB_ILTVT GLYCOPROTEIN B PRECURSOR INFECTIOUSLARYNGOTRACHEITIS VIRUS 452-482 (STRAIN THORNE V882) (ILTV) PVGLB_MCMVSGLYCOPROTEIN B PRECURSOR MURINE CYTOMEGALOVIRUS (STRAIN 135-163 738-776SMITH) PVGLC_HSV11 GLYCOPROTEIN C PRECURSOR HERPES SIMPLEX VIRUS (TYPE1/STRAIN 17) 467-500 PVGLC_HSVIK GLYCOPROTEIN C PRECURSOR HERPES SIMPLEXVIRUS 467-500 (TYPE 1/STRAIN KOS) PVGLC_HSV2 GLYCOPROTEIN C PRECURSORHERPES SIMPLEX VIRUS (TYPE 2) 435-465 PVGLC_HSV23 GLYCOPROTEIN CPRECURSOR HERPES SIMPLEX VIRUS 436-466 (TYPE 2/STRAIN 333) PVGLC_HSVBCGLYCOPROTEIN GH1 PRECURSOR BOVINE HERPESVIRUS TYPE 1 (STRAIN 475-507COOPER) PVGLC_VZVD GLYCOPROTEIN GPV VARICELLA-ZOSTER VIRUS (STRAIN351-388 513-548 DUMAS) (VZV) PVGLC_VZVS GLYCOPROTEIN GPVVARICELLA-ZOSTER VIRUS (STRAIN 351-388 513-548 SCOTT) (VZV) PVGLD_HSVEAGLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 1 (STRAIN 340-370 AB1)(EHV-1) PVGLD_HSVEB GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUS TYPE 141-70 390-420 PVGLD_HSVEK GLYCOPROTEIN D PRECURSOR EQUINE HERPESVIRUSTYPE 1 41-70 390-420 PVGLE_HSVE4 GLYCOPROTEIN E EQUINE HERPESVIRUS TYPE4  95-125 PVGLE_HSVEB GLYCOPROTEIN E PRECURSOR EQUINE HERPESVIRUS TYPE 1 63-100 390-420 PVGLE_HSVEL GLYCOPROTEIN E PRECURSOR EQUINE HERPESVIRUSTYPE 1  63-100 392-422 PVGLE_PRVR1 GLYCOPROTEIN G1 PRECURSORPSEUDORABIES VIRUS (STRAIN RICE) (PRV) 332-369 PVGLE_BRSVA FUSIONGLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIAL VIRUS 265-301482-511 (STRAIN A51908) (BRS) PVGLF_BRSVC FUSION GLYCOPROTEIN PRECURSORBOVINE RESPIRATORY SYNCYTIAL VIRUS 484-513 (STRAIN COPENHAGEN) (BRS)PVGLF_BRSVR FUSION GLYCOPROTEIN PRECURSOR BOVINE RESPIRATORY SYNCYTIALVIRUS 484-513 (STRAIN RB94) (BRS) PVGLF_CDYO FUSION GLYCOPROTEINPRECURSOR CANINE DISTEMPER VIRUS (STRAIN 562-596 ONDERSTEPOORT) (CDV)PVGLF_HRSV1 FUSION GLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIALVIRUS 484-513 PVGLF_HRSVA FUSION GLYCOPROTEIN PRECURSOR HUMANRESPIRATORY SYNCYTIAL VIRUS 484-513 (STRAIN A2) PVGLF_HRSVL FUSIONGLYCOPROTEIN PRECURSOR HUMAN RESPIRATORY SYNCYTIAL VIRUS 484-513(SUBGROUP A/STRAIN LONG) PVGLF_HRSVR FUSION GLYCOPROTEIN PRECURSOR HUMANRESPIRATORY SYNCYTIAL VIRUS 484-513 (STRAIN RSS-2) PVGLF_MEASE FUSIONGLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN EDMONSTON) 224-256 451-484PVGLF_MEAS1 FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS (STRAIN IP-3-CA227-259 454-487 PVGLF_MEASY FUSION GLYCOPROTEIN PRECURSOR MEASLES VIRUS(STRAIN YAMAGATA-1) 224-256 451-484 PVGLF_MUMP1 FUSION GLYCOPROTEINPRECURSOR MUMPS VIRUS (STRAIN SBL-1)  5-38 446-474 PVGLF_MUMPM FUSIONGLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN MIYAHARA 446-474 VACCINE)PVGLF_MUMPR FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAIN RW)446-474 PVGLF_MUMPS FUSION GLYCOPROTEIN PRECURSOR MUMPS VIRUS (STRAINSBL)  5-38 446-474 PVGLF_NDV1 FUSION GLYCOPROTEIN PRECURSOR NEWCASTLEDISEASE VIRUS (STRAIN 132-165 ITALIEN/45) (NDV) PVGLF_NDVL FUSIONGLYCOPROTEIN PRECURSOR NEWCASTLE DISEASE VIRUS (STRAIN 132-165 LAS/46)(NDV) PVGLF_PHODV FUSION GLYCOPROTEIN PRECURSOR PHOCINE DISTEMPER VIRUS531-565 PVGLF_PHHC FUSION GLYCOPROTEIN PRECURSOR HUMAN PARAINFLUENZA 1VIRUS 456-484 (STRAIN C39) PVGLF_P13B FUSION GLYCOPROTEIN PRECURSORBOVINE PARAINFLUENZA 3 VIRUS 453-481 PVGLF_P13H4 FUSION GLYCOPROTEINPRECURSOR HUMAN PARAINFLUENZA 3 VIRUS 453-481 (STRAIN NIH 47885PVGLF_RINDK FUSION GLYCOPROTEIN PRECURSOR RINDERPEST VIRUS (STRAINKABETTE O) 220-252 447-480 (RDV) PVGLF_RINDL FUSION GLYCOPROTEINPRECURSOR RINDERPEST VIRUS (STRAIN L) (RDV) 220-252 447-480 PVGLF_SEND5FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAIN Z/HOST MUTANTS)460-488 PVGLF_SENDF FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS (STRAINFUSHIMI) 460-488 PVGLF_SENDH FUSION GLYCOPROTEIN PRECURSOR SENDAI VIRUS(STRAIN HARRIS) 460-488 PVGLF_SENDJ FUSION GLYCOPROTEIN PRECURSOR SENDAIVIRUS (STRAIN HVJ) 460-488 PVGLF_SENDZ FUSION GLYCOPROTEIN PRECURSORSENDAI VIRUS (STRAIN Z) 460-488 PVGLF_SV5 FUSION GLYCOPROTEIN PRECURSORSIMIAN VIRUS 5 (STRAIN W3) (SV5) 446-474 PVGLF_TRTV FUSION GLYCOPROTEINPRECURSOR TURKEY RHINOTRACHEITIS VIRUS (TRTV) 452-481 PVGLG_HSVEBGLYCOPROTEIN G PRECURSOR EQUINE HERPESVIRUS TYPE 1 327-364 (STRAIN AB4P)(EHV-1) PVGLG_SYNV SPIKE GLYCOPROTEIN PRECURSOR SONCHUS YELLOW NET VIRUS(SYNV) 524-553 PVGLG_VSVIG SPIKE GLYCOPROTEIN PRECURSOR VESICULARSTOMATITIS VIRUS 450-488 (SEROTYPE INDIANA/STRAIN GLASGOW) PVGLG_VSVJOSPIKE GLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 457-492(SEROTYPE NEW JERSEY/STRAIN OGDEN) PVGLG_VSVO SPIKE GLYCOPROTEINPRECURSOR VESICULAR STOMATITIS VIRUS 450-488 (STRAIN ORSAY) PVGLG_VSVSJSPIKE GLYCOPROTEIN PRECURSOR VESICULAR STOMATITIS VIRUS 450-488 (STRAINSAN JUAN) PVGLH_HCMVA GLYCOPROTEIN H PRECURSOR HUMAN CYTOMEGALOVIRUS691-719 (STRAIN AD169) PVGLH_HCMVT GLYCOPROTEIN H PRECURSOR HUMANCYTOMEGALOVIRUS 690-718 (STRAIN TOWNE) PVGLH_HSV6G GLYCOPROTEIN HPRECURSOR HERPES SIMPLEX VIRUS (TYPE 6/STRAIN GS) 215-247 640-677PVGLH_HSVE4 GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 4 814-850PVGLH_HSVEB GLYCOPROTEIN H PRECURSOR EQUINE HERPESVIRUS TYPE 1 807-843PVGLI_HCMVA IMMEDIATE EARLY GLYCOPROTEIN HUMAN CYTOMEGALOVIRUS 158-194PRECURSOR (STRAIN AD169) PVGLM_BUNGE M POLYPROTEIN PRECURSOR BUNYAVIRUSGERMISTON 197-227 438-468  982-1020 1049-1084 PVGLM_BUNL7 M POLYPROTEINPRECURSOR BUNYAVIRUS LA CROSSE (ISOLATE L74) 190-220 PVGLM_BUNSH MPOLYPROTEIN PRECURSOR BUNYAVIRUS SNOWSHOE HARE 190-220 344-381PVGLM_BUNYW M POLYPROTEIN PRECURSOR BUNYAMWERA VIRUS 193-228 434-472823-854 PVGLM_DUGBV M POLYPROTEIN PRECURSOR DUGBE VIRUS 244-273 637-672886-915 935-965 1403-1441 PVGLM_HANTB M POLYPROTEIN PRECURSOR HANTAANVIRUS (STRAIN B-1) 610-641 1081-1119 (KOREAN HEMORRHAGIC FEVER VIRUS)PVGLM_HANTH M POLYPROTEIN PRECURSOR HANTAAN VIRUS (STRAIN HOJO) 188-222612-643 1082-1120 PVGLM_HANTL M POLYPROTEIN PRECURSOR HANTAAN VIRUS(STRAIN LEE) 188-222 612-643 1083-1121 PVGLM_HANTV M POLYPROTEINPRECURSOR HANTAAN VIRUS (STRAIN 76-118) 188-222 612-643 1083-1121PVGLM_INSV M POLYPROTEIN PRECURSOR IMPATIENS NECROTIC SPOT VIRUS (INSV)269-307 1028-1062 PVGLM_PHV M POLYPROTEIN PRECURSOR PROSPECT HILL VIRUS(PHV) 616-649 1088-1121 PVGLM_PTPV M POLYPROTEIN PRECURSOR PUNTA TOROPHLEBOVIRUS 949-982 1275-1309 PVGLM_PUUMH M POLYPROTEIN PRECURSORPUUMALA VIRUS (STRAIN HALLNAS B1) 620-653 1092-1125 PVGLM_PUUMS MPOLYPROTEIN PRECURSOR PUUMALA VIRUS (STRAIN SOTKAMO) 620-653 1092-1125PVGLM_RVFV M POLYPROTEIN PRECURSOR RIFT VALLEY FEVER VIRUS (RVFV)620-650 830-863 PVGLM_RVFVZ M POLYPROTEIN PRECURSOR RIFT VALLEY FEVERVIRUS 620-650 830-863 1156-1185 (STRAIN ZH-648 M12) (RVFV) PVGLM_SEOU8 MPOLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN 80-39) 610-641 1081-1119PVGLM_SEOUR M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN R22) 605-6411082-1120 PVGLM_SEOUS M POLYPROTEIN PRECURSOR SEOUL VIRUS (STRAIN SR-11)610-641 1081-1119 (SAPPORO RAT VIRUS) PVGLM_UUK M POLYPROTEIN PRECURSORUUKUNIEMI VIRUS (UUK) 431-468 966-995 PVGLP_BEY PEPLOMER GLYCOPROTEINPRECURSOR BERNE VIRUS (BEV) 1491-1526 PVGLY_JUNIN GLYCOPROTEINPOLYPROTEIN PRECURSOR JUNIN ARENAVIRUS 12-45 PVGLY_LASSG GLYCOPROTEINPOLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN GA391) 237-265 PVGLY_LASSJGLYCOPROTEIN POLYPROTEIN PRECURSOR LASSA VIRUS (STRAIN JOSIAH) 238-266PVGLY_PIARV GLYCOPROTEIN POLYPROTEIN PRECURSOR PICHINDE ARENAVIRUS 12-50PVGLY_TACV GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS 12-50PVGLY_TACV5 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBE VIRUS (STRAIN V512-50  89-124 PVGLY_TACV7 GLYCOPROTEIN POLYPROTEIN PRECURSOR TACARIBEVIRUS (STRAIN V7) 12-50  89-124 PVGLY_TACVT GLYCOPROTEIN POLYPROTEINPRECURSOR TACARIBE VIRUS (STRAIN TRVL 11598) 12-50  89-124 PVGNB_CPMVGENOME POLYPROTEIN B COWPEA MOSAIC VIRUS (CPMV) 1527-1555 PVGNM_CPMVGENOME POLYPROTEIN M COWPEA MOSAIC VIRUS (CPMV) 209-242 741-771PVGNM_CPSMV GENOME POLYPROTEIN M COWPEA SEVERE MOSAIC VIRUS 50-86479-515 (STRAIN DG) PVGNM_RCMV GENOME POLYPROTEIN M RED CLOVER MOTTLEVIRUS (RCMV) 766-799 PVGP2_EBV PROBABLE MEMBRANE ANTIGEN GP220EPSTEIN-BARR VIRUS (STRAIN B95-8)  78-111 (HUMAN HERPESVIRUS 4)PVGP3_EBV ENVELOPE GLYCOPROTEIN GP340 EPSTEIN-BARR VIRUS (STRAIN B95-8) 78-111 (HUMAN HERPESVIRUS 4) PVH02_VACCC LATE PROTEIN H2 VACCINIA VIRUS(STRAIN COPENHAGEN) 54-89 PVH02_VACCV LATE PROTEIN H2 VACCINIA VIRUS(STRAIN WR) 54-89 PVH02_VARV LATE PROTEIN H2 VARIOLA VIRUS PVH05_VACCCPROTEIN H5 VACCINIA VIRUS (STRAIN COPENHAGEN) 115-149 PVH05_VACCVPROTEIN H5 VACCINIA VIRUS (STRAIN WR) 115-149 PVH05_VARV PROTEIN H5VARIOLA VIRUS 133-167 PVHEL_LSV PROBABLE HELICASE LILY SYMPTOMLESS VIRUS(LSV) 107-143 PVI01_VACCC PROTEIN I1 VACCINIA VIRUS (STRAIN COPENHAGEN)54-82 PVI01_VARV PROTEIN I1 VARIOLA VIRUS 54-82 PVI06_VACCV PROTEIN I6VACCINIA VIRUS (STRAIN WR) 55-88 PVI06_VARV PROTEIN I6 VARIOLA VIRUS55-88 PVI08_VACCC PUTATIVE RNA HELICASE I8 VACCINIA VIRUS (STRAINCOPENHAGEN) 591-624 PVI08_VACCV PUTATIVE RNA HELICASE I8 VACCINIA VIRUS(STRAIN WR) 591-624 PVI08_VARV PUTATIVE RNA HELICASE I8 VARIOLA VIRUS591-624 PVIE1_HCMVA 55 KD IMMEDIATE-EARLY PROTEIN 1 HUMANCYTOMEGALOVIRUS 243-271 (STRAIN AD169) PV1E1_HCMVT 55 KD IMMEDIATE-EARLYPROTEIN 1 HUMAN CYTOMEGALOVIRUS 243-271 (STRAIN TOWNE) PVIF_BIV06 VIRIONINFECTIVITY FACTOR BOVINE IMMUNODEFICIENCY VIRUS 42-78 (ISOLATE 106)(BIV) PVIF_BIV27 VIRION INFECTIVITY FACTOR BOVINE IMMUNODEFICIENCY VIRUS42-78 (ISOLATE 127) (BIV) PVIF_SIVGB VIRION INFECTIVITY FACTOR SIMIANIMMUNODEFICIENCY VIRUS 46-78 (ISOLATE GB1) PVIF_SIVMK VIRION INFECTIVITYFACTOR SIMIAN IMMUNODEFICIENCY VIRUS  82-111 (K6W ISOLATE) (SIV-MAC)PVIMP_EBV PROBABLE INTEGRAL MEMBRANE EPSTEIN-BARR VIRUS (STRAIN B95-8)125-159 PROTEIN BBRF3 (HUMAN HERPESVIRUS 4) PVIMP_HCMVA PROBABLEINTEGRAL MEMBRANE PROTEIN HUMAN CYTOMEGALOVIRUS  68-100 (STRAIN AD169PVIMP_HSV11 PROBABLE INTEGRAL MEMBRANE PROTEIN HERPES SIMPLEX VIRUS(TYPE 1/STRAIN 17)  83-114 136-171 250-282 PVIMP_HSVEB PROBABLE INTEGRALMEMBRANE PROTEIN EQUINE HERPESVIRUS TYPE 1 24-56  93-127 145-180 332-361(STRAIN AB4P) (EHV-1) PVIMP_HSVSA INTEGRAL MEMBRANE PROTEIN HERPESVIRUSSAIMIRI (STRAIN 11)  76-111 PVINT_SSV1 PROBABLE INTEGRASE SULFOLOBUSVIRUS-LIKE PARTICLE SSV1 253-291 PVJ05_VACCC PROTEIN J5 VACCINIA VIRUS(STRAIN COPENHAGEN) 54-85 PVJ05_VACCV PROTEIN J5 VACCINIA VIRUS (STRAINWR) 54-85 PVJ05_VARV PROTEIN J5 VARIOLA VIRUS 54-85 PVK04_VACCC PROTEINK4 VACCINIA VIRUS (STRAIN COPENHAGEN)  87-120 PVK04_VACCV PROTEIN K4VACCINIA VIRUS (STRAIN WR)  87-120 PVK05_VACCC PROTEIN K5 VACCINIA VIRUS(STRAIN COPENHAGEN)  74-103 PVK05_VACCV PROTEIN K5 VACCINIA VIRUS(STRAIN WR)  87-116 PVL02_VACCC PROTEIN L2 VACCINIA VIRUS (STRAINCOPENHAGEN) 39-76 PVL02_VACCV PROTEIN L2 VACCINIA VIRUS (STRAIN WR)39-76 PVL02_VARV PROTEIN L2 VARIOLA VIRUS 39-76 PLV03_VACCC PROTEIN L3VACCINIA VIRUS (STRAIN COPENHAGEN) 292-322 PVL03_VACCV PROTEIN L3VACCINIA VIRUS (STRAIN WR) 292-322 PVL03_VARV PROTEIN L3 VARIOLA VIRUS291-321 PVL05_VACCV PROTEIN L5 VACCINIA VIRUS (STRAIN WR), AND 16-45VACCINIA VIRUS (STRAIN COPENHAGE PVL05_VARV PROTEIN L5 VARIOLA VIRUS16-45 PVL1_HPVSB PROBABLE L1 PROTEIN HUMAN PAPILLOMAVIRUS TYPE 5B373-406 PVL2_CRPVK PROBABLE L2 PROTEIN COTTONTAIL RABBIT (SHOPE) 26-57PAPILLOMAVIRUS (STRAIN KANSAS) (CRPV) PVL2_HPV05 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 5 27-57 PVL2_HPV08 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 8 27-57 PVL2_HPV1A PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 1A 26-56 PVL2_HPV39 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 39 29-59 285-313 PVL2_HPV42 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 42 344-379 PVL2_HPV47 PROBABLE L2 PROTEINHUMAN PAPILLOMAVIRUS TYPE 47 26-57 PVL2_HPV51 PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 51 29-59 PVL2_HPV5B PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE 5B 27-57 PVL2_HPVME PROBABLE L2 PROTEIN HUMANPAPILLOMAVIRUS TYPE ME180 29-59 PVL2_PCPV1 PROBABLE L2 PROTEIN PYGMYCHIMPANZEE PAPILLOMAVIRUS 29-59 TYPE 1 PVL96_IRV1 L96 PROTEIN TIPULAIRIDESCENT VIRUS (TIV) (INSECT 144-177 686-718 IRRIDESCENT VIRUS TYPE 1)PVM1_REOVD MINOR VIRION STRUCTURAL PROTEIN MU-2 REOVIRUS (TYPE 3/STRAINDEARING 280-318 324-361 PVM1_REOVL MINOR VIRION STRUCTURAL PROTEIN MU-2REOVIRUS (TYPE 1/STRAIN LANG) 280-318 PVM21_REOVD MAJOR VIRIONSTRUCTURAL PROTEIN REOVIRUS (TYPE 3/STRAIN DEARING) 168-199 MU-1/MU-1CPVM22_REOVD MAJOR VIRION STRUCTURAL PROTEIN REOVIRUS (TYPE 3/STRAINDEARING) 168-199 MU-1/MU-1C PVM2_REOVJ MAJOR VIRION STRUCTURAL PROTEINREOVIRUS (TYPE 2/STRAIN D5/JONES) 168-199 MU-1/MU-1C PVM2_REOVL MAJORVIRION STRUCTURAL PROTEIN REOVIRUS (TYPE 1/STRAIN LANG) 168-199MU-1/MU-1C PVM3_REOVD MAJOR NONSTRUCTURAL PROTEIN MU-NS REOVIRUS (TYPE3/STRAIN DEARING) 333-364 PVMAT_SV5 MATRIX PROTEIN SIMIAN VIRUS 5(STRAIN W3) (SV5) 308-342 PVMAT_TRTV MATRIX PROTEIN TURKEYRHINOTRACHEITIS VIRUS (TRTV) 122-150 PVME1_CVBM E1 GLYCOPROTEIN BOVINECORONAVIRUS (STRAIN MEBUS)  64-102 PVME1_CVHOC E1 GLYCOPROTEIN HUMANCORONAVIRUS (STRAIN OC43)  64-102 PVME1_CVMA5 E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN A59)  65-103 PVME1_CVMJH E1 GLYCOPROTEIN MURINECORONAVIRUS MHV (STRAIN JHM)  65-103 PVME1_CVTKE E1 GLYCOPROTEIN TURKEYENTERIC CORONAVIRUS (TCV)  64-102 PVME1_1BVB E1 GLYCOPROTEIN AVIANINFECTIOUS BRONCHITIS VIRUS  73-101 (STRAIN BEAUDETTE) (IBV) PVME1_1BVB2E1 GLYCOPROTEIN AVIAN INFECTIOUS BRONCHITIS VIRUS  73-101 (STRAINBEAUDETTE M42) (IBV) PVMEM_EBV PROBABLE MEMBRANE PROTEIN EPSTEIN-BARRVIRUS (STRAIN B95-8) 178-213 (HUMAN HERPESVIRUS 4) PVMP_CERV MOVEMENTPROTEIN CARNATION ETCHED RING VIRUS (CERV)  93-126 PVMP_SOCMV MOVEMENTPROTEIN SOYBEAN CHLOROTIC MOTTLE VIRUS 66-98 273-303 PVMSA_HPBDB MAJORSURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS (BROWN 201-238 269-302SHANGHAI DUCK ISOLATE S5) (DHBV) PVMSA_HPBDC MAJOR SURFACE ANTIGENPRECURSOR DUCK HEPATITIS B VIRUS 194-227 268-301 (STRAIN CHINA) (DHBV)PVMSA_HPBDU MAJOR SURFACE ANTIGEN PRECURSOR DUCK HEPATITIS B VIRUS(DHBV) 157-190 231-264 PVMSA_HPBDW MAJOR SURFACE ANTIGEN PRECURSOR DUCKHEPATITIS B VIRUS (WHITE 194-228 269-302 SHANGHAI DUCK ISOLATE S31)(DHBV) PVMSA_HPBGS MAJOR SURFACE ANTIGEN PRECURSOR GROUND SQUIRRELHEPATITIS VIRUS 209-243 271-307 (GSHV) PVMSA_HPBHE MAJOR SURFACE ANTIGENPRECURSOR HERON HEPATITIS B VIRUS 159-195 236-269 PVMSA_HPBV0 MAJORSURFACE ANTIGEN HEPATITIS B VIRUS 70-98 PVMSA_HPBV2 MAJOR SURFACEANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW2) 244-272 PVMSA_HPBV4MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADR4) 244-272PVMSA_HPBV9 MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPEADW/ 244-272 STRAIN 991) PVMSA_HPBVA MAJOR SURFACE ANTIGEN PRECURSORHEPATITIS B VIRUS (STRAIN ALPHA1) 233-261 PVMSA_HPBVD MAJOR SURFACEANTIGEN HEPATITIS B VIRUS (SUBTYPE AD) 70-98 PVMSA_HPBVI MAJOR SURFACEANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW/ 233-261 STRAININDONESIA/PIDW420) PVMSA_HPBVJ MAJOR SURFACE ANTIGEN PRECURSOR HEPATITISB VIRUS (SUBTYPE ADW/ 233-261 STRAIN JAPAN/PJDW233) PVMSA_HPBVL MAJORSURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (STRAIN LSH/ 233-261CHIMPANZEE ISOLATE) PVMSA_HPBVN MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS(SUBTYPE ADR/ 70-98 STRAIN NC-1) PVMSA_HPBVO MAJOR SURFACE ANTIGENPRECURSOR HEPATITIS B VIRUS (SUBTYPE ADW/ 233-261 STRAINOKINAWA/PODW282) PVMSA_HPBVP MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS BVIRUS (SUBTYPE ADW/ 244-272 STRAIN PHILIPPINO/PFDW294) PVMSA_HPBVR MAJORSURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPE ADR) 244-272PVMSA_HPBVS MAJOR SURFACE ANTIGEN HEPATITIS B VIRUS (SUBTYPE AR) 70-98PVMSA_HPBVW MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS B VIRUS (SUBTYPEADW) 233-261 PVMSA_HPBVY MAJOR SURFACE ANTIGEN PRECURSOR HEPATITIS BVIRUS (SUBTYPE AYW) 233-261 PVMSA_HPBVZ MAJOR SURFACE ANTIGEN PRECURSORHEPATITIS B VIRUS (SUBTYPE ADYW) 233-261 PVMSA_WHV1 MAJOR SURFACEANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 1 207-241 269-305PVMSA_WHV59 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCK HEPATITIS VIRUS 59212-246 274-310 PVMSA_WHV7 MAJOR SURFACE ANTIGEN PRECURSOR WOODCHUCKHEPATITIS VIRUS 7 212-246 274-310 PVMSA_WHV8 MAJOR SURFACE ANTIGENPRECURSOR WOODCHUCK HEPATITIS VIRUS 8 212-246 274-310 PVMSA_WHV81PROBABLE MAJOR SURFACE ANTIGEN WOODCHUCK HEPATITIS VIRUS 8 212-246274-305 PRECURSOR (INFECTIOUS CLONE) PVMSA_WHVW6 MAJOR SURFACE ANTIGENPRECURSOR WOODCHUCK HEPATITIS VIRUS W64 125-161 (ISOLATE PWS23)PVMT2_IAZH MATRIX (M2) PROTEIN INFLUENZA A VIRUS (STRAIN A/ 10-42SWINE/IOWA/15/30) PVMT8_MYXVL M-T8 PROTEIN MYXOMA VIRUS (STRAINLAUSANNE)  5-34 141-170 PVMT9_MYXVL MT-9 PROTEIN MYXOMA VIRUS (STRAINLAUSANNE) 246-282 PVN02_VACCC PROTEIN N2 VACCINIA VIRUS (STRAINCOPENHAGEN) 31-68 PVN02_VACCV PROTEIN N2 VACCINIA VIRUS (STRAIN WR)31-68 PVN02_VARV PROTEIN N2 VARIOLA VIRUS 31-68 PVN34_ROTPCNONSTRUCTURAL PROTEIN NS34 PORCINE ROTAVIRUS (GROUP C/ 336-366 STRAINCOWDEN) PVNCA_AAV2 DNA REPLICATION PROTEIN ADENO-ASSOCIATED VIRUS 2(AAV2) 163-196 365-401 PVNCS_PAVBO PROBABLE NONCAPSID PROTEIN NS1 BOVINEPARVOVIRUS (BPV) 180-217 346-377 439-471 PVNS1_AHSV4 NONSTRUCTURALPROTEIN NS1 AFRICAN HORSE SICKNESS VIRUS 351-380 (SEROTYPE 4/STRAINVACCINE) PVNS1_IAALA NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS 114-144(STRAIN A/ALASKA/6/77) PVNS1_IAANN NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS 114-144 (STRAIN A/ANN ARBOR/6/60) PVNS1_IACHI NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS 114-144 (STRAIN A/CHILE/1/83) PVNS1_IACKGNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144CHICKEN/GERMANY/N/49) PVNS1_IACKJ NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 104-141 CHICKEN/JAPAN/24) PVNS1_IADA2 NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 DUCK/ALBERTA/60/76)PVNS1_IADE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/104-141 DUCK/ENGLAND/1/56) PVNS1_IADU3 NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 104-141 DUCK/UKRAINE/1/63) PVNS1_IAFOMNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 114-144 FORTMONMOUTH/1/47) PVNS1_IAFOW NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS(STRAIN A/ 114-144 FORT WARREN/1/50) PVNS1_IAFPR NONSTRUCTURAL PROTEINNS1 INFLUENZA A VIRUS (STRAIN A/FOWL 107-144 PLAGUE VIRUS/ROSTOCK/34)PVNS1_IALE1 NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/114-144 LENINGRAD/134/57) PVNS1_IALEN NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 114-144 LENINGRAD/54/1) PVNS1_IAMA6NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144MALLARD/ALBERTA/88/76) PVNS1_IAMAN NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 107-144 MALLARD/NEW YORK/6750/78) PVNS1_IAMAONONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144MALLARD/NEW YORK/6874/78) PVNS1_IAMYN NONSTRUCTURAL PROTEIN NS1INFLUENZA A VIRUS (STRAIN A/ 104-141 MYNAH/HANEDA-THAI/76) PVNS1_IAPI0NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144PINTAIL/ALBERTA/119/79) PVNS1_IAPI1 NONSTRUCTURAL PROTEIN NS1 INFLUENZAA VIRUS (STRAIN A/ 107-144 PINTAIL/ALBERTA/121/79) PVNS1_IAPI2NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144PINTAIL/ALBERTA/268/78) PVNS1_IAP13 NONSTRUCTURAL PROTEIN NS1 INFLUENZAA VIRUS (STRAIN A/ 107-144 PINTAIL/ALBERTA/358/79) PVNS1_IAPUENONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 114-144 PUERTORICO/8/34) PVNS1_IATKB NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS(STRAIN A/ 107-144 TURKEY/BETHLEHEM-GLILIT/1492-B/82) PVNS1_IATKCNONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144TURKEY/CANADA/63) PVNS1_IATRS NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 104-141 TERN/SOUTH AFRICA/61) PVNS1_IATRT NONSTRUCTURALPROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 TERN/TURKMENIA/18/72)PVNS1_IAUDO NONSTRUCTURAL PROTEIN NS1 INFLUENZA A VIRUS (STRAIN A/114-144 UDORN/307/72) PVNS1_IAUSS NONSTRUCTURAL PROTEIN NS1 INFLUENZA AVIRUS (STRAIN A/ 114-144 USSR/90/77) PVNS1_IAZI1 NONSTRUCTURAL PROTEINNS1 INFLUENZA A VIRUS (STRAIN A/ 107-144 SWINE/IOWA/15/30 PVNS1_INBPANONSTRUCTURAL PROTEIN NS1 INFLUENZA B VIRUS (STRAIN B/PA/79) 266-295PVNS1_INCAA NONSTRUCTURAL PROTEIN NS1 INFLUENZA C VIRUS (STRAIN C/222-255 ANN ARBOR/1/50) PVNS1_INCCA NONSTRUCTURAL PROTEIN NS1 INFLUENZAC VIRUS (STRAIN C/ 222-255 CALIFORNIA/78) PVNS2_HRSV1 NONSTRUCTURALPROTEIN 2 HUMAN RESPIRATORY SYNCYTIAL VIRUS 20-49 (SUBGROUP B/STRAIN18537) PVNS2_HRSVA NONSTRUCTURAL PROTEIN 2 HUMAN RESPIRATORY SYNCYTIALVIRUS 20-49 (STRAIN A2) PVNS2_INBLE NONSTRUCTURAL PROTEIN NS2 INFLUENZAB VIRUS (STRAIN B/LEE/40 48-77 PVNS2_INBYA NONSTRUCTURAL PROTEIN NS2INFLUENZA B VIRUS (STRAIN B/ 48-77 YAMAGATA/1/73) PVNS4_CVMSNONSTRUCTURAL PROTEIN 4 MURINE CORONAVIRUS MHV (STRAIN S) 17-45PVNS4_CVPFS NONSTRUCTURAL PROTEIN 4 PORCINE TRANSMISSIBLE  4-34GASTROENTERITIS CORONAVIRUS (STRAIN FS77 PVNS4_CVPPU NONSTRUCTURALPROTEIN 4 PORCINE TRANSMISSIBLE  4-39 GASTROENTERITIS CORONAVIRUS(STRAIN PUR PVNS4_CVPRM NONSTRUCTURAL PROTEIN 4 PORCINE REPIRATORYCORONAVIRUS  4-39 PVNST_CVMA5 30 KD NONSTRUCTURAL PROTEIN MURINECORONAVIRUS MHV (STRAIN A59) 45-80 PVNST_CVMJH 30 KD NONSTRUCTURALPROTEIN MURINE CORONAVIRUS MHV (STRAIN JHM) 49-84 PVNST_INCGLNONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/ 222-255GREAT LAKES/1167/54) PVNST_INCH NONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZAC VIRUS (STRAIN C/ 222-255 JOHANNESBURG/1/66) PNVST_INCMI NONSTRUCTURALPROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/ 222-255 MISSISSIPPI/80)PVNST_INCYA NONSTRUCTURAL PROTEINS NS1-NS2 INFLUENZA C VIRUS (STRAIN C/222-255 YAMAGATA/10/81) PVNUA_PRVKA PROBABLE NUCLEAR ANTIGENPSEUDORABIES VIRUS 756-784 (STRAIN KAPLAN) (PRV) PVNUC_DHVHNUCLEOPROTEIN DHORI VIRUS (STRAIN INDIAN/1313/61) 297-331 441-470 (DHO)PVNUC_IACKP NUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 354-388CHICKEN/PENNSYLVANIA/1/83) PVNUC_IAHLO NUCLEOPROTEIN INFLUENZA A VIRUS(STRAIN A/ 354-388 EQUINE/LONDON/1416/73) PVNUC_IAHPR NUCLEOPROTEININFLUENZA A VIRUS (STRAIN A/ 354-388 EQUINE/PRAGUE/1/56) PVNUC_IAHTENUCLEOPROTEIN INFLUENZA A VIRUS (STRAIN A/ 354-388EQUINE/TENNESSEE/5/86) PVNUC_MABVM NUCLEOPROTEIN MARBURG VIRUS (STRAINMUSOKE) 16-46 PVNUC_MABVP NUCLEOPROTEIN MARBURG VIRUS (STRAIN POPP)16-46 PVO01_VACCC PROTEIN O1 VACCINIA VIRUS (STRAIN COPENHAGEN) 511-539550-581 PVO01_VARV PROTEIN O1 VARIOLA VIRUS 511-539 PVOR1_NMV 186 KDPROTEIN NARCISSUS MOSAIC VIRUS (NMV) 121-150 641-671 PVOR1_PVMR 223 KDPROTEIN POTATO VIRUS M (STRAIN RUSSIAN) (PVM) 1667-1703 PVOR1_SMYEA 150KD PROTEIN STRAWBERRY MILD YELLOW EDGE- 121-153 ASSOCIATED VIRUS(SMYEAV) PVP03_HSVSA PROBABLE MEMBRANE ANTIGEN 3 HERPESVIRUS SAIMIRI(STRAIN 11) 462-493 PVP10_NPVAC P10 PROTEIN AUTOGRAPHA CALIFORNICANUCLEAR  4-38 POLYHEDROSIS VIRUS (ACMNPV) PVP10_NPVOP P10 PROTEIN ORGYIAPSEUDOTSUGATA MULTICAPSID  4-38 POLYHEDROSIS VIRUS (OPMNPV) PVP10_RBSDVPROTEIN S10 RICE BLACK STREAKED DWARF VIRUS 260-291 (RBSDV) PVP19_HSVEBCAPSID ASSEMBLY AND DNA EQUINE HERPESVIRUS TYPE 1 239-268 287-325MATURATION PROTEIN (STRAIN AB4P) (EHV-1) PVP23_HCMVA PROBABLE CAPSIDPROTEIN VP23 HUMAN CYTOMEGALOVIRUS 141-172 (STRAIN AD169) PVP23_HSV6UPROBABLE CAPSID PROTEIN VP23 HERPES SIMPLEX VIRUS 46-79 206-238 (TYPE6/STRAIN UGANDA-1102) PVP23_HSVEB PROBABLE CAPSID PROTEIN VP23 EQUINEHERPESVIRUS TYPE 1 18-48 (STRAIN AB4P) (EHV-1) PVP23_VZVD PROBABLECAPSID PROTEIN VP23 VARICELLA-ZOSTER VIRUS 224-253 (STRAIN DUMAS) (VZV)PVP2_AHSV4 OUTER CAPSID PROTEIN VP2 AFRICAN HORSE SICKNESS VIRUS 408-441(SEROTYPE 4/STRAIN VACCINE) PVP2_BTV10 OUTER CAPSID PROTEIN VP2BLUETONGUE VIRUS (SEROTYPE 10/ 649-683 ISOLATE USA) PVP2_BTV11 OUTERCAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 11/ 558-586 649-683ISOLATE USA) PVP2_BTV17 OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS(SEROTYPE 17/ 391-424 564-593 ISOLATE USA) PVP2_BTV1A OUTER CAPSIDPROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/ 654-688 ISOLATE AUSTRALIA)PVP2_BTV1S OUTER CAPSID PROTEIN VP2 BLUETONGUE VIRUS (SEROTYPE 1/654-688 ISOLATE SOUTH AFRICA) PVP2_EHDV1 OUTER CAPSID PROTEIN VP2EPIZOOTIC HEMORRHAGIC DISEASE 878-915 VIRUS (SEROTYPE 1) (EHDV-1)PVP2_ROTBR RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN RF) 334-367522-557 PVP2_ROTBU RNA-BINDING PROTEIN VP2 BOVINE ROTAVIRUS (STRAIN UK)334-367 523-558 PVP2_ROTHW RNA-BINDING PROTEIN VP2 HUMAN ROTAVIRUS(SEROTYPE 1/ 342-377 532-567 STRAIN WA) PVP2_ROTPC RNA-BINDING PROTEINVP2 PORCINE ROTAVIRUS (GROUP C/ 514-549 589-617 811-841 STRAIN COWDEN)PVP2_ROTS1 RNA-BINDING PROTEIN VP2 SIMIAN 11 ROTAVIRUS (STRAIN SA11)335-368 523-558 PVP35_VACCC IMMUNODOMINANT ENVELOPE VACCINIA VIRUS(STRAIN COPENHAGEN) 278-311 PROTEIN P35 PVP35_VACCV IMMUNODOMINANTENVELOPE VACCINIA VIRUS (STRAIN WR) 278-311 PROTEIN P35 PVP35_VARVIMMUNODOMINANT ENVELOPE VARIOLA VIRUS 279-312 PROTEIN P35 PVP39_NPVOPMAJOR CAPSID PROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 107-141POLYHEDROSIS VIRUS (OPMNPV) PVP3_EHDV1 VP3 CORE PROTEIN EPIZOOTICHEMORRHAGIC DISEASE 383-412 734-770 VIRUS (SEROTYPE 1) (EHDV-1)PVP3_EHDVA VP3 CORE PROTEIN EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 383-412734-770 PVP3_RDV MAJOR 114 KD STRUCTURAL PROTEIN RICE DWARF VIRUS (RDV)297-330 PVP3_ROTS1 INNER CORE PROTEIN VP3 SIMIAN 11 ROTAVIRUS (STRAINSA11) 652-688 PVP40_EBV CAPSID PROTEIN P40 EPSTEIN-BARR VIRUS (STRAINB95-8) 429-457 (HUMAN HERPESVIRUS 4) PVP40_HSVSA CAPSID PROTEIN P40HERPESVIRUS SAIMIRI (STRAIN 11 119-152 PVP40_ILTVT CAPSID PROTEIN P40INFECTIOUS LARYNGOTRACHEITIS VIRUS  84-119 (STRAIN THORNE V882) (ILTV)PVP40_VZVD CAPSID PROTEIN P40 VARICELLA-ZOSTER VIRUS 485-516 (STRAINDUMAS) (VZV PVP47_NPVAC VIRAL TRANSCRIPTION REGULATOR P47 AUTOGRAPHACALIFORNICA NUCLEAR 239-270 POLYHEDROSIS VIRUS (ACMNPV) PVP4A_VACCCMAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS (STRAIN COPENHAGEN)553-591 PVP4A_VACCV MAJOR CORE PROTEIN P4A PRECURSOR VACCINIA VIRUS(STRAIN WR) 553-591 PVP4A_VARV MAJOR CORE PROTEIN P4A PRECURSOR VARIOLAVIRUS 554-592 PVP4_ROTG1 OUTER CAPSID PROTEIN VP4 ROTAVIRUS (GROUPB/STRAIN IDIR)  93-122 468-499 PVP4_WTV NONSTRUCTURAL PROTEIN PNS4 WOUNDTUMOR VIRUS (WTV) 278-308 624-659 PVP5_BRD OUTER CAPSID PROTEIN VP5BROADHAVEN VIRUS (BRD)  96-133 295-326 PVP5_BTVIA OUTER CAPSID PROTEINVP5 BLUETONGUE VIRUS (SEROTYPE 1/ 295-324 ISOLATE AUSTRALIA) PVP5_BTV1OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS (SEROTYPE 1/ 295-324 ISOLATESOUTH AFRICA) PVP5_BTV2A OUTER CAPSID PROTEIN VP5 BLUETONGUE VIRUS(SEROTYPE 2/ 295-324 ISOLATE USA) PVP5_EHDV1 OUTER CAPSID PROTEIN VP5EPIZOOTIC HEMORRHAGIC DISEASE VIRUS 290-325 (SEROTYPE 1) (EHDV-1)PVP5_WTV OUTER COAT PROTEIN P5 WOUND TUMOR VIRUS (WTV) 691-719PVP61_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ 159-187 ISOLATEUSA) PVP62_BTV10 VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 10/ 155-183210-245 ISOLATE USA) PVP62_MRDV PROBABLE NONSTRUCTURAL 36.3 KD MAIZEROUGH DWARF VIRUS (MRDV) 25-61 222-257 PROTEIN PVP64_NPVOP MAJORENVELOPE GLYCOPROTEIN ORGYIA PSEUDOTSUGATA MULTICAPSID 285-313 PRECURSORPOLYHEDROSIS VIRUS (OPMNPV) PVP67_NPVAC MAJOR ENVELOPE GLYCOPROTEINAUTOGRAPHA CALIFORNICA NUCLEAR 281-316 PRECURSOR POLYHEDROSIS VIRUS(ACMNPV) PVP67_NPVGM MAJOR ENVELOPE GLYCOPROTEIN GALLERIA MELLONELLANUCLEAR 198-233 POLYHEDROSIS VIRUS (GMNPV) PVP6_BTV11 VP6 PROTEINBLUETONGUE VIRUS (SEROTYPE 11/ 155-183 ISOLATE USA) PVP6_BTV17 VP6PROTEIN BLUETONGUE VIRUS (SEROTYPE 1/ 155-183 ISOLATE USA) PVP6_BTV1SVP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 17/ 159-187 ISOLATE SOUTH AFRICA)PVP6_BTV2A VP6 PROTEIN BLUETONGUE VIRUS (SEROTYPE 2/ 131-159 ISOLATEUSA) PVP6_WTV STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (WTV) 180-209PVP6_WTVNJ STRUCTURAL PROTEIN P6 WOUND TUMOR VIRUS (STRAIN NJ) (WTV)180-209 PVP79_NPVAC 79 KD PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 405-442POLYHEDROSIS VIRUS (ACMNPV) PVP7_WTV NONSTRUCTURAL PROTEIN PNS7 WOUNDTUMOR VIRUS (WTV) 454-490 PVP87_NPVOP CAPSID PROTEIN P87 ORGYIAPSEUDOTSUGATA MULTICAPSID  77-112 POLYHEDROSIS VIRUS (OPMNPV) PVP8_BTV10NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 104-139 (SEROTYPE 10/ISOLATEUSA) PVP8_BTV11 NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 104-139(SEROTYPE 11/ISOLATE USA) PVP8_BTV13 NONSTRUCTURAL PROTEIN P8 BLUETONGUEVIRUS 104-139 (SEROTYPE 13/ISOLATE USA) PVP8_BTV17 NONSTRUCTURAL PROTEINP8 BLUETONGUE VIRUS 104-139 (SEROTYPE 17/ISOLATE USA) PVP8_BTV1ANONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 104-139 (SEROTYPE 1/ISOLATEAUSTRALIA) PVP8_BTV1S NONSTRUCTURAL PROTEIN P8 BLUETONGUE VIRUS 104-139(SEROTYPE 1/ISOLATE SOUTH AFRICA) PVP8_BTV2A NONSTRUCTURAL PROTEIN P8BLUETONGUE VIRUS 104-139 (SEROTYPE 2/ISOLATE USA) PVP8_RDV OUTER CAPSIDPROTEIN P8 RICE DWARF VIRUS (RDV) 374-412 PVP8_WTV OUTER CAPSID PROTEINP8 WOUND TUMOR VIRUS (WTV) 164-195 379-412 PVPHE_NPVAC 29 KD POLYHEDRALENVELOPE PROTEIN AUTOGRAPHA CALIFORNICA NUCLEAR 145-173 POLYHEDROSISVIRUS (ACMNPV) PVPHE_NPVOP 32 KD POLYHEDRAL ENVELOPE PROTEIN ORGYIAPSEUDOTSUGATA MULTICAPSID 122-151 POLYHEDROSIS VIRUS (OPMNPV) PVPR_HV1A2VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 37-74 (ARV2/SF2 ISOLATE)(HIV-1) PVPR_HV2BE VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73(ISOLATE BEN) (HIV-2) PVPR_HV2CA VPR PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 2 41-73 (ISOLATE CAM2) (HIV-2) PVPR_HV2D1 VPR PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE D194) (HIV-2) PVPR_HV2D2VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE D205,7)(HIV-2) PVPR_HV2NZ VPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 41-73(ISOLATE NIH-Z) (HIV-2) PVPR_HV2RO VPR PROTEIN HUMAN IMMUNODEFICIENCYVIRUS TYPE 2 41-73 (ISOLATE ROD) (HIV-2) PVPR_HV2SB VPR PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 2 41-73 (ISOLATE SBLISY) (HIV-2) PVPR_HV2STVPR PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 40-72 (ISOLATE ST)(HIV-2) PVPR_SIVCZ VPR PROTEIN CHIMPANZEE IMMUNODEFICIENCY VIRUS 37-74(SIV(CPZ)) (CIV) PVPR_SIVMI VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS37-69 (MM142-83 ISOLATE) (SIV-MAC) PVPR_SIVMK VPR PROTEIN SIMIANIMMUNODEFICIENCY VIRUS 37-69 (K6W ISOLATE) (SIV-MAC) PVPR_SIVML VPRPROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 37-69 (K78 ISOLATE) (SIV-MAC)PVPR_SIVS4 VPR PROTEIN SIMIAN IMMUNODEFICIENCY VIRUS 37-69 (F236/SMH4ISOLATE) (SOOTY MANGA PVPR_SIVSP VPR PROTEIN SIMIAN IMMUNODEFICIENCYVIRUS 37-69 (PBJ/BC13 ISOLATE) (SOOTY MANGABE PVPU_HV1B1 VPU PROTEINHUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-33 (BH10 ISOLATE, HXB3 ISOLATE)PVPU_HV1B8 VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-33 (BH8ISOLATE) (HIV-1) PVPU_HV1BN VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1  3-34 (BRAIN ISOLATE) (HIV-1) PVPU_HV1BR VPU PROTEIN HUMANIMMUNODEFICIENCY VIRUS TYPE 1  3-33 (BRU ISOLATE) (HIV-1) PVPU_HVH12 VPUPROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  4-33 (HXB2 ISOLATE) (HIV-1)PVPU_HVIJR VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUS TYPE 1  3-34 (JRCSFISOLATE) (HIV-1) PVPU_HVIPV VPU PROTEIN HUMAN IMMUNODEFICIENCY VIRUSTYPE 1  3-33 (PV22 ISOLATE) (HIV-1) PVPU_JSRV VPU PROTEIN SHEEPPULMONARY ADENOMATOSIS VIRUS 116-154 PVPX_LDV VPX PROTEIN LACTATEDEHYDROGENASE-ELEVATING 25-55 VIRUS (LDV) PVPY_BIV2 ORF-Y PROTEIN BOVINEIMMUNODEFICIENCY VIRUS 35-71 (ISOLATE 127) (BIV) PVRNA_BSMV ALPHA-APROTEIN BARLEY STRIPE MOSAIC VIRUS (BSMV) 290-319 676-705 PVS05_ROTH1NONSTRUCTURAL PROTEIN NCVP2 HUMAN ROTAVIRUS (STRAIN IGV-80-3) 198-230PVS05_ROTPC NONSTRUCTURAL PROTEIN NS53 PORCINE ROTAVIRUS (GROUP C/ 88-119 358-392 STRAIN COWDEN) PVS05_ROTS1 NONSTRUCTURAL PROTEIN NCVP2SIMIAN 11 ROTAVIRUS (STRAIN SA11) 315-347 PVS06_ROTBR VP6 PROTEIN BOVINEROTAVIRUS (STRAIN RF) 55-92 PVS06_ROTBS VP6 PROTEIN BOVINE ROTAVIRUS(GROUP C/ 64-92 312-340 STRAIN SHINTOKU) PVS06_ROTBU VP6 PROTEIN BOVINEROTAVIRUS (STRAIN UK) 55-92 PVS06_ROTEF VP6 PROTEIN EQUINE ROTAVIRUS(STRAIN FI-14) 55-92 PVS06_ROTEH VP6 PROTEIN EQUINE ROTAVIRUS (STRAINH-2) 55-92 PVS06_ROTH1 VP6 PROTEIN HUMAN ROTAVIRUS (SEROTYPE 1/ 55-92STRAIN 1076) PVS06_ROTHC VP6 PROTEIN HUMAN ROTAVIRUS (GROUP C/ 64-92312-340 STRAIN BRISTOL) PVS06_ROTHS VP6 PROTEIN HUMAN ROTAVIRUS(SEROTYPE 2/ 55-92 STRAIN S2) PVS06_ROTHW VP6 PROTEIN HUMAN ROTAVIRUS(SEROTYPE 1/ 55-92 313-349 STRAIN WA) PVS06_ROTPC VP6 PROTEIN PORCINEROTAVIRUS (GROUP C/ 64-92 STRAIN COWDEN) PVS06_ROTPG VP6 PROTEIN PORCINEROTAVIRUS (STRAIN GOTTFRIED) 55-92 313-349 PVS06_ROTS1 VP6 PROTEINSIMIAN 11 ROTAVIRUS (STRAIN SA11) 55-92 313-349 PVS08_ROTS1NONSTRUCTURAL PROTEIN NCVP4 SIMIAN 11 ROTAVIRUS (STRAIN SA11) 274-302PVS09_ROTHT GLYCOPROTEIN VP7 HUMAN ROTAVIRUS (SEROTYPE 4/ 131-159 STRAINST. THOMAS 3) PVS09_ROTPB GLYCOPROTEIN VP7 PORCINE ROTAVIRUS (SEROTYPE4/ 131-159 STRAIN BEN-144) PVS10_ROTBN NONSTRUCTURAL GLYCOPROTEIN NCVP5BOVINE ROTAVIRUS (STRAIN NCDV) 52-89 PVS10_ROTBU NONSTRUCTURALGLYCOPROTEIN NCVP5 BOVINE ROTAVIRUS (STRAIN UK) 52-89 PVS10_ROTH2NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAIN A28) 52-89PVS10_ROTH7 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (STRAINA64/ 52-89 CLONE 2) PVS10_ROTH8 NONSTRUCTURAL GLYCOPROTEIN NCVP5 HUMANROTAVIRUS (STRAIN A64/ 52-89 CLONE 6 PSV10_ROTHW NONSTRUCTURALGLYCOPROTEIN NCVP5 HUMAN ROTAVIRUS (SEROTYPE 1/ 52-89 STRAIN WA)PVS10_ROTS1 NONSTRUCTURAL GLYCOPROTEIN NCVP5 SIMIAN 11 ROTAVIRUS (STRAINSA11) 52-89 PVS11_ROTHW MINOR OUTER CAPSID PROTEIN HUMAN ROTAVIRUS(SEROTYPE 1/  99-130 STRAIN WA) PVS11_REOVJ SIGMA 1 PROTEIN PRECURSORREOVIRUS (TYPE 2/ 346-384 STRAIN D5/JONES) PVS11_REOVL SIGMA 1 PROTEINPRECURSOR REOVIRUS (TYPE 1/STRAIN LANG) 110-147 PVT1_SFVKA PROTEIN T1PRECURSOR SHOPE FIBROMA VIRUS 147-182 (STRAIN KASZA) (SFV) PVT2_MYXVLTUMOR NECROSIS FACTOR SOLUBLE MYXOMA VIRUS (STRAIN LAUSANNE) 261-290RECEPTOR PRECUR PVT2_SFVKA TUMOR NECROSIS FACTOR SOLUBLE SHOPE FIBROMAVIRUS 211-249 RECEPTOR PRECUR (STRAIN KASZA) (SFV) PVT3A_CAPV1 PROTEINT3A CAPRIPOXVIRUS (STRAIN INS-1) 116-150 PVTER_EBV PROBABLE DNAPACKAGING PROTEIN EPSTEIN-BARR VIRUS 166-199 505-543 (STRAIN B95-8)(HUMAN HERPESVIRUS 4) PVTER_HCMVA PROBABLE DNA PACKAGING PROTEIN HUMANCYTOMEGALOVIRUS 176-209 (STRAIN AD169) PVTER_HSV11 PROBABLE DNAPACKAGING PROTEIN ICTALURID HERPESVIRUS 1 756-788 (CHANNEL CATFISHVIRUS) (CCV) PVX_SEND6 X PROTEIN SENDAI VIRUS (STRAIN 6/94) 57-93PY104_ADE07 HYPOTHETICAL 10.4 KD EARLY PROTEIN HUMAN ADENOVIRUS TYPE 755-83 PY10K_MSVS HYPOTHETICAL 10.9 KD PROTEIN MAIZE STREAK VIRUS 24-54(SOUTH-AFRICAN ISOLATE) (MSV) PY10K_WDV HYPOTHETICAL 10 KD PROTEIN WHEATDWARF VIRUS (WDV) 22-59 PY119_SSV1 HYPOTHETICAL 11.9 KD PROTEINSULFOLOBUS VIRUS-LIKE PARTICLE SSV1 29-64 PY11K_PASV HYPOTHETICAL 11.9KD PROTEIN (ORF VI) PANICUM STREAK VIRUS 29-61 PY11K_ROTS1 HYPOTHETICAL11 KD PROTEIN IN SIMIAN 11 ROTAVIRUS (STRAIN SA11) 53-87 SEGMENT S11PY11K_TYDVA HYPOTHETICAL 11.2 KD PROTEIN TOBACCO YELLOW DWARF VIRUS28-62 (STRAIN AUSTRALIA) (TYDV) PY14K_NPVAC HYPOTHETICAL 13.8 KD PROTEININ AUTOGRAPHA CALIFORNICA NUCLEAR  65-101 39 KD PROTEIN 5′REGPOLYHEDROSIS VIRUS (ACMNPV) PY18K_SSV1 HYPOTHETICAL 18.0 KD PROTEINSULFOLOBUS VIRUS-LIKE PARTICLE SSV1 100-132 (ORF B-166) PY20K_SSV1HYPOTHETICAL 20.4 KD PROTEIN SULFOLOBUS VIRUS-LIKE PARTICLE SSV1 129-167(ORF E-178) PY21K_MSVN HYPOTHETICAL 21.7 KD PROTEIN MAIZE STREAK VIRUS122-155 (NIGERIAN ISOLATE) (MSV) PY2_SOCMV HYPOTHETICAL PROTEIN 2 (ORF11) SOYBEAN CHLOROTIC MOTTLE VIRUS  99-137 PY38K_NPVAC HYPOTHETICAL 37.7KD PROTEIN (ORF2) AUTOGRAPHA CALIFORNICA NUCLEAR 250-282 POLYHEDROSISVIRUS (ACMNPV) PY85K_SSV1 HYPOTHETICAL 85.7 KD PROTEIN SULFOLOBUSVIRUS-LIKE PARTICLE SSV1 274-312 543-580 (ORF C-792) PYB13_FOWPMHYPOTHETICAL BAMHI-ORF13 PROTEIN FOWLPOX VIRUS (ISOLATE 114-150(FRAGMENT) HP-438[MUNICH]) PYDH1_HSVSC HYPOTHETICAL 28.7 KD PROTEIN INHERPESVIRUS SAIMIRI (SUBGROUP 206-244 DHFR 3′REGION (ORF C/STRAIN 488)PYDH3_HSVSC HYPOTHETICAL 9.5 KD PROTEIN IN HERPESVIRUS SAIMIRI (SUBGROUP69-97 DHFR 3′REGION (ORF3) C/STRAIN 488) PYEC4_EBV HYPOTHETICAL EC-RF4PROTEIN EPSTEIN-BARR VIRUS 34-68 (STRAIN B95-8) (HUMAN HERPESVIRUS 4)PYIO1_CVBM HYPOTHETICAL PROTEIN IORF1 BOVINE CORONAVIRUS  84-122PYIOR_CVBF HYPOTHETICAL PROTEIN IN BOVINE CORONAVIRUS (STRAIN F15) 41-75137-165 NUCLEOCAPSID ORF (IORF) PYIOR_CVBM HYPOTHETICAL PROTEIN INBOVINE CORONAVIRUS (STRAIN MEBUS) 41-74 137-165 NUCLEOCAPSID ORF (IORF)PYIOR_CVTKE HYPOTHETICAL PROTEIN IN TURKEY ENTERIC CORONAVIRUS (TCV)41-74 137-165 NUCLEOCAPSID ORF (IORF) PYKR2_EBV HYPOTHETICAL BKRF2PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8)  67-100 (HUMAN HERPESVIRUS 4)PYMR2_EBV BMRF2 PROTEIN EPSTEIN-BARR VIRUS (STRAIN B95-8) 250-284 (HUMANHERPESVIRUS 4) PYOR1_COYMV HYPOTHETICAL 23 KD PROTEIN (ORF1) COMMELINAYELLOW MOTTLE VIRUS  93-130 166-198 (COYMV) PYOR2_COYMV HYPOTHETICAL 15KD PROTEIN (ORF2) COMMELINA YELLOW MOTTLE VIRUS 23-56 (COYMV)PYOR3_PVXXC HYPOTHETICAL 12 KD PROTEIN (ORF3) POTATO VIRUS X (STRAIN XC)(PVX)  7-39 (FRAGMENT) PYOR3_WCMVM HYPOTHETICAL 13 KD PROTEIN (ORF 3)WHITE CLOVER MOSAIC VIRUS 63-94 (STRAIN M) (WCMV) PYOR3_WCMVOHYPOTHETICAL 13 KD PROTEIN (ORF 3) WHITE CLOVER MOSAIC VIRUS 64-95(STRAIN O) (WCMV) PYOR5_ADEG1 HYPOTHETICAL 31.5 KD PROTEIN (ORF 5) AVIANADENOVIRUS GAL1 237-272 PYORG_TTV1 HYPOTHETICAL 7.1 KD PROTEINTHERMOPROTEUS TENAX VIRUS  5-34 1 (STRAIN KRA1) (TTV1) PYORM_TTV1HYPOTHETICAL 38.6 KD PROTEIN THERMOPROTEUS TENAX VIRUS 233-263 1 (STRAINKRA1) (TTV1) PYORP_TTV1 HYPOTHETICAL 20.2 KD PROTEIN THERMOPROTEUS TENAXVIRUS  91-124 1 (STRAIN KRA1) (TTV1) PYP24_RTBV HYPOTHETICAL P24 PROTEIN(ORF 1 RICE TUNGRO BACILLIFORM VIRUS (RTBV) 104-133 159-191 PVP24_RTBVPHYPOTHETICAL P24 PROTEIN (ORF 1) RICE TUNGRO BACILLIFORM VIRUS 104-133159-191 (ISOLATE PHILIPPINES) (RTBV) PYP47_NPVAC HYPOTHETICAL 43.5 KDPROTEIN IN AUTOGRAPHA CALIFORNICA NUCLEAR 23-51 P43 3′REGIONPOLYHEDROSIS VIRUS (ACMNPV) PYRF5_HSV6G HYPOTHETICAL PROTEIN RF5 HERPESSIMPLEX VIRUS (TYPE 6/STRAIN GS) 180-216 PYRR2_EBV HYPOTHETICAL BRRF2PROTEIN EPSTEIN-BARR VIRUS (STRAIN 13-42 B95-8) (HUMAN HERPESVIRUS 4)PYSR1_EBV HYPOTHETICAL BSRF1 PROTEIN EPSTEIN-BARR VIRUS (STRAIN  92-120B95-8) (HUMAN HERPESVIRUS 4) PYTR1_EBV HYPOTHETICAL BTRF1 PROTEINEPSTEIN-BARR VIRUS (STRAIN 306-336 B95-8) (HUMAN HERPESVIRUS 4)PYVAE_VACCC HYPOTHETICAL 18.2 KD PROTEIN VACCINIA VIRUS (STRAINCOPENHAGEN) 21-53 PYVAL_VACCV HYPOTHETICAL 9.9 KD PROTEIN VACCINIA VIRUS(STRAIN WR), AND VACCINIA VIRUS (STRAIN COPENHAGE 21-49 PYVBC_VACCCHYPOTHETICAL 10.8 KD PROTEIN VACCINIA VIRUS 22-53 (STRAIN COPENHAGEN)PYVDG_VACCV HYPOTHETICAL 10.4 KD PROTEIN VACCINIA VIRUS (STRAIN WR), AND31-64 VACCINIA VIRUS (STRAIN COPENHAGE PYVEF_VACCC HYPOTHETICAL 12.9 KDPROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  8-42 PYVFC_VACCCHYPOTHETICAL 11.6 KD PROTEIN VACCINIA VIRUS (STRAIN COPENHAGEN)  7-35PZNFP_LYCVA ZINC FINGER PROTEIN LYMPHOCYTIC CHORIOMENINGITIS 29-57 VIRUS(STRAIN ARMSTRONG) PZNFP_LYCVP ZINC FINGER PROTEIN (FRAGMENT)LYMPHOCYTIC CHORIOMENINGITIS  8-32 VIRUS (STRAIN PASTEUR)

TABLE XV RESPIRATORY SYNCYTIAL VIRUS DP107 F2 REGION ANALOG CARBOXYTRUNCATIONS X-YTS-Z (SEQ ID NO:16) X-YTSV-Z X-YTSVI-Z X-YTSVIT-ZX-YTSVITI-Z X-YTSVITIE-Z X-YTSVITIEL-Z X-YTSVITIELS-Z X-YTSVITIELSN-ZX-YTSVITIELSNI-Z X-YTSVITIELSNIK-Z X-YTSVITIELSNIKE-ZX-YTSVITIELSNIKEN-Z X-YTSVITIELSNIKENK-Z X-YTSVITIELSNIKENKC-ZX-YTSVITIELSNIKENKCN-Z X-YTSVITIELSNIKENKCNG-Z X-YTSVITIELSNIKENKCNGT-ZX-YTSVITIELSNIKENKCNGTD-Z X-YTSVITIELSNIKENKCNGTDA-ZX-YTSVITIELSNIKENKCNGTDAK-Z X-YTSVITIELSNIKENKCNGTDAKV-ZX-YTSVITIELSNIKENKCNGTDAKVK-Z X-YTSVITIELSNIKENKCNGTDAKVKL-ZX-YTSVITIELSNIKENKCNGTDAKVKLI-Z X-YTSVITIELSNIKENKCNGTDAKVKLIK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQ-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQE-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQEL-Z X-YTSVITIELSNIKENKCNGTDAKVKLIKQELD-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKY-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYK-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVT-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTE-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTEL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQ-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLL-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLM-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQ-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQS-ZX-YTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQST-Z The one letteramino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxycarbonyl (FMOC) group; a macromolecularcarrier group. including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVI RESPIRATORY SYNCYTIAL VIRUS F2 DP178/DP107 REGION ANALOG AMINOTRUNCATIONS X-QST-Z X-M Q S T-Z X-L M Q S T-Z X-L L M Q S T-ZX-Q L L M Q S T-Z X-L Q L L M Q S T-Z X-E L Q L L M Q S T-ZX-T E L Q L L M Q S T-Z X-V T E L Q L L M Q S T-ZX-A V T E L Q L L M Q S T-Z X-N A V T E L Q L L M Q S T-ZX-K N A V T E L Q L L M Q S T-Z X-Y K N A V T E L Q L L M Q S T-ZX-K Y K N A V T E L Q L L M Q S T-ZX-D K Y K N A V T E L Q L L M Q S T-ZX-L D K Y K N A V T E L Q L L M Q S T-ZX-E L D K Y K N A V T E L Q L L M Q S T-ZX-Q E L D K Y K N A V T E L Q L L M Q S T-ZX-K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-T I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-I T I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-V I T I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-S V I T I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZX-T S V I T I E L S N I K E N K C N G T D A K V K L I K Q E L D K Y K N A V T E L Q L L M Q S T-ZThe one letter amino acid code is used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG CARBOXYTRUNCATIONS X-FYD-Z X-FYDP-Z X-FYDPL-Z X-FYDPLV-Z X-FYDPLVF-ZX-FYDPLVFP-Z X-FYDPLVFPS-Z X-FYDPLVFPSD-Z X-FYDPLVFPSDE-ZX-FYDPLVFPSDEF-Z X-FYDPLVFPSDEFD-Z X-FYDPLVFPSDEFDA-ZX-FYDPLVFPSDEFDAS-Z X-FYDPLVFPSDEFDASI-Z X-FYDPLVFPSDEFDASIS-ZX-FYDPLVFPSDEFDASISQ-Z X-FYDPLVFPSDEFDASISQV-Z X-FYDPLVFPSDEFDASISQVN-ZX-FYDPLVFPSDEFDASISQVNE-Z X-FYDPLVFPSDEFDASISQVNEK-ZX-FYDPLVFPSDEFDASISQVNEKI-Z X-FYDPLVFPSDEFDASISQVNEKIN-ZX-FYDPLVFPSDEFDASISQVNEKINQ-Z X-FYDPLVFPSDEFDASISQVNEKINQS-ZX-FYDPLVFPSDEFDASISQVNEKINQSL-Z X-FYDPLVFPSDEFDASISQVNEKINQSLA-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAF-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFI-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIR-Z X-FYDPLVFPSDEFDASISQVNEKINQSLAFIRK-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKS-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSD-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDE-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL-ZX-FYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XVIII RESPIRATORY SYNCYTIAL VIRUS F1 DP178 REGION ANALOG AMINOTRUNCATIONS X-DELL-Z X-SDELL-Z X-KSDELL-Z X-RKSDELL-Z X-IRKSDELL-ZX-FIRKSDELL-Z X-AFIRKSDELL-Z X-LAFIRKSDELL-Z X-SLAFIRKSDELL-ZX-QSLAFIRKSDELL-Z X-NQSLAFIRKSDELL-Z X-INQSLAFIRKSDELL-ZX-KINQSLAFIRKSDELL-Z X-EKINQSLAFIRKSDELL-Z X-NEKINQSLAFIRKSDELL-ZX-VNEKINQSLAFIRKSDELL-Z X-QVNEKINQSLAFIRKSDELL-ZX-SQVNEKINQSLAFIRKSDELL-Z X-ISQVNEKINQSLAFIRKSDELL-ZX-SISQVNEKINQSLAFIRKSDELL-Z X-ASISQVNEKINQSLAFIRKSDELL-ZX-DASISQVNEKINQSLAFIRKSDELL-Z X-FDASISQVNEKINQSLAFIRKSDELL-ZX-EFDASISQVNEKINQSLAFIRKSDELL-Z X-DEFDASISQVNEKINQSLAFIRKSDELL-ZX-SDEFDASISQVNEKINQSLAFIRKSDELL-Z X-PSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-FPSDEFDASISQVNEKINQSLAFIRKSDELL-Z X-VFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-LVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-PLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-DPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-ZX-YDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELL-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XIX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG CARBOXYTRUNCATIONS X-ITL-Z X-ITLN-Z X-ITLNN-Z X-ITLNNS-Z X-ITLNNSV-ZX-ITLNNSVA-Z X-ITLNNSVAL-Z X-ITLNNSVALD-Z X-ITLNNSVALDP-ZX-ITLNNSVALDPI-Z X-ITLNNSVALDPID-Z X-ITLNNSVALDPIDI-ZX-ITLNNSVALDPIDIS-Z X-ITLNNSVALDPIDISI-Z X-ITLNNSVALDPIDISIE-ZX-ITLNNSVALDPIDISIEL-Z X-ITLNNSVALDPIDISIELN-Z X-ITLNNSVALDPIDISIELNK-ZX-ITLNNSVALDPIDISIELNKA-Z X-ITLNNSVALDPIDISIELNKAK-ZX-ITLNNSVALDPIDISIELNKAKS-Z X-ITLNNSVALDPIDISIELNKAKSD-ZX-ITLNNSVALDPIDISIELNKAKSDL-Z X-ITLNNSVALDPIDISIELNKAKSDLE-ZX-ITLNNSVALDPIDISIELNKAKSDLEE-Z X-ITLNNSVALDPIDISIELNKAKSDLEES-ZX-ITLNNSVALDPIDISIELNKAKSDLEESK-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKE-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEW-Z X-ITLNNSVALDPIDISIELNKAKSDLEESKEWI-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIR-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRR-ZX-ITLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z The one letter amino acid codeis used.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XX HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP178 ANALOG AMINOTRUNCATIONS X-RRS-Z X-IRRS-Z X-WIRRS-Z X-EWIRRS-Z X-KEWIRRS-ZX-SKEWIRRS-Z X-ESKEWIRRS-Z X-EESKEWIRRS-Z X-LEESKEWIRRS-ZX-DLEESKEWIRRS-Z X-SDLEESKEWIRRS-Z X-KSDLEESKEWIRRS-ZX-AKSDLEESKEWIRRS-Z X-KAKSDLEESKEWIRRS-Z X-NKAKSDLEESKEWIRRS-ZX-LNKAKSDLEESKEWIRRS-Z X-ELNKAKSDLEESKEWIRRS-Z X-IELNKAKSDLEESKEWIRRS-ZX-SIELNKAKSDLEESKEWIRRS-Z X-ISIELNKAKSDLEESKEWIRRS-ZX-DISIELNKAKSDLEESKEWIRRS-Z X-IDISIELNKAKSDLEESKEWIRRS-ZX-PIDISIELNKAKSDLEESKEWIRRS-Z X-DPIDISIELNKAKSDLEESKEWIRRS-ZX-LDPIDISIELNKAKSDLEESKEWIRRS-Z X-ALDPIDISIELNKAKSDLEESKEWIRRS-ZX-VALDPIDISIELNKAKSDLEESKEWIRRS-Z X-SVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-NSVALDPIDISIELNKAKSDLEESKEWIRRS-Z X-NNSVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-LNNSVALDPIDISIELNKAKSDLEESKEWIRRS-ZX-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRS-Z The one letter amino acid code isused.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXI HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG CARBOXYTRUNCATIONS X-ALG-Z X-ALGV-Z X-ALGVA-Z X-ALGVAT-Z X-ALGVATS-ZX-ALGVATSA-Z X-ALGVATSAQ-Z X-ALGVATSAQI-Z X-ALGVATSAQIT-ZX-ALGVATSAQITA-Z X-ALGVATSAQITAA-Z X-ALGVATSAQITAAV-ZX-ALGVATSAQITAAVA-Z X-ALGVATSAQITAAVAL-Z X-ALGVATSAQITAAVALV-ZX-ALGVATSAQITAAVALVE-Z X-ALGVATSAQITAAVALVEA-Z X-ALGVATSAQITAAVALVEAK-ZX-ALGVATSAQITAAVALVEAKQ-Z X-ALGVATSAQITAAVALVEAKQA-ZX-ALGVATSAQITAAVALVEAKQAR-Z X-ALGVATSAQITAAVALVEAKQARS-ZX-ALGVATSAQITAAVALVEAKQARSD-Z X-ALGVATSAQITAAVALVEAKQARSDI-ZX-ALGVATSAQITAAVALVEAKQARSDIE-Z X-ALGVATSAQITAAVALVEAKQARSDIEK-ZX-ALGVATSAQITAAVALVEAKQARSDIEKL-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLK-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKE-Z X-ALGVATSAQITAAVALVEAKQARSDIEKLKEA-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKEAI-ZX-ALGVATSAQITAAVALVEAKQARSDIEKLKEAIR-Z The one letter amino acid code isused.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXII HUMAN PARAINFLUENZA VIRUS 3 F1 REGION DP107 ANALOG AMINOTRUNCATIONS X-IRD-Z X-AIRD-Z X-EAIRD-Z X-KEAIRD-Z X-LKEAIRD-ZX-KLKEAIRD-Z X-EKLKEAIRD-Z X-IEKLKEAIRD-Z X-KIEKLKEAIRD-ZX-SKIEKLKEAIRD-Z X-DSKIEKLKEAIRD-Z X-ARSDKIEKLKEAIRD-ZX-QARSDIEKLKEAIRD-Z X-KQARSDIEKLKEAIRD-Z X-AKQARSDIEKLKEAIRD-ZX-EAKQARSDIEKLKEAIRD-Z X-VEAKQARSDIEKLKEAIRD-Z X-LVEAKQARSDIEKLKEAIRD-ZX-ALVEAKQARSDIEKLKEAIRD-Z X-VALVEAKQARSDIEKLKEAIRD-ZX-AVALVEAKQARSDIEKLKEAIRD-Z X-AAVALVEAKQARSDIEKLKEAIRD-ZX-TAAVALVEAKQARSDIEKLKEAIRD-Z X-ITAAVALVEAKQARSDIEKLKEAIRD-ZX-QITAAVALVEAKQARSDIEKLKEAIRD-Z X-AQITAAVALVEAKQARSDIEKLKEAIRD-ZX-SAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-TSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-ATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z X-VATSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-GVATSAQITAAVALVEAKQARSDIEKLKEAIRD-ZX-LGVATSAQITAAVALVEAKQARSDIEKLKEAIRD-Z The one letter amino acid code isused.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

TABLE XXIII REPRESENTATIVE DP107/DP178 ANALOG ANTIVIRAL PEPTIDESAnti-Respiratory syncytial virus peptidesX-TSVITIELSNIKENKCNGTDAKVKLIKQELDKYKN-ZX-SVITIELSNIKENKCNGTDAKVKLIKQELDKYKNA-ZX-VITIELSNIKENKCNGTDAKVKLIKQELDKYKNAV-ZX-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-ZX-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-ZX-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-ZX-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-ZX-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-ZX-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-ZX-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-ZX-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-ZX-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-ZX-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-ZX-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-ZX-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-ZX-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-ZX-VAVSKVLHLEGEVNKIALLSTNKAVVSLSNGVS-ZX-AVSKVLHLEGEVNKIALLSTNKAVVSLSNGVSV-ZX-VSKVLHLEGEVNKIALLSTNKAVVSLSNGVSVL-ZX-SKVLHLEGEVNKIALLSTNKAVVSLSNGVSVLT-ZX-KVLHLEGEVNKIALLSTNKAVVSLSNGVSVLTS-ZX-LEGEVNKIALLSTNKAVVSLSNGVSVLTSKVLD-ZX-GEVNKIALLSTNKAVVSLSNGVSVLTSKVLDLK-ZX-EVNKIALLSTNKAVVSLSNGVSVLTSKVLDLKN-ZX-VNKIALLSTNKAVVSLSNGVSVLTSKVLDLKNY-ZX-NKIALLSTNKAVVSLSNGVSVLTSKVLDLKNYI-ZX-KIALLSTNKAVVSLSNGVSVLTSKVLDLKNYID-ZX-IALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDK-ZX-ALLSTNKAVVSLSNGVSVLTSKVLDLKNYIDKQ-Z Anti-human parainfluenza virus 3peptides X-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRSN-ZX-LNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQ-ZX-NNSVALDPIDISIELNKAKSDLEESKEWIRRSNQK-ZX-NSVALDPIDISIELNKAKSDLEESKEWIRRSNQKL-ZX-SVALDPIDISIELNKAKSDLEESKEWIRRSNQKLD-ZX-VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDS-ZX-ALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI-ZX-LDPIDISIELNKAKSDLEESKEWIRRSNQKLDSIG-ZX-DPIDISIELNKAKSDLEESKEWIRRSNQKLDSIGN-ZX-PIDISIELNKAKSDLEESKEWIRRSNQKLDSIGNW-ZX-IDISIELNKAKSDLEESKEWIRRSNQKLDSIGNWH-ZX-DISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQ-ZX-ISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQS-ZX-SIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSS-ZX-IELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSST-ZX-ELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSSTT-ZX-TAAVALVEAKQARSDIEKLKEAIRDTNKAVQSVQS-ZX-AVALVEAKQARSDIEKLKEAIRDTNKAVQSVQSSI-ZX-LVEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNL-ZX-VEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLI-ZX-EAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIV-ZX-AKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVA-ZX-KQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAI-ZX-QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIK-ZX-ARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKS-ZX-RSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSV-ZX-SDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQ-ZX-KLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVN-ZX-LKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNK-ZX-AIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIV-Z Anti-simian immunodeficiencyvirus peptides X-WQEWERKVDFLEENITALLEEAQIQQEKNMYELQK-ZX-QEWERKVDFLEENITALLEEAQIQQEKNMYELQKL-ZX-EWERKVDFLEENITALLEEAQIQQEKNMYELQKLN-ZX-WERKVDFLEENITALLEEAQIQQEKNMYELQKLNS-ZX-ERKVDFLEENITALLEEAQIQQEKNMYELQKLNSW-ZX-RKVDFLEENITALLEEAQIQQEKNMYELQKLNSWD-ZX-KVDFLEENITALLEEAQIQQEKNMYELQKLNSWDV-ZX-VDFLEENITALLEEAQIQQEKNMYELQKLNSWDVF-ZX-DFLEENITALLEEAQIQQEKNMYELQKLNSWDVFG-ZX-FLEENITALLEEAQIQQEKNMYELQKLNSWDVFGN-Z Anti-measles virus peptidesX-LHRIDLGPPISLERLDVGTNLGNAIAKLEAKELL-ZX-HRIDLGPPISLERLDVGTNLGNAIAKLEAKELLE-ZX-RIDLGPPISLERLDVGTNLGNAIAKLEAKELLES-ZX-IDLGPPISLERLDVGTNLGNAIAKLEAKELLESS-ZX-DLGPPISLERLDVGTNLGNAIAKLEAKELLESSD-ZX-LGPPISLERLDVGTNLGNAIAKLEAKELLESSDQ-ZX-GPPISLERLDVGTNLGNAIAKLEAKELLESSDQI-ZX-PPISLERLDVGTNLGNAIAKLEAKELLESSDQIL-ZX-PISLERLDVGTNLGNAIAKLEAKELLESSDQILR-ZX-SLERLDVGTNLGNAIAKLEAKELLESSDQILRSM-ZX-LERLDVGTNLGNAIAKLEAKELLESSDQILRSMK-Z The one letter amino acid code isused.Additionally,“X” may represent an amino group, a hydrophobic group, including but notlimited to carbobenzoxyl, dansyl, or T-butyloxycarbonyl; an acetylgroup; a 9-fluorenylmethoxy-carbonyl (FMOC) group; a macromolecularcarrier group including but not limited to lipid-fatty acid conjugates,polyethylene glycol, or carbohydrates.“Z” may represent a carboxyl group; an amido group; a T-butyloxycarbonylgroup; a macromolecular carrier group including but not limited tolipid-fatty acid conjugates, polyethylene glycol, or carbohydrates.

5.4. Synthesis of Peptides

The peptides of the invention may be synthesized or prepared bytechniques well known in the art. See, for example, Creighton, 1983,Proteins: Structures and Molecular Principles, W. H. Freeman and Co.,NY, which is incorporated herein by reference in its entirety. Shortpeptides, for example, can be synthesized on a solid support or insolution. Longer peptides may be made using recombinant DNA techniques.Here, the nucleotide sequences encoding the peptides of the inventionmay be synthesized, and/or cloned, and expressed according to techniqueswell known to those of ordinary skill in the art. See, for example,Sambrook, et al., 1989, Molecular Cloning, A Laboratory Manual, Vols.1-3, Cold Spring Harbor Press, NY.

The peptides of the invention may alternatively be synthesized such thatone or more of the bonds which link the amino acid residues of thepeptides are non-peptide bonds. These alternative non-peptide bonds maybe formed by utilizing reactions well known to those in the art, and mayinclude, but are not limited to imino, ester, hydrazide, semicarbazide,and azo bonds, to name but a few. In yet another embodiment of theinvention, peptides comprising the sequences described above may besynthesized with additional chemical groups present at their aminoand/or carboxy termini, such that, for example, the stability,bioavailability, and/or inhibitory activity of the peptides is enhanced.For example, hydrophobic groups such as carbobenzoxyl, dansyl, ort-butyloxycarbonyl groups, may be added to the peptides' amino termini.Likewise, an acetyl group or a 9-fluorenylmethoxy-carbonyl group may beplaced at the peptides' amino termini. (See “X” in Tables I to IV,above.) Additionally, the hydrophobic group, t-butyloxycarbonyl, or anamido group may be added to the peptides' carboxy termini. (See “Z” inTables I to IV, above.)

Further, the peptides of the invention may be synthesized such thattheir steric configuration is altered. For example, the D-isomer of oneor more of the amino acid residues of the peptide may be used, ratherthan the usual L-isomer.

Still further, at least one of the amino acid residues of the peptidesof the invention may be substituted by one of the well knownnon-naturally occurring amino acid residues. Alterations such as thesemay serve to increase the stability, bioavailability and/or inhibitoryaction of the peptides of the invention.

Any of the peptides described above may, additionally, have amacromolecular carrier group covalently attached to their amino and/orcarboxy termini. Such macromolecular carrier groups may include, forexample, lipid-fatty acid conjugates, polyethylene glycol, carbohydratesor additional peptides. “X”, in Tables I to IV, above, may thereforeadditionally represent any of the above macromolecular carrier groupscovalently attached to the amino terminus of a peptide, with anadditional peptide group being preferred. Likewise, “Z”, in Tables I toIV, may additionally represent any of the macromolecular carrier groupsdescribed above.

5.5. Assays for Anti-membrane Fusion Activity

Described herein, are methods for ability of a compound, such as thepeptides of the invention, to inhibit membrane fusion events.Specifically, assays for cell fusion events are described in Section5.5.1, below, and assays for antiviral activity are described in Section5.5.2, below.

5.5.1 Assays for Cell Fusion Events

Assays for cell fusion events are well known to those of skill in theart, and may be used in conjunction, for example, with the peptides ofthe invention to test the peptides' antifusogenic capabilities.

Cell fusion assays are generally performed in vitro. Such an assay maycomprise culturing cells which, in the absence of any treatment wouldundergo an observable level of syncytial formation. For example,uninfected cells may be incubated in the presence of cells chronicallyinfected with a virus that induces cell fusion. Such viruses mayinclude, but are not limited to, HIV, SIV, or respiratory syncytialvirus.

For the assay, cells are incubated in the presence of a peptide to beassayed. For each peptide, a range of peptide concentrations may betested. This range should include a control culture wherein no peptidehas been added.

Standard conditions for culturing cells, well known to those of ordinaryskill in the art, are used. After incubation for an appropriate period(24 hours at 37° C., for example) the culture is examinedmicroscopically for the presence of multinucleated giant cells, whichare indicative of cell fusion and syncytial formation. Well knownstains, such as crystal violet stain, may be used to facilitate thevisualization of syncytial formation.

5.5.2 Assays for Antiviral Activity

The antiviral activity exhibited by the peptides of the invention may bemeasured, for example, by easily performed in vitro assays, such asthose described below, which can test the peptides' ability to inhibitsyncytia formation, or their ability to inhibit infection by cell-freevirus. Using these assays, such parameters as the relative antiviralactivity of the peptides, exhibit against a given strain of virus and/orthe strain specific inhibitory activity of the peptide can bedetermined.

A cell fusion assay may be utilized to test the peptides' ability toinhibit viral-induced, such as HIV-induced, syncytia formation in vitro.Such an assay may comprise culturing uninfected cells in the presence ofcells chronically infected with a syncytial-inducing virus and a peptideto be assayed. For each peptide, a range of peptide concentrations maybe tested. This range should include a control culture wherein nopeptide has been added. Standard conditions for culturing, well known tothose of ordinary skill in the art, are used. After incubation for anappropriate period (24 hours at 37° C., for example) the culture isexamined microscopically for the presence of multinucleated giant cells,which are indicative of cell fusion and, syncytia formation. Well knownstains, such as crystal violet stain, may be used to facilitatesyncytial visualization. Taking HIV as an example, such an assay wouldcomprise CD-4⁺ cells (such as Molt or CEM cells, for example) culturedin the presence of chronically HIV-infected cells and a peptide to beassayed.

Other well known characteristics of viral infection may also be assayedto test a peptide's antiviral capabilities. Once again taking HIV as anexample, a reverse transcriptase (RT) assay may be utilized to test thepeptides' ability to inhibit infection of CD-4⁺ cells by cell-free HIV.Such an assay may comprise culturing an appropriate concentration (i.e.,TCID₅₀) of virus and CD-4⁺ cells in the presence of the peptide to betested. Culture conditions well known to those in the art are used. Asabove, a range of peptide concentrations may be used, in addition to acontrol culture wherein no peptide has been added. After incubation foran appropriate period (e.g., 7 days) of culturing, a cell-freesupernatant is prepared, using standard procedures, and tested for thepresent of RT activity as a measure of successful infection. The RTactivity may be tested using standard techniques such as those describedby, for example, Goff et al. (Goff, S. et al., 1981, J. Virol.38:239-248) and/or Willey et al. (Willey, R. et al., 1988, J. Virol.62:139-147). These references are incorporated herein by reference intheir entirety.

Standard methods which are well-known to those of skill in the art maybe utilized for assaying non-retroviral activity. See, for example,Pringle et al. (Pringle, C. R. et al., 1985, J. Medical Virology17:377-386) for a discussion of respiratory syncytial virus andparainfluenza virus activity assay techniques. Further, see, forexample, “Zinsser Microbiology”, 1988, Joklik, W. K. et al., eds.,Appleton & Lange, Norwalk, Conn., 19th ed., for a general review of suchtechniques. These references are incorporated by reference herein intheir entirety. In addition, the Examples presented below, in Sections17, 18, 26 and 27 each provide additional assays for the testing of acompound's antiviral capability.

In vivo assays may also be utilized to test, for example, the antiviralactivity of the peptides of the invention. To test for anti-HIVactivity, for example, the in vivo model described in Barnett et al.(Barnett, S. W. et al., 1994, Science 266:642-646) may be used.

Additionally, anti-RSV activity can be assayed in vivo via well knownmouse models. For example, RSV can be administered intranasally to miceof various inbred strains. Virus replicates in lungs of all strains, butthe highest titers are obtained in P/N, C57L/N and DBA/2N mice.Infection of BALB/c mice produces an asymptomatic bronchiolitischaracterized by lymphocytic infiltrates and pulmonary virus titers of10⁴ to 10⁵ pfu/g of lung tissue (Taylor, G. et al., 1984, Infect. Immun.43:649-655).

Cotton rat models of RSV are also well known. Virus replicates to hightiter in the nose and lungs of the cotton rat but produces few if anysigns of inflammation.

5.6. Uses of the Peptides of the Invention

The peptides of the invention may be utilized as antifusogenic orantiviral compounds, or as compounds which modulate intracellularprocesses involving coiled coil peptide structures. Further, suchpeptides may be used to identify agents which exhibit antifusogenic,antiviral or intracellular modulatory activity. Still further, thepeptides of the invention may be utilized as organism or viraltype/subtype-specific diagnostic tools.

The antifusogenic capability of the peptides of the invention mayadditionally be utilized to inhibit or treat/ameliorate symptoms causedby processes involving membrane fusion events. Such events may include,for example, virus transmission via cell-cell fusion, abnormalneurotransmitter exchange via cell-fusion, and sperm-egg fusion.Further, the peptides of the invention may be used to inhibit freeviral, such as retroviral, particularly HIV, transmission to uninfectedcells wherein such viral infection involves membrane fusion events orinvolves fusion of a viral structure with a cell membrane. Among theintracellular disorders involving coiled coil peptides structures whichmay be ameliorated by the peptides of the invention are disordersinvolving, for example, bacterial toxins.

With respect to antiviral activity, the viruses whose transmission maybe inhibited by the peptides of the invention include, but are notlimited to all strains of the viruses listed above, in Tables V throughVII, and IX through XIV.

These viruses include, for example, human retroviruses, particularlyHIV-1 and HIV-2 and the human T-lymphocyte viruses (HTLV-I and II). Thenon-human retroviruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to bovineleukosis virus, feline sarcoma and leukemia viruses, simianimmunodeficiency, sarcoma and leukemia viruses, and sheep progresspneumonia viruses.

Non retroviral viruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to humanrespiratory syncytial virus, canine distemper virus, newcastle diseasevirus, human parainfluenza virus, influenza viruses, measles viruses,Epstein-Barr viruses, hepatitis B viruses, and simian Mason-Pfizerviruses.

Non enveloped viruses whose transmission may be inhibited by thepeptides of the invention include, but are not limited to picornavirusessuch as polio viruses, hepatitis A virus, enterovirus, echoviruses andcoxsackie viruses, papovaviruses such as papilloma virus, parvoviruses,adenoviruses and reoviruses.

As discussed more fully, below, in Section 5.5.1 and in the Examplepresented, below, in Section 8, DP107, DP178, DP107 analog and DP178analog peptides form non-covalent protein-protein interactions which arerequired for normal activity of the virus. Thus, the peptides of theinvention may also be utilized as components in assays for theidentification of compounds that interfere with such protein-proteininteractions and may, therefore, act as antiviral agents. These assaysare discussed, below, in Section 5.5.1.

As demonstrated in the Example presented below in Section 6, theantiviral activity of the peptides of the invention may show apronounced type and subtype specificity, i.e., specific peptides may beeffective in inhibiting the activity of only specific viruses. Thisfeature of the invention presents many advantages. One such advantage,for example, lies in the field of diagnostics, wherein one can use theantiviral specificity of the peptide of the invention to ascertain theidentity of a viral isolate. With respect to HIV, one may easilydetermine whether a viral isolate consists of an HIV-1 or HIV-2 strain.For example, uninfected CD-4⁺ cells may be co-infected with an isolatewhich has been identified as containing HIV the DP178 (SEQ ID:1)peptide, after which the retroviral activity of cell supernatants may beassayed, using, for example, the techniques described above in Section5.2. Those isolates whose retroviral activity is completely or nearlycompletely inhibited contain HIV-1. Those isolates whose viral activityis unchanged or only reduced by a small amount, may be considered to notcontain HIV-1. Such an isolate may then be treated with one or more ofthe other DP178 peptides of the invention, and subsequently be testedfor its viral activity in order to determine the identify of the viralisolate. The DP107 and DP178 analogs of the invention may also beutilized in a diagnostic capacity specific to the type and subtype ofvirus or organism in which the specific peptide sequence is found. Adiagnostic procedure as described, above, for DP178, may be used inconjunction with the DP107/DP178 analog of interest.

5.5.1. Screening Assays

As demonstrated in the Example presented in Section 8, below, DP107 andDP178 portions of the TM protein gp41 form non-covalent protein-proteininteractions. As is also demonstrated, the maintenance of suchinteractions is necessary for normal viral infectivity. Thus, compoundswhich bind DP107, bind DP178, and/or act to disrupt normal DP107/DP178protein-protein interactions may act as antifusogenic, antiviral orcellular modulatory agents. Described below are assays for theidentification of such compounds. Note that, while, for ease and clarityof discussion, DP107 and DP178 peptides will be used as components ofthe assays described, but it is to be understood that any of the DP107analog or DP178 analog peptides described, above, in Sections 5.1through 5.3 may also be utilized as part of these screens for compounds.

Compounds which may be tested for an ability to bind DP107, DP178,and/or disrupt DP107/DP178 interactions, and which therefore,potentially represent antifusogenic, antiviral or intracellularmodulatory compounds, include, but are not limited to, peptides made ofD- and/or L-configuration amino acids (in, for example, the form ofrandom peptide libraries; see Lam, K. S. et al., 1991, Nature354:82-84), phosphopeptides (in, for example, the form of random orpartially degenerate, directed phosphopeptide libraries; see, forexample, Songyang, Z. et al., 1993, Cell 72:767-778), antibodies, andsmall organic or inorganic molecules. Synthetic compounds, naturalproducts, and other sources of potentially effective materials may bescreened in a variety of ways, as described in this Section.

The compounds, antibodies, or other molecules identified may be tested,for example, for an ability to inhibit cell fusion or viral activity,utilizing, for example, assays such as those described, above, inSection 5.5.

Among the peptides which may be tested are soluble peptides comprisingDP107 and/or DP178 domains, and peptides comprising DP107 and/or DP178domains having one or more mutations within one or both of the domains,such as the M41-P peptide described, below, in the Example presented inSection 8, which contains a isoleucine to proline mutation within theDP178 sequence.

In one embodiment of such screening methods is a method for identifyinga compound to be tested for antiviral ability comprising:

-   -   (a) exposing at least one compound to a peptide comprising a        DP107 peptide for a time sufficient to allow binding of the        compound to the DP107 peptide;    -   (b) removing non-bound compounds; and    -   (c) determining the presence of the compound bound to the DP107        peptide, thereby identifying an agent to be tested for antiviral        ability.

In a second embodiment of such screening methods is a method foridentifying a compound to be tested for antiviral ability comprising:

-   -   (a) exposing at least one compound to a peptide comprising a        DP178 peptide for a time sufficient to allow binding of the        compound to the DP178 peptide;    -   (b) removing non-bound compounds; and    -   (c) determining the presence of the compound bound to the DP178        peptide, thereby identifying an agent to be tested for antiviral        ability.

One method utilizing these types of approaches that may be pursued inthe isolation of such DP107-binding or DP178-binding compounds is anassay which would include the attachment of either the DP107 or theDP178 peptide to a solid matrix, such as, for example, agarose orplastic beads, microtiter plate wells, petri dishes, or membranescomposed of, for example, nylon or nitrocellulose. In such an assaysystem, either the DP107 or DP178 protein may be anchored onto a solidsurface, and the compound, or test substance, which is not anchored, islabeled, either directly or indirectly. In practice, microtiter platesare conveniently utilized. The anchored component may be immobilized bynon-covalent or covalent attachments. Non-covalent attachment may beaccomplished simply by coating the solid surface with a solution of theprotein and drying.

Alternatively, an immobilized antibody, preferably a monoclonalantibody, specific for the protein may be used to anchor the protein tothe solid surface. The surfaces may be prepared in advance and stored.

In order to conduct the assay, the labeled compound is added to thecoated surface containing the anchored DP107 or DP178 peptide. After thereaction is complete, unreacted components are removed (e.g., bywashing) under conditions such that any complexes formed will remainimmobilized on the solid surface. The detection of complexes anchored onthe solid surface can be accomplished in a number of ways. Where thecompound is pre-labeled, the detection of label immobilized on thesurface indicates that complexes were formed. Where the labeledcomponent is not pre-labeled, an indirect label can be used to detectcomplexes anchored on the surface; e.g., using a labeled antibodyspecific for the compound (the antibody, in turn, may be directlylabeled or indirectly labeled with a labeled anti-Ig antibody).

Alternatively, such an assay can be conducted in a liquid phase, thereaction products separated from unreacted components, and complexesdetected; e.g., using an immobilized antibody specific for DP107 orDP178, whichever is appropriate for the given assay, or ab antibodyspecific for the compound, i.e., the test substance, in order to anchorany complexes formed in solution, and a labeled antibody specific forthe other member of the complex to detect anchored complexes.

By utilizing procedures such as this, large numbers of types ofmolecules may be simultaneously screened for DP107 or DP178-bindingcapability, and thus potential antiviral activity.

Further, compounds may be screened for an ability to inhibit theformation of or, alternatively, disrupt DP107/DP178 complexes. Suchcompounds may then be tested for antifusogenic, antiviral orintercellular modulatory capability. For ease of description, DP107 andDP178 will be referred to as “binding partners.” Compounds that disruptsuch interactions may exhibit antiviral activity. Such compounds mayinclude, but are not limited to molecules such as antibodies, peptides,and the like described above.

The basic principle of the assay systems used to identify compounds thatinterfere with the interaction between the DP107 and DP178 peptidesinvolves preparing a reaction mixture containing peptides underconditions and for a time sufficient to allow the two peptides tointeract and bind, thus forming a complex. In order to test a compoundfor disruptive activity, the reaction is conducted in the presence andabsence of the test compound, i.e., the test compound may be initiallyincluded in the reaction mixture, or added at a time subsequent to theaddition of one of the binding partners; controls are incubated-withoutthe test compound or with a placebo. The formation of any complexesbetween the binding partners is then detected. The formation of acomplex in the control reaction, but not in the reaction mixturecontaining the test compound indicates that the compound interferes withthe interaction of the DP107 and DP178 peptides.

The assay for compounds that interfere with the interaction of thebinding partners can be conducted in a heterogeneous or homogeneousformat. Heterogeneous assays involve anchoring one of the bindingpartners onto a solid phase and detecting complexes anchored on thesolid phase at the end of the reaction. In homogeneous assays, theentire reaction is carried out in a liquid phase. In either approach,the order of addition of reactants can be varied to obtain differentinformation about the compounds being tested. For example, testcompounds that interfere with the interaction between the bindingpartners, e.g., by competition, can be identified by conducting thereaction in the presence of the test substance; i.e., by adding the testsubstance to the reaction mixture prior to or simultaneously with thebinding partners. On the other hand, test compounds that disruptpreformed complexes, e.g. compounds with higher binding constants thatdisplace one of the binding partners from the complex, can be tested byadding the test compound to the reaction mixture after complexes havebeen formed. The various formats are described briefly below.

In a heterogeneous assay system, one binding partner, e.g., either theDP107 or DP178 peptide, is anchored onto a solid surface, and itsbinding partner, which is not anchored, is labeled, either directly orindirectly. In practice, microtiter plates are conveniently utilized.The anchored species may be immobilized by non-covalent or covalentattachments. Non-covalent attachment may be accomplished simply bycoating the solid surface with a solution of the protein and drying.Alternatively, an immobilized antibody specific for the protein may beused to anchor the protein to the solid surface. The surfaces may beprepared in advance and stored.

In order to conduct the assay, the binding partner of the immobilizedspecies is added to the coated surface with or without the testcompound. After the reaction is complete, unreacted components areremoved (e.g., by washing) and any complexes formed will remainimmobilized on the solid surface. The detection of complexes anchored onthe solid surface can be accomplished in a number of ways. Where thebinding partner was pre-labeled, the detection of label immobilized onthe surface indicates that complexes were formed. Where the bindingpartner is not pre-labeled, an indirect label can be used to detectcomplexes anchored on the surface; e.g., using a labeled antibodyspecific for the binding partner (the antibody, in turn, may be directlylabeled or indirectly labeled with a labeled anti-Ig antibody).Depending upon the order of addition of reaction components, testcompounds which inhibit complex formation or which disrupt preformedcomplexes can be detected.

Alternatively, the reaction can be conducted in a liquid phase in thepresence or absence of the test compound, the reaction productsseparated from unreacted components, and complexes detected; e.g., usingan immobilized antibody specific for one binding partner to anchor anycomplexes formed in solution, and a labeled antibody specific for theother binding partner to detect anchored complexes. Again, dependingupon the order of addition of reactants to the liquid phase, testcompounds which inhibit complex or which disrupt preformed complexes canbe identified.

In an alternate embodiment of the invention, a homogeneous assay can beused. In this approach, a preformed complex of the DP107 and DP178peptides is prepared in which one of the binding partners is labeled,but the signal generated by the label is quenched due to complexformation (see, e.g., U.S. Pat. No. 4,109,496 by Rubenstein whichutilizes this approach for immunoassays). The addition of a testsubstance that competes with and displaces one of the binding partnersfrom the preformed complex will result in the generation of a signalabove background. In this way, test substances which disruptDP-107/DP-178 protein-protein interaction can be identified.

In an alternative screening assay, test compounds may be assayed for thetheir ability to disrupt a DP178/DP107 interaction, as measuredimmunometrically using an antibody specifically reactive to aDP107/DP178 complex (i.e., an antibody that recognizes neither DP107 norDP178 individually). Such an assay acts as a competition assay, and isbased on techniques well known to those of skill in the art.

The above competition assay may be described, by way of example, and notby way of limitation, by using the DP178 and M41Δ178 peptides and byassaying test compounds for the disruption of the complexes formed bythese two peptides by immunometrically visualizing DP178/M41Δ178complexes via the human recombinant Fab, Fab-d, as described, below, inthe Example presented in Section 8. M41Δ178 is a maltose binding fusionprotein containing a gp41 region having its DP178 domain deleted, and isdescribed, below, in the Example presented in Section 8.

Utilizing such an assay, M41Δ178 may be immobilized onto solid supportssuch as microtiter wells. A series of dilutions of a test compound maythen be added to each M41Δ178-containing well in the presence of aconstant concentration of DP-178 peptide. After incubation, at, forexample, room temperature for one hour, unbound DP-178 and test compoundare removed from the wells and wells are then incubated with theDP178/M41Δ178-specific Fab-d antibody. After incubation and washing,unbound Fab-d is removed from the plates and bound Fab-d is quantitated.A no-inhibitor control should also be conducted. Test compounds showingan ability to disrupt DP178/M41Δ178 complex formation are identified bytheir concentration-dependent decrease in the level of Fab-d binding.

A variation of such an assay may be utilized to perform a rapid,high-throughput binding assay which is capable of directly measuringDP178 binding to M41Δ178 for the determination of binding constants ofthe ligand of inhibitory constants for competitors of DP178 binding.

Such an assay takes advantage of accepted radioligand and receptorbinding principles. (See, for example, Yamamura, H. I. et al., 1985,“Neurotransmitter Receptor Binding”, 2nd ed., Raven Press, NY.) Asabove, M41Δ178 is immobilized onto a solid support such as a microtiterwell. DP178 binding to M41Δ178 is then quantitated by measuring thefraction of DP178 that is bound as ¹²⁵I-DP178 and calculating the totalamount bound using a value for specific activity (dpm/μg peptide)determined for each labeled DP178 preparation. Specific binding toM41Δ178 is defined as the difference of the binding of the labeled DP178preparation in the microtiter wells (totals) and the binding inidentical wells containing, in addition, excess unlabeled DP178(nonspecifics).

5.5 Pharmaceutical Formations, Dosages and Modes of Administration

The peptides of the invention may be administered using techniques wellknown to those in the art. Preferably, agents are formulated andadministered systemically. Techniques for formulation and administrationmay be found in “Remington's Pharmaceutical Sciences”, 18th ed., 1990,Mack Publishing Co., Easton, Pa. Suitable routes may include oral,rectal, transmucosal, or intestinal administration; parenteral delivery,including intramuscular, subcutaneous, intramedullary injections, aswell as, intrathecal, direct intraventricular, intravenous,intraperitoneal, intranasal, or intraocular injections, just to name afew. For injection, the agents of the invention may be formulated inaqueous solutions, preferably in physiologically compatible buffers suchas Hanks' solution, Ringer's solution, or physiological saline buffer.For such transmucosal administration, penetrants appropriate to thebarrier to be permeated are used in the formulation. Such penetrants aregenerally known in the art.

In instances wherein intracellular administration of the peptides of theinvention or other inhibitory agents is preferred, techniques well knownto those of ordinary skill in the art may be utilized. For example, suchagents may be encapsulated into liposomes, then administered asdescribed above. Liposomes are spherical lipid bilayers with aqueousinteriors. All molecules present in an aqueous solution at the time ofliposome formation are incorporated into the aqueous interior. Theliposomal contents are both protected from the external microenvironmentand, because liposomes fuse with cell membranes, are effectivelydelivered into the cell cytoplasm. Additionally, due to theirhydrophobicity, when small molecules are to be administered, directintracellular administration may be achieved.

Nucleotide sequences encoding the peptides of the invention which are tobe intracellularly administered may be expressed in cells of interest,using techniques well known to those of skill in the art. For example,expression vectors derived from viruses such as retroviruses, vacciniaviruses, adeno-associated viruses, herpes viruses, or bovine papillomaviruses, may be used for delivery and expression of such nucleotidesequences into the targeted cell population. Methods for theconstruction of such vectors and expression constructs are well known.See, for example, Sambrook et al., 1989, Molecular Cloning, A LaboratoryManual, Cold Spring Harbor Press, Cold Spring Harbor N.Y., and Ausubelet al., 1989, Current Protocols in Molecular Biology, Greene PublishingAssociates and Wiley Interscience, NY.

With respect to HIV, peptides of the invention, particularly DP107 andDP178, may be used as therapeutics in the treatment of AIDS. Inaddition, the peptides may be used as prophylactic measures inpreviously uninfected individuals after acute exposure to an HIV virus.Examples of such prophylactic use of the peptides may include, but arenot limited to, prevention of virus transmission from mother to infantand other settings where the likelihood of HIV transmission exists, suchas, for example, accidents in health care settings wherein workers areexposed to HIV-containing blood products. The successful use of suchtreatments do not rely upon the generation of a host immune responsedirected against such peptides.

Effective dosages of the peptides of the invention to be administeredmay be determined through procedures well known to those in the artwhich address such parameters as biological half-life, bioavailability,and toxicity. Given the data presented below in Section 6, DP178, forexample, may prove efficacious in vivo at doses required to achievecirculating levels of about 1 to about 10 ng per ml of peptide.

A therapeutically effective dose refers to that amount of the compoundsufficient to result in amelioration of symptoms or a prolongation ofsurvival in a patient. Toxicity and therapeutic efficacy of suchcompounds can be determined by standard pharmaceutical procedures incell cultures or experimental animals, e.g., for determining the LD₅₀(the dose lethal to 50% of the population) and the ED50 (the dosetherapeutically effective in 50% of the population). The dose ratiobetween toxic and therapeutic effects is the therapeutic index and itcan be expressed as the ratio LD₅₀/ED₅₀. Compounds which exhibit largetherapeutic indices are preferred. The data obtained from these cellculture assays and animal studies can be used in formulating a range ofdosage for use in humans. The dosage of such compounds lies preferablywithin a range of circulating concentrations that include the ED50 withlittle or no toxicity. The dosage may vary within this range dependingupon the dosage form employed and the route of administration utilized.For any compound used in the method of the invention, thetherapeutically effective dose can be estimated initially from cellculture assays. A dose may be formulated in animal models to achieve acirculating plasma concentration range that includes the IC₅₀ (e.g., theconcentration of the test compound which achieves a half-maximalinhibition of the fusogenic event, such as a half-maximal inhibition ofviral infection relative to the amount of the event in the absence ofthe test compound) as determined in cell culture. Such information canbe used to more accurately determine useful doses in humans. Levels inplasma may be measured, for example, by high performance liquidchromatography (HPLC).

The peptides of the invention may, further, serve the role of aprophylactic vaccine, wherein the host raises antibodies against thepeptides of the invention, which then serve to neutralize HIV virusesby, for example, inhibiting further HIV infection.

Administration of the peptides of the invention as a prophylacticvaccine, therefore, would comprise administering to a host aconcentration of peptides effective in raising an immune response whichis sufficient to neutralize HIV, by, for example, inhibiting HIV abilityto infect cells. The exact concentration will depend upon the specificpeptide to be administered, but may be determined by using standardtechniques for assaying the development of an immune response which arewell known to those of ordinary skill in the art. The peptides to beused as vaccines are usually administered intramuscularly.

The peptides may be formulated with a suitable adjuvant in order toenhance the immunological response. Such adjuvants may include, but arenot limited to mineral gels such as aluminum hydroxide; surface activesubstances such as lysolecithin, pluronic polyols, polyanions; otherpeptides; oil emulsions; and potentially useful human adjuvants such asBCG and Corynebacterium parvum. Many methods may be used to introducethe vaccine formulations described here. These methods include but arenot limited to oral, intradermal, intramuscular, intraperitoneal,intravenous, subcutaneous, and intranasal routes.

Alternatively, an effective concentration of polyclonal or monoclonalantibodies raised against the peptides of the invention may beadministered to a host so that no uninfected cells become infected byHIV. The exact concentration of such antibodies will vary according toeach specific antibody preparation, but may be determined using standardtechniques well known to those of ordinary skill in the art.Administration of the antibodies may be accomplished using a variety oftechniques, including, but not limited to those described in thissection.

For all such treatments described above, the exact formulation, route ofadministration and dosage can be chosen by the individual physician inview of the patient's condition. (See e.g. Fingl et al., 1975, in “ThePharmacological Basis of Therapeutics”, Ch. 1 p1).

It should be noted that the attending physician would know how to andwhen to terminate, interrupt, or adjust administration due to toxicity,or to organ dysfunctions. Conversely, the attending physician would alsoknow to adjust treatment to higher levels if the clinical response werenot adequate (precluding toxicity). The magnitude of an administrateddose in the management of the oncogenic disorder of interest will varywith the severity of the condition to be treated and the route ofadministration. The dose and perhaps dose frequency, will also varyaccording to the age, body weight, and response of the individualpatient. A program comparable to that discussed above may be used inveterinary medicine.

Use of pharmaceutically acceptable carriers to formulate the compoundsherein disclosed for the practice of the invention into dosages suitablefor systemic administration is within the scope of the invention. Withproper choice of carrier and suitable manufacturing practice, thecompositions of the present invention, in particular, those formulatedas solutions, may be administered parenterally, such as by intravenousinjection. The compounds can be formulated readily usingpharmaceutically acceptable carriers well known in the art into dosagessuitable for oral administration. Such carriers enable the compounds ofthe invention to be formulated as tablets, pills, capsules, liquids,gels, syrups, slurries, suspensions and the like, for oral ingestion bya patient to be treated.

Pharmaceutical compositions suitable for use in the present inventioninclude compositions wherein the active ingredients are contained in aneffective amount to achieve its intended purpose. Determination of theeffective amounts is well within the capability of those skilled in theart, especially in light of the detailed disclosure provided herein.

In addition to the active ingredients, these pharmaceutical compositionsmay contain suitable pharmaceutically acceptable carriers comprisingexcipients and auxiliaries which facilitate processing of the activecompounds into preparations which can be used pharmaceutically. Thepreparations formulated for oral administration may be in the form oftablets, dragees, capsules, or solutions.

The pharmaceutical compositions of the present invention may bemanufactured in a manner that is itself known, e.g., by means ofconventional mixing, dissolving, granulating, dragee-making, levigating,emulsifying, encapsulating, entrapping or lyophilizing processes.

Pharmaceutical formulations for parenteral administration includeaqueous solutions of the active compounds in water-soluble form.Additionally, suspensions of the active compounds may be prepared asappropriate oily injection suspensions. Suitable lipophilic solvents orvehicles include fatty oils such as sesame oil, or synthetic fatty acidesters, such as ethyl oleate or triglycerides, or liposomes. Aqueousinjection suspensions may contain substances which increase theviscosity of the suspension, such as sodium carboxymethyl cellulose,sorbitol, or dextran. Optionally, the suspension may also containsuitable stabilizers or agents which increase the solubility of thecompounds to allow for the preparation of highly concentrated solutions.

Pharmaceutical preparations for oral use can be obtained by combiningthe active compounds with solid excipient, optionally grinding aresulting mixture, and processing the mixture of granules, after addingsuitable auxiliaries, if desired, to obtain tablets or dragee cores.Suitable excipients are, in particular, fillers such as sugars,including lactose, sucrose, mannitol, or sorbitol; cellulosepreparations such as, for example, maize starch, wheat starch, ricestarch, potato starch, gelatin, gum tragacanth, methyl cellulose,hydroxypropylmethyl-cellulose, sodium carboxymethylcellulose, and/orpolyvinylpyrrolidone (PVP). If desired, disintegrating agents may beadded, such as the cross-linked polyvinyl pyrrolidone, agar, or alginicacid or a salt thereof such as sodium alginate.

Dragee cores are provided with suitable coatings. For this purpose,concentrated sugar solutions may be used, which may optionally containgum arabic, talc, polyvinyl pyrrolidone, carbopol gel, polyethyleneglycol, and/or titanium dioxide, lacquer solutions, and suitable organicsolvents or solvent mixtures. Dyestuffs or pigments may be added to thetablets or dragee coatings for identification or to characterizedifferent combinations of active compound doses.

Pharmaceutical preparations which can be used orally include push-fitcapsules made of gelatin, as well as soft, sealed capsules made ofgelatin and a plasticizer, such as glycerol or sorbitol. The push-fitcapsules can contain the active ingredients in admixture with fillersuch as lactose, binders such as starches, and/or lubricants such astalc or magnesium stearate and, optionally, stabilizers. In softcapsules, the active compounds may be dissolved or suspended in suitableliquids, such as fatty oils, liquid paraffin, or liquid polyethyleneglycols. In addition, stabilizers may be added.

6. EXAMPLE DP178 (SEQ ID:1) is a Potent Inhibitor of HIV-1 Infection

In this example, DP178 (SEQ ID:1) is shown to be a potent inhibitor ofHIV-1 mediated CD-4⁺ cell-cell fusion and infection by cell free virus.In the fusion assay, this peptide completely blocks virus inducedsyncytia formation at concentrations of from 1-10 ng/ml. In theinfectivity assay the inhibitory concentration is somewhat higher,blocking infection at 90 ng/ml. It is further shown that DP178 (SEQID:1) shows that the antiviral activity of DP178 (SEQ ID:1) is highlyspecific for HIV-1. Additionally, a synthetic peptide, DP-185 (SEQID:3), representing a HIV-1-derived DP178 homolog is also found to blockHIV-1-mediated syncytia formation.

6.1. Materials and Methods 6.1.1. Peptide Synthesis

Peptides were synthesized using Fast Moc chemistry on an AppliedBiosystems Model 431A peptide synthesizer. Generally, unless otherwisenoted, the peptides contained amidated carboxy termini and acetylatedamino termini. Amidated peptides were prepared using Rink resin(Advanced Chemtech) while peptides containing free carboxy termini weresynthesized on Wang (p-alkoxy-benzyl-alcohol) resin (Bachem). Firstresidues were double coupled to the appropriate resin and subsequentresidues were single coupled. Each coupling step was followed by aceticanhydride capping. Peptides were cleaved from the resin by treatmentwith trifluoracetic acid (TFA) (10 ml), H₂O (0.5 ml), thioanisole (0.5ml), ethanedithiol (0.25 ml), and crystalline phenol (0.75 g).Purification was carried out by reverse phase HPLC.

Approximately 50 mg samples of crude peptide were chromatographed on aWaters Delta Pak C18 column (19 mm×30 cm, 15μ spherical) with a lineargradient;

H₂O/acetonitrile 0.1% TFA. Lyophilized peptides were stored desiccatedand peptide solutions were made in water at about 1 mg/ml. Electrospraymass spectrometry yielded the following results: DP178 (SEQID:1):4491.87 (calculated 4491.94); DP-180 (SEQ ID:2):4491.45(calculated 4491.94); DP-185 (SEQ ID:3):not done (calculated 4546.97).

6.1.2. Virus

The HIV-1_(LAI) virus was obtained from R. Gallo (Popovic, M. et al.,1984, Science 224:497-508) and propagated in CEM cells cultured in RPMI1640 containing 10% fetal calf serum. Supernatant from the infected CEMcells was passed through a 0.2μm filter and the infectious titerestimated in a microinfectivity assay using the AA5 cell line to supportvirus replication. For this purpose, 25 μl of serial diluted virus wasadded to 75 μl AA5 cells at a concentration of 2×10⁵/ml in a 96-wellmicrotitre plate. Each virus dilution was tested in triplicate. Cellswere cultured for eight days by addition of fresh medium every otherday. On day 8 post infection, supernatant samples were tested for virusreplication as evidenced by reverse transcriptase activity released tothe supernatant. The TCID₅₀ was calculated according to the Reed andMuench formula (Reed, L. J. et al., 1938, Am. J. Hyg. 27:493-497). Thetiter of the HIV-1_(LAI) and HIV-1_(MN) stocks used for these studies,as measured on the AA5 cell line, was approximately 1.4×10⁶ and 3.8×10⁴TCID₅₀/ml, respectively.

6.1.3. Cell Fusion Assay

Approximately 7×10⁴ Molt cells were incubated with 1×10⁴ CEM cellschronically infected with the HIV-1_(LAI) virus in 96-well plates(one-half area cluster plates; Costar, Cambridge, Mass.) in a finalvolume of 100 μl culture medium as previously described (Matthews, T. J.et al., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5428). Peptideinhibitors were added in a volume of 10 μl and the cell mixtures wereincubated for 24 hr. at 37° C. At that time, multinucleated giant cellswere estimated by microscopic examination at a 40× magnification whichallowed visualization of the entire well in a single field.

6.1.4. Cell Free Virus Infection Assay

Synthetic peptides were incubated at 37° C. with either 247 TCID₅₀ (forexperiment depicted in FIG. 2), or 62 TCID₅₀ (for experiment depicted inFIG. 3) units of HIV-1_(LAI) virus or 25 TCID₅₀ units of HIV-2_(NIHZ)and CEM CD4⁺ cells at peptide concentrations of 0, 0.04, 0.4, 4.0, and40 μg/ml for 7 days. The resulting reverse transcriptase (RT) activityin counts per minute was determined using the assay described, below, inSection 6.1.5. See, Reed, L. J. et al., 1938, Am. J. Hyg. 27: 493-497for an explanation of TCID₅₀ calculations.

6.1.5. Reverse Transcriptase Assay

The micro-reverse transcriptase (RT) assay was adapted from Goff et al.(Goff, S. et al., 1981, J. Virol. 38:239-248) and Willey et al. (Willey,R. et al., 1988, J. Virol. 62:139-147). Supernatants from virus/cellcultures are adjusted to 1% Triton-X100. A 10 μl sample of supernatantwas added to 50 μl of RT cocktail in a 96-well U-bottom microtitre plateand the samples incubated at 37° C. for 90 min. The RT cocktailcontained 75 mM KCl, 2 mM dithiothreitol, 5 mM MgCl₂, 5 μg/ml poly A(Pharmacia, cat. No. 27-4110-01), 0.25 units/ml oligo dT (Pharmacia,cat. No. 27-7858-01), 0.05% NP40, 50 mM Tris-HCl, pH 7.8, 0.5 μMnon-radioactive dTTP, and 10 μCi/ml ³²P-dTTP (Amersham, cat. No.PB.10167).

After the incubation period, 40 μl of reaction mixture was applied to aSchleicher and Schuell (S+S) NA45 membrane (or DE81 paper) saturated in2×SSC buffer (0.3M NaCl and 0.003M sodium citrate) held in a S+SMinifold over one sheet of GB003 (S+S) filter paper, with partial vacuumapplied. Each well of the minifold was washed four times with 200 μl2×SSC, under full vacuum. The membrane was removed from the minifold andwashed 2 more times in a pyrex dish with an excess of 2×SSC. Finally,the membrane was drained on absorbent paper, placed on Whatman #3 paper,covered with Saran wrap, and exposed to film overnight at −70° C.

6.2. Results 6.2.1. Peptide Inhibition of Infected Cell-induced SyncytiaFormation

The initial screen for antiviral activity assayed peptides' ability toblock syncytium formation induced by overnight co-cultivation ofuninfected Molt4 cells with chronically HIV-1 infected CEM cells. Theresults of several such experiments are presented herein. In the firstof these experiments, serial DP178 (SEQ ID:1) peptide concentrationsbetween 10 μg/ml and 12.5 ng/ml were tested for blockade of the cellfusion process. For these experiments, CEM cells chronically infectedwith either HIV-1_(LAI), HIV-1_(MN), HIV-1_(RF), or HIV-1_(SF2) viruswere cocultivated overnight with uninfected Molt 4 cells. The results(FIG. 4) show that DP178 (SEQ ID:1) afforded complete protection againsteach of the HIV-1 isolates down to the lowest concentration of DP178(SEQ ID:1) used. For HIV_(LAI) inhibition, the lowest concentrationtested was 12.5 ng/ml; for all other HIV-1 viruses, the lowestconcentration of DP178 (SEQ ID:1) used in this study was 100 ng/ml. Asecond peptide, DP-180 (SEQ ID:2), containing the same amino acidresidues as DP178 (SEQ ID:1) but arranged in a random order exhibited noevidence of anti-fusogenic activity even at the high concentration of 40μg/ml (FIG. 4). These observations indicate that the inhibitory effectof DP178 (SEQ ID:1) is primary sequence-specific and not related tonon-specific peptide/protein interactions. The actual endpoint (i.e.,the lowest effective inhibitory concentration) of DP178 inhibitoryaction is within the range of 1-10 ng/ml.

The next series of experiments involved the preparation and testing of aDP178 (SEQ ID:1) homolog for its ability to inhibit HIV-1-inducedsyncytia formation. As shown in FIG. 1, the sequence of DP-185 (SEQID:3) is slightly different from DP178 (SEQ ID:1) in that its primarysequence is taken from the HIV-1_(SF2) isolate and contains severalamino acid differences relative to DP178 (SEQ ID:1) near the N terminus.As shown in FIG. 4, DP-185 (SEQ ID:3), exhibits inhibitory activity evenat 312.5 ng/ml, the lowest concentration tested.

The next series of experiments involved a comparison of DP178 (SEQ ID:1)HIV-1 and HIV-2 inhibitory activity. As shown in FIG. 5, DP178 (SEQID:1) blocked HIV-1-mediated syncytia formation at peptideconcentrations below 1 ng/ml. DP178 (SEQ ID:1) failed, however, to blockHIV-2 mediated syncytia formation at concentrations as high as 10 μg/ml.This striking 4 log selectivity of DP178 (SEQ ID:1) as an inhibitor ofHIV-1-mediated cell fusion demonstrates an unexpected HIV-1 specificityin the action of DP178 (SEQ ID:1). DP178 (SEQ ID:1) inhibition ofHIV-1-mediated cell fusion, but the peptide's inability to inhibit HIV-2medicated cell fusion in the same cell type at the concentrations testedprovides further evidence for the high degree of selectivity associatedwith the antiviral action of DP178 (SEQ ID:1).

6.2.2. Peptide Inhibition of Infection by Cell-free Virus

DP178 (SEQ ID:1) was next tested for its ability to block CD-4⁺ CEM cellinfection by cell free HIV-1 virus. The results, shown in FIG. 2, arefrom an experiment in which DP178 (SEQ ID:1) was assayed for its abilityto block infection of CEM cells by an HIV-1_(LAI) isolate. Included inthe experiment were three control peptides, DP-116 (SEQ ID:9), DP-125(SEQ ID:8), and DP-118 (SEQ ID:10). DP-116 (SEQ ID:9) represents apeptide previously shown to be inactive using this assay, and DP-125(SEQ ID:8; Wild, C. et al., 1992, Proc. Natl. Acad, Sci. USA 89:10,537)and DP-118 (SEQ ID:10) are peptides which have previously been shown tobe active in this assay. Each concentration (0, 0.04, 0.4, 4, and 40μg/ml) of peptide was incubated with 247 TCID₅₀ units of HIV-_(LAI)virus and CEM cells. After 7 days of culture, cell-free supernatant wastested for the presence of RT activity as a measure of successfulinfection. The results, shown in FIG. 2, demonstrate that DP178 (SEQID:1) inhibited the de novo infection process mediated by the HIV-1viral isolate at concentrations as low as 90 ng/ml (IC₅₀=90 ng/ml). Incontrast, the two positive control peptides, DP-125 (SEQ: ID:8) andDP-118 (SEQ ID:10), had over 60-fold higher IC50 concentrations ofapproximately 5 μg/ml.

In a separate experiment, the HIV-1 and HIV-2 inhibitory action of DP178(SEQ ID:1) was tested with CEM cells and either HIV-1_(LAI) orHIV-2_(NIHZ). 62 TCID₅₀ HIV-1_(LAI) or 25 GCID₅₀ HIV-2_(NIHZ) were usedin these experiments, and were incubated for 7 days. As may be seen inFIG. 3, DP178 (SEQ ID:1) inhibited HIV-1 infection with an IC50 of about31 ng/ml. In contrast, DP178 (SEQ ID:1) exhibited a much higher IC50 forHIV-2_(NIHZ), thus making DP178 (SEQ ID:1) two logs more potent as aHIV-1 inhibitor than a HIV-2 inhibitor. This finding is consistent withthe results of the fusion inhibition assays described, above, in Section6.2.1, and further supports a significant level of selectivity (i.e.,for HIV-1 over HIV-2).

7. EXAMPLE The HIV-1 Inhibitor, DP178 (SEQ ID:1) is Non-cytotoxic

In this Example, the 36 amino acid synthetic peptide inhibitor DP178(SEQ ID:1) is shown to be non-cytotoxic to cells in culture, even at thehighest peptide concentrations (40 μg/ml) tested.

7.1. Materials and Methods

Cell proliferation and toxicity assay: Approximately 3.8×10⁵ CEM cellsfor each peptide concentration were incubated for 3 days at 37° C. inT25 flasks. Peptides tested were DP178 (SEQ ID:1) and DP-116 (SEQ ID:9),as described in FIG. 1. Peptides were synthesized as described, above,in Section 6.1. The concentrations of each peptide used were 0, 2.5, 10,and 40 μg/ml. Cell counts were taken at incubation times of 0, 24, 48,and 72 hours.

7.2. Results

Whether the potent HIV-1 inhibitor DP178 (SEQ ID:1) exhibited anycytotoxic effects was assessed by assaying the peptide's effects on theproliferation and viability of cells in culture. CEM cells wereincubated in the presence of varying concentrations of DP178 (SEQ ID:1),and DP-116 (SEQ ID:9), a peptide previously shown to be ineffective as aHIV inhibitor (Wild, C. et al., 1992, Proc. Natl. Acad. Sci. USA89:10,537-10,541). Additionally, cells were incubated in the absence ofeither peptide.

The results of the cytotoxicity study demonstrate that DP178 (SEQ ID:1)exhibits no cytotoxic effects on cells in culture. As can be seen,below, in Table XXIV, even the proliferation and viabilitycharacteristics of cells cultured for 3 days in the presence of thehighest concentration of DP178 (SEQ ID:1) tested (40 μg/ml) do notsignificantly differ from the DP-116 (SEQ ID:9) or the no-peptidecontrols. The cell proliferation data is also represented in graphicform in FIG. 6. As was demonstrated in the Working Example presentedabove in Section 6, DP178 (SEQ ID:1) completely inhibits HIV-1 mediatedsyncytia formation at peptide concentrations between 1 and 10 ng/ml, andcompletely inhibits cell-free viral infection at concentrations of atleast 90 ng/ml. Thus, this study demonstrates that even at peptideconcentrations greater than 3 log higher than the HIV inhibitory dose,DP178 (SEQ ID:1) exhibits no cytotoxic effects.

TABLE XXIV % Viability Peptide at time (hours) Peptide Concentrationμg/ml 0 24 48 72 DP178 40 98 97 95 97 (SEQ ID: 1) 10 98 97 98 98 2.5 9893 96 96 DP116 40 98 95 98 97 (SEQ ID: 9) 10 98 95 93 98 2.5 98 96 98 99No Peptide 0 98 97 99 98

8. EXAMPLE The Interaction of DP178 and DP107

Soluble recombinant forms of gp41 used in the example described belowprovide evidence that the DP178 peptide associates with a distal site ongp41 whose interactive structure is influenced by the DP107 leucinezipper motif. A single mutation disrupting the coiled-coil structure ofthe leucine zipper domain transformed the soluble recombinant gp41protein from an inactive to an active inhibitor of HIV-1 fusion. Thistransformation may result from liberation of the potent DP178 domainfrom a molecular clasp with the leucine zipper, DP107, determinant. Theresults also indicate that the anti-HIV activity of various gp41derivatives (peptides and recombinant proteins) may be due to theirability to form complexes with viral gp41 and interfere with itsfusogenic process.

8.1. Materials and Methods 8.1.1. Construction of Fusion Proteins andGP41 Mutants

Construction of fusion proteins and mutants shown in FIG. 7 wasaccomplished as follows: the DNA sequence corresponding to theextracellular domain of gp41 (540-686) was cloned into the Xmn I site ofthe expression vector pMal-p2 (New England Biolab) to give M41. The gp41sequence was amplified from pgtat (Malim et al., 1988, Nature 355:181-183) by using polymerase chain reaction (PCR) with upstream primer5′-ATGACGCTGACGGTACAGGCC-3′ (primer A) and downstream primer5′-TGACTAAGCTTAATACCACAGCCAATTTGTTAT-3′ (primer B). M41-P wasconstructed by using the T7-Gen in vitro mutagenesis kit from UnitedStates Biochemicals (USB) following the supplier's instructions. Themutagenic primer (5′-GGAGCTGCTTGGGGCCCCAGAC-3′) introduces an Ile to Promutation in M41 at position 578. M41Δ107, from which the DP-107 regionhas been deleted, was made using a deletion mutagenic primer5′-CCAAATCCCCAGGAGCTGCTCGAGCTGCACTATACCAGAC-3′ (primer C) following theUSB T7-Gen mutagenesis protocol. M41Δ178, from which the DP-178 regionhas been deleted, was made by cloning the DNA fragment corresponding togp41 amino acids 540-642 into the Xmn I site of pMal-p2. Primer A and5′-ATAGCTTCTAGATTAATTGTTAATTTCTCTGTCCC-3′ (primer D) were used in thePCR with the template pgtat to generate the inserted DNA fragments.M41-P was used as the template with primer A and D in PCR to generateM41-PΔ178. All inserted sequences and mutated residues were checked byrestriction enzyme analysis and confirmed by DNA sequencing.

8.1.2. Purification and Characterization of Fusion Proteins

The fusion proteins were purified according to the protocol described inthe manufacturer's brochure of protein fusion and purification systemsfrom New England Biolabs (NEB). Fusion proteins (10 ng) were analyzed byelectrophoresis on 8% SDS polyacrylamide gels. Western blotting analysiswas performed as described by Sambrook et al., 1989, Molecular Cloning:A Laboratory Manual, 2d Ed, Cold Spring Harbor Laboratory Press, ColdSpring Harbor, N.Y., Ch. 18, pp. 64-75. An HIV-1 positive serum diluted1000-fold, or a human Fab derived from repertoire cloning was used toreact with the fusion proteins. The second antibody was HRP-conjugatedgoat antihuman Fab. An ECL Western blotting detection system (Amersham)was used to detect the bound antibody. A detailed protocol for thisdetection system was provided by the manufacturer. Rainbow molecularweight markers (Amersham) were used to estimate the size of fusionproteins.

8.1.3. Cell Fusion Assays for Anti-HIV Activity

Cell fusion assays were performed as previously described (Matthews etal., 1987, Proc. Natl. Acad. Sci. USA 84: 5424-5481). CEM cells (7×10⁴)were incubated with HIV-1_(IIIB) chronically infected CEM cells (10⁴) in96-well flat-bottomed half-area plates (Costar) in 100 μl culturemedium. Peptide and fusion proteins at various concentrations in 10 μlculture medium were incubated with the cell mixtures at 37° C. for 24hours. Multinucleated syncytia were estimated with microscopicexamination. Both M41 and M41-P did not show cytotoxicity at theconcentrations tested and shown in FIG. 8.

Inhibition of HIV-1 induced cell-cell fusion activity was carried out inthe presence of 10 nM DP178 and various concentrations of M41Δ178 orM41-PΔ178 as indicated in FIG. 9. There was no observable syncytia inthe presence of 10 nM DP178. No peptide or fusion protein was added inthe control samples.

8.1.4. Elisa Analysis of DP178 Binding to the Leucine Zipper Motif ofGP41

The amino acid sequence of DP178 used is:YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF. For enzyme linked immunoassay(ELISA), M41Δ178 or M41-PΔ178 (5 μg/ml) in 0.1M NaHCO₃, pH 8.6, werecoated on 96 wells Linbro ELISA plates (Flow Lab, Inc.) overnight. Eachwell was washed three times with distilled water then blocked with 3%bovine serum albumin (BSA) for 2 hours. After blocking, peptides with0.5% BSA in TBST (40 mM Tris-HCl pH7.5, 150 mM NaCl, 0.05% Tween 20)were added to the ELISA plates and incubated at room temperature for 1hour. After washing three times with TBST, Fab-d was added at aconcentration of 10 ng/ml with 0.5% BSA in TBST. The plates were washedthree times with TBST after incubation at room temperature for 1 hour.Horse radish peroxidase (HRP) conjugated goat antihuman Fab antiserum ata 2000 fold dilution in TBST with 0.5% BSA was added to each well andincubated at room temperature for 45 minutes. The plates were thenwashed four times with TBST. The peroxidase substrate o-phenylenediamine (2.5 mg/ml) and 0.15% H₂O₂ were added to develop the color. Thereaction was stopped with an equal volume of 4.5 N H₂SO₄ afterincubation at room temperature for 10 minutes. The optical density ofthe stopped reaction mixture was measured with a micro plate reader(Molecular Design) at 490 nm. Results are shown in FIG. 10.

8.2. Results 8.2.1. The Expression and Characterization of theEctodomain of qp41

As a step toward understanding the roles of the two helical regions ingp41 structure and function, the ectodomain of gp41 was expressed as amaltose binding fusion protein (M41) (FIG. 7). The fusogenic peptidesequence at the N-terminal of gp41 was omitted from this recombinantprotein and its derivatives to improve solubility. The maltose bindingprotein facilitated purification of the fusion proteins under relativelymild, non-denaturing conditions. Because the M41 soluble recombinantgp41 was not glycosylated, lacked several regions of the transmembraneprotein (i.e., the fusion peptide, the membrane spanning, and thecytoplasmic domains), and was expressed in the absence of gp120, it wasnot expected to precisely reflect the structure of native gp41 on HIV-1virions. Nevertheless, purified M41 folded in a manner that preservedcertain discontinuous epitopes as evidenced by reactivity with humanmonoclonal antibodies, 98-6, 126-6, and 50-69, previously shown to bindconformational epitopes on native gp41 expressed in eukaryotic cells (Xuet al., 1991, J. Virol. 65: 4832-4838; Chen, 1994, J. Virol.68:2002-2010). Thus, at least certain regions of native gp41 defined bythese antibodies appear to be reproduced in the recombinant fusionprotein M41. Furthermore, M41 reacted with a human recombinant Fab(Fab-d) that recognizes a conformational epitope on gp41 and binds HIV-1virions as well as HIV-1 infected cells but not uninfected cells asanalyzed by FACS. Deletion of either helix motif, i.e., DP107 or DP178,of the M41 fusion protein eliminated reactivity with Fab-d. Theseresults indicate that both helical regions, separated by 60 amino acidsin the primary sequence, are required to maintain the Fab-d epitope.

8.2.2. Anti-HIV Activity of the Recombinant Ectodomain of GP41

The wild type M41 fusion protein was tested for anti-HIV-1 activity. Asexplained, supra, synthetic peptides corresponding to the leucine zipper(DP107) and the C-terminal putative helix (DP178) show potent anti-HIVactivity. Despite inclusion of both these regions, the recombinant M41protein did not affect HIV-1 induced membrane fusion at concentrationsas high as 50 μM (Table XXV, below).

TABLE XXV DISRUPTION OF THE LEUCINE ZIPPER OF GP41 FREES THE ANTI-HIVMOTIF DP107 DP178 M41 M41-P M41-PΔ178 Cell fusion 1 μM 1 nM >50 μM 83nM >50 μM (IC₉₀) Fab-D — — 3.5 × 10⁻⁹ 2.5 × 10⁻⁸ — binding (k_(D)) HIVinfectiv- 1 μM 80 nM >16 μM 66 nM >8 μM ity (IC₉₀) ¹The affinityconstants of Fab-d binding to the fusion proteins were determined usinga protocol described by B. Friguet et al., 1985, J. Immunol. Method.77:305-319. — = No detectable binding of Fab-d to the fusion proteins.Antiviral Infectivity Assays. 20 μl of serially diluted virus stock wasincubated for 60 minutes at ambient temperature with 20 μl of theindicatedconcentration of purified recombinant fusion protein in RPMI1640 containing 10% fetal bovine serum and antibiotics in a 96-wellmicroteter plate. 20 μl of CEM4 cells at 6 × 10⁵ cells/ml were added toeach well, and cultures were incubated at 37° C. in a humidified CO₂incubator. Cells were cultured for 9 days by the # addition of freshmedium every 2 to 3 days. On days 5, 7, and 9 postinfection, supernatantsamples were assayed for reverse transcriptase (RT) activity, asdescribed below, to minitor viral replication. The 50% tissue cultureinfectious dose (TCID₅₀) was calculated for each condition according tothe formula of Reed & Muench, 1937, Am. J. Hyg. 27:493-497. RT activitywas determined by a modification of the published methods of Goff etal., 1981, J. Virol. 38:239-248 and Willey et al., # 1988, J. Virol.62:139-147 as described in Chen et al., 1993, AIDS Res. HumanRetroviruses 9:1079-1086.

Surprisingly, a single amino acid substitution, proline in place ofisoleucine in the middle of the leucine zipper motif, yielded a fusionprotein (M41-P) which did exhibit antiviral activity (Table XXV and FIG.8). As seen in Table XXV, M41-P blocked syncytia formation by 90% atapproximately 85 nM and neutralized HIV-1_(IIIB) infection by 90% atapproximately 70 nM concentrations. The anti-HIV-1 activity of M41-Pappeared to be mediated by the C-terminal helical sequence sincedeletion of that region from M41-P yielded an inactive fusion protein,M41-PΔ178 (Table XXV). This interpretation was reinforced by experimentsdemonstrating that a truncated fusion protein lacking the DP178sequence, M41Δ178, abrogated the potent anti-fusion activity of theDP178 peptide in a concentration-dependent manner (FIG. 9). The sametruncated fusion protein containing the proline mutation disrupting theleucine zipper, M41-PΔ178, was not active in similar competitionexperiments (FIG. 9). The results indicate that the DP178 peptideassociates with a second site on gp41 whose interactive structure isdependent on a wild type leucine zipper sequence. A similar interactionmay occur within the wild type fusion protein, M41, and act to form anintramolecular clasp which sequesters the DP178 region, making itunavailable for anti-viral activity.

A specific association between these two domains is also indicated byother human monoclonal Fab-d studies. For example, Fab-d failed to bindeither the DP178 peptide or the fusion protein M41Δ178, but its epitopewas reconstituted by simply mixing these two reagents together (FIG.10). Again, the proline mutation in the leucine zipper domain of thefusion protein, M41-PΔ178, failed to reconstitute the epitope in similarmixing experiments.

9. EXAMPLE Method for Computer-assisted Identification of DP107-Like andDP178-Like Sequences

A number of known coiled-coil sequences have been well described in theliterature and contain heptad repeat positioning for each amino acid.Coiled-coil nomenclature labels each of seven amino acids of a heptadrepeat A through G, with amino acids A and D tending to be hydrophobicpositions. Amino acids E and G tend to be charged. These four positions(A, D, E, and G) form the amphipathic backbone structure of a monomericalpha-helix. The backbones of two or more amphipathic helices interactwith each other to form di-, tri-, tetrameric, etc., coiled-coilstructures. In order to begin to design computer search motifs, a seriesof well characterized coiled coils were chosen including yeasttranscription factor GCN4, Influenza Virus hemagglutinin loop 36, andhuman proto-oncogenes c-Myc, c-Fos, and c-Jun. For each peptidesequence, a strict homology for the A and D positions, and a list of theamino acids which could be excluded for the B, C, E, F, and G positions(because they are not observed in these positions) was determined.Motifs were tailored to the DP107 and DP178 sequences by deducing themost likely possibilities for heptad positioning of the amino acids ofHIV-1 Bru DP-107, which is known to have coiled-coil structure, andHIV-1 Bru DP178, which is still structurally undefined. The analysis ofeach of the sequences is contained in FIG. 12. For example, the motiffor GCN4 was designed as follows:

-   1. The only amino acids (using standard single letter amino acid    codes) found in the A or D positions of GCN4 were [LMNV].-   2. All amino acids were found at B, C, E, F, and G positions except    {CFGIMPTW}.-   3. The PESEARCH motif would, therefore, be written as follows:    -   [LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-    -   [LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-    -   [LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)-    -   [LMNV]-{CFGIMPTW}(2)-[LMNV]-{CFGIMPTW}(3)        Translating or reading the motif: “at the first A position        either L, M, N, or V must occur; at positions B and C (the next        two positions) accept everything except C, F, G, I, M, P, T, or        W; at the D position either L, M, N, or V must occur; at        positions E, F, and G (the next 3 positions) accept everything        except C, F, G, I, M, P, T, or W.” This statement is contained        four times in a 28-mer motif and five times in a 35-mer motif.        The basic motif key then would be: [LMNV]-{CFGIMPTW}. The motif        keys for the remaining well described coiled-coil sequences are        summarized in FIG. 12.

The motif design for DP107 and DP178 was slightly different than the28-mer model sequences described above due to the fact that heptadrepeat positions are not defined and the peptides are both longer than28 residues. FIG. 13 illustrates several possible sequence alignmentsfor both DP107 and DP178 and also includes motif designs based on28-mer, 35-mer, and full-length peptides. Notice that only slightdifferences occur in the motifs as the peptides are lengthened.Generally, lengthening the base peptide results in a less stringentmotif. This is very useful in broadening the possibilities foridentifying DP107-or DP-178-like primary amino acid sequences referredto in this document as “hits”.

In addition to making highly specific motifs for each type peptidesequence to be searched, it is also possible to make “hybrid” motifs.These motifs are made by “crossing” two or more very stringent motifs tomake a new search algorithm which will find not only both “parent” motifsequences but also any peptide sequences which have similarities to one,the other, or both “parents”. For example, in FIG. 14 the “parent”sequence of GCN4 is crossed with each of the possible “parent” motifs ofDP-107. Now the hybrid motif must contain all of the amino acids foundin the A and D positions of both parents, and exclude all of the aminoacids not found in either parent at the other positions. The resultinghybrid from crossing GCN4 or [LMNV] {CFGIMPTW} and DP107 (28-mer withthe first L in the D position) or [ILQT] {CDFIMPST}, is [ILMNQTV]{CFIMPT}. Notice that now only two basic hybrid motifs exist which coverboth framing possibilities, as well as all peptide lengths of the parentDP-107 molecule. FIG. 15 represents the “hybridizations” of GCN4 withDP-178. FIG. 16 represents the “hybridizations” of DP107 and DP178. Itis important to keep in mind that the represented motifs, both parentand hybrid, are motif keys and not the depiction of the full-lengthmotif needed to actually do the computer search.

Hybridizations can be performed on any combination of two or moremotifs. FIG. 17 summarizes several three-motif hybridizations includingGCN4, DP107 (both frames), and DP178 (also both frames). Notice that theresulting motifs are now becoming much more similar to each other. Infact, the first and third hybrid motifs are actually subsets of thesecond and fourth hybrid motifs respectively. This means that the firstand third hybrid motifs are slightly more stringent than the second andfourth. It should also be noted that with only minor changes in thesefour motifs, or by hybridizing them, a single motif could be obtainedwhich would find all of the sequences. However, it should be rememberedthat stringency is also reduced. Finally, the most broad-spectrum andleast-stringent hybrid motif is described in FIG. 18 which summarizesthe hybridization of GCN4, DP107 (both frames), DP178 (both frames),c-Fos, c-Jun, c-Myc, and Flu loop 36.

A special set of motifs was designed based on the fact that DP-178 islocated only approximately ten amino acids upstream of the transmembranespanning region of gp41 and just C-terminal to a proline which separatesDP107 and DP178. It has been postulated that DP178 may be an amphipathichelix when membrane associated, and that the proline might aid in theinitiation of the helix formation. The same arrangement was observed inRespiratory Syncytial Virus; however, the DP178-like region in thisvirus also had a leucine zipper just C-terminal to the proline.Therefore, N-terminal proline-leucine zipper motifs were designed toanalyze whether any other viruses might contain this same pattern. Themotifs are summarized in FIG. 19.

The PC/Gene protein database contains 5879 viral amino acid sequences(library file PVIRUSES; CD-ROM release 11.0). Of these, 1092 are viralenveloped or glycoprotein sequences (library file PVIRUSE1). Tables Vthrough XIV contain lists of protein sequence names and motif hitlocations for all the motifs searched.

10. EXAMPLE Computer-assisted Identification of DP107 and DP178-LikeSequences in Human Immunodrficiency Virus

FIG. 20 represents search results for HIV-1 BRU isolate gp41 (PC/Geneprotein sequence PENV_HV1BR). Notice that the hybrid motif which crossesDP-107 and DP-178 (named 107x178x4; the same motif as found in FIG. 16found three hits including amino acids 550-599, 636-688, and 796-823.These areas include DP-107 plus eight N-terminal and four C-terminalamino acids; DP178 plus seven N-terminal and ten C-terminal amino acids;and an area inside the transmembrane region (cytoplasmic). FIG. 20 alsocontains the results obtained from searching with the motif namedALLMOTI5, for which the key is found in FIG. 17 .({CDGHP} {CFP}x5). Thismotif also found three hits including DP107 (amino acids 510-599), DP178(615-717), and a cytoplasmic region (772-841). These hits overlap thehits found by the motif 107x178x4 with considerable additional sequenceson both the amino and carboxy termini. This is not surprising in that107x178x4 is a subset of the ALLMOTI5 hybrid motif. Importantly, eventhough the stringency of ALLMOTI5 is considerably less than 107x178x4,it still selectively identifies the DP107 and DP178 regions of gp41shown to contain sequences for inhibitory peptides of HIV-1. The resultsof these two motif searches are summarized in Table V under the PC/Geneprotein sequence name PENV HV1BR. The proline-leucine zipper motifs alsogave several hits in HIV-1 BRU including 503-525 which is at the veryC-terminus of gp120, just upstream of the cleavage site (P7LZIPC andP12LZIPC); and 735-768 in the cytoplasmic domain of gp41 (P23LZIPC).These results are found in Tables VIII, IX, and X under the samesequence name as mentioned above. Notice that the only area of HIV-1 BRUwhich is predicted by the Lupas algorithm to contain a coiled-coilregion, is from amino acids 635-670. This begins eight amino acidsN-terminal to the start and ends eight amino acids N-terminal to the endof DP178. DP107, despite the fact that it is a known coiled coil, is notpredicted to contain a coiled-coil region using the Lupas method.

11. EXAMPLE Computer-assisted Identification of DP107-Like andDP178-Like Sequences in Human Respiratory Syncytial Virus

FIG. 21 represents search results for Human Respiratory Syncytial Virus(RSV; Strain A2) fusion glycoprotein F1 (PC/Gene protein sequence namePVGLF_HRSVA). Motif 107x178x4 finds three hits including amino acids152-202, 213-243, and 488-515. The arrangement of these hits is similarto what is found in HIV-1 except that the motif finds two regions withsimilarities to DP-178, one just downstream of what would be called theDP107 region or amino acids 213-243, and one just upstream of thetransmembrane region (also similar to DP178) or amino acids 488-515.Motif ALLMOTI5 also finds three areas including amino acids 116-202,267-302, and 506-549. The proline-leucine zipper motifs also gaveseveral hits including amino acids 205-221 and 265-287 (PILZIPC 265-280,P12LZIPC), and 484-513 (P7LZIPC and P12LZIPC 484-506, P23LZIPC). Noticethat the PLZIP motifs also identify regions which share locationsimilarities with DP-178 of HIV-1.

12. EXAMPLE Computer-assisted Identification of DP107-Like andDP178-Like Sequences in Simian Immunodeficiency Virus

Motif hits for Simian immunodeficiency Virus gp41(AGM3 isolate; PC/Geneprotein sequence name PENV_SIVAG) are shown in FIG. 22. Motif 107x178x4finds three hits including amino acids 566-593, 597-624, and 703-730.The first two hits only have three amino acids between them and couldprobably be combined into one hit from 566-624 which would represent aDP107-like hit. Amino acids 703 to 730 would then represent a DP178-likehit. ALLMOTI5 also finds three hits including amino acids 556-628(DP107-like), 651-699 (DP178-like), and 808-852 which represents thetransmembrane spanning region. SIV also has one region from 655-692 witha high propensity to form a coiled coil as predicted by the Lupasalgorithm. Both 107x178x4 and ALLMOTI5 motifs find the same region. SIVdoes not have any PLZIP motif hits in gp41.

The identification of DP178/DP107 analogs for a second SIV isolate(MM251) is demonstrated in the Example presented, below, in Section 19.

13. EXAMPLE Computer-assisted Identification of DP107-Like and DP178Like Sequences in Canine Distemper Virus

Canine Distemper Virus (strain Onderstepoort) fusion glycoprotein F1(PC/Gene Protein sequence name PVGLF_CDVO) has regions similar to HumanRSV which are predicted to be DP107-like and DP178-like (FIG. 23). Motif107x178x4 highlights one area just C-terminal to the fusion peptide atamino acids 252-293. Amino acids 252-286 are also predicted to be coiledcoil using the Lupas algorithm. Almost 100 amino acids C-terminal to thefirst region is a DP178-like area at residues 340-367. ALLMOTI5highlights three areas of interest including: amino acids 228-297, whichcompletely overlaps both the Lupas prediction and the DP107-like107x178x4 hit; residues 340-381, which overlaps the second 107x178x4hit; and amino acids 568-602, which is DP178-like in that it is locatedjust N-terminal to the transmembrane region. It also overlaps anotherregion (residues 570-602) predicted by the Lupas method to have a highpropensity to form a coiled coil. Several PLZIP motifs successfullyidentified areas of interest including P6 and P12LZIPC which highlightresidues 336-357 and 336-361 respectively; P1 and P12LZIPC which findresidues 398-414; and P12 and P23LZIPC which find residues 562-589 and562-592 respectively.

14. EXAMPLE Computer-assisted Identification of DP107-Like andDP178-Like Sequences in Newcastle Disease Virus

FIG. 24 shows the motif hits found in Newcastle Disease Virus (strainAustralia-Victoria/32; PC Gene protein sequence name PVGLF_NDVA). Motif107x178x4 finds two areas including a DP107-like hit at amino acids151-178 and a DP178-like hit at residues 426-512. ALLMOTI5 finds threeareas including residues 117-182, 231-272, and 426-512. The hits from426-512 include a region which is predicted by the Lupas method to havea high coiled-coil propensity (460-503). The PLZIP motifs identify onlyone region of interest at amino acids 273-289 (P1 and 12LZIPC).

15. EXAMPLE Computer-assisted Identification of DP107-Like andDP178-Like Sequences in Human Parainfluenza Virus

Both motifs 107x178x4 and ALLMOTI5 exhibit DP107-like hits in the sameregion, 115-182 and 117-182 respectively, of Human Parainfluenza Virus(strain NIH 47885; PC/Gene protein sequence name PVGLF_p13H4; (FIG. 25).In addition, the two motifs have a DP178-like hit just slightlyC-terminal at amino acids 207-241. Both motifs also have DP178-like hitsnearer the transmembrane region including amino acids 457-497 and462-512 respectively. Several PLZIP motif hits are also observedincluding 283-303 (P5LZIPC), 283-310 (P12LZIPC), 453-474 (P6LZIPC), and453-481 (P23LZIPC). The Lupas algorithm predicts that amino acids122-176 may have a propensity to form a coiled-coil.

16. EXAMPLE Computer-assisted Identification of DP107-Like andDP178-Like Sequences of influenza A Virus

FIG. 26 illustrates the Lupas prediction for a coiled coil in InfluenzaA Virus (strain A/Aichi/2/68) at residues 379-436, as well as the motifhits for 107x178x4 at amino acids 387-453, and for ALLMOTI5 at residues380-456. Residues 383-471 (38-125 of HA2) were shown by Carr and Kim tobe an extended coiled coil when under acidic pH (Carr and Kim, 1993,Cell 73: 823-832). The Lupas algorithm predicts a coiled-coil atresidues 379-436. All three methods successfully predicted the regionshown to actually have coiled-coil structure; however, ALLMOTI5predicted the greatest portion of the 88 residue stretch.

17. EXAMPLE Potential Respiratory Syncytial Virus DP178/DP107 Analogs:CD and Antiviral Characterization

In the Example presented herein, respiratory syncytial virus (RSV)peptides identified by utilizing the computer-assisted search motifsdescribed in the Examples presented in Sections 9 and 11, above, weretested for anti-RSV activity. Additionally, circular dichroism (CD)structural analyses were conducted on the peptides, as discussed below.It is demonstrated that several of the identified peptides exhibitpotent antiviral capability. Additionally, it is shown that several ofthese peptides exhibit a substantial helical character.

17.1 Materials and Methods

Structural analyses: The CD spectra were measured in a 10 mM sodiumphosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptides were synthesizedaccording to the methods described, above, in Section 6.1. Peptideconcentrations were determined from A₂₈₀ using Edlehoch's method (1967,Biochemistry 6:1948).

Anti-RSV antiviral activity assays: The assay utilized herein tested theability of the peptides to disrupt the ability of HEp2 cells acutelyinfected with RSV (i.e., cells which are infected with a multiplicity ofinfection of greater than 2) to fuse and cause syncytial formation on amonolayer of uninfected an uninfected line of Hep-2 cells. The lower theobserved level of fusion, the greater the antiviral activity of thepeptide was determined to be.

Uninfected confluent monolayers of Hep-2 cells were grown in microtiterwells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [BioWhittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which hadbeen heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No.14-501F) supplemented at 3%, antibiotics (penicillin/streptomycin; BioWhittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures ofacutely infected Hep2 cells were washed with DPBS (Dulbecco's PhosphateBuffered Saline w/o calcium or magnesium; Bio Whittaker Cat. No.17-512F) and cell monolayers were removed with Versene (1:5000; GibcoLife Technologies Cat. No. 15040-017). The cells were spun 10 minutesand resuspended in 3% FBS. Cell counts were performed using ahemacytometer. Persistent cells were added to the uninfected Hep-2cells.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Hep-2 cells, then adding peptides (at thedilutions described below) in 3% EMEM, and 100 acutely RSV-infected Hep2cells per well. Wells were then incubated at 37° C. for 48 hours.

After incubation, cells in control wells were checked for fusioncenters, media was removed from the wells, followed by addition, to eachwell, of either Crystal Violet stain or XTT. With respect to CrystalViolet, approximately 50 μl 0.25% Crystal Violet stain in methanol wereadded to each well. The wells were rinsed immediately, to remove excessstain, and were allowed to dry. The number of syncytia per well werethen counted, using a dissecting microscope.

With respect to XTT(2,3-bis[2-Methoxy-4-nitro-5-sulfophenyl]-2H-tetrazolium-5-carboxyanilideinner salt), 50 μl XTT (1 mg/ml in RPMI buffered with 100 mM HEPES, pH7.2-7.4, plus 5% DMSO) were added to each well. The OD_(450/690) wasmeasured (after blanking against growth medium without cells orreagents, and against reagents) according to standard procedures.

Peptides: The peptides characterized in the study presented herein were:

-   1) peptides T-142 to T-155 and T-575, as shown in FIG. 27A, and    peptides T-22 to T-27, T-68, T-334 and T-371 to T-375 and T-575, as    shown in FIG. 27B;-   2) peptides T-120 to T-141 and T-576, as shown in FIG. 27B, and    peptides T-12, T-13, T-15, T-19, T-28 to T-30, T-66, T-69, T-70 and    T-576, as shown in FIG. 27D; and-   3) peptides T-67 and T-104 to T-119 and T-384, as shown in FIG. 28A,    and peptides T-71, T-613 to T-617, T-662 to T-676 and T-730, as    shown in FIG. 28B.

The peptides of group 1 represent portions of the RSV F2 proteinDP178/107-like region. The peptides of group 2 represent portions of theRSV F1 protein DP107-like region. The peptides of groups 3 representportions of the RSV F1 protein DP178-like region.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used. The IC₅₀ data for each peptiderepresents the average of several experiments conducted utilizing thatpeptide.

17.2 Results

The data summarized in FIGS. 27A-B and 28A-B represent antiviral andstructural information obtained from peptides derived from the RSV F2DP178/DP107-like F2 region (FIGS. 27A-B), the RSV F1DP-107-like region(FIG. 27C-D) and the RSV DP178-like F2 region (FIGS. 28A-B).

As shown in FIGS. 27A-D, a number of the RSV DP178/DP107-like peptidesexhibited a detectable level of antiviral activity. Peptides from theRSV DP178/DP107-like F2 region (FIGS. 27A-B), for example, T-142 toT-145 and T-334 purfied peptides, exhibited detectable levels ofantiviral activity, as evidenced by their IC₅₀ values. Further, a numberof RSV F1DP107-like peptides (FIGS. 27C-D) exhibited a sizable level ofantiviral activity as purified peptides, including, for example,peptides T-124 to T-127, T-131, T-135 and T-137 to T-139, asdemonstrated by their low IC₅₀ values. In addition, CD analysis FIGS.27A, 27C) reveals that many of the peptides exhibit some detectablelevel of helical structure.

The results summarized in FIGS. 28A-B demonstrate that a number ofDP178-like purified peptides exhibit a range of potent anti-viralactivity. These peptides include, for example, T-67, T-104, T-105 andT-107 to T-119, as listed in FIG. 28A, and T-665 to T-669 and T-671 toT-673, as listed in FIG. 28B. In addition, some of the DP178-likepeptides exhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove,successfully identified viral peptide domains that represent highlypromising anti-RSV antiviral compounds.

18. EXAMPLE Potential Human Parainfluenza Virus Type 3 DP178/DP107Analogs: CD and Antiviral Characterization

In the Example presented herein, human parainfluenza virus type 3(HPIV3) peptides identified by utilizing the computer-assisted searchmotifs described in the Examples presented in Sections 9 and 15, above,were tested for anti-HPIV3 activity. Additionally, circular dichroism(CD) structural analyses were conducted on the peptides, as discussedbelow. It is demonstrated that several of the identified peptidesexhibit potent antiviral capability. Additionally, it is shown thatseveral of these peptides exhibit a substantial helical character.

18.1 Materials and Methods

Structural analyses: Structural analyses consisted of circular dichroism(CD) studies. The CD spectra were measured in a 10 mM sodium phosphate,150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptide concentrations weredetermined from A₂₈₀ using Edlehoch's method (1967, Biochemistry6:1948).

Anti-HPIV3 antiviral activity assays: The assay utilized herein testedthe ability of the peptides to disrupt the ability of Hep2 cellschronically infected with HPIV3 to fuse and cause syncytial formation ona monolayer of an uninfected line of CV-1W cells. The more potent thelower the observed level of fusion, the greater the antiviral activityof the peptide.

Uninfected confluent monolayers of CV-1W cells were grown in microtiterwells in 3% EMEM (Eagle Minimum Essential Medium w/o L-glutamine [BioWhittaker Cat. No. 12-125F], with fetal bovine serum [FBS; which hadbeen heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat. No.14-501F) supplemented at 3%, antibiotics/antimycotics (Gibco BRL LifeTechnologies Cat. No. 15040-017) added at 1%, and glutamine added at 1%.

To prepare Hep2 cells for addition to uninfected cells, cultures ofchronically infected Hep2 cells were washed with DPBS (Dulbecco'sPhosphate Buffered Saline w/o calcium or magnesium; Bio Whittaker Cat.No. 17-512F) and cell monolayers were removed with Versene (1:5000;Gibco Life Technologies Cat. No. 15040-017). The cells were spun 10minutes and resuspended in 3% FBS. Cell counts were performed using ahemacytometer. Persistent cells were added to the uninfected CV-1Wcells.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected CV-1W cells, then adding peptides (at thedilutions described below) in 3% EMEM, and 500 chronicallyHPIV3-infected Hep2 cells per well. Wells were then incubated at 37° C.for 24 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed immediately, to remove excess stain and were then allowed to dry.The number of syncytia per well were then counted, using a dissectingmicroscope.

Alternatively, instead of Crystal Violet analysis, cells were assayedwith XTT, as described, above, in Section 17.1.

Peptides: The peptides characterized in the study presented herein were:

-   1) Peptides 157 to 188, as shown in FIG. 29A, and peptides T-38 to    T-40, T-42 to T-46 and T-582, as shown in FIG. 29B. These peptides    are derived from the DP107 region of the HPIV3 F1 fusion protein    (represented by HPF3 107, as shown in FIG. 29A); and-   2) Peptides 189 to 210, as shown in FIG. 30A, and T-269, T-626,    T-383 and T-577 to T-579, as shown in FIG. 30B. These peptides are    primarily derived from the DP178 region of the HPIV3 F1 fusion    protein (represented by HPF3 178, as shown in FIG. 30A). Peptide    T-626 contains two mutated amino acid resides (represented by a    shaded background). Additionally, peptide T-577 represents F1 amino    acids 65-100, T-578 represents F1 amino acids 207-242 and T-579    represents F1 amino acids 273-309.

Each peptide was tested at 2-fold serial dilutions ranging from 500μg/ml to approximately 500 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

18.2 Results

The data summarized in FIGS. 29A-B and 30A-B represent antiviral andstructural information obtained from peptides derived from the HPIV3fusion protein DP107-like region (FIGS. 29A-C) and the HPIV3 fusionprotein DP178-like region (FIGS. 30A-B).

As shown in FIG. 29A-B, a number of the HPIV3 DP107-like peptidesexhibited potent levels of antiviral activity. These peptides include,for example, peptides T-40, T-172 to T-175, T-178, T-184 and T-185.

CD analysis reveals that a number of the peptides exhibit detectable tosubstantial level of helical structure.

The results summarized in FIGS. 30A-B demonstrate that a number of theDP178-like peptides tested exhibit a range of anti-viral activity. Thesepeptides include, for example, peptides 194 to 211, as evidenced bytheir low IC₅₀ values. In fact, peptides 201 to 205 exhibit IC₅₀ valuesin the nanogram/ml range. In addition, many of the DP178-like peptidesexhibited some level of helicity.

Thus, the computer assisted searches described, hereinabove, havesuccessfully identified viral peptide domains that represent highlypromising anti-HPIV3 antiviral compounds.

19. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inSimian Immodefeficiency Virus

FIG. 31 represents search results for SIV isolate MM251 (PC/Gene®protein sequence PENV_SIVM2). Both 107×178×4 and ALLMOTI5 search motifsidentified two regions with similarities to DP107 and/or DP178.

The peptide regions found by 107x178x4 were located at amino acidresidues 156-215 and 277-289. The peptide regions found by ALLMOTI5 werelocated at amino acid residues 156-219 and 245-286. Both motifs,therefore, identify similar regions.

Interestingly, the first SIV peptide region (i.e., from amino acidresidue 156 to approximately amino acid residue 219) correlates with aDP107 region, while the second region identified (i.e., fromapproximately amino acid residue 245 to approximately amino acid residue289) correlates with the DP178 region of HIV. In fact, an alignment ofSIV isolate MM251 and HIV isolate BRU, followed by a selection of thebest peptide matches for HIV DP107 and DP178, reveals that the bestmatches are found within the peptide regions identified by the 107x178x4and ALLMOTI5 search motifs.

It should be noted that a potential coiled-coil region at amino acidresidues 242-282 is predicted by the Lupas program. This is similar tothe observation in HIV in which the coiled-coil is predicted by theLupas program to be in the DP178 rather than in the DP107 region. It ispossible, therefore, that SIV may be similar to HIV in that it maycontain a coiled-coil structure in the DP107 region, despite such astructure being missed by the Lupas algorithm. Likewise, it may be thatthe region corresponding to a DP178 analog in SIV may exhibit anundefined structure, despite the Lupas program's prediction of acoiled-coil structure.

20. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inEpstein-Barr Virus

The results presented herein describe the identification of DP178/DP107analogs within two different Epstein-Barr Virus proteins. Epstein-Barris a human herpes virus which is the causative agent of, for example,infectious mononucleosis (IM), and is also associated withnasopharyngeal carcinomas (NPC), Burkitt's lymphoma and other diseases.The virus predominantly exists in the latent form and is activated by avariety of stimuli.

FIG. 32 depicts the search motif results for the Epstein-Barr Virus(Strain B95-8; PC/Gene® protein sequence PVGLB_EBV) glycoprotein gp110precursor (gp115). The 107x178x4 motif identified two regions ofinterest, namely the regions covered by amino acid residues 95-122 and631-658. One PZIP region was identified at amino acid residue 732-752which is most likely a cytoplasmic region of the protein. The Lupasalgorithm predicts a coiled-coil structure for amino acids 657-684. NoALLMOTI5 regions were identified.

FIG. 33 depicts the search motif results for the Zebra (or EB1)trans-activator protein (BZLF1) of the above-identified Epstein-Barrvirus. This protein is a transcription factor which represents theprimary mediator of viral reactivation. It is a member of the b-ZIPfamily of transcription factors and shares significant homology with thebasic DNA-binding and dimerization domains of the cellular oncogenesc-fos and C/EBP. The Zebra protein functions as a homodimer.

Search results demonstrate that the Zebra protein exhibits a singleregion which is predicted to be either of DP107 or DP178 similarity, andis found between the known DNA binding and dimerization regions of theprotein. Specifically, this region is located at amino acid residues193-220, as shown in FIG. 33. The Lupas program predicted no coiled-coilregions.

21. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inMeasles Virus

FIG. 34 illustrates the motif search results for the fusion protein F1of measles virus, strain Edmonston (PC Gene® protein sequencePVGLF_MEASE), successfully identifying DP178/DP107 analogs.

The 107x178x4 motif identifies a single region at amino acid residues228-262. The ALLMOTI5 search motif identifies three regions, includingamino acid residues 116-184, 228-269 and 452-500. Three regionscontaining proline residues followed by a leucine zipper-like sequencewere found beginning at proline residues 214, 286 and 451.

The Lupas program identified two regions it predicted had potential forcoiled-coil structure, which include amino acid residues 141-172 and444-483.

22. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inHepatitis B Virus

FIG. 35 depicts the results of a PZIP motif search conducted on theHepatitis B virus subtype AYW. Two regions of interest within the majorsurface antigen precursor S protein were identified. The first lies justC-terminal to the proposed fusion peptide of the major surface antigen(Hbs) which is found at amino acid residues 174-191. The second regionis located at amino acid residues 233-267. The Lupas program predicts nocoiled-coil repeat regions.

In order to test the potential anti-HBV antiviral activity of theseD178/DP107 analog regions, peptides derived from area around the analogregions are synthesized, as shown in FIGS. 52A-B. These peptidesrepresent one amino acid peptide “walks” through the putativeDP178/DP107 analog regions. The peptides are synthesized according tostandard Fmoc chemistry on Rinkamide MBHA resins to provide for carboxyterminal blockade (Chang, C. D. and Meinhofer, J., 1978, Int. J. Pept.Protein Res. 11:246-249; Fields, G. B. and Noble, R. L., 1990, Int. J.Pept. Protein Res. 35:161-214). Following complete synthesis, thepeptide amino-terminus is blocked through automated acetylation and thepeptide is cleaved with trifluoroacetic acid (TFA) and the appropriatescavengers (King, D. S. et al., 1990, Int. J. Pept. Res. 36:255-266).After cleavage, the peptide is precipitated with ether and dried undervacuum for 24 hours.

The anti-HBV activity of the peptides is tested by utilizing standardassays to determine the test peptide concentration required to cause anacceptable (e.g., 90%) decrease in the amount of viral progeny formed bycells exposed to an HBV viral inoculum. Candidate antivial peptides arefurther characterized in model systems such as wood chuck tissue cultureand animal systems, prior to testing on humans.

23. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inSimian Mason-Pfizer Monkey Virus

The results depicted herein illustrate the results of search motifsconducted on the Simian Mason-Pfizer monkey virus. The motifs revealDP178/DP107 analogs within the enveloped (TM) protein GP20, as shown inFIG. 36.

The 107x178x4 motifs identifies a region at amino acid residues 422-470.The ALLMOTI5 finds a region at amino acid residues 408-474. The Lupasprogram predicted a coiled-coil structure a amino acids 424-459.

24. EXAMPLE Computer-assisted Identification of DP178/DP107 Analogs inBacterial Proteins

The results presented herein demonstrate the identification ofDP178/DP107 analogs corresponding to sequences present in proteins of avariety of bacterial species.

FIG. 37 depicts the search motif results for the Pseudomonas aeruginosafimbrial protein (Pilin). Two regions were identified by motifs107x178x4 and ALLMOTI5. The regions located at amino acid residues 30-67and 80-144 were identified by the 107x178x4 motif. The regions at aminoacid residues 30-68 and 80-125 were identified by the ALLMOTI5.

FIG. 38 depicts the search motif results for the Pseudomonas gonorrhoeaefimbrial protein (Pilin). A single region was identified by both the107x178x4 and the ALLMOTI5 motifs. The region located at amino acidresidues 66-97 was identified by the 107x178x⁴ motif. The region locatedat amino acid residues 66-125 were identified by the ALLMOTI5 searchmotif. No coiled-coil regions were predicted by the Lupas program.

FIG. 39 depicts the search motif results for the Hemophilus Influenzafimbrial protein (Pilin). A single region was identified by both the107x178x4 and the ALLMOTI5 motifs. The region located at amino acidresidues 102-129 was identified by the 107x178x4 motif. The regionlocated at amino acid residues 102-148 were identified by the ALLMOTI5search motif. No coiled-coil regions were predicted by the Lupasprogram.

FIG. 40 depicts the search motif results for the Staphylococcus aureustoxic shock syndrome Hemophilus Influenza fimbrial protein (Pilin). Asingle region was identified by both the 107x178x4 and the ALLMOTI5motifs. The region located at amino acid residues 102-129 was identifiedby the 107x178x4 motif. The region located at amino acid residues102-148 were identified by the ALLMOTI5 search motif. No coiled-coilregions were predicted by the Lupas program.

FIG. 41 summarizes the motif search results conducted on theStaphylococcus aureus enterotoxin Type E protein. These resultsdemonstrate the successful identification of DP178/DP107 analogscorresponding to peptide sequences within this protein, as describedbelow.

The ALLMOTI5 motif identified a region at amino acid residues 22-27. The107x178x4 motif identified two regions, with the first at amino acidresidues 26-69 and the second at 88-115. A P12LZIPC motif searchidentified two regions, at amino acid residues 163-181 and 230-250.

The Lupas program predicted a region with a high propensity for coilingat amino acid residues 25-54. This sequence is completely containedwithin the first region identified by both ALLMOTI5 and 107x178x4motifs.

FIG. 42 depicts the search motif results conducted on a secondStaphylococcus aureus toxin, enterotoxin A. Two regions were identifiedby the ALLMOTI5 motif, at amino acid residues 22-70 and amino acidresidues 164-205. The 107x178x4 motif found two regions, the first atamino acid residues 26-69 and the second at amino acid residues 165-192.A P23LZIPC motif search revealed a region at amino acid residues216-250. No coiled-coil regions were predicted by the Lupas program.

FIG. 43 shows the motif search results conducted on the E. coli heatlabile enterotoxin A protein, demonstrating that identification ofDP178/DP107 analogs corresponding to peptides located within thisprotein. Two regions were identified by the ALLMOTI5 motif, with thefirst residing at amino acid residues 55-115, and the second residing atamino acid residues 216-254. The 107x178x4 motif identified a singleregion at amino acid residues 78-105. No coiled-coil regions werepredicted by the Lupas program.

25. EXAMPLE Computer-assisted Identification of DP178/DP107 AnalogsWithin Various Human Proteins

The results presented herein demonstrate the identification ofDP178/DP107 analogs corresponding to peptide sequences present withinseveral different human proteins.

FIG. 44 illustrates the search motif results conducted on the humanc-fos oncoprotein. The ALLMOTI5 motif identified a single region atamino acid residues 155-193. The 107x178x4 motif identified one regionat amino acid residues 162-193. The Lupas program predicted a region atamino acid residues 148-201 to have coiled-coil structure.

FIG. 45 illustrates the search motif results conducted on the humanlupus KU autoantigen protein P70. The ALLMOTI5 motif identified a singleregion at amino acid residues 229-280. The 107x178x4 motif identifiedone region at amino acid residues 235-292. The Lupas program predicted aregion at amino acid residues 232-267 to have coiled-coil structure.

FIG. 46 illustrates the search motif results conducted on the human zincfinger protein 10. The ALLMOTI5 motif identified a single region atamino acid residues 29-81. The 107x178x4 motif identified one region atamino acid residues 29-56. A P23LZIPC motif search found a single regionat amino acid residues 420-457. The Lupas program predicted nocoiled-coil regions.

26. EXAMPLE Potential Measles Virus DP178/DP107 Analogs: CD andAntiviral Characterization

In the Example presented herein, measles (MeV) virus DP178-like peptidesidentified by utilizing the computer-assisted search motifs described inthe Examples presented in Sections 9 and 21, above, are tested foranti-MeV activity. Additionally, circular dichroism (CD) structuralanalyses are conducted on the peptides, as discussed below. It isdemonstrated that several of the identified peptides exhibit potentantiviral capability. Additionally, it is shown that none of the thesepeptides exhibit a substantial helical character.

26.1 Materials and Methods

Structural analyses: The CD spectra were measured in a 10 mM sodiumphosphate, 150 mM sodium chloride, pH 7.0, buffer at approximately 10 mMconcentrations, using a 1 cm pathlength cell on a Jobin/YvonAutodichrograph Mark V CD spectrophotometer. Peptide concentrations weredetermined from A₂₈₀ using Edlehoch's method (1967, Biochemistry6:1948).

Anti-MeV antiviral activity syncytial reduction assay: The assayutilized herein tested the ability of the peptides to disrupt theability of Vero cells acutely infected with MeV (i.e., cells which areinfected with a multiplicity of infection of 2-3) to fuse and causesyncytial formation on a monolayer of an uninfected line of Vero cells.The more potent the peptide, the lower the observed level of fusion, thegreater the antiviral activity of the peptide.

Uninfected confluent monolayers of Vero cells were grown in microtiterwells in 10% FBS EMEM (Eagle Minimum Essential Medium w/o L-glutamine[Bio Whittaker Cat. No. 12-125F], with fetal bovine serum [FBS; whichhad been heat inactivated for 30 minutes at 56° C.; Bio Whittaker Cat.No. 14-501F) supplemented at 10%, antibiotics/antimycotics (BioWhittaker Cat. No. 17-602E) added at 1%, and glutamine added at 1%.

To prepare acutely infected Vero cells for addition to the uninfectedcells, cultures of acutely infected Vero cells were washed twice withHBSS .(Bio Whittaker Cat. No. 10-543F) and cell monolayers were removedwith trypsin (Bio Whittaker Cat. No. 17-161E). Once cells detached,media was added, any remaining clumps of cells were dispersed, andhemacytometer cell counts were performed.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Vero cells, then adding peptides (at thedilutions described below) in 10% FBS EMEM, and 50-100 acutelyMeV-infected Vero cells per well. Wells were then incubated at 37° C.for a maximum of 18 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed twice with water immediately, to remove excess stain and werethen allowed to dry. The number of syncytia per well were then counted,using a dissecting microscope.

Anti-MeV antiviral activity plaque reduction assay: The assay utilizedherein tested the ability of the peptides to disrupt the ability of MeVto infect permissive, uninfected Vero cells, leading to the infectedcells' fusing with uninfected cells to produce syncytia. The lower theobserved level of syncytial formation, the greater the antiviralactivity of the peptide.

Monolayers of uninfected Vero cells are grown as described above.

The antiviral assay was conducted by, first, removing all media from thewells containing uninfected Vero cells, then adding peptides (at thedilutions described below) in 10% FBS EMEM, and MeV stock virus at afinal concentration of 30 plaque forming units (PFU) per well. Wellswere then incubated at 37° C. for a minimum of 36 hours and a maximum of48 hours.

On day 2, after cells in control wells were checked for fusion centers,media was removed from the wells, followed by addition, to each well, ofapproximately 50 μl 0.25% Crystal Violet stain in methanol. Wells wererinsed twice with water immediately, to remove excess stain and werethen allowed to dry. The number of syncytia per well were then counted,using a dissecting microscope.

Peptides: The peptides characterized in the study presented herein werepeptides T-252A0 to T-256A0, T-257B1/C1, and T-258B1 to T-265B0, andT-266A0 to T-268A0, as shown in FIG. 47. These peptides represent a walkthrough the DP178-like region of the MeV fusion protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

26.2 Results

The data summarized in FIG. 47 represents antiviral and structuralinformation obtained via “peptide walks” through the DP178-like regionof the MeV fusion protein.

As shown in FIG. 47, the MeV DP178-like peptides exhibited a range ofantiviral activity as crude peptides. Several of these peptides werechosen for purification and further antiviral characterization. The IC₅₀values for such peptides were determined, as shown in FIG. 47, andranged from 1.35 μg/ml (T-257B1/C1) to 0.072 μg/ml (T-265B1). None ofthe DP178-like peptides showed, by CD analysis, a detectable level ofhelicity.

Thus, the computer assisted searches described, hereinabove, as in forexample, the Example presented in Section 9, for example, successfullyidentified viral peptide domains that represent highly promisinganti-MeV antiviral compounds.

27. EXAMPLE Potential SIV DP178/DP107 Analogs: AntiviralCharacterization

In the Example presented herein, simian immunodeficiency virus (SIV)DP178-like peptides identified by utilizing the computer-assisted searchmotifs described in the Examples presented in Sections 9, 12 and 19,above, were tested for anti-SIV activity. It is demonstrated thatseveral of the identified peptides exhibit potent antiviral capability.

27.1 Materials and Methods

Anti-SIV antiviral assays: The assay utilized herein were as reported inLangolis et al. (Langolis, A. J. et al., 1991, AIDS Research and HumanRetroviruses 7:713-720).

Peptides: The peptides characterized in the study presented herein werepeptides T-391 to T-400, as shown in FIG. 48. These peptides represent awalk through the DP178-like region of the SIV TM protein.

Each peptide was tested at 2-fold serial dilutions ranging from 100μg/ml to approximately 100 ng/ml. For each of the assays, a wellcontaining no peptide was also used.

27.2 Results

The data summarized in FIG. 48 represents antiviral information obtainedvia “peptide walks” through the DP178-like region of the SIV TM protein.

As shown in FIG. 48, peptides T-391 to T-400 were tested and exhibited apotent antiviral activity as crude peptides.

Thus, the computer assisted searches described, hereinabove, as in forexample, the Example presented in Section 9, for example, successfullyidentified viral peptide domains that represent highly promisinganti-SIV antiviral compounds.

28. EXAMPLE Anti-Viral Activity of DP107 and DP-178 Peptide Truncationsand Mutations

The Example presented in this Section represents a study of theantiviral activity of DP107 and DP178 truncations and mutations. It isdemonstrated that several of these DP107 and DP178 modified peptidesexhibit substantial antiviral activity.

28.1 Materials and Methods

Anti-HIV assavs: The antiviral assays performed were as those described,above, in Section 6.1. Assays utilized HIV-1/IIIb and/or HIV-2 NIHZisolates. Purified peptides were used, unless otherwise noted in FIGS.49A-C.

Peptides: The peptides characterized in the study presented herein were:

-   -   1) FIGS. 49A-C present peptides derived from the region around        and containing the DP178 region of the HIV-1 BRU isolate.        Specifically, this region spanned from gp41 amino acid residue        615 to amino acid residue 717. The peptides listed contain        truncations of this region and/or mutations which vary from the        DP178 sequence amino acid sequence. Further, certain of the        peptides have had amino- and/or carboxy-terminal groups either        added or removed, as indicated in the figures; and    -   2) FIG. 50. presents peptides which represent truncations of        DP107 and/or the gp41 region surrounding the DP107 amino acid        sequence of HIV-1 BRU isolate. Certain of the peptides are        unblocked or biotinylated, as indicated in the figure.

Blocked peptides contained an acyl N-terminus and an amido C-terminus.

28.2 Results

Anti-HIV antiviral data was obtained with the group 1 DP178-derivedpeptides listed in FIGS. 49A-C. The full-length, non-mutant DP178peptide (referred to in FIGS. 49A-C as T20) results shown are for 4ng/ml.

In FIG. 49A, a number of the DP178 truncations exhibited a high level ofantiviral activity, as evidenced by their low IC₅₀ values. Theseinclude, for example, test peptides T-50, T-624, T-636 to T-641, T-645to T-650, T-652 to T-654 and T-656. T-50 represents a test peptide whichcontains a point mutation, as indicated by the residue's shadedbackground. The HIV-1-derived test peptides exhibited a distinctstrain-specific antiviral activity, in that none of the peptides testedon the HIV-2 NIHZ isolate demonstrated appreciable antti-HIV-2 antiviralactivity.

Among the peptides listed in FIG. 49B, are test peptides representingthe amino (T-4) and carboxy (T-3) terminal halves of DP178 were tested.The amino terminal peptide was not active (IC₅₀>400 μg/ml) whereas thecarboxy terminal peptide showed potent antiviral activity (IC₅₀=3μg/ml). A number of additional test peptides also exhibited a high levelof antiviral activity. These included, for example, T-61/T-102, T-217 toT-221, T-235, T-381, T-677, T-377, T-590, T-378, T-591, T-271 to T-272,T-611, T-222 to T-223 and T-60/T-224. Certain of the antiviral peptidescontain point mutations and/or amino acid residue additions which varyfrom the DP178 amino acid sequence.

In FIG. 49C, point mutations and/or amino and/or carboxy-terminalmodifications are introduced into the DP178 amino acid sequence itself.As shown in the figure, the majority of the test peptides listed exhibitpotent antiviral activity.

Truncations of the DP107 peptide (referred to in IG. 50 as T21) werealso produced and tested, as shown in FIG. 50. FIG. 50 also presentsdata concerning blocked and unblocked peptides which contain additionalamino acid residues from the gp41 region in which the DP107 sequenceresides. Most of these peptides showed antiviral activity, as evidencedby their low IC₅₀ values.

Thus, the results presented in this Section demonstrate that not only dothe full length DP107 and DP178 peptides exhibit potent antiviralactivity, but truncations and/or mutant versions of these peptides canalso possess substantial antiviral character.

29: EXAMPLE Potential Epstein-Barr DP178/DP107 Analogs: AntiviralCharacterization

In the Example presented herein, peptides derived from the Epstein-Barr(EBV) DP-178/DP107 analog region of the Zebra protein identified, above,in the Example presented in Section 20 are described and tested foranti-EBV activity. It is demonstrated that among these peptides are oneswhich exhibit potential anti-viral activity.

29.1 Materials and Methods

Electrophoretic Mobility Shift Assays (EMSA): Briefly, an EBV Zebraprotein was synthesized utilizing SP6 RNA polymerase in vitrotranscription and wheat germ in vitro translation systems (PromegaCorporation recommendations; Butler, E. T. and Chamberlain, M. J., 1984,J. Biol. Chem. 257:5772; Pelham, H. R. B. and Jackson, R. J., 1976, Eur.J. Biochem. 67:247). The in vitro translated Zebra protein was thenpreincubated with increasing amounts of peptide up to 250 ng/ml prior tothe addition of 10,000 to 20,000 c.p.m. of a ³²P-labeled Zebra responseelement DNA fragment. After a 20 minute incubation in the presence ofthe response element, the reaction was analyzed on a 4% non-denaturingpolyacrylamide gel, followed by autoradiography, utilizing standardgel-shift procedures. The ability of a test peptide to prevent Zebrahomodimer DNA binding was assayed by the peptide's ability to abolishthe response element gel migration retardation characteristic of aprotein-bound nucleic acid molecule.

Peptides: The peptides characterized in this study represent peptidewalks through the region containing, and flanked on both sides by, theDP178/DP107 analog region identified in the Example presented in Section20, above, and shown as shown in FIG. 33. Specifically, the peptidewalks covered the region from amino acid residue 173 to amino acidresidue 246 of the EBV Zebra protein.

Each of the tested peptides were analyzed at a range of concentrations,with 150 ng/ml being the lowest concentration at which any of thepeptides exerted an inhibitory effect.

29.2 Results

The EBV Zebra protein transcription factor contains a DP178/pP107 analogregion, as demonstrated in the Example presented, above, in Section 20.This protein appears to be the primary factor responsible for thereactivation capability of the virus. A method by which the DNA-bindingfunction of the Zebra virus may be abolished may, therefore, representan effective antiviral technique. In order to identify potentialanti-EBV DP178/DP107 peptides, therefore, peptides derived from theregion identified in Section 20, above, were tested for their ability toinhibit Zebra protein DNA binding.

The test peptides' ability to inhibit Zebra protein DNA binding wasassayed via the EMSA assays described, above, in Section 28.1. The datasummarized in FIGS. 51A-B presents the results of EMSA assays of thelisted EBV test peptides. These peptides represent one amino acid“walks” through the region containing, and flanked on both sides by, theDP178/DP107 analog region identified in the Example presented in Section20, above, and shown as shown in FIG. 33. As shown in FIGS. 51A-B, theregion from which these peptides are derived lies from EBV Zebra proteinamino acid residue 173 to 246. A number of the test peptides which wereassayed exhibited an ability to inhibit Zebra protein homodimer DNAbinding, including 439, 441, 444 and 445.

Those peptides which exhibit an ability to inhibit Zebra protein DNAbinding represent potential anti-EBV antiviral compounds whose abilityto inhibit EBV infection can be further characterized.

The present invention is not to be limited in scope by the specificembodiments described which are intended as single illustrations ofindividual aspects of the invention, and functionally equivalent methodsand components are within the scope of the invention. Indeed, variousmodifications of the invention, in addition to those shown and describedherein will become apparent to those skilled in the art from theforegoing description and accompanying drawings. Such modifications areintended to fall within the scope of the appended claims.

1. A method for the inhibition of transmission of a parainfluenza virusto a cell, comprising contacting the cell with an effectiveconcentration of an isolated peptide consisting of an amino acidsequence of a 16 to 39 amino acid residue region of a parainfluenzavirus protein for an effective period of time; wherein said region isidentified by an ALLMOTI15, 107x178x4, or PLZIP sequence search motif;wherein said peptide further comprises an amino terminal X, and acarboxy terminal Z in which: X comprises an amino group, an acetylgroup, a 9-fluorenylmethoxy-carbonyl group, a hydrophobic group, or amacromolecular carrier group; and Z comprises a carboxyl group, an amidogroup, a hydrophobic group, or a macromolecular carrier group; andwherein fusion of the virus to the cell is inhibited.
 2. A method forthe inhibition of transmission of parainfluenza virus to a cell,comprising contacting the cell with an effective concentration of apeptide for an effective period of time; wherein the peptide has theformula: X-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRSN-Z (SEQ ID NO. 33);X-LNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQ-Z (SEQ ID NO. 34);X-NNSVALDPIDISIELNKAKSDLEESKEWIRRSNQK-Z (SEQ ID NO. 35);X-NSVALDPIDISIELNKAKSDLEESKEWIRRSNQKL-Z (SEQ ID NO. 36);X-SVALDPIDISIELNKAKSDLEESKEWIRRSNQKLD-Z (SEQ ID NO. 37);X-VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDS-Z (SEQ ID NO. 38);X-ALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI-Z (SEQ ID NO. 39);X-LDPIDISIELNKAKSDLEESKEWIRRSNQKLDSIG-Z (SEQ ID NO. 40);X-DPIDISIELNKAKSDLEESKEWIRRSNQKLDSIGN-Z (SEQ ID NO. 41);X-PIDISIELNKAKSDLEESKEWIRRSNQKLDSIGNW-Z (SEQ ID NO. 42);X-IDISIELNKAKSDLEESKEWIRRSNQKLDSIGNWH-Z (SEQ ID NO. 43);X-DISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQ-Z (SEQ ID NO. 44);X-ISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQS-Z (SEQ ID NO. 45);X-SIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSS-Z (SEQ ID NO. 46);X-IELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSST-Z (SEQ ID NO. 47);X-ELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSSTT-Z (SEQ ID NO. 48);X-TAAVALVEAKQARSDIEKLKEAIRDTNKAVQSVQS-Z (SEQ ID NO. 49);X-AVALVEAKQARSDIEKLKEAIRDTNKAVQSVQSSI-Z (SEQ ID NO. 50);X-LVEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNL-Z (SEQ ID NO. 51);X-VEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLI-Z (SEQ ID NO. 52);X-EAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIV-Z (SEQ ID NO. 53);X-AKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVA-Z (SEQ ID NO. 54);X-KQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAI-Z (SEQ ID NO. 55);X-QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIK-Z (SEQ ID NO. 56);X-ARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKS-Z (SEQ ID NO. 57);X-RSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSV-Z (SEQ ID NO. 58);X-SDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQ-Z (SEQ ID NO. 59);X-KLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVN-Z (SEQ ID NO. 60);X-LKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNK-Z (SEQ ID NO. 61); orX-AIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIV-Z (SEQ ID NO. 62),  in which:amino acid residues are presented by the single-letter code; X comprisesan amino group, an acetyl group, a 9-fluorenylmethoxy-carbonyl group, ahydrophobic group, or a macromolecular carrier group; Z comprises acarboxyl group, an amido group, a hydrophobic group, or a macromolecularcarrier group; and wherein fusion of the virus to the cell is inhibited.3. The method of claim 2, wherein the peptide has the formula:X-IDISIELNKAKSDLEESKEWIRRSNQKLDSIGNWH-Z (SEQ ID NO. 43).
 4. The methodof claim 2, wherein the peptide has the formula:X-TLNNSVALDPIDISIELNKAKSDLEESKEWIRRSN-Z (SEQ ID NO. 33).
 5. The methodof claim 2, wherein the peptide has the formula:X-LNNSVALDPIDISIELNKAKSDLEESKEWIRRSNQ-Z (SEQ ID NO. 34).
 6. The methodof claim 2, wherein the peptide has the formula:X-NNSVALDPIDISIELNKAKSDLEESKEWIRRSNQK-Z (SEQ ID NO. 35).
 7. The methodof claim 2, wherein the peptide has the formula:X-NSVALDPIDISIELNKAKSDLEESKEWIRRSNQKL-Z (SEQ ID NO. 36).
 8. The methodof claim 2, wherein the peptide has the formula:X-SVALDPIDISIELNKAKSDLEESKEWIRRSNQKLD-Z (SEQ ID NO. 37).
 9. The methodof claim 2, wherein the peptide has the formula:X-VALDPIDISIELNKAKSDLEESKEWIRRSNQKLDS-Z (SEQ ID NO. 38).
 10. The methodof claim 2, wherein the peptide has the formula:X-ALDPIDISIELNKAKSDLEESKEWIRRSNQKLDSI-Z (SEQ ID NO. 39).
 11. The methodof claim 2, wherein the peptide has the formula:X-LDPIDISIELNKAKSDLEESKEWIRRSNQKLDSIG-Z (SEQ ID NO. 40).
 12. The methodof claim 2, wherein the peptide has the formula:X-DPIDISIELNKAKSDLEESKEWIRRSNQKLDSIGN-Z (SEQ ID NO. 41).
 13. The methodof claim 2, wherein the peptide has the formula:X-PIDISIELNKAKSDLEESKEWIRRSNQKLDSIGNW-Z (SEQ ID NO. 42).
 14. The methodof claim 2, wherein the peptide has the formula:X-DISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQ-Z (SEQ ID NO. 44).
 15. The methodof claim 2, wherein the peptide has the formula:X-ISIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQS-Z (SEQ ID NO. 45).
 16. The methodof claim 2, wherein the peptide has the formula:X-SIELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSS-Z (SEQ ID NO. 46).
 17. The methodof claim 2, wherein the peptide has the formula:X-IELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSST-Z (SEQ ID NO. 47).
 18. The methodof claim 2, wherein the peptide has the formula:X-ELNKAKSDLEESKEWIRRSNQKLDSIGNWHQSSTT-Z (SEQ ID NO. 48).
 19. The methodof claim 2, wherein the peptide has the formula:X-TAAVALVEAKQARSDIEKLKEAIRDTNKAVQSVQS-Z (SEQ ID NO. 49).
 20. The methodof claim 2, wherein the peptide has the formula:X-AVALVEAKQARSDIEKLKEAIRDTNKAVQSVQSSI-Z (SEQ ID NO. 50).
 21. The methodof claim 2, wherein the peptide has the formula:X-LVEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNL-Z (SEQ ID NO. 51).
 22. The methodof claim 2, wherein the peptide has the formula:X-VEAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLI-Z (SEQ ID NO. 52).
 23. The methodof claim 2, wherein the peptide has the formula:X-EAKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIV-Z (SEQ ID NO. 53).
 24. The methodof claim 2, wherein the peptide has the formula:X-AKQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVA-Z (SEQ ID NO. 54).
 25. The methodof claim 2, wherein the peptide has the formula:X-KQARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAI-Z (SEQ ID NO. 55).
 26. The methodof claim 2, wherein the peptide has the formula:X-QARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIK-Z (SEQ ID NO. 56).
 27. The methodof claim 2, wherein the peptide has the formula:X-ARSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKS-Z (SEQ ID NO. 57).
 28. The methodof claim 2, wherein the peptide has the formula:X-RSDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSV-Z (SEQ ID NO. 58).
 29. The methodof claim 2, wherein the peptide has the formula:X-SDIEKLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQ-Z (SEQ ID NO. 59).
 30. The methodof claim 2, wherein the peptide has the formula:X-KLKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVN-Z (SEQ ID NO. 60).
 31. The methodof claim 2, wherein the peptide has the formula:X-LKEAIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNK-Z (SEQ ID NO. 61).
 32. The methodof claim 2, wherein the peptide has the formula:X-AIRDTNKAVQSVQSSIGNLIVAIKSVQDYVNKEIV-Z (SEQ ID NO. 62).
 33. The methodof claim 1, wherein the region of the parainfluenza virus protein is aregion of 28 amino acid residues identified by the ALLMOTI5 motif. 34.The method of claim 1, wherein the region of the parainfluenza virusprotein is a region of 35 amino acid residues identified by the ALLMOTI5motif.
 35. The method of claim 1, wherein the region of theparainfluenza virus protein is a region of 28 amino acid residuesidentified by the 107x178x4 motif.
 36. The method of claim 1, whereinthe region of the parainfluenza virus protein is a region of 35 aminoacid residues identified by the 107x178x4 motif.
 37. The method of claim1, wherein the region of the parainfluenza virus protein is identifiedby a PLZIP motif.
 38. The method of claim 1 wherein X is an acetylgroup.
 39. The method of claim 1 wherein Z is an amido group.
 40. Themethod of claim 1 wherein X is an acetyl group; and Z is an amido group.41. The method of claim 1 wherein X is a macromolecular carrier group.42. The method of claim 41 wherein the macromolecular carrier group X isa peptide group.
 43. The method of claim 42 wherein the peptide group is2 to 50 parainfluenza virus protein amino acid residues amino to theregion of the parainfluenza virus protein identified by the ALLMOTI5,107x178x4 or PLZIP sequence search motif.
 44. The method of claim 1wherein Z is a macromolecular carrier group.
 45. The method of claim 44wherein the macromolecular carrier group Z is a peptide group.
 46. Themethod of claim 45 wherein the peptide group is about 2 to about 50parainfluenza virus protein amino acid residues carboxy to the region ofthe parainfluenza virus protein identified by the ALLMOTI5, 107x178x4 orPLZIP sequence search motif.
 47. The method of claim 46 wherein X is amacromolecular carrier group, said macromolecular carrier group X beinga peptide group of 2 to 50 parainfluenza virus protein amino acidresidues amino to the region of the parainfluenza virus proteinidentified by the ALLMOTI5, 107x 178x4 or PLZIP sequence search motif.48. The method of claim 2 wherein X is an acetyl group.
 49. The methodof claim 2 wherein Z is an amido group.
 50. The method of claim 2wherein X is an acetyl group; and Z is an amido group.